histone 1o, maker-scaffold9_size846264-snap-gene-2.18 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of histone 1o vs. L. salmonis genes
Match: EMLSAG00000000191 (supercontig:LSalAtl2s:LSalAtl2s1029:169839:170456:1 gene:EMLSAG00000000191 transcript:EMLSAT00000000191 description:"augustus_masked-LSalAtl2s1029-processed-gene-1.5") HSP 1 Score: 90.5077 bits (223), Expect = 9.036e-21 Identity = 40/83 (48.19%), Postives = 61/83 (73.49%), Query Frame = 0 Query: 220 KVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSEK 302 KV +HP Y MV+ A+H +K++KGSS+ A+LKYIM+NY+VG + K +N H+K AL + + G +K V +G GAAG F++++K Sbjct: 32 KVAASHPKYVDMVVAAIHGLKEQKGSSKHAILKYIMANYKVGDNDKHINAHVKIALKSGSXDGXLKQV-RGNGAAGXFRVTDK 113 HSP 2 Score: 90.5077 bits (223), Expect = 9.036e-21 Identity = 40/83 (48.19%), Postives = 61/83 (73.49%), Query Frame = 0 Query: 690 KVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSEK 772 KV +HP Y MV+ A+H +K++KGSS+ A+LKYIM+NY+VG + K +N H+K AL + + G +K V +G GAAG F++++K Sbjct: 32 KVAASHPKYVDMVVAAIHGLKEQKGSSKHAILKYIMANYKVGDNDKHINAHVKIALKSGSXDGXLKQV-RGNGAAGXFRVTDK 113
BLAST of histone 1o vs. SwissProt
Match: gi|54035964|sp|O17536.3|H14_CAEEL (RecName: Full=Histone H1.4; AltName: Full=Histone H1-like protein 4) HSP 1 Score: 82.4185 bits (202), Expect = 5.163e-16 Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 0 Query: 213 KSAKV-VAKVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNV---GQGKGAAGSFKLSEK 302 K+ KV + K AHPP+ MV EA+ SIKDRKG SR A+LKYI + Y +G +N HL+KAL KG N G GA G F+L+EK Sbjct: 39 KTTKVPMVKADAAHPPFINMVTEAISSIKDRKGPSRAAILKYITTKYTLGDQANKINAHLRKAL----NKGLESNAFVQASGNGANGRFRLAEK 128 HSP 2 Score: 82.4185 bits (202), Expect = 5.163e-16 Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 0 Query: 683 KSAKV-VAKVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNV---GQGKGAAGSFKLSEK 772 K+ KV + K AHPP+ MV EA+ SIKDRKG SR A+LKYI + Y +G +N HL+KAL KG N G GA G F+L+EK Sbjct: 39 KTTKVPMVKADAAHPPFINMVTEAISSIKDRKGPSRAAILKYITTKYTLGDQANKINAHLRKAL----NKGLESNAFVQASGNGANGRFRLAEK 128
BLAST of histone 1o vs. SwissProt
Match: gi|54041077|sp|P15796.3|H12_CAEEL (RecName: Full=Histone H1.2; AltName: Full=Histone H1-like protein 2) HSP 1 Score: 79.337 bits (194), Expect = 1.717e-15 Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 0 Query: 219 AKVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALV-AAAKKGSIKNVGQGKGAAGSFKLSEKA 303 AKV AHPP+ MV A+ S+K+RKGSS+ A+LKYI +NY+VG +N+ L+ AL A K +++VG GA+G F+++EKA Sbjct: 32 AKVAAAHPPFINMVTAAISSLKERKGSSKIAILKYITANYKVGDQLTKINSRLRAALNKGVASKALVQSVGN--GASGRFRVAEKA 115 HSP 2 Score: 79.337 bits (194), Expect = 1.717e-15 Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 0 Query: 689 AKVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALV-AAAKKGSIKNVGQGKGAAGSFKLSEKA 773 AKV AHPP+ MV A+ S+K+RKGSS+ A+LKYI +NY+VG +N+ L+ AL A K +++VG GA+G F+++EKA Sbjct: 32 AKVAAAHPPFINMVTAAISSLKERKGSSKIAILKYITANYKVGDQLTKINSRLRAALNKGVASKALVQSVGN--GASGRFRVAEKA 115
BLAST of histone 1o vs. SwissProt
Match: gi|54035963|sp|O16277.3|H16_CAEEL (RecName: Full=Putative histone H1.6; AltName: Full=Histone H1-like protein 6) HSP 1 Score: 76.2554 bits (186), Expect = 1.948e-14 Identity = 49/113 (43.36%), Postives = 71/113 (62.83%), Query Frame = 0 Query: 194 VSDKVVIKKASTKVSAKAPKS-AKVVAKV--TPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKAL-VAAAKKGSIKNVGQGKGAAGSFKLSEK 302 +SD V + + K KAPK+ A V KV AHPP+ MV A+ S+K+RKGSS+ A+LKYI +NY++G K +N++L+ AL A K ++ VG GA G F+++EK Sbjct: 1 MSDVAVAETPAVKTPTKAPKANATKVPKVKTAAAHPPFINMVTAAISSLKERKGSSKIAILKYITANYKLGDQVKKINSNLRSALKKGVASKALVQTVGT--GATGRFRVAEK 111 HSP 2 Score: 76.2554 bits (186), Expect = 1.948e-14 Identity = 49/113 (43.36%), Postives = 71/113 (62.83%), Query Frame = 0 Query: 664 VSDKVVIKKASTKVSAKAPKS-AKVVAKV--TPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKAL-VAAAKKGSIKNVGQGKGAAGSFKLSEK 772 +SD V + + K KAPK+ A V KV AHPP+ MV A+ S+K+RKGSS+ A+LKYI +NY++G K +N++L+ AL A K ++ VG GA G F+++EK Sbjct: 1 MSDVAVAETPAVKTPTKAPKANATKVPKVKTAAAHPPFINMVTAAISSLKERKGSSKIAILKYITANYKLGDQVKKINSNLRSALKKGVASKALVQTVGT--GATGRFRVAEK 111
BLAST of histone 1o vs. SwissProt
Match: gi|54035962|sp|O01833.3|H15_CAEEL (RecName: Full=Histone H1.5; AltName: Full=Histone H1-like protein 5) HSP 1 Score: 75.0998 bits (183), Expect = 9.654e-14 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 0 Query: 220 KVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNV---GQGKGAAGSFKLS 300 KV AHPP+ M+ EA+ ++KDRKGSSR A+ K+I + Y +G N HL+ AL KKG + V G GA G F+L+ Sbjct: 33 KVVAAHPPFINMITEAVSNLKDRKGSSRVAIFKFITAKYTLGDQVNKTNAHLRSAL----KKGVVSKVLVQTNGIGANGRFRLA 112 HSP 2 Score: 75.0998 bits (183), Expect = 9.654e-14 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 0 Query: 690 KVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNV---GQGKGAAGSFKLS 770 KV AHPP+ M+ EA+ ++KDRKGSSR A+ K+I + Y +G N HL+ AL KKG + V G GA G F+L+ Sbjct: 33 KVVAAHPPFINMITEAVSNLKDRKGSSRVAIFKFITAKYTLGDQVNKTNAHLRSAL----KKGVVSKVLVQTNGIGANGRFRLA 112
BLAST of histone 1o vs. SwissProt
Match: gi|121928|sp|P15870.1|H1D_STRPU (RecName: Full=Histone H1-delta) HSP 1 Score: 70.4774 bits (171), Expect = 1.382e-12 Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 0 Query: 224 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 301 +HP Y M+ AL S+K++KGSSRQA+LKY+ +N+ VG + N H+K+AL G +++V +G GA+GSF L+E Sbjct: 32 SHPKYSDMIASALESLKEKKGSSRQAILKYVKANFTVGDN---ANVHIKQALKRGVTSGQLRHV-KGSGASGSFLLAE 105 HSP 2 Score: 70.4774 bits (171), Expect = 1.382e-12 Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 0 Query: 694 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 771 +HP Y M+ AL S+K++KGSSRQA+LKY+ +N+ VG + N H+K+AL G +++V +G GA+GSF L+E Sbjct: 32 SHPKYSDMIASALESLKEKKGSSRQAILKYVKANFTVGDN---ANVHIKQALKRGVTSGQLRHV-KGSGASGSFLLAE 105
BLAST of histone 1o vs. SwissProt
Match: gi|121921|sp|P15869.1|H1B_STRPU (RecName: Full=Histone H1-beta, late embryonic) HSP 1 Score: 70.4774 bits (171), Expect = 2.607e-12 Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 0 Query: 223 PAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSEK 302 PAHP MVL A+ ++K+R GSS QA+ KYI NY V D K +K+AL+ +KG++ V +GKGA+GSFKL +K Sbjct: 16 PAHPSSSEMVLAAITALKERGGSSAQAIRKYIEKNYTV--DIKKQAIFIKRALITGVEKGTLVQV-KGKGASGSFKLGKK 92 HSP 2 Score: 70.4774 bits (171), Expect = 2.607e-12 Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 0 Query: 693 PAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSEK 772 PAHP MVL A+ ++K+R GSS QA+ KYI NY V D K +K+AL+ +KG++ V +GKGA+GSFKL +K Sbjct: 16 PAHPSSSEMVLAAITALKERGGSSAQAIRKYIEKNYTV--DIKKQAIFIKRALITGVEKGTLVQV-KGKGASGSFKLGKK 92
BLAST of histone 1o vs. SwissProt
Match: gi|121929|sp|P19375.1|H1E_STRPU (RecName: Full=Histone H1, early embryonic) HSP 1 Score: 70.0922 bits (170), Expect = 2.860e-12 Identity = 41/96 (42.71%), Postives = 62/96 (64.58%), Query Frame = 0 Query: 214 SAKVVAKVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSEKAMQMQAN 309 S KV K AHPP MV A+ +KDR GSS QA+ KYI +N++V D++ + +K+AL + +KG + +GKGA+GSFK++ +A + QA+ Sbjct: 7 SKKVTTKKPAAHPPAAEMVATAITELKDRNGSSLQAIKKYIATNFDVQMDRQLL--FIKRALKSGVEKGKLVQT-KGKGASGSFKVNVQAAKAQAS 99 HSP 2 Score: 70.0922 bits (170), Expect = 2.860e-12 Identity = 41/96 (42.71%), Postives = 62/96 (64.58%), Query Frame = 0 Query: 684 SAKVVAKVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSEKAMQMQAN 779 S KV K AHPP MV A+ +KDR GSS QA+ KYI +N++V D++ + +K+AL + +KG + +GKGA+GSFK++ +A + QA+ Sbjct: 7 SKKVTTKKPAAHPPAAEMVATAITELKDRNGSSLQAIKKYIATNFDVQMDRQLL--FIKRALKSGVEKGKLVQT-KGKGASGSFKVNVQAAKAQAS 99
BLAST of histone 1o vs. SwissProt
Match: gi|54035966|sp|Q19743.3|H13_CAEEL (RecName: Full=Histone H1.3; AltName: Full=Histone H1-like protein 3) HSP 1 Score: 69.707 bits (169), Expect = 4.827e-12 Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0 Query: 208 SAKAPKSAKVV----AKVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALV-AAAKKGSIKNVGQGKGAAGSFKLSE 301 + K+PK+AK AK AHPPY MV A++ +K+RKGSS+ A+LKYI NY VG +N L+ L K +++VG GA+G F+++E Sbjct: 17 TVKSPKAAKTTKVPKAKKPVAHPPYINMVTAAINGLKERKGSSKIAILKYITKNYNVGDQIIKINARLRDTLNKGVVSKALVQSVGT--GASGRFRVTE 113 HSP 2 Score: 69.707 bits (169), Expect = 4.827e-12 Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0 Query: 678 SAKAPKSAKVV----AKVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALV-AAAKKGSIKNVGQGKGAAGSFKLSE 771 + K+PK+AK AK AHPPY MV A++ +K+RKGSS+ A+LKYI NY VG +N L+ L K +++VG GA+G F+++E Sbjct: 17 TVKSPKAAKTTKVPKAKKPVAHPPYINMVTAAINGLKERKGSSKIAILKYITKNYNVGDQIIKINARLRDTLNKGVVSKALVQSVGT--GASGRFRVTE 113
BLAST of histone 1o vs. SwissProt
Match: gi|54041076|sp|P10771.4|H11_CAEEL (RecName: Full=Histone H1.1) HSP 1 Score: 67.3958 bits (163), Expect = 3.067e-11 Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 0 Query: 224 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKG-SIKNVGQ--GKGAAGSFKLSE 301 AHPPY M+ EA+ +KDRKG+S+QA+LK+I NY++G + +N HL++AL K+G + K + Q G GA G F++ E Sbjct: 37 AHPPYINMIKEAIKQLKDRKGASKQAILKFISQNYKLGDNVIQINAHLRQAL----KRGVTSKALVQAAGSGANGRFRVPE 113 HSP 2 Score: 67.3958 bits (163), Expect = 3.067e-11 Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 0 Query: 694 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKG-SIKNVGQ--GKGAAGSFKLSE 771 AHPPY M+ EA+ +KDRKG+S+QA+LK+I NY++G + +N HL++AL K+G + K + Q G GA G F++ E Sbjct: 37 AHPPYINMIKEAIKQLKDRKGASKQAILKFISQNYKLGDNVIQINAHLRQAL----KRGVTSKALVQAAGSGANGRFRVPE 113
BLAST of histone 1o vs. SwissProt
Match: gi|54035965|sp|Q18336.1|H1X_CAEEL (RecName: Full=Histone H1.X; AltName: Full=Histone H1-like protein 1) HSP 1 Score: 67.781 bits (164), Expect = 3.264e-11 Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 0 Query: 225 HPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKL---SEKAMQM 306 HP Y M+ A+ +I + GSS+ A+LKYI NY VG++ VNNHL+ L A G I+ +G GA GSF++ EK +Q+ Sbjct: 37 HPSYMDMIKGAIQAIDNGTGSSKAAILKYIAQNYHVGENLPKVNNHLRSVLKKAVDSGDIEQT-RGHGATGSFRMGKECEKNLQV 120 HSP 2 Score: 67.781 bits (164), Expect = 3.264e-11 Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 0 Query: 695 HPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKL---SEKAMQM 776 HP Y M+ A+ +I + GSS+ A+LKYI NY VG++ VNNHL+ L A G I+ +G GA GSF++ EK +Q+ Sbjct: 37 HPSYMDMIKGAIQAIDNGTGSSKAAILKYIAQNYHVGENLPKVNNHLRSVLKKAVDSGDIEQT-RGHGATGSFRMGKECEKNLQV 120
BLAST of histone 1o vs. nr
Match: gi|387157924|ref|NP_001248345.1| (histone 1o [Aplysia californica] >gi|158997653|gb|ABW86950.1| histone 1o [Aplysia californica]) HSP 1 Score: 96.6709 bits (239), Expect = 4.703e-19 Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 0 Query: 225 HPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSEK 302 HP Y M+ A+ S+K+R GSSRQA+LKYIM+NY VGKD+K +N+H+K AL A AK G++K +G GA+GSFKL K Sbjct: 31 HPKYSEMIKAAISSLKERGGSSRQAILKYIMANYNVGKDEKVINSHMKMALRAGAKNGNLKQ-SKGTGASGSFKLGSK 107 HSP 2 Score: 96.6709 bits (239), Expect = 4.703e-19 Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 0 Query: 695 HPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSEK 772 HP Y M+ A+ S+K+R GSSRQA+LKYIM+NY VGKD+K +N+H+K AL A AK G++K +G GA+GSFKL K Sbjct: 31 HPKYSEMIKAAISSLKERGGSSRQAILKYIMANYNVGKDEKVINSHMKMALRAGAKNGNLKQ-SKGTGASGSFKLGSK 107
BLAST of histone 1o vs. nr
Match: gi|676486625|ref|XP_009064035.1| (hypothetical protein LOTGIDRAFT_207166 [Lottia gigantea] >gi|556096685|gb|ESO85337.1| hypothetical protein LOTGIDRAFT_207166 [Lottia gigantea]) HSP 1 Score: 92.8189 bits (229), Expect = 5.687e-18 Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 0 Query: 224 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 301 +HP Y M+ A+ ++K+R GSSRQA+LKYI++NY VGKD K VNNHLK AL A K G +K +G GA+GSF+L E Sbjct: 30 SHPKYSDMIRAAVTALKERGGSSRQAILKYILANYNVGKDSKTVNNHLKLALRAGVKNGKLKQ-SKGTGASGSFRLGE 106 HSP 2 Score: 92.8189 bits (229), Expect = 5.687e-18 Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 0 Query: 694 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 771 +HP Y M+ A+ ++K+R GSSRQA+LKYI++NY VGKD K VNNHLK AL A K G +K +G GA+GSF+L E Sbjct: 30 SHPKYSDMIRAAVTALKERGGSSRQAILKYILANYNVGKDSKTVNNHLKLALRAGVKNGKLKQ-SKGTGASGSFRLGE 106
BLAST of histone 1o vs. nr
Match: gi|1022765714|gb|KZS10847.1| (putative Histone H1.0 [Daphnia magna]) HSP 1 Score: 96.6709 bits (239), Expect = 1.670e-17 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0 Query: 225 HPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLS 300 HPPY M++ A+ ++K+R GSSRQA+LKYI SNY++G D K N HLK+AL G++KN KGAAGSF++S Sbjct: 122 HPPYLEMIVAAVETLKERNGSSRQAILKYITSNYDLGVDTKMANVHLKQALKRGITVGTLKNTKGAKGAAGSFRIS 197 HSP 2 Score: 96.6709 bits (239), Expect = 1.670e-17 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0 Query: 695 HPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLS 770 HPPY M++ A+ ++K+R GSSRQA+LKYI SNY++G D K N HLK+AL G++KN KGAAGSF++S Sbjct: 122 HPPYLEMIVAAVETLKERNGSSRQAILKYITSNYDLGVDTKMANVHLKQALKRGITVGTLKNTKGAKGAAGSFRIS 197
BLAST of histone 1o vs. nr
Match: gi|321462820|gb|EFX73840.1| (hypothetical protein DAPPUDRAFT_324827 [Daphnia pulex]) HSP 1 Score: 95.5153 bits (236), Expect = 4.405e-17 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 224 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLS 300 +HPPY M++ A+ S+K+R GSSRQA+LKYI SNY +G DQK N HLK+AL G++ N KGAAGSF++S Sbjct: 135 SHPPYLEMIVAAVESLKERSGSSRQAILKYITSNYNLGVDQKMANVHLKQALKRGITVGTLMNTKGAKGAAGSFRIS 211 HSP 2 Score: 95.5153 bits (236), Expect = 4.405e-17 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 694 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLS 770 +HPPY M++ A+ S+K+R GSSRQA+LKYI SNY +G DQK N HLK+AL G++ N KGAAGSF++S Sbjct: 135 SHPPYLEMIVAAVESLKERSGSSRQAILKYITSNYNLGVDQKMANVHLKQALKRGITVGTLMNTKGAKGAAGSFRIS 211
BLAST of histone 1o vs. nr
Match: gi|762157017|ref|XP_011416653.1| (PREDICTED: histone H1-delta [Crassostrea gigas] >gi|762157023|ref|XP_011416656.1| PREDICTED: histone H1-delta [Crassostrea gigas] >gi|762157029|ref|XP_011416660.1| PREDICTED: histone H1-delta-like [Crassostrea gigas] >gi|405962334|gb|EKC28024.1| Histone H1-delta [Crassostrea gigas] >gi|405962339|gb|EKC28029.1| Histone H1-delta [Crassostrea gigas] >gi|405962344|gb|EKC28034.1| Histone H1-delta [Crassostrea gigas]) HSP 1 Score: 90.8929 bits (224), Expect = 5.990e-17 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 224 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 301 AHP Y M+ AL S+K+R GSSRQA+LKYIM+N++VG D P+N HLK AL KKG++K +G GA GSFKL + Sbjct: 22 AHPKYVDMIRAALESLKERGGSSRQAILKYIMANFKVGNDVNPINVHLKMALKNGVKKGALKQA-KGTGATGSFKLGD 98 HSP 2 Score: 90.8929 bits (224), Expect = 5.990e-17 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 694 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 771 AHP Y M+ AL S+K+R GSSRQA+LKYIM+N++VG D P+N HLK AL KKG++K +G GA GSFKL + Sbjct: 22 AHPKYVDMIRAALESLKERGGSSRQAILKYIMANFKVGNDVNPINVHLKMALKNGVKKGALKQA-KGTGATGSFKLGD 98
BLAST of histone 1o vs. nr
Match: gi|405962349|gb|EKC28039.1| (Histone H1-delta [Crassostrea gigas]) HSP 1 Score: 90.8929 bits (224), Expect = 6.137e-17 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 224 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 301 AHP Y M+ AL S+K+R GSSRQA+LKYIM+N++VG D P+N HLK AL KKG++K +G GA GSFKL + Sbjct: 22 AHPKYVDMIRAALESLKERGGSSRQAILKYIMANFKVGNDVNPINVHLKMALKNGVKKGALKQA-KGTGATGSFKLGD 98 HSP 2 Score: 90.8929 bits (224), Expect = 6.137e-17 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 694 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 771 AHP Y M+ AL S+K+R GSSRQA+LKYIM+N++VG D P+N HLK AL KKG++K +G GA GSFKL + Sbjct: 22 AHPKYVDMIRAALESLKERGGSSRQAILKYIMANFKVGNDVNPINVHLKMALKNGVKKGALKQA-KGTGATGSFKLGD 98
BLAST of histone 1o vs. nr
Match: gi|321462931|gb|EFX73951.1| (hypothetical protein DAPPUDRAFT_252500 [Daphnia pulex]) HSP 1 Score: 95.5153 bits (236), Expect = 6.620e-17 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 224 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLS 300 +HPPY M++ A+ S+K+R GSSRQA+LKYI SNY +G DQK N HLK+AL G++ N KGAAGSF++S Sbjct: 135 SHPPYLEMIVAAVESLKERSGSSRQAILKYITSNYNLGVDQKMANVHLKQALKRGITVGTLMNTKGAKGAAGSFRIS 211 HSP 2 Score: 95.5153 bits (236), Expect = 6.620e-17 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 694 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLS 770 +HPPY M++ A+ S+K+R GSSRQA+LKYI SNY +G DQK N HLK+AL G++ N KGAAGSF++S Sbjct: 135 SHPPYLEMIVAAVESLKERSGSSRQAILKYITSNYNLGVDQKMANVHLKQALKRGITVGTLMNTKGAKGAAGSFRIS 211
BLAST of histone 1o vs. nr
Match: gi|762156990|ref|XP_011416639.1| (PREDICTED: histone H1-delta-like [Crassostrea gigas] >gi|762156992|ref|XP_011416640.1| PREDICTED: histone H1-delta-like [Crassostrea gigas] >gi|405962323|gb|EKC28013.1| Putative histone H1.6 [Crassostrea gigas]) HSP 1 Score: 90.5077 bits (223), Expect = 6.877e-17 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 224 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 301 AHP Y M+ AL S+K+R GSSRQA+LKYIM+NY+VG D +N HLK AL KKG++K +G GA+GSFKL + Sbjct: 22 AHPKYVDMIRAALESLKERGGSSRQAILKYIMANYKVGNDVNSINAHLKMALKNGVKKGALKQA-KGTGASGSFKLGD 98 HSP 2 Score: 90.5077 bits (223), Expect = 6.877e-17 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 694 AHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 771 AHP Y M+ AL S+K+R GSSRQA+LKYIM+NY+VG D +N HLK AL KKG++K +G GA+GSFKL + Sbjct: 22 AHPKYVDMIRAALESLKERGGSSRQAILKYIMANYKVGNDVNSINAHLKMALKNGVKKGALKQA-KGTGASGSFKLGD 98
BLAST of histone 1o vs. nr
Match: gi|954589781|gb|KRZ67353.1| (Histone H1.4 [Trichinella papuae]) HSP 1 Score: 90.8929 bits (224), Expect = 9.628e-17 Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 0 Query: 209 AKAPKSAKVVAKVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 301 ++APK +K + HP Y M++ AL ++KD GSSRQ LLKYIM+NY VG D K VN H+K AL K G+IK + +G GA+G F++ E Sbjct: 24 SRAPKKSKTASN----HPAYTEMIVTALKTLKDHHGSSRQGLLKYIMANYNVGTDAKMVNAHMKMALKRGLKSGTIK-LAKGTGASGRFRVGE 111 HSP 2 Score: 90.8929 bits (224), Expect = 9.628e-17 Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 0 Query: 679 AKAPKSAKVVAKVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 771 ++APK +K + HP Y M++ AL ++KD GSSRQ LLKYIM+NY VG D K VN H+K AL K G+IK + +G GA+G F++ E Sbjct: 24 SRAPKKSKTASN----HPAYTEMIVTALKTLKDHHGSSRQGLLKYIMANYNVGTDAKMVNAHMKMALKRGLKSGTIK-LAKGTGASGRFRVGE 111
BLAST of histone 1o vs. nr
Match: gi|954473190|gb|KRZ03522.1| (Histone H1.4 [Trichinella zimbabwensis]) HSP 1 Score: 90.8929 bits (224), Expect = 1.086e-16 Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 0 Query: 209 AKAPKSAKVVAKVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 301 ++APK +K + HP Y M++ AL ++KD GSSRQ LLKYIM+NY VG D K VN H+K AL K G+IK + +G GA+G F++ E Sbjct: 24 SRAPKKSKTASN----HPAYTEMIVTALKTLKDHHGSSRQGLLKYIMANYNVGTDAKMVNAHMKMALKRGLKSGTIK-LAKGTGASGRFRVGE 111 HSP 2 Score: 90.8929 bits (224), Expect = 1.086e-16 Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 0 Query: 679 AKAPKSAKVVAKVTPAHPPYGRMVLEALHSIKDRKGSSRQALLKYIMSNYEVGKDQKPVNNHLKKALVAAAKKGSIKNVGQGKGAAGSFKLSE 771 ++APK +K + HP Y M++ AL ++KD GSSRQ LLKYIM+NY VG D K VN H+K AL K G+IK + +G GA+G F++ E Sbjct: 24 SRAPKKSKTASN----HPAYTEMIVTALKTLKDHHGSSRQGLLKYIMANYNVGTDAKMVNAHMKMALKRGLKSGTIK-LAKGTGASGRFRVGE 111 The following BLAST results are available for this feature:
BLAST of histone 1o vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of histone 1o vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of histone 1o vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold9_size846264:239388..263625- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold9_size846264-snap-gene-2.18 ID=maker-scaffold9_size846264-snap-gene-2.18|Name=histone 1o|organism=Tigriopus kingsejongensis|type=gene|length=24238bp|location=Sequence derived from alignment at scaffold9_size846264:239388..263625- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'histone 1o' has the following synonyms
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