60s ribosomal protein l13, snap_masked-scaffold1087_size63509-processed-gene-0.8 (gene) Tigriopus kingsejongensis

Overview
Name60s ribosomal protein l13
Unique Namesnap_masked-scaffold1087_size63509-processed-gene-0.8
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of 60s ribosomal protein l13 vs. L. salmonis genes
Match: EMLSAG00000010355 (supercontig:LSalAtl2s:LSalAtl2s686:210130:211756:1 gene:EMLSAG00000010355 transcript:EMLSAT00000010355 description:"maker-LSalAtl2s686-augustus-gene-1.30")

HSP 1 Score: 320.087 bits (819), Expect = 9.026e-113
Identity = 156/211 (73.93%), Postives = 185/211 (87.68%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKTLRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSKPGK 211
            MPSKRNQMVPN HFHKDWQRYVKTWFNQPAR  RRR+AR+ KA+ ++PRP+++ RPVVRCPT +YN+K R+GRGFTLEELKAAGL+K  AQTIGISVDHRRRNKSVESLQ N QRLKEY+SKLILFPI + KPR GD++ E+IKKA+Q  G + P+  + KR +AM +TDD+KKFKAF++IRQARAVARLWGIRAKKA++AEADD+SKP K
Sbjct:    1 MPSKRNQMVPNEHFHKDWQRYVKTWFNQPARKERRRKARMAKASKISPRPMESFRPVVRCPTNRYNVKSRIGRGFTLEELKAAGLAKKYAQTIGISVDHRRRNKSVESLQYNVQRLKEYQSKLILFPIKANKPRKGDSTPEEIKKATQFVGTVSPVAKSGKRVKAMEVTDDLKKFKAFHSIRQARAVARLWGIRAKKAREAEADDMSKPKK 211
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BLAST of 60s ribosomal protein l13 vs. SwissProt
Match: gi|21759388|sp|Q90Z10.3|RL13_DANRE (RecName: Full=60S ribosomal protein L13)

HSP 1 Score: 241.891 bits (616), Expect = 1.918e-80
Identity = 127/209 (60.77%), Postives = 161/209 (77.03%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKT-LRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSK 208
            M   RN M+ N HFHKDWQ+ V+TWFNQPAR  RRR+AR  KA  +APRPV   LRPVVRCPT +Y+ K R GRGFTLEELKAAG++K  A+TIGISVD RRRN+S ESLQAN QRLKEY++KLI+FP  + KP+ GD++ E++K A+QL G +MP++   K+ +A  I++D K FKAF ++R ARA ARL+GIRAK+AK+A   D+ K
Sbjct:    1 MAPSRNGMILNPHFHKDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPVSGPLRPVVRCPTIRYHTKVRAGRGFTLEELKAAGINKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKGDSTEEELKMATQLTGPVMPIKKVHKKEKARVISEDEKNFKAFASLRMARANARLFGIRAKRAKEAAEQDVEK 209
[Close]
BLAST of 60s ribosomal protein l13 vs. SwissProt
Match: gi|730528|sp|P41126.1|RL13_DROME (RecName: Full=60S ribosomal protein L13; AltName: Full=BBC1 protein homolog)

HSP 1 Score: 237.269 bits (604), Expect = 1.831e-78
Identity = 126/211 (59.72%), Postives = 156/211 (73.93%), Query Frame = 0 
Query:    3 SKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVK-TLRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAM---PITDDMKKFKAFNTIRQARAVARLWGIRAKKAKD-AEADDLSK 208
             K N M+PN H+HK WQR+VKTWFNQPAR  RR   RV KA +V PRP    LRPVVRCPT +Y+ K R GRGFTLEELK AG+    A+TIGI+VD RR+NKS+ES Q N QRLKEY+SKLILFPIN +K RAG++S E+ K A+QL G ++P  I  ++P  +    +T D KKFKAF T+R+AR  ARL GIRAK+AK+ AE++D +K
Sbjct:    2 GKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRCPTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLATQLKGPVLP--IKNEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRAKRAKEAAESEDAAK 210
[Close]
BLAST of 60s ribosomal protein l13 vs. SwissProt
Match: gi|21759387|sp|Q90YV5.3|RL13_ICTPU (RecName: Full=60S ribosomal protein L13)

HSP 1 Score: 235.728 bits (600), Expect = 4.531e-78
Identity = 125/209 (59.81%), Postives = 156/209 (74.64%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKT-LRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSK 208
            M   RN M+ N HFHKDWQ+ V+TWFNQPAR  RRR+AR  KA  +APRPV   LRP+VRCPT +YN K R GRGFTLEELKAAG++K  A+TIGI+VD RRRN+S ESL  N QRLK Y+SKLILFP     P+ GD++ E++K A+QL G +MP++I  K+ +A  IT++ KKF AF  +R ARA ARL+GIRAK+AK+A   D+ K
Sbjct:    1 MAPSRNGMILNPHFHKDWQKRVRTWFNQPARKLRRRKARQAKARRIAPRPVAGPLRPIVRCPTVRYNTKVRAGRGFTLEELKAAGINKRVARTIGIAVDPRRRNRSTESLHVNVQRLKVYRSKLILFPRKVSAPKKGDSTEEEVKMATQLTGPVMPIKIVHKKEKARMITEEEKKFNAFANLRMARANARLFGIRAKRAKEAAEQDVEK 209
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BLAST of 60s ribosomal protein l13 vs. SwissProt
Match: gi|21903462|sp|P26373.4|RL13_HUMAN (RecName: Full=60S ribosomal protein L13; AltName: Full=Breast basic conserved protein 1; AltName: Full=Large ribosomal subunit protein eL13)

HSP 1 Score: 233.417 bits (594), Expect = 4.544e-77
Identity = 126/209 (60.29%), Postives = 155/209 (74.16%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKT-LRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSK 208
            M   RN MV   HFHKDWQR V TWFNQPAR  RRR+AR  KA  +APRP    +RP+VRCPT +Y+ K R GRGF+LEEL+ AG+ K  A+TIGISVD RRRNKS ESLQAN QRLKEY+SKLILFP     P+ GD+SAE++K A+QL G +MP++   K+ +A  IT++ K FKAF ++R ARA ARL+GIRAK+AK+A   D+ K
Sbjct:    1 MAPSRNGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAEQDVEK 209
[Close]
BLAST of 60s ribosomal protein l13 vs. SwissProt
Match: gi|75060396|sp|Q56JZ1.3|RL13_BOVIN (RecName: Full=60S ribosomal protein L13)

HSP 1 Score: 233.032 bits (593), Expect = 5.014e-77
Identity = 126/209 (60.29%), Postives = 154/209 (73.68%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKT-LRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSK 208
            M   RN M+   HFHKDWQR V TWFNQPAR  RRR+AR  KA  +APRP    LRPVVRCPT +Y+ K R GRGF+LEEL+ AG+ K  A+TIGISVD RRRNK  ESLQAN QRLKEY+SKLILFP     P+ GD+SAE++K A+QL G +MP++   K+ +A  IT++ K FKAF ++R ARA ARL+GIRAK+AK+A   D+ K
Sbjct:    1 MAPSRNGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPLRPVVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKCTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAEQDVEK 209
[Close]
BLAST of 60s ribosomal protein l13 vs. SwissProt
Match: gi|730529|sp|P41123.2|RL13_RAT (RecName: Full=60S ribosomal protein L13)

HSP 1 Score: 232.646 bits (592), Expect = 8.288e-77
Identity = 124/209 (59.33%), Postives = 155/209 (74.16%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKT-LRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSK 208
            M   RN M+   HFHKDWQ+ V TWFNQPAR  RRR+AR  KA  +APRP    +RP+VRCPT +Y+ K R GRGF+LEEL+ AG+ K  A+TIGISVD RRRNKS ESLQAN QRLKEY+SKLILFP     P+ GD+SAE++K A+QL G +MP++   K+ +A  IT++ K FKAF ++R ARA ARL+GIRAK+AK+A   D+ K
Sbjct:    1 MAPSRNGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKMARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRNVYKKEKARAITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAEQDVEK 209
[Close]
BLAST of 60s ribosomal protein l13 vs. SwissProt
Match: gi|730527|sp|P41125.2|RL13_CHICK (RecName: Full=60S ribosomal protein L13; AltName: Full=Breast basic conserved protein 1)

HSP 1 Score: 232.646 bits (592), Expect = 9.980e-77
Identity = 126/209 (60.29%), Postives = 156/209 (74.64%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKT-LRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSK 208
            M   RN M+   HFHKDWQR V TWFNQPAR  RRR+AR  KA  +APRPV   +RP+VRCPT +Y+ K R GRGF+LEELK AG++K  A+TIGISVD RRRNKS ESLQAN QRLKEY+SKLILFP     P+ GD+S E++K A+QL G +MP++   KR +A  I+++ K FKAF ++R ARA ARL+GIRAK+AK+A   D+ K
Sbjct:    1 MAPSRNGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPVAGPIRPIVRCPTVRYHKKVRAGRGFSLEELKLAGINKRFARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSPEELKMATQLSGPVMPIRNVFKREKARVISEEEKNFKAFASLRMARANARLFGIRAKRAKEAAEQDVEK 209
[Close]
BLAST of 60s ribosomal protein l13 vs. SwissProt
Match: gi|21759389|sp|Q962U1.1|RL13_SPOFR (RecName: Full=60S ribosomal protein L13)

HSP 1 Score: 232.261 bits (591), Expect = 1.800e-76
Identity = 121/209 (57.89%), Postives = 155/209 (74.16%), Query Frame = 0 
Query:    3 SKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKT-LRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDA--EADDLSK 208
             K N M+PN HFHKDWQR+VKTWFNQPAR  RR++ R+ KA +VAPRP    LRPVVRCPT +Y+ K R GRGFTL E++AAGL+   A+TIGI+VD RRRNKSVESLQ N QRLKEY+++LILFP   +K   G+A+ E+ K A+QL G +MP+Q    +  A  IT++ K FKA+  +R AR++A+L GIRAK+ KDA    DD++K
Sbjct:    2 GKGNNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIKKAKAVAPRPAAGPLRPVVRCPTIRYHTKVRAGRGFTLREIRAAGLNPAFARTIGIAVDPRRRNKSVESLQVNVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSIARAITEEEKDFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 209
[Close]
BLAST of 60s ribosomal protein l13 vs. SwissProt
Match: gi|21903465|sp|P47963.3|RL13_MOUSE (RecName: Full=60S ribosomal protein L13; AltName: Full=A52)

HSP 1 Score: 231.491 bits (589), Expect = 2.392e-76
Identity = 124/209 (59.33%), Postives = 155/209 (74.16%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKT-LRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSK 208
            M   RN M+   HFHKDWQ+ V TWFNQPAR  RRR+AR  KA  +APRP    +RP+VRCPT +Y+ K R GRGF+LEEL+ AG+ K  A+TIGISVD RRRNKS ESLQAN QRLKEY+SKLILFP     P+ GD+SAE++K A+QL G +MP++   K+ +A  IT++ K FKAF ++R ARA ARL+GIRAK+AK+A   D+ K
Sbjct:    1 MAPSRNGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAEQDVEK 209
[Close]
BLAST of 60s ribosomal protein l13 vs. SwissProt
Match: gi|6831614|sp|Q9Z313.3|RL13_CRIGR (RecName: Full=60S ribosomal protein L13)

HSP 1 Score: 229.18 bits (583), Expect = 2.080e-75
Identity = 124/209 (59.33%), Postives = 154/209 (73.68%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKT-LRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSK 208
            M   RN M+   HFHKDWQR V TWFNQPAR  RRR+AR  KA  +APRP    +RP+VRCPT +Y+ K R GRGF+LEEL+ AG+ K  A+TIGISVD RRRNKS ESLQAN QRLKEY+SKLILFP     P+ GD+SAE++K A+QL G +M ++   K+ +A  IT++ K FKAF ++R ARA ARL+GIRAK+AK+A   D+ K
Sbjct:    1 MAPSRNGMILKPHFHKDWQRRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMRIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAEQDVEK 209
[Close]
BLAST of 60s ribosomal protein l13 vs. nr
Match: gi|961375752|gb|ALS04620.1| (60S ribosomal protein L13 [Pseudodiaptomus poplesia])

HSP 1 Score: 331.257 bits (848), Expect = 3.162e-113
Identity = 156/208 (75.00%), Postives = 176/208 (84.62%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKTLRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSK 208
            MP+K NQMVPN HFHKDWQRYVKTWFNQP R  RR+++RV KAA VAPRP+K LRP V CPTFKYNIK+R GRGFTLEELKAAG+SKG AQT+GISVDHRRRNKSVESLQAN QRLKEYKSKLILFP+NS+KP+ G+A+AE++ KA QL G IMPL+  TKR RAM ITDD+K FKAF  IRQARA  RL G R K+A DAE DD++K
Sbjct:    1 MPAKGNQMVPNGHFHKDWQRYVKTWFNQPGRKIRRKKSRVAKAAKVAPRPLKRLRPEVTCPTFKYNIKKRAGRGFTLEELKAAGMSKGMAQTVGISVDHRRRNKSVESLQANVQRLKEYKSKLILFPLNSKKPKKGEATAEEVSKAVQLAGEIMPLKTVTKRERAMVITDDLKNFKAFQAIRQARAYKRLHGARMKRAADAEGDDITK 208
[Close]
BLAST of 60s ribosomal protein l13 vs. nr
Match: gi|961376218|gb|ALS04853.1| (60S ribosomal protein L13 [Pseudodiaptomus poplesia])

HSP 1 Score: 330.102 bits (845), Expect = 7.194e-113
Identity = 156/208 (75.00%), Postives = 175/208 (84.13%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKTLRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSK 208
            MP+K NQMVPN HFHKDWQRYVKTWFNQP R  RR++ RV KAA VAPRP+K LRP V CPTFKYNIK+R GRGFTLEELKAAG+SKG AQT+GISVDHRRRNKSVESLQAN QRLKEYKSKLILFP+NS+KP+ G+A+AE++ KA QL G IMPL+  TKR RAM ITDD+K FKAF  IRQARA  RL G R K+A DAE DD++K
Sbjct:    1 MPAKGNQMVPNGHFHKDWQRYVKTWFNQPGRKIRRKKGRVAKAAKVAPRPLKRLRPEVTCPTFKYNIKKRAGRGFTLEELKAAGMSKGMAQTVGISVDHRRRNKSVESLQANVQRLKEYKSKLILFPLNSKKPKKGEATAEEVSKAVQLAGEIMPLKTVTKRERAMVITDDLKNFKAFQAIRQARAYKRLHGARMKRAADAEGDDITK 208
[Close]
BLAST of 60s ribosomal protein l13 vs. nr
Match: gi|961376250|gb|ALS04869.1| (60S ribosomal protein L13 [Pseudodiaptomus poplesia])

HSP 1 Score: 328.176 bits (840), Expect = 4.486e-112
Identity = 155/208 (74.52%), Postives = 175/208 (84.13%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKTLRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSK 208
            MP+K NQMVPN HFHKDWQRYVKTWFNQP R  RR+++RV KAA VAPRP+K LRP V CPTFKYNIK+R GRGFTLEELKAAG+SKG AQT+GISVDHRRRNKSVESLQAN QRLKEYKSKLILFP+NS+KP+ G+A+AE++ KA QL G IMPL+  TKR RAM ITDD+K FKAF  IRQARA  RL G R K+A DAE D ++K
Sbjct:    1 MPAKGNQMVPNGHFHKDWQRYVKTWFNQPGRKIRRKKSRVAKAAKVAPRPLKRLRPEVTCPTFKYNIKKRAGRGFTLEELKAAGMSKGMAQTVGISVDHRRRNKSVESLQANVQRLKEYKSKLILFPLNSKKPKKGEATAEEVSKAVQLAGEIMPLKTVTKRERAMVITDDLKNFKAFQAIRQARAYKRLHGARMKRAADAEGDGITK 208
[Close]
BLAST of 60s ribosomal protein l13 vs. nr
Match: gi|290561304|gb|ADD38054.1| (60S ribosomal protein L13 [Lepeophtheirus salmonis])

HSP 1 Score: 320.087 bits (819), Expect = 8.641e-109
Identity = 156/211 (73.93%), Postives = 186/211 (88.15%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKTLRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSKPGK 211
            MPSKRNQMVPN HFHKDWQRYVKTWFNQPAR  RRR+AR+ KA+ ++PRP+++LRPVVRCPT +YN+K R+GRGFTLEELKAAGL+K  AQTIGISVDHRRRNKSVESLQ N QRLKEY+SKLILFPI + KPR GD++ E+IK+A+Q  G + P+  + KR +AM +TDD+KKFKAF++IRQARAVARLWGIRAKKA++AEADD+SKP K
Sbjct:    1 MPSKRNQMVPNEHFHKDWQRYVKTWFNQPARKERRRKARMAKASKISPRPMESLRPVVRCPTNRYNVKSRIGRGFTLEELKAAGLAKKYAQTIGISVDHRRRNKSVESLQYNVQRLKEYQSKLILFPIKANKPRKGDSTPEEIKEATQFVGTVSPVAKSGKRVKAMEVTDDLKKFKAFHSIRQARAVARLWGIRAKKAREAEADDMSKPKK 211
[Close]
BLAST of 60s ribosomal protein l13 vs. nr
Match: gi|225713374|gb|ACO12533.1| (60S ribosomal protein L13 [Lepeophtheirus salmonis])

HSP 1 Score: 318.931 bits (816), Expect = 2.145e-108
Identity = 156/211 (73.93%), Postives = 185/211 (87.68%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKTLRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSKPGK 211
            MPSKRNQMVPN HFHKDWQRYVKTWFNQPAR  RRR+AR+ KA+ ++PRP+++LRPVVRCPT +YN+K R+GRGFTLEELKAAGL+K  AQTIGISVDHRRRNKSVESLQ N QRLKEY+SKLIL PI + KPR GD++ E+IKKA+Q  G + P+  + KR +AM +TDD+KKFKAF++IRQARAVARLWGIRAKKA++AEADD+SKP K
Sbjct:    1 MPSKRNQMVPNEHFHKDWQRYVKTWFNQPARKERRRKARMAKASKISPRPMESLRPVVRCPTNRYNVKSRIGRGFTLEELKAAGLAKKYAQTIGISVDHRRRNKSVESLQYNVQRLKEYQSKLILLPIKANKPRKGDSTPEEIKKATQFVGTVSPVAKSGKRVKAMEVTDDLKKFKAFHSIRQARAVARLWGIRAKKAREAEADDMSKPKK 211
[Close]
BLAST of 60s ribosomal protein l13 vs. nr
Match: gi|1325310469|ref|XP_023336843.1| (60S ribosomal protein L13-like [Eurytemora affinis])

HSP 1 Score: 316.235 bits (809), Expect = 2.874e-107
Identity = 152/208 (73.08%), Postives = 172/208 (82.69%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKTLRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSK 208
            MPSK NQ++PN HFHKDWQ+YVKTWFNQPAR  RRR  RV KAA VAPRP+  LRPVV CPTFKYNIKQR GRGFTLEE+KAAG SK  A+T+GI+VD RRRNKSVESLQ N QRLKEYKSK+ILFP+NS+KP+ GDA+ E+I KA+QL G +MP +   KR RAMPITDDMK FKAF  IRQARA  RL G+R KKA DAEAD++SK
Sbjct:    1 MPSKGNQLIPNGHFHKDWQKYVKTWFNQPARKIRRRENRVAKAALVAPRPLTKLRPVVACPTFKYNIKQRAGRGFTLEEIKAAGFSKNIARTMGIAVDFRRRNKSVESLQLNAQRLKEYKSKMILFPLNSKKPKKGDATPEEISKATQLSGEVMPPKRVVKRIRAMPITDDMKNFKAFQAIRQARAYKRLHGMRLKKAADAEADEISK 208
[Close]
BLAST of 60s ribosomal protein l13 vs. nr
Match: gi|961374522|gb|ALS04005.1| (60S ribosomal protein L13, partial [Acartia pacifica])

HSP 1 Score: 309.301 bits (791), Expect = 1.365e-104
Identity = 146/207 (70.53%), Postives = 169/207 (81.64%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKTLRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLS 207
            MPSK NQ+VPN HFHKDWQRYVKTWFNQPAR  RRR+ R+ KAA +APRP+  L PVVRCPT KYNIKQR+GRGFTLEE+KAAGL K QA ++GI+VDHRRRN+S+ESLQ NTQRLKEY+SK+IL+P+N +KP+ GDA+AE+I KA+QL G IMPL+       +M ITDDM  FKAF  IRQARA  RL G R KKA DAEADDLS
Sbjct:    1 MPSKGNQLVPNGHFHKDWQRYVKTWFNQPARKIRRRQNRITKAAKIAPRPLSKLHPVVRCPTLKYNIKQRMGRGFTLEEVKAAGLCKRQAMSLGIAVDHRRRNRSMESLQLNTQRLKEYQSKMILYPLNPKKPKKGDATAEEISKATQLAGAIMPLKKQAPVVESMAITDDMTNFKAFQAIRQARAYKRLHGYRIKKAADAEADDLS 207
[Close]
BLAST of 60s ribosomal protein l13 vs. nr
Match: gi|926631936|ref|XP_013781715.1| (60S ribosomal protein L13-like [Limulus polyphemus])

HSP 1 Score: 274.633 bits (701), Expect = 9.003e-91
Identity = 142/215 (66.05%), Postives = 167/215 (77.67%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKT-LRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDL--SKPGKK 212
            M  KRN MVPN HFHK WQRYVKTWFNQP R  RR   RV KA  +APRPV   LRP+VRCPT +YN K RLGRGFTLEELKAAG+ K +AQTIGI+VD+RR+NKSVESLQ N QRLKEY+SKLILFP N  KPR GD+SAE+IK A+QL G +MP+    +R +A  +T++ KKFKAF  +RQAR+ ARLWG+R KKAK+A A++L  S P KK
Sbjct:    1 MAPKRNNMVPNGHFHKYWQRYVKTWFNQPMRKKRRHDRRVKKAHMIAPRPVGGPLRPIVRCPTIRYNNKIRLGRGFTLEELKAAGIHKREAQTIGIAVDYRRQNKSVESLQQNVQRLKEYRSKLILFPKNMSKPRKGDSSAEEIKMATQLSGVVMPVSQPIRREKARVLTEEDKKFKAFVALRQARSHARLWGMRQKKAKEA-AEELMASAPKKK 214
[Close]
BLAST of 60s ribosomal protein l13 vs. nr
Match: gi|671758370|gb|AII97595.1| (BLTX199 [Nephila pilipes])

HSP 1 Score: 268.085 bits (684), Expect = 3.041e-88
Identity = 137/215 (63.72%), Postives = 164/215 (76.28%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKT-LRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTK---RPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDAEADDLSKPGK 211
            M  KRN M+PN HFHKDWQR+VKTWFNQP R  RR   RV KA ++APRP K  +RPVVRCP+F+Y+ KQRLGRGFTLEELKAAG+ K QA+TIGISVDHRR+NKSVESLQ N QRLK YKSKLILFP    KPR GDA+AE+IK A+QL G +MP++   K   +PR    T++ KKF+A+ T+R AR+ ARLWG+R KKAK+A     + P K
Sbjct:    1 MAPKRNNMIPNGHFHKDWQRFVKTWFNQPMRKKRRHNTRVQKARAIAPRPAKGPIRPVVRCPSFRYHTKQRLGRGFTLEELKAAGIHKKQARTIGISVDHRRKNKSVESLQRNVQRLKIYKSKLILFPHKLAKPRKGDATAEEIKMATQLQGVVMPIKRHVKHVEKPRK--PTEEEKKFQAYATLRNARSEARLWGMRQKKAKEAAESLEAGPKK 213
[Close]
BLAST of 60s ribosomal protein l13 vs. nr
Match: gi|957840793|ref|XP_014670713.1| (PREDICTED: 60S ribosomal protein L13-like [Priapulus caudatus])

HSP 1 Score: 267.7 bits (683), Expect = 4.754e-88
Identity = 132/210 (62.86%), Postives = 161/210 (76.67%), Query Frame = 0 
Query:    1 MPSKRNQMVPNAHFHKDWQRYVKTWFNQPARAARRRRARVVKAASVAPRPVKTLRPVVRCPTFKYNIKQRLGRGFTLEELKAAGLSKGQAQTIGISVDHRRRNKSVESLQANTQRLKEYKSKLILFPINSQKPRAGDASAEDIKKASQLGGRIMPLQITTKRPRAMPITDDMKKFKAFNTIRQARAVARLWGIRAKKAKDA-EADDLSKP 209
            MP KRN ++ N HFHKDWQRYVKTWFNQPAR  RR  +RV KA +VAPRP+ +LRP VRCPTF+YN + R GRGF+LEELKAAG+SK  A TIGI+VD RRRNKSVESLQ N QRLKEY+SKLILFP    KP+ GDA  +++K A+QL G ++P++   K  +A  ITD+ +KF AF  +RQARA  RL+GIRAK+ K+A E  + SKP
Sbjct:    1 MPLKRNNIICNGHFHKDWQRYVKTWFNQPARKQRRHTSRVKKARTVAPRPIGSLRPAVRCPTFRYNTRMRAGRGFSLEELKAAGISKRVAPTIGIAVDFRRRNKSVESLQGNVQRLKEYRSKLILFPKKMSKPKKGDAEEQELKMATQLKGVVLPVKNVVKPEKARVITDEDRKFSAFTALRQARAHRRLFGIRAKRTKEAKEEAEQSKP 210
The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l13 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000103559.026e-11373.93supercontig:LSalAtl2s:LSalAtl2s686:210130:211756:1... [more]
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BLAST of 60s ribosomal protein l13 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|21759388|sp|Q90Z10.3|RL13_DANRE1.918e-8060.77RecName: Full=60S ribosomal protein L13[more]
gi|730528|sp|P41126.1|RL13_DROME1.831e-7859.72RecName: Full=60S ribosomal protein L13; AltName: ... [more]
gi|21759387|sp|Q90YV5.3|RL13_ICTPU4.531e-7859.81RecName: Full=60S ribosomal protein L13[more]
gi|21903462|sp|P26373.4|RL13_HUMAN4.544e-7760.29RecName: Full=60S ribosomal protein L13; AltName: ... [more]
gi|75060396|sp|Q56JZ1.3|RL13_BOVIN5.014e-7760.29RecName: Full=60S ribosomal protein L13[more]
gi|730529|sp|P41123.2|RL13_RAT8.288e-7759.33RecName: Full=60S ribosomal protein L13[more]
gi|730527|sp|P41125.2|RL13_CHICK9.980e-7760.29RecName: Full=60S ribosomal protein L13; AltName: ... [more]
gi|21759389|sp|Q962U1.1|RL13_SPOFR1.800e-7657.89RecName: Full=60S ribosomal protein L13[more]
gi|21903465|sp|P47963.3|RL13_MOUSE2.392e-7659.33RecName: Full=60S ribosomal protein L13; AltName: ... [more]
gi|6831614|sp|Q9Z313.3|RL13_CRIGR2.080e-7559.33RecName: Full=60S ribosomal protein L13[more]

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BLAST of 60s ribosomal protein l13 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|961375752|gb|ALS04620.1|3.162e-11375.0060S ribosomal protein L13 [Pseudodiaptomus poplesi... [more]
gi|961376218|gb|ALS04853.1|7.194e-11375.0060S ribosomal protein L13 [Pseudodiaptomus poplesi... [more]
gi|961376250|gb|ALS04869.1|4.486e-11274.5260S ribosomal protein L13 [Pseudodiaptomus poplesi... [more]
gi|290561304|gb|ADD38054.1|8.641e-10973.9360S ribosomal protein L13 [Lepeophtheirus salmonis... [more]
gi|225713374|gb|ACO12533.1|2.145e-10873.9360S ribosomal protein L13 [Lepeophtheirus salmonis... [more]
gi|1325310469|ref|XP_023336843.1|2.874e-10773.0860S ribosomal protein L13-like [Eurytemora affinis... [more]
gi|961374522|gb|ALS04005.1|1.365e-10470.5360S ribosomal protein L13, partial [Acartia pacifi... [more]
gi|926631936|ref|XP_013781715.1|9.003e-9166.0560S ribosomal protein L13-like [Limulus polyphemus... [more]
gi|671758370|gb|AII97595.1|3.041e-8863.72BLTX199 [Nephila pilipes][more]
gi|957840793|ref|XP_014670713.1|4.754e-8862.86PREDICTED: 60S ribosomal protein L13-like [Priapul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1087_size63509supercontigscaffold1087_size63509:60317..60955 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1087_size63509-processed-gene-0.8-mRNA-1snap_masked-scaffold1087_size63509-processed-gene-0.8-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1087_size63509:60317..60955+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1087_size63509-processed-gene-0.8 ID=snap_masked-scaffold1087_size63509-processed-gene-0.8|Name=60s ribosomal protein l13|organism=Tigriopus kingsejongensis|type=gene|length=639bp|location=Sequence derived from alignment at scaffold1087_size63509:60317..60955+ (Tigriopus kingsejongensis)
ATGCCTTCCAAACGCAACCAGATGGTGCCCAATGCGCATTTCCATAAGGA
TTGGCAGCGCTACGTCAAGACCTGGTTCAACCAGCCGGCCCGTGCCGCCC
GTCGCCGCCGTGCCCGTGTGGTCAAGGCCGCCAGTGTGGCCCCGCGACCC
GTCAAGACGCTCCGACCCGTGGTCCGTTGTCCCACGTTCAAGTATAACAT
CAAGCAGCGCTTGGGGCGTGGCTTCACGCTGGAGGAGCTCAAGGCCGCTG
GTCTGTCCAAGGGCCAGGCCCAGACCATCGGCATCTCGGTGGATCACCGT
CGCCGCAACAAGTCGGTGGAGTCGCTCCAAGCCAACACTCAGCGCCTCAA
GGAGTACAAGAGCAAGCTGATCTTGTTCCCCATCAACAGCCAGAAGCCTC
GCGCCGGTGACGCCTCGGCCGAAGACATCAAGAAGGCCAGCCAGTTGGGC
GGTCGAATCATGCCGCTGCAGATCACGACCAAGCGCCCGCGCGCCATGCC
CATCACGGACGACATGAAGAAGTTCAAGGCCTTCAACACGATCCGCCAGG
CCCGCGCCGTGGCCCGACTCTGGGGTATCCGAGCCAAGAAGGCCAAGGAT
GCCGAAGCCGACGACCTCTCCAAGCCTGGCAAGAAGTAA
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Synonyms
The feature '60s ribosomal protein l13' has the following synonyms
Synonym
Tk11011
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