putative tetraspanin, maker-scaffold84_size396325-snap-gene-0.16 (gene) Tigriopus kingsejongensis

Overview
Nameputative tetraspanin
Unique Namemaker-scaffold84_size396325-snap-gene-0.16
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of putative tetraspanin vs. L. salmonis genes
Match: EMLSAG00000003506 (supercontig:LSalAtl2s:LSalAtl2s191:170365:186205:-1 gene:EMLSAG00000003506 transcript:EMLSAT00000003506 description:"maker-LSalAtl2s191-snap-gene-2.7")

HSP 1 Score: 73.559 bits (179), Expect = 3.214e-15
Identity = 46/152 (30.26%), Postives = 77/152 (50.66%), Query Frame = 0
Query:  133 MLWIVLG-FCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSCCRP-----GEESDCVYQPEGS-TAYLDGCIERM 277
            +L IV+G   F  TF GCCGA  +N CM  +F ++L V     +GA    Y+       ++   ++K +  Y+      + +T W++VQ  LECCGA+ ++DW   T       VP SCC       GE    + + + S   +++GC++++
Sbjct:   53 ILLIVVGCITFCVTFFGCCGAIKENHCMTLTFSVLLAVIFVIELGAGIAAYLLKSEVRQIIEVNMEKGLTNYESRGHEGVTKT-WNIVQHELECCGAQEYKDWINTTFSVKTYSVPDSCCFSDVQGCGEGILRISEDQASKIIHVNGCLDKL 203          
BLAST of putative tetraspanin vs. L. salmonis genes
Match: EMLSAG00000008247 (supercontig:LSalAtl2s:LSalAtl2s498:206287:219492:1 gene:EMLSAG00000008247 transcript:EMLSAT00000008247 description:"maker-LSalAtl2s498-augustus-gene-2.18")

HSP 1 Score: 67.3958 bits (163), Expect = 2.789e-12
Identity = 60/246 (24.39%), Postives = 106/246 (43.09%), Query Frame = 0
Query:   72 CCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLGFCFIFTFLGCCGAACQN-RCMLGSFIIILFVFLGAN-VGAIAYMYVEFPSELAMMSAELKKTIPYYDVV-----DLNSIVRTFWDLVQPGLECCGAESFRDWTQA-----TGLRPGRKVPGSCCRPGEESDCVYQPEGSTAYLDGCIER---MATPLQAAFWAVPTALALVLLLALCV 302
            C  D  +F   + NF  +L   AL     +  +     L             + LY +    L I+  F  + + +GCCG + ++ R ML   I +  + L    +GA+AY Y ++      +++EL+  +  +D       + +SI +   D +Q G++CCG +SF DW +      T +R    VP SCC     + C  +   S     GCI+R   +A+       AV   + ++ +  +C+
Sbjct:  594 CSQDCLRFSTHLFNFLLFLTGIALSGVGLWTIIVKDPSLVLLT---------SGLYDVIAYALIIMGLFVLVLSIMGCCGISKRSPRLMLIYSICLXIMXLAEXAIGALAYCYRDY------INSELR--VNLFDKYQREYGNEDSITKAI-DQLQVGMKCCGVDSFEDWKKTEWWNQTDIRQKNLVPDSCCLTP-SAFCGVRDHPSNIRYTGCIDRIGKIASDHMIIIGAVSLGVCIIQIFGVCL 820          
BLAST of putative tetraspanin vs. L. salmonis genes
Match: EMLSAG00000007142 (supercontig:LSalAtl2s:LSalAtl2s402:410135:415370:1 gene:EMLSAG00000007142 transcript:EMLSAT00000007142 description:"maker-LSalAtl2s402-augustus-gene-4.9")

HSP 1 Score: 57.7658 bits (138), Expect = 1.358e-9
Identity = 58/222 (26.13%), Postives = 98/222 (44.14%), Query Frame = 0
Query:  134 LWIVLG-FCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESF----RDWTQATGLRPGRKVPGSCCRPGEESDC---VYQPEGS----TAYLDGC-------IERMATPLQAAFWAVPTALALVLLLALCV-CTRGDRSNRRERSAAGPRRRNKRADSQLSQYSE 335
            L IVLG + F     G   +  +NR  LG + I+L +   A +G+I +  +E  + L     E        D  +++  V   WD +Q GL CCG ++F     D+ + T +     VP SCC   E+ +C   V+    +    + Y++GC       ++   TP+   +  V   LA+  ++ + + C    + NRR R     R  N   D Q++  S+
Sbjct:   67 LMIVLGVYTFCVCIYGFLISGSENRIFLGIYAILLSIAFLAQLGSI-FTSLELRNHLVQGRLEQSSINEDLDKYNIDYSVTKKWDALQSGLHCCGGQNFLTGYNDY-RNTAIGGNNSVPDSCCHEMEK-NCGKGVFSRTETEVRNSIYVNGCLTVLKDKLDNEVTPMMIVYAVVGVVLAITEIITIVLACAYVAQLNRRRRRDMDFRYGNAGHDPQIAGISD 285          
BLAST of putative tetraspanin vs. L. salmonis genes
Match: EMLSAG00000009268 (supercontig:LSalAtl2s:LSalAtl2s58:698204:699085:1 gene:EMLSAG00000009268 transcript:EMLSAT00000009268 description:"augustus_masked-LSalAtl2s58-processed-gene-7.0")

HSP 1 Score: 52.7582 bits (125), Expect = 5.645e-8
Identity = 49/195 (25.13%), Postives = 85/195 (43.59%), Query Frame = 0
Query:   72 CCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLGFCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANV--GAIAYMYVEFPSELAMMSAELKKTIPYY-DVVDLNSIVRTFWDLVQPG-LECCGAESFRDWTQ---------ATGLRPGRKVPGSCCRP 253
            CCL   K+L+F  N   WL+   +LA   + +          +  +++ +         F+ +W      F+  F GC GA  +N  +L  + I L + L   +  G + +++ ++  E A  S+  +  I +Y D  D  +++    D +Q   L+CCG E   DW +         + G R    VP SCC+P
Sbjct:   38 CCL---KYLIFGFNVIFWLLGLCILAIGIWAWTEKDTFNNLSVLTNIALDPA-------FIFIW-AGALTFVIGFTGCVGALRENTSLLAXYAIFLALLLLXEMTAGILGFVFKDWIKEQA--SSGFQTVIVHYRDDPDQQNLI----DWIQDDWLQCCGIEGPHDWDKNIYFNCSSASVGSREACGVPFSCCKP 215          
BLAST of putative tetraspanin vs. L. salmonis genes
Match: EMLSAG00000011144 (supercontig:LSalAtl2s:LSalAtl2s757:42372:43082:-1 gene:EMLSAG00000011144 transcript:EMLSAT00000011144 description:"augustus_masked-LSalAtl2s757-processed-gene-0.3")

HSP 1 Score: 50.447 bits (119), Expect = 1.934e-7
Identity = 38/172 (22.09%), Postives = 80/172 (46.51%), Query Frame = 0
Query:  145 TFLGCCGAACQNRCMLGSFIIILFVFLGANVG-AIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSCCRPGEE---SDCVYQPEGSTAYLDGCIE---RMATPLQAAFWAVPTALALVLLLALCV-CTRGDR 308
            +F GCCG   +N C++ +   +LF+ +   +G  ++Y++ +  +   ++   +   +  Y+  D   + +  W+ +Q    CCG   +++W  ++  R    +P SCC+   +    D     + S    +GCI+   R+ +  Q++   V   L L  LL + + C  G+ 
Sbjct:   65 SFFGCCGMCMENACLMRTLGFLLFLLILTEIGVVVSYLFYK-DTFQDVIVENMIGDMDKYNKPDFEQVTKE-WNHLQIDFACCGTNDYKEWFNSSYAR----IPDSCCKTVSDQCAKDITIDSDPSAINTEGCIKEXNRIISDNQSSVIGVGVGLLLFELLGIIIACCYGNN 230          
BLAST of putative tetraspanin vs. SwissProt
Match: gi|82184085|sp|Q6GMK6.1|TSN9_DANRE (RecName: Full=Tetraspanin-9; Short=Tspan-9)

HSP 1 Score: 71.2478 bits (173), Expect = 5.931e-13
Identity = 71/236 (30.08%), Postives = 109/236 (46.19%), Query Frame = 0
Query:   69 MSRCCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGF-PIRPDLSPENETALYFIFFLMLWIVLGFCFIFT-FLGCCGAACQNRCMLGSFIIILFVFLGANVGAIA--YMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSCCRPGEESDCVYQPEGSTAYLDGCIERMATPLQAAFWAVPTALALVLLLAL 300
            M+R CL   K+++F+ N   WL    LL    ++ V+      F P  P LS  N           L I LG   + T FLGC GA  +N+C+L SF I+L + L A +  +   ++Y E  SE A    +LK  +  Y+  D N  +R  W+++Q   +CCG     DW +A      + VP  CC+    ++C  +   +  +  GC E++   L      + T    VL+L L
Sbjct:    1 MARGCLCCVKYMMFLFNLLFWLSGCGLLGVGIWLSVSQGSFATFSPSFPSLSAAN-----------LVITLGSVVMVTGFLGCLGAIKENKCLLLSFFIVLLIILLAELILLILFFVYTEKVSENA--KQDLKDGLRLYN-TDNNVGLRNAWNIIQAEWQCCGVTGLSDWHEAL---QEKSVPDRCCQE-HYTEC-GRNTTNVFWSQGCYEKVEEWLNDNKHLLGTIAMCVLVLQL 217          
BLAST of putative tetraspanin vs. SwissProt
Match: gi|131775|sp|P27701.1|CD82_HUMAN (RecName: Full=CD82 antigen; AltName: Full=C33 antigen; AltName: Full=IA4; AltName: Full=Inducible membrane protein R2; AltName: Full=Metastasis suppressor Kangai-1; AltName: Full=Suppressor of tumorigenicity 6 protein; AltName: Full=Tetraspanin-27; Short=Tspan-27; AltName: CD_antigen=CD82)

HSP 1 Score: 70.4774 bits (171), Expect = 1.727e-12
Identity = 54/188 (28.72%), Postives = 82/188 (43.62%), Query Frame = 0
Query:  142 FIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGL--RPGRKVPGSCCRPGEESDCVY-----------------QPEGSTAYLDGCIERMATPLQ---AAFWAVPTALALV----LLLALCVC 303
             +  FLGC GA  + RC+LG +   L + L A V A A  Y         M   + + I  Y+    +S+ +  WD VQ  ++CCG  SF +WT    L  RP    P SC   GEE + +                   PE    Y +GC+E++   LQ        V   +A++    ++L++C+C
Sbjct:   67 MLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMGGIVTELIRDYNSSREDSL-QDAWDYVQAQVKCCGWVSFYNWTDNAELMNRPEVTYPCSCEVKGEEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVGVGVAIIELLGMVLSICLC 253          
BLAST of putative tetraspanin vs. SwissProt
Match: gi|122140274|sp|Q3SZR9.1|TSN3_BOVIN (RecName: Full=Tetraspanin-3; Short=Tspan-3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.119e-12
Identity = 63/249 (25.30%), Postives = 98/249 (39.36%), Query Frame = 0
Query:   69 MSRCCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLGFCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRK--VPGSCCRPGEESDCVYQPEGSTAYLDGC----IERMATPLQAAFWAVPTALALVLLLALCVCTRGDRSNR 311
            M +C +  +K +L  +N   W   G L     YVF+            D     E     I  +++  V    FI   +GCC    ++RC L +F+IIL +     V  +   YV        +   ++K    Y+  + ++  R   D VQ  L CCG  ++ DW      +  +   VP SCCR    S        S  Y +GC    ++++   +    WA     A+ LL  LC C    R +R
Sbjct:    1 MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFIT---------YDDYDHFFEDVYTLIPAVVIIAVGALLFIIGLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNPDAASRAI-DYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASSCNGSLANPSDLYAEGCEALVVKKLQEIMMHVIWAALAFAAIQLLGMLCACIVLCRRSR 239          
BLAST of putative tetraspanin vs. SwissProt
Match: gi|238055384|sp|B3VSC2.1|TSN9_SHEEP (RecName: Full=Tetraspanin-9; Short=Tspan-9; AltName: Full=Tetraspan NET-5)

HSP 1 Score: 68.9366 bits (167), Expect = 4.231e-12
Identity = 63/211 (29.86%), Postives = 94/211 (44.55%), Query Frame = 0
Query:   69 MSRCCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGF-PIRPDLSPENETALYFIFFLMLWIVLGFCFIFT-FLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSCCRPGEESDCVYQPEGSTAYLDGCIERM 277
            M+R CL   K+ +F+ N   WL    LL    ++ V+      F P  P LS  N           L I +G   + T FLGC GA  +NRC+L SF I+L + L A +  I   +V           +LK+ +  Y+  + N  ++  W+++Q  + CCG   +RDW    G      VP  CC   E S    Q   +  +  GC E++
Sbjct:    1 MARGCLCCLKYAMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAAN-----------LVIAIGTIVMVTGFLGCLGAIKENRCLLLSFFIVLLIILLAELILIILFFVYMDKVNENAKKDLKEGLLLYNSEN-NVGLKNAWNIIQAEMHCCGVTDYRDWFLVLG---ENTVPDRCCM--ENSQGCGQNNTTLLWRTGCYEKV 194          
BLAST of putative tetraspanin vs. SwissProt
Match: gi|11135332|sp|Q9QY33.1|TSN3_MOUSE (RecName: Full=Tetraspanin-3; Short=Tspan-3; AltName: Full=OSP-associated protein 1; Short=OAP-1; AltName: Full=Tetraspanin TM4-A; AltName: Full=Transmembrane 4 superfamily member 8)

HSP 1 Score: 68.5514 bits (166), Expect = 5.948e-12
Identity = 65/250 (26.00%), Postives = 101/250 (40.40%), Query Frame = 0
Query:   69 MSRCCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLG-FCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRK--VPGSCCRPGEESDCVYQPEGSTAYLDGC----IERMATPLQAAFWAVPTALALVLLLALCVCTRGDRSNR 311
            M +C +  +K +L  +N   W   G L     YVF          I  D        +Y +F  ++ I +G   FI   +GCC    ++RC L +F+ IL +     V  +   YV        +   ++K    Y+  + ++  R   D VQ  L CCG  ++ DW      +  +   VP SCCR   +S        S  Y +GC    ++++   L    WA     A+ LL  LC C    R +R
Sbjct:    1 MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVF----------ITYDDYDHFFEDVYTLFPAVVIIAVGALLFIIGLIGCCATIRESRCGLATFVFILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNSDAASRAI-DYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETAKSCNGSLANPSDLYAEGCEALVVKKLQEILMHVIWAALAFAAIQLLGMLCACIVLCRRSR 239          
BLAST of putative tetraspanin vs. SwissProt
Match: gi|11135123|sp|O60637.1|TSN3_HUMAN (RecName: Full=Tetraspanin-3; Short=Tspan-3; AltName: Full=Tetraspanin TM4-A; AltName: Full=Transmembrane 4 superfamily member 8 >gi|75055210|sp|Q5RE11.1|TSN3_PONAB RecName: Full=Tetraspanin-3; Short=Tspan-3)

HSP 1 Score: 68.5514 bits (166), Expect = 6.294e-12
Identity = 66/254 (25.98%), Postives = 102/254 (40.16%), Query Frame = 0
Query:   69 MSRCCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLGFCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRK--VPGSCCRPGEESDCVYQPEGSTA-----YLDGC----IERMATPLQAAFWAVPTALALVLLLALCVCTRGDRSNR 311
            M +C +  +K +L  +N   W   G L     YVF+            D     E     I  +++  V    FI   +GCC    ++RC L +F+IIL +     V  +   YV        +   ++K    Y+  + ++  R   D VQ  L CCG  ++ DW      +  +   VP SCCR    S+C     GS A     Y +GC    ++++   +    WA     A+ LL  LC C    R +R
Sbjct:    1 MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFIT---------YDDYDHFFEDVYTLIPAVVIIAVGALLFIIGLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNPDAASRAI-DYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRE-TASNC----NGSLAHPSDLYAEGCEALVVKKLQEIMMHVIWAALAFAAIQLLGMLCACIVLCRRSR 239          
BLAST of putative tetraspanin vs. SwissProt
Match: gi|11135148|sp|O75954.1|TSN9_HUMAN (RecName: Full=Tetraspanin-9; Short=Tspan-9; AltName: Full=Tetraspan NET-5)

HSP 1 Score: 67.0106 bits (162), Expect = 1.715e-11
Identity = 60/211 (28.44%), Postives = 93/211 (44.08%), Query Frame = 0
Query:   69 MSRCCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGF-PIRPDLSPENETALYFIFFLMLWIVLGFCFIFT-FLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSCCRPGEESDCVYQPEGSTAYLDGCIERM 277
            M+R CL   K+++F+ N   WL    LL    ++ V+      F P  P LS  N           L I +G   + T FLGC GA  +N+C+L SF I+L V L A +  +   +V           +LK+ +  Y   + N  ++  W+++Q  + CCG   + DW    G      VP  CC   E S    +   +  +  GC E++
Sbjct:    1 MARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAAN-----------LVIAIGTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILLILFFVYMDKVNENAKKDLKEGLLLYHTEN-NVGLKNAWNIIQAEMRCCGVTDYTDWYPVLG---ENTVPDRCCM--ENSQGCGRNATTPLWRTGCYEKV 194          
BLAST of putative tetraspanin vs. SwissProt
Match: gi|2501223|sp|Q28709.2|CD63_RABIT (RecName: Full=CD63 antigen; AltName: CD_antigen=CD63)

HSP 1 Score: 66.6254 bits (161), Expect = 2.102e-11
Identity = 56/218 (25.69%), Postives = 95/218 (43.58%), Query Frame = 0
Query:   74 LDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLGFCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSCCRPGEESDCVYQPEGSTAYLDGCIERMATPLQAAFWAVPTA 291
            +   KFLL+++  A       L+A      V AQ +L   I    +P +   +  I       V  F F+  F+GCCG   +N C++ +F I L + +   V A    YV     ++  + + ++ +  Y   +  +++    D +Q    CCGA ++ DW    G+   R VP SCC     S C  +      Y++GC+E++   L+     V  A
Sbjct:    7 MKCVKFLLYVLLLAFCACAVGLIAVG----VGAQLVLSQTITHGATPGSLLPVVII------AVGAFLFLVAFVGCCGTCKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMSEFNKDFRQQMQNYSTDNQTALI---LDRMQKDFTCCGAANYTDWATIPGMTRDR-VPDSCC-VNVTSGCGVKFNVKDIYVEGCVEKIGLWLRKNVLVVAAA 209          
BLAST of putative tetraspanin vs. SwissProt
Match: gi|81901645|sp|Q8R3S2.1|TSN33_MOUSE (RecName: Full=Tetraspanin-33; Short=Tspan-33; AltName: Full=Penumbra; Short=mPen; AltName: Full=Proerythroblast new membrane)

HSP 1 Score: 65.855 bits (159), Expect = 7.489e-11
Identity = 58/226 (25.66%), Postives = 90/226 (39.82%), Query Frame = 0
Query:   76 LAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLG-FCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYY-DVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGL-----RPGRK---VPGSCCRPGEESDCV------------YQPEGSTAYLDGCIERMAT 279
            L K+LLF  N   W++   ++A   Y             R     E   A   +   +L IV+G   F+ TF GC G+  +N C+L +F + L +     + A    +V        +S  +   I +Y D +DL +++    D  Q    CCG  S+RDW+Q          P R+   VP SCC P      +            Y       Y +GCI+++  
Sbjct:   21 LVKYLLFFFNMLFWVISMVMVAVGVYA------------RLMKHAEAALACLAVDPAILLIVVGVLMFLLTFCGCIGSLRENICLLQTFSLCLTIVFLLQLAAGILGFVFSDKARGKVSEIINNAIVHYRDDLDLQNLI----DFGQKKFSCCGGISYRDWSQNMYFNCSEDNPSRERCSVPYSCCLPTPNQAVINTMCGQGMQALDYLEASKVIYTNGCIDKLVN 230          
BLAST of putative tetraspanin vs. SwissProt
Match: gi|122131848|sp|Q06AA5.1|TSN9_PIG (RecName: Full=Tetraspanin-9; Short=Tspan-9)

HSP 1 Score: 65.0846 bits (157), Expect = 8.675e-11
Identity = 61/211 (28.91%), Postives = 94/211 (44.55%), Query Frame = 0
Query:   69 MSRCCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGF-PIRPDLSPENETALYFIFFLMLWIVLGFCFIFT-FLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSCCRPGEESDCVYQPEGSTAYLDGCIERM 277
            M+R CL   K+++F+ N   WL    LL    ++ V+      F P  P LS  N           L I +G   + T FLGC GA  +NRC+L SF I+L + L A +  I   +V           +LK+ +  Y+  + N  ++  W+++Q  + CCG   + DW    G      VP  CC   E S    +   +  +  GC E++
Sbjct:    1 MARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAAN-----------LVIAIGTIVMVTGFLGCLGAIKENRCLLLSFFIVLLIILLAELILIILFFVYMDKVNENARKDLKEGLLLYNSEN-NVGLKNAWNIIQAEMHCCGVTDYTDWYPVLG---ENTVPDRCCM--ENSQGCGRNSTTPLWKTGCYEKV 194          
BLAST of putative tetraspanin vs. nr
Match: gi|1325268830|ref|XP_023347949.1| (tetraspanin-9-like [Eurytemora affinis])

HSP 1 Score: 96.6709 bits (239), Expect = 6.031e-20
Identity = 59/189 (31.22%), Postives = 106/189 (56.08%), Query Frame = 0
Query:  110 LGFPIRPDLSPENETALYFIFFLMLWIVLGFCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELA--MMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECC--GAESFRDWTQATGLRPGRKVPGSCCRPGEESDCVYQPEGSTAYLDGCIERMATPLQAAFWAVPTALAL 294
            +G  I  +L   N +A+YF   ++L ++L F  +FT LGCCG AC++ CM+GSFI+I FV  G +VG + +++ ++  +    ++  EL +++  Y     + +++  WD      +CC  G E  + W++A  L+P  +VP +CC+P  + +C+Y+P   T  L  CI  +    QA  + +P  + +
Sbjct:    1 MGRNIEYNLQESNPSAIYFTIIIILLVLLSFFSLFTCLGCCGTACKSSCMIGSFIVIEFVLFGGSVGGLVFLHYKYGLDAVQEILDQELSRSVSSYS--QDSVLIKGAWDWFLVTAQCCGVGVEGIKVWSRAD-LKPNYRVPQACCKPNYD-ECMYEPGFETTNLSDCIPILLPFSQALIYGLPVLMLI 185          
BLAST of putative tetraspanin vs. nr
Match: gi|1228377446|ref|XP_021950071.1| (CD63 antigen-like [Folsomia candida] >gi|1228377448|ref|XP_021950072.1| CD63 antigen-like [Folsomia candida] >gi|1228377450|ref|XP_021950073.1| CD63 antigen-like [Folsomia candida] >gi|1215272529|gb|OXA58840.1| CD63 antigen [Folsomia candida])

HSP 1 Score: 97.4413 bits (241), Expect = 1.060e-19
Identity = 80/256 (31.25%), Postives = 122/256 (47.66%), Query Frame = 0
Query:   72 CCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGF----PIRPDLSPENETALYFIFFLMLWIVLG-FCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQ-ATGLRPGRKVPGSCCRPGEES-------DCVYQPEGSTAYLDGCIERMATPLQAAFWAVPTA-LALVLLLALCV-CTRGDRSNRR 312
            C   L KFL+F+ NF  ++  GA L T   +F N     G+     I PDL P       + F  +L IV+G   F+  F+GCCG   +++CM+ ++  +L V L A V  +  MY       ++M   LK ++  Y+    N+ V+  WDL+Q  L+CCG ESF DW    TG      +P SCC   +E+          +  +    Y +GC++++   L+  +     A LA V LL +   C  G R  R+
Sbjct:    3 CATSLVKFLIFLFNFV-FVAGGAALITFGVLFYN-----GYQQYEKILPDLGP-------YAFPPILMIVVGSVVFVIAFMGCCGTIRESKCMMMTYATLLLVLLIAEVTIVVLMYTHQEELKSLMKDGLKTSMGDYEK---NAEVKEAWDLMQSNLKCCGVESFADWQAFITG-----NLPQSCCVNKDETCSGALTQAISFLVDTGKIYTEGCVDKIFKELKTDYGMYSAAILAAVELLGVVFGCCLGARFGRK 237          
BLAST of putative tetraspanin vs. nr
Match: gi|1344799505|ref|XP_023942148.1| (leukocyte surface antigen CD53-like isoform X1 [Bicyclus anynana])

HSP 1 Score: 95.1301 bits (235), Expect = 9.387e-19
Identity = 85/264 (32.20%), Postives = 124/264 (46.97%), Query Frame = 0
Query:   46 GLRTRLHRPETPPARWAGASPAVMSRCCLDLAKFLLFIINFAAWLVCGAL-LATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLGFCFIF-TFLGCCGAACQNRCMLGSFIIILF-VFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSCCR---PGEESDCVYQPEGSTAYLDGCIERMATPLQ---AAFWAVPTALALVLLLAL 300
            G  TR  +     A   G +     RC     K  L IIN    L+ GAL L    +++V+      FP    L   N     FI  + + +V+G   +F + LGCCGAA + +CML ++ I++F +F+   VG I  ++V     L  +  E+  +IPYY V          WD  Q  L+CCG +S++DW           VP SCC+   PG+  DC Y    +T Y+DGC  R    L+       AV   +AL+++LAL
Sbjct:    8 GKSTRKSQMHWSLAMAMGGAMDSCGRC----MKVSLVIINVLT-LIGGALALGIGLWIWVSRS----FP--STLMMNN----MFIASVAVIVVMGAAVMFLSLLGCCGAAKEVKCMLLTYYILVFIIFVVMLVGGI-LLFVFRAKVLTTLEREMHASIPYYGV---KHEYTKAWDDTQTYLQCCGVKSYKDWND--------NVPESCCQEVYPGKRRDCKYSQNPTTMYMDGCYSRTVDLLREDAVYVGAVAIIVALIMVLAL 244          
BLAST of putative tetraspanin vs. nr
Match: gi|1059387508|ref|XP_017768955.1| (PREDICTED: leukocyte surface antigen CD53-like, partial [Nicrophorus vespilloides])

HSP 1 Score: 95.9005 bits (237), Expect = 1.171e-18
Identity = 80/287 (27.87%), Postives = 130/287 (45.30%), Query Frame = 0
Query:   51 LHRPETPPARWAGASPAVMSRCCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLGFCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPG-------RKVPGSCCRPG------EESDCVYQPEGS----TAYLDGCIERMATPLQA---AFWAVPTALALV----LLLALCVCTRGDRSNRRE 313
            L R    P    G    ++   C   AK+ L I+NF  WL+  A++A + ++ ++      F I     P N    Y+I   +L  V     I +FLGCCG+  +++CML SF  IL V L A +  + + Y+   S   ++ + +K T+   +  D++S  R  +D +Q GL+CCGAE   DW  +  +  G         +P SCCR G       ++  V +  G       Y +GCI+++   ++     F  V   +  V    LL +L +     RS R +
Sbjct:   28 LSRVSEKPVGSPGVRIYLIGTMCYRFAKYFLVILNFLFWLLGLAIVALALWMLLDPT----FYISMAQDPNN----YYIGTYILLTVGALLVIVSFLGCCGSCKESQCMLVSFFSILLVVLVAQIATLVWGYINAESLEPLVQSTMKHTVQ-SEYADVDS-RRMAFDTIQKGLQCCGAERPSDWIGSKPVVVGISADPLFYSIPESCCREGIDVQVCRDATKVLKAGGEINTRVIYGEGCIDKVVQVIKTNAITFIIVGVTVIAVEVVGLLFSLILLVSISRSVRYK 304          
BLAST of putative tetraspanin vs. nr
Match: gi|1229729059|ref|XP_022127439.1| (leukocyte surface antigen CD53-like isoform X1 [Pieris rapae])

HSP 1 Score: 93.5893 bits (231), Expect = 4.261e-18
Identity = 59/166 (35.54%), Postives = 90/166 (54.22%), Query Frame = 0
Query:  142 FIFTFLGCCGAACQNRCMLGSFIIILF-VFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSCCR---PGEESDCVYQPEGSTAYLDGCIERMATPLQ---AAFWAVPTALALVLLLAL 300
             + +FLGCCGAA + +CML ++ I++F +F+   VG I  ++V     ++ +  E+  ++P Y V   +   R  WD  Q  L+CCG +S  DW           VP SCC+   PG+  DC Y P  +T Y+DGC+ +    L+   A   AV   +ALV++LAL
Sbjct:   93 MLLSFLGCCGAAKEVKCMLLTYYILVFIIFVAMLVGGI-LLFVFREKVISTLDREMHASMPNYGVK--HEYTRA-WDDTQSHLQCCGVKSHNDWNG--------NVPESCCKEVYPGKRLDCRYSPNPTTMYMDGCLNKTIDLLREDAAYVGAVAIIVALVMVLAL 246          
BLAST of putative tetraspanin vs. nr
Match: gi|1061477543|gb|ODM95263.1| (CD63 antigen [Orchesella cincta])

HSP 1 Score: 92.8189 bits (229), Expect = 5.184e-18
Identity = 71/254 (27.95%), Postives = 117/254 (46.06%), Query Frame = 0
Query:   72 CCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFF----LMLWIVLGFCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELA-MMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSCC---RPGEESDCVYQPEG--STAYLDGCIERMATPLQAAFWAVPTALA-----LVLLLALCVCTRGDRSN 310
            C   + KFL+F+ NF    V G +L  +F       G++      D   E E  +    F    ++L +V G  F+  F+GCCG   +N CM+ ++ + L + L   VG IA     +  E   ++   + K+I  Y   D    V+  WD +Q  L CCG++S+ DW++ TG      VP SCC    PG     +  P+   +T Y +GC+ ++ + ++  +     A+      L ++ A C+  R  R N
Sbjct:    3 CATGIVKFLMFLFNFV--FVVGGVLLITF-------GVMALTGYQDFQQEYEHVVKVDSFKAPPIILIVVGGAVFLIAFMGCCGVLRENNCMMMTYAVFLTIILLVQVG-IAVAAALYEDEFKEVLQKGMSKSIEKYSTADE---VKKTWDAMQSNLHCCGSDSYNDWSK-TG-----HVPESCCLKQAPGCSDGVLGSPDKAETTIYTEGCVNKILSDVKIKYVVYTAAVIAGVELLGIVFACCLAARFRRKN 237          
BLAST of putative tetraspanin vs. nr
Match: gi|1344799507|ref|XP_023942149.1| (leukocyte surface antigen CD53-like isoform X2 [Bicyclus anynana])

HSP 1 Score: 92.4337 bits (228), Expect = 5.659e-18
Identity = 78/232 (33.62%), Postives = 115/232 (49.57%), Query Frame = 0
Query:   78 KFLLFIINFAAWLVCGAL-LATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLGFCFIF-TFLGCCGAACQNRCMLGSFIIILF-VFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSCCR---PGEESDCVYQPEGSTAYLDGCIERMATPLQ---AAFWAVPTALALVLLLAL 300
            K  L IIN    L+ GAL L    +++V+      FP    L   N     FI  + + +V+G   +F + LGCCGAA + +CML ++ I++F +F+   VG I  ++V     L  +  E+  +IPYY V          WD  Q  L+CCG +S++DW           VP SCC+   PG+  DC Y    +T Y+DGC  R    L+       AV   +AL+++LAL
Sbjct:   15 KVSLVIINVLT-LIGGALALGIGLWIWVSRS----FP--STLMMNN----MFIASVAVIVVMGAAVMFLSLLGCCGAAKEVKCMLLTYYILVFIIFVVMLVGGI-LLFVFRAKVLTTLEREMHASIPYYGV---KHEYTKAWDDTQTYLQCCGVKSYKDWND--------NVPESCCQEVYPGKRRDCKYSQNPTTMYMDGCYSRTVDLLREDAVYVGAVAIIVALIMVLAL 223          
BLAST of putative tetraspanin vs. nr
Match: gi|1229729061|ref|XP_022127441.1| (CD151 antigen-like isoform X2 [Pieris rapae])

HSP 1 Score: 91.2781 bits (225), Expect = 1.363e-17
Identity = 59/166 (35.54%), Postives = 90/166 (54.22%), Query Frame = 0
Query:  142 FIFTFLGCCGAACQNRCMLGSFIIILF-VFLGANVGAIAYMYVEFPSELAMMSAELKKTIPYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSCCR---PGEESDCVYQPEGSTAYLDGCIERMATPLQ---AAFWAVPTALALVLLLAL 300
             + +FLGCCGAA + +CML ++ I++F +F+   VG I  ++V     ++ +  E+  ++P Y V   +   R  WD  Q  L+CCG +S  DW           VP SCC+   PG+  DC Y P  +T Y+DGC+ +    L+   A   AV   +ALV++LAL
Sbjct:   64 MLLSFLGCCGAAKEVKCMLLTYYILVFIIFVAMLVGGI-LLFVFREKVISTLDREMHASMPNYGVK--HEYTRA-WDDTQSHLQCCGVKSHNDWNG--------NVPESCCKEVYPGKRLDCRYSPNPTTMYMDGCLNKTIDLLREDAAYVGAVAIIVALVMVLAL 217          
BLAST of putative tetraspanin vs. nr
Match: gi|1126185716|ref|XP_019625538.1| (PREDICTED: CD151 antigen-like isoform X2 [Branchiostoma belcheri])

HSP 1 Score: 90.8929 bits (224), Expect = 2.943e-17
Identity = 69/227 (30.40%), Postives = 97/227 (42.73%), Query Frame = 0
Query:   72 CCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLGFCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIP--YYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGR-----KVPGSCCRPGEESDCVYQPEG-----STAYLDGCIERMATPLQAAFW 286
            C L   K+LLFI NF  W+  G +LA   ++ ++         R    P      Y I    L  V GF F+  FLGCCGA  +++CMLG +  +L V     VGA    Y         M + + +TI   Y  V  + + V +    +Q  ++CCG  S+ DW      + G+      VP SCCR   E+ C     G     S  +  GCI  M   +Q   W
Sbjct:    3 CGLTCVKYLLFIFNFIFWVAGGGVLAIGIWMRID---------RATFDPLLGIDYYPIVCWTLIGVGGFVFLVGFLGCCGAVQESKCMLGFYFFLLIVVFVGEVGAGILAYYYHDEVRTWMDSHMNRTIKNNYGFVPAVTAAVNS----MQEQMKCCGDRSYVDWMSTKYFKEGKAPANTSVPVSCCRDKTEAGCNRGQPGQPADISKIFTQGCIPSMELWVQEQVW 216          
BLAST of putative tetraspanin vs. nr
Match: gi|1126185714|ref|XP_019625537.1| (PREDICTED: CD151 antigen-like isoform X1 [Branchiostoma belcheri])

HSP 1 Score: 90.5077 bits (223), Expect = 3.874e-17
Identity = 69/227 (30.40%), Postives = 97/227 (42.73%), Query Frame = 0
Query:   72 CCLDLAKFLLFIINFAAWLVCGALLATSFYVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLGFCFIFTFLGCCGAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTIP--YYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGR-----KVPGSCCRPGEESDCVYQPEG-----STAYLDGCIERMATPLQAAFW 286
            C L   K+LLFI NF  W+  G +LA   ++ ++         R    P      Y I    L  V GF F+  FLGCCGA  +++CMLG +  +L V     VGA    Y         M + + +TI   Y  V  + + V +    +Q  ++CCG  S+ DW      + G+      VP SCCR   E+ C     G     S  +  GCI  M   +Q   W
Sbjct:    3 CGLTCVKYLLFIFNFIFWVAGGGVLAIGIWMRID---------RATFDPLLGIDYYPIVCWTLIGVGGFVFLVGFLGCCGAVQESKCMLGFYFFLLIVVFVGEVGAGILAYYYHDEVRTWMDSHMNRTIKNNYGFVPAVTAAVNS----MQEQMKCCGDRSYVDWMSTKYFKEGKAPANTSVPVSCCRDKTEAGCNRGQPGQPADISKIFTQGCIPSMELWVQEQVW 216          
The following BLAST results are available for this feature:
BLAST of putative tetraspanin vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAG000000035063.214e-1530.26supercontig:LSalAtl2s:LSalAtl2s191:170365:186205:-... [more]
EMLSAG000000082472.789e-1224.39supercontig:LSalAtl2s:LSalAtl2s498:206287:219492:1... [more]
EMLSAG000000071421.358e-926.13supercontig:LSalAtl2s:LSalAtl2s402:410135:415370:1... [more]
EMLSAG000000092685.645e-825.13supercontig:LSalAtl2s:LSalAtl2s58:698204:699085:1 ... [more]
EMLSAG000000111441.934e-722.09supercontig:LSalAtl2s:LSalAtl2s757:42372:43082:-1 ... [more]
back to top
BLAST of putative tetraspanin vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|82184085|sp|Q6GMK6.1|TSN9_DANRE5.931e-1330.08RecName: Full=Tetraspanin-9; Short=Tspan-9[more]
gi|131775|sp|P27701.1|CD82_HUMAN1.727e-1228.72RecName: Full=CD82 antigen; AltName: Full=C33 anti... [more]
gi|122140274|sp|Q3SZR9.1|TSN3_BOVIN4.119e-1225.30RecName: Full=Tetraspanin-3; Short=Tspan-3[more]
gi|238055384|sp|B3VSC2.1|TSN9_SHEEP4.231e-1229.86RecName: Full=Tetraspanin-9; Short=Tspan-9; AltNam... [more]
gi|11135332|sp|Q9QY33.1|TSN3_MOUSE5.948e-1226.00RecName: Full=Tetraspanin-3; Short=Tspan-3; AltNam... [more]
gi|11135123|sp|O60637.1|TSN3_HUMAN6.294e-1225.98RecName: Full=Tetraspanin-3; Short=Tspan-3; AltNam... [more]
gi|11135148|sp|O75954.1|TSN9_HUMAN1.715e-1128.44RecName: Full=Tetraspanin-9; Short=Tspan-9; AltNam... [more]
gi|2501223|sp|Q28709.2|CD63_RABIT2.102e-1125.69RecName: Full=CD63 antigen; AltName: CD_antigen=CD... [more]
gi|81901645|sp|Q8R3S2.1|TSN33_MOUSE7.489e-1125.66RecName: Full=Tetraspanin-33; Short=Tspan-33; AltN... [more]
gi|122131848|sp|Q06AA5.1|TSN9_PIG8.675e-1128.91RecName: Full=Tetraspanin-9; Short=Tspan-9[more]

Pages

back to top
BLAST of putative tetraspanin vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325268830|ref|XP_023347949.1|6.031e-2031.22tetraspanin-9-like [Eurytemora affinis][more]
gi|1228377446|ref|XP_021950071.1|1.060e-1931.25CD63 antigen-like [Folsomia candida] >gi|122837744... [more]
gi|1344799505|ref|XP_023942148.1|9.387e-1932.20leukocyte surface antigen CD53-like isoform X1 [Bi... [more]
gi|1059387508|ref|XP_017768955.1|1.171e-1827.87PREDICTED: leukocyte surface antigen CD53-like, pa... [more]
gi|1229729059|ref|XP_022127439.1|4.261e-1835.54leukocyte surface antigen CD53-like isoform X1 [Pi... [more]
gi|1061477543|gb|ODM95263.1|5.184e-1827.95CD63 antigen [Orchesella cincta][more]
gi|1344799507|ref|XP_023942149.1|5.659e-1833.62leukocyte surface antigen CD53-like isoform X2 [Bi... [more]
gi|1229729061|ref|XP_022127441.1|1.363e-1735.54CD151 antigen-like isoform X2 [Pieris rapae][more]
gi|1126185716|ref|XP_019625538.1|2.943e-1730.40PREDICTED: CD151 antigen-like isoform X2 [Branchio... [more]
gi|1126185714|ref|XP_019625537.1|3.874e-1730.40PREDICTED: CD151 antigen-like isoform X1 [Branchio... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold84_size396325supercontigscaffold84_size396325:69707..74527 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:integral to membrane
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold84_size396325-snap-gene-0.16-mRNA-1maker-scaffold84_size396325-snap-gene-0.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold84_size396325:69707..74527+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold84_size396325-snap-gene-0.16 ID=maker-scaffold84_size396325-snap-gene-0.16|Name=putative tetraspanin|organism=Tigriopus kingsejongensis|type=gene|length=4821bp|location=Sequence derived from alignment at scaffold84_size396325:69707..74527+ (Tigriopus kingsejongensis)
ATGTCCTACTTCGGGCCTCCTAGTAGGTGTTTCTGATCAATAGAATCAAG ACATGTTTTCAATGAAGCAATCTAATATTGATCATATTGATGGCGGTTCT GATTTCGACGTAATCCACCCATTTGTCTATCACCCTGGTCTTTTTGGGGT GGTTGAGCGCCCTCGCTGAGCTGGGTACTCAAAGCTTAGCAAGCAGCTTC ATGGGCCAGCCTGAAGATTTGAGACAGAGAAGATCACTCTTGTACGGGCT GGGTCGACAGGATCGCCATCCGGAGGAGGCCAGGTTCAGCGTTCAGTCAG TTTTGGTCACAATTTAACTGGATGATAGCCAAAACTGTGCTTCATTGTAC ACAACCAACAAAGTCTTGCTCTTTCATAGTTGTATAGTATATCTAATTAT GAACTGGTACTGTTGATTGACTTGTATATTGTCCGTATACAGGGTGCCCC ACAAAAATTTGCCAAGGACAGTTGCCATGCAATTTTGAAAAATTGTATTT ATTTGATGAAAGACGTATTTATTGAGAGTTTTTTAAGCTTAGGGGAATTT TGCTCGCTTCAAAGTTATGCCACATCACGGCCAGTATTTTTCAACATGTT CTCTCGGCTTGGTGGAACGCAGATTGTCCGCATTAAAGGAGGGATGGGCA CTGTCACACATTCTGATTACCATGCCAAAAGAACAGACCATGTAACTACG CTCGAAAGCTTCAAGTACCATTGCCTCCCCCAAGTCAATCCGGTCTTAAA ATGCGAACCATGGTTGAACTGTGGAATCGGGCCATCTCTCATGGCCAGGT CGCCAATTGTAGTATTGCACTTGTTACGAACAGATTGCCATGTTAATCAG TTCCTTGCAACTGAAATCCCGTGCTTTTGTTACGACTAGTCTTGCCAATG CCAAACCGACGATTTGTAGCTAAACATCTATAGCCTATTTCACTCAGTTA TCGAAAAATTAAAAACATCTGTTAAACACATTATCTAGGAGCCACCATAG CTCAGTGTCAGCGAGCGCTGCGCTGGTGCTGAGTGGCCGGGGTTCGAATC CCGGGCTTCCCCAGTTCACGGCAACTAGTGGTGTTCACTCACAGCTATTG TTTGCTTCCGTTGCGGGATTAAATTGGACGGACCTGTGGTAATTCCTCGA GGGTAAGGTAATAATTCATGATAAATTTGAACGCCAGGCTGACTATGTCT CAATAGAGATTTCCTAACTGGACAGAAATGTCCGGGGCGTTCCAAACAAA CAAACAAACACATTATCTGATTTTGGACAGTTTATAATGACCATCAAAAG TGAGCATTCGCTTCAAATACATGCATACAAAATCTTCGGGATTTGTATTC CAATGCAGCCTTGAAGGCTGTGACCAAGGCAGGAGCGCTAGGGCATGTTT GTACCCCTCAAAAATTGCCAAAGCAGAAAAGTATGCAACATGTTTTCCAT CGTTTCTCTTTTCCCTACCCATGTTTTCCTCCCAATTCAGGGATACAAAA GGCACACAATGGGAAAGGAATAGTATGTCAAAATGAGCCGCCAAGGGTGT GTGTGTAATCGTTTATTCCTACATATAAAAAAAAGGTTTATTTGCCCCAG AGTCAACACTTAGCATTCGAATACTAGTCAATAGTGTTAGGGCCATTTAT AAATAAAATATGCACATTAATAAAAACAAAGATACTGTAGACAACATTGC AGCCAACTATACAAAACAGAACAACTCAATAATGGGAACACAATAAACGT CATGTCTCAAATGCATTGCTTCAAGCAGGAAAAATCCTCAGACCCAATTC GAACACTGACTGATCCAACACAATCATATCAGACGAGACGAGAAATTTGG CCATATTCCACCCTCCTCTTTGGCCACAAAGTGGAGCGAGCAAGTGGCAG TCCTGGCTGGTGGTCCCACTCATTTGTGTTCCAGAATTAGGTGACCACCG CCGCCACCACCGCCGCCACCACCGCCGCCACCACCGGGGATCACAACATC GGAACTCACGCGGGCTAGTGGTTGCACCCCTGGAACCGAACAAGAGGGGG CTTCGAACCCGCCTCCATCGCCCTGAGACCCCCCCAGCCCGTTGGGCGGG AGCCTCGCCGGCCGTCATGTCGCGGTGCTGCCTGGACTTGGCCAAGTTCC TCCTGTTCATCATCAACTTTGCCGCCTGGGTGAGTTAGCACATGGCTGTT CATTGAGGGGGGCTCGCGGTCTCATGTTGGCATCTCTCTCTGGGGTCTAG TTGGTCTGCGGGGCCCTCCTGGCCACCAGCTTCTACGTGTTCGTGAACGC CCAGGGCCTCTTGGGCTTCCCCATCCGCCCGGACCTGTCGCCCGAGAATG AGACGGCGCTCTACTTCATCTTCTTCCTCATGCTCTGGATCGTGCTCGGA TTCTGCTTCATCTTCACCTTCTTGGGCTGTTGCGGGGCCGCCTGTCAAAA CCGATGCATGCTAGGTAGAGTAAATCTTACGACTACTTGGACGAAACTGG GTGAGGACACCCGCATATAAAGGTCCCGGGACTCCACTCGAGGCTAGAGG GGGATATCATTGCTTTCAAAGACTGAATTCAGATTACTTTTCACATGCCG ACCAGAGGCCAATCATTCCGGATCACTCCCAAATCATTAGACACATTCCC CAGCCCCGGAAAGTGGCCTTGATTACATTTCAGCCAGGCCCACAACTATT CCCCTCAAGCGTTGGTTCGCATGATGAAAACATGGCATAGCCTAATGACT CATAGTAAAGCGTGTAAAAAGATGAATCACTCGATTGAAACCGTGTTTGG CCACCTGTCTAAATTGTTAGGGCAAGTTTTTTTGGCCAATATTATCCTAT TTTTAATAGATTTTGATTTAATTTATGAACGACCCAAACCCAGCGGCTGG GGGCCCTAAATATTACCTGAAACGACTGGTTTGGGATAAACCTTGGGAGT GATAATGAGTTCGACTTGGGGGCGAGAAATGTTCGATTGGGTCAAACAAT TTGAGCTTTGTGATGGCTGATGAGTGAAATACCTGTTTTGACTATCATGC TCGCCGAGTATCATTATTACCAGAGAAGAACCTCGGTAATTCAAAGCCAG TAGTTGGGCTGTTTTGACCTTTTTTTTACCCCCGTGAAAATGACATTTGC ACCTGAGGTTTCCTCCCGCTCTTTTCATCAGAGATGCGATGGTTGGTATG CCCCGTTATTGAACAGAAGCAAAAACGTCGATAGGCTGCCTATCTTGGAC AAAGCAGAAAACCAACTATACCCATGATGCGCAATCTGCCCAAAGTTCAA ATGCTCCGTGGCACGATTTGCACGTGGATGTGATTGCAACTTACTCTGAC ATTTTAACACTATTTTTGTAAGAGTCATTGGGAATTGAATTAGATGTTTC CCCCCCCCCCCCCGTGTCTTCAACGTATCTTGGGTTCCGTCATGTGGAAC CCAGTGAACCCAGTGGGCATCGCCCAGTAGCTGATGACCTCCATTATTGT CTCCACAGGGTCGTTTATCATCATTCTCTTCGTGTTCCTGGGGGCCAACG TGGGCGCCATTGCCTACATGTACGTCGAGTTCCCCTCCGAGCTGGCCATG ATGAGTGCCGAGTTGAAGAAGACCATCCCCTACTACGACGTGGTGGATCT TAACTCGATCGTGCGCACCTTTTGGGACCTGGTCCAACCCGGGCTCGAAT GCTGCGGGGCCGAGAGTTTTCGGGACTGGACTCAAGCCACGGGTCTCAGG CCCGGACGGAAAGTCCCGGGCTCGTGCTGCCGCCCCGGAGAGGAGTCGGA CTGCGTGTACCAGCCCGAGGGTAGTACCGCCTACCTGGACGGCTGCATCG AGCGCATGGCCACACCTCTCCAGGCGGCCTTCTGGGCTGTGCCAACCGCC CTGGCCTTGGTCCTCCTCCTCGCCCTCTGCGTCTGCACCCGTGGCGACCG CAGCAACCGCCGAGAGCGCTCGGCCGCCGGCCCGCGGCGGCGGAACAAGC GCGCCGACTCGCAGCTGAGTCAATATTCTGAGGAAACCGGGTACATCTAC CGCGGCGGTCAGGAGGCCCTTGCCGCCTATCCCAGTGCCCCGCCTTACCA CGGCGACGTGGATCCGCGTCGTGTGGATTCCTATCCCACGGGCGTAATAC CCCCCAGCGGGCATGACTACCACCAGCCCCTCATACAGCCCCCATCCTAT CACGATGTGATGGCCCGGCGGAACAATCACTATTGAGCTAATGGTCGATT ACCGTGCAATCAACCCCCAAAGAATGCCCAGACTCGGGGGCGAGGAGCGA GTGCCGGTTCAGATCCAGCCTTCCTCATTCATACTGTTTCCCACCCGCTT TCATTCCGACCCAACAATTCTCAGCCAGCTTTCGCCCCCTGAATATTGCA GGCGACATTCCCAATGATCCAGACCAGGGCGAGGGATCCCCTTGACGGAG ATCCCTCGGCCACGGCTCCTCTACTTGCCACGATGACGCCATTTGCTCAA ACGCCACCTTTGCACACACCCAAATCAAATATGAGCATTTAGCCCTTTCA TACCCTCAATAGCCGATATTTTTTCACTCAAACCAAACACACATGTGGGG TTGATGATGCGTTGGTCGTTCTTTGAAGTAGAGTATCTTTTAGATTTTTA TCATATCCAATCTTGTAAAATAGTTGTCAGATTCGAAGCCAACCTTTGAA ATTACCAGCATTCTTATATGTATGAAACCTAGTTTCTTCCGAGTTTTCTT ATTCCCCCCATGATGATCGTTGCCAACTATTGTACAAAAATGTGTAATCA ATTCGAGAAATACATGACCTT
back to top
Synonyms
The feature 'putative tetraspanin' has the following synonyms
Synonym
Tk09670
Add to Basket