Rab, maker-scaffold55_size446313-snap-gene-3.25 (gene) Tigriopus kingsejongensis

Overview


Name	Rab
Unique Name	maker-scaffold55_size446313-snap-gene-3.25
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of Rab vs. L. salmonis genes
Match: EMLSAG00000005111 (supercontig:LSalAtl2s:LSalAtl2s26:918032:918799:-1 gene:EMLSAG00000005111 transcript:EMLSAT00000005111 description:"augustus_masked-LSalAtl2s26-processed-gene-8.9")

HSP 1 Score: 290.426 bits (742), Expect = 2.638e-100
Identity = 155/253 (61.26%), Postives = 184/253 (72.73%), Query Frame = 0

Query:   14 ASKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRT--------------------------------ITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNC--DVVNRILVGNKSD-DPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQ-DQLNQP----------KESIRVGVR-RPGQRP--SKKSGCC 217
            + +DYDHLFKLLIIGDSGVGKSSLL+RFADN+F+GNYITTIGVDFKIRT+EV GERVKLQIWDTAGQERFRT                                IT+TYYRGTHGVIVVYDV++G+SFANVKRWLHEIDQNC  +VV+R LVGNK+D D  +KVVLTEDA+RF++QM I+LFETSAK+N NVEEMF+S+TELVLKSK+     + + P             I++G + RPG +    K+SGCC
Sbjct:    2 SGRDYDHLFKLLIIGDSGVGKSSLLLRFADNSFTGNYITTIGVDFKIRTLEVNGERVKLQIWDTAGQERFRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITATYYRGTHGVIVVYDVSNGESFANVKRWLHEIDQNCSSEVVSRXLVGNKNDGDTAKKVVLTEDAKRFSDQMGIRLFETSAKENFNVEEMFKSLTELVLKSKKEAALSESSYPYGNGASSGGVAGGIKIGGKSRPGHKSQTQKRSGCC 254

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BLAST of Rab vs. L. salmonis genes
Match: EMLSAG00000001458 (supercontig:LSalAtl2s:LSalAtl2s1248:131241:136261:1 gene:EMLSAG00000001458 transcript:EMLSAT00000001458 description:"maker-LSalAtl2s1248-augustus-gene-0.13")

HSP 1 Score: 221.861 bits (564), Expect = 5.038e-74
Identity = 113/205 (55.12%), Postives = 149/205 (72.68%), Query Frame = 0

Query:   17 DYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQ-NCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRP-SKKS--GCC 217
            +YD+LFKLL+IGDSGVGKS LL+RFAD+T++ +YI+TIGVDFKIRTIE+ G+ +KLQIWDTAGQERFRTITS+YYRG HG+IVVYDVT  DSF N+K+WL EID+  C+ VN++LVGNK D   +KVV    A+ +A+Q+N+   E SAK+  NVE+ F ++   +       ++++  P  S   G  +    P S KS  GCC
Sbjct:    4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEI-------KNRVGPPAPSGPSGQVKIDSTPVSSKSGTGCC 201

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BLAST of Rab vs. L. salmonis genes
Match: EMLSAG00000009511 (supercontig:LSalAtl2s:LSalAtl2s612:149458:156023:-1 gene:EMLSAG00000009511 transcript:EMLSAT00000009511 description:"maker-LSalAtl2s612-snap-gene-1.42")

HSP 1 Score: 192.2 bits (487), Expect = 1.715e-59
Identity = 89/186 (47.85%), Postives = 131/186 (70.43%), Query Frame = 0

Query:   13 HASKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDV-VNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKE 197
              +K YD+LFKLL+IGDSGVGK+ +L RF+++ F+  +I+TIG+DFKIRTIE+ G+++KLQIWDTAGQERFRTIT+ YYRG  G+++VYD+T+  SF N+K W+  I+++    V ++++GNK D  DR+ V  E     A +  I+  ETSAK +INVEE F ++   +      + +  N P++
Sbjct:   41 EMAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILGNKCDINDRRKVTKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLEASNPPRQ 226

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BLAST of Rab vs. L. salmonis genes
Match: EMLSAG00000003190 (supercontig:LSalAtl2s:LSalAtl2s1770:8657:11199:-1 gene:EMLSAG00000003190 transcript:EMLSAT00000003190 description:"augustus_masked-LSalAtl2s1770-processed-gene-0.0")

HSP 1 Score: 180.259 bits (456), Expect = 1.805e-57
Identity = 88/205 (42.93%), Postives = 134/205 (65.37%), Query Frame = 0

Query:   14 ASKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQ-NCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            A +++D++FKLLIIG+S VGK+S L R+AD++F+  +++T+G+DFK++T+  + +RVKLQIWDTAGQER+RTIT+ YYRG  G I++YDVT+ DSF +V  W  +I   + D    ILVGNK D  D +V+  E  ++ A+ + ++ FETSAK+NINV   F  + +++        D  +    +   G R    +PS  +  C
Sbjct:   14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNHVHDWCTQIKTYSWDNAQVILVGNKCDMEDERVISFERGKQLADSLGLEFFETSAKENINVRAXFERLVDIICDKMSESLDS-DPSIXNANKGARLDSAQPSNVNCNC 217

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BLAST of Rab vs. L. salmonis genes
Match: EMLSAG00000003241 (supercontig:LSalAtl2s:LSalAtl2s178:231454:232215:-1 gene:EMLSAG00000003241 transcript:EMLSAT00000003241 description:"augustus_masked-LSalAtl2s178-processed-gene-2.6")

HSP 1 Score: 169.088 bits (427), Expect = 2.615e-53
Identity = 83/166 (50.00%), Postives = 120/166 (72.29%), Query Frame = 0

Query:   22 FKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEID---QNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKS 184
             KLLIIG+SGVGKSSLL+RF ++ F  ++  TIGVDFK++T+ V+G RVKL IWDTAGQERFRT+T +YYRG  G I+VYDVT+ DSF+NV+ WL+E+D    N D+V ++LVGNK D  +++ +  E+ ++ A +  +   E+SAK    V+  F  + E ++++
Sbjct:   10 LKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVENWLNELDTYATNHDIV-KMLVGNKCDLEEKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVENIIQT 174

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BLAST of Rab vs. L. salmonis genes
Match: EMLSAG00000012618 (supercontig:LSalAtl2s:LSalAtl2s94:53587:63698:1 gene:EMLSAG00000012618 transcript:EMLSAT00000012618 description:"maker-LSalAtl2s94-augustus-gene-0.17")

HSP 1 Score: 154.836 bits (390), Expect = 2.663e-45
Identity = 81/206 (39.32%), Postives = 126/206 (61.17%), Query Frame = 0

Query:   16 KDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDV-VNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSIT-ELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCCGK 219
            +DY +LFK++++G++GVGK+ L+ +     F      TIGVDF I+T+E++GE++KLQIWDTAGQER R+IT +YYR  H +I+V+DV++  +F +   WL EI++     V ++LVGNK+D  DR++   E    FA + ++   ETSAK   NVE +F  I  EL+ ++K  +    +   + I     +PG        CC +
Sbjct:  233 EDYKYLFKVVLVGNAGVGKTCLVRQXTQGMFPPGQGATIGVDFMIKTLEIQGEKIKLQIWDTAGQERXRSITQSYYRSAHALILVFDVSNQPTFDSCPEWLREIEEYASPKVLKVLVGNKTDRDDREIP-EEIGEDFAQRYSMYYLETSAKSCDNVERLFVEIAQELLQQAKSKELPSYSNSAQQI----LQPGSSSEVNKKCCQR 433

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BLAST of Rab vs. L. salmonis genes
Match: EMLSAG00000002040 (supercontig:LSalAtl2s:LSalAtl2s136:216604:221557:1 gene:EMLSAG00000002040 transcript:EMLSAT00000002040 description:"maker-LSalAtl2s136-augustus-gene-2.7")

HSP 1 Score: 140.198 bits (352), Expect = 7.986e-42
Identity = 76/213 (35.68%), Postives = 122/213 (57.28%), Query Frame = 0

Query:    8 MALGGHASKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEI--DQNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVG--VRRPGQRPSKKSGC 216
            MA  G  S      FKL+ +G+  VGK+SL+ RF  ++F   Y  TIG+DF  +T+ +    V+LQ+WDTAGQERFR++  +Y R +   +VVYD T+ +SF    +W+ ++  ++  DV+  +LVGNK+D  +++ V TED  R A ++N+   ETSAK   NV+ +FR +   +     +  DQ       ++    + +P    + +SGC
Sbjct:    1 MAXSGEXSNPLRK-FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDTTNANSFHQTSKWIDDVRTERGSDVI-IMLVGNKTDLSEKRQVPTEDGERKAKELNVMFIETSAKAGYNVKLLFRRVAAXLPGMDSSSADQGANTTGGLKTVELIEKPIPEQTMESGC 211

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BLAST of Rab vs. L. salmonis genes
Match: EMLSAG00000005149 (supercontig:LSalAtl2s:LSalAtl2s272:1903:7665:1 gene:EMLSAG00000005149 transcript:EMLSAT00000005149 description:"snap_masked-LSalAtl2s272-processed-gene-0.5")

HSP 1 Score: 136.732 bits (343), Expect = 9.586e-41
Identity = 79/187 (42.25%), Postives = 109/187 (58.29%), Query Frame = 0

Query:   12 GHASKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDV-VNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKE 197
            G+  ++YD+LFK+++IGDSGVGK  LL  +           T+G         V G+ VK QIWDTAGQER+R ITS YYRG  G ++VYD+    ++ NV RWL E+  + D  +  +LVGNK D    + V T++A+ FA Q N+   ETSA D+ NVE  F +I   + +     Q QL +P E
Sbjct:    2 GNRDEEYDYLFKVVLIGDSGVGKMILLCTY-----------TVGEKI------VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIV--SQRQLREPAE 169

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BLAST of Rab vs. L. salmonis genes
Match: EMLSAG00000011153 (supercontig:LSalAtl2s:LSalAtl2s759:225438:227635:-1 gene:EMLSAG00000011153 transcript:EMLSAT00000011153 description:"maker-LSalAtl2s759-augustus-gene-2.13")

HSP 1 Score: 131.724 bits (330), Expect = 9.519e-39
Identity = 73/189 (38.62%), Postives = 107/189 (56.61%), Query Frame = 0

Query:   22 FKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEID-QNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQR 209
            FKL+++G+S VGKSSL++RF    F     +TIG  F  +TI +    VK +IWDTAGQER+ ++   YYRG    IVVYDVT+ DSF   K W+ E+  Q    +   L GNK+D   +++V+ E+A+ +A +  +   ETSAK  +NV ++F  I + +             PK+     V+  GQR
Sbjct:   22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDVTNQDSFIRAKNWVKELQRQASPNIVIALAGNKADLNTKRLVIYEEAQTYAEENGLLFMETSAKTALNVNDVFLEIAKKL-------------PKDGDSSNVQSGGQR 197

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BLAST of Rab vs. L. salmonis genes
Match: EMLSAG00000000624 (supercontig:LSalAtl2s:LSalAtl2s109:73593:97815:1 gene:EMLSAG00000000624 transcript:EMLSAT00000000624 description:"maker-LSalAtl2s109-augustus-gene-1.21")

HSP 1 Score: 140.969 bits (354), Expect = 9.632e-39
Identity = 77/192 (40.10%), Postives = 118/192 (61.46%), Query Frame = 0

Query:   18 YDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVR-GERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVN--RILVGNKSD----DPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVG 202
            +++ F+L++IGDS VGKSSLL  F D +F      T+G+DF  + + V+ G  +KL +WDTAGQERFR+IT +YYR T   +++YDV + DSF ++  W+HE  ++ +      ILVG K D    +P  + V TE+AR FA    +Q  ETSA+   NV+  FR +T+ +    +N + +L+   + I+ G
Sbjct: 1461 FEYQFRLILIGDSTVGKSSLLKYFTDGSFGEVSDPTVGIDFFAKLLPVKDGNVMKLLLWDTAGQERFRSITRSYYRNTVAALLIYDVCNRDSFTHIPNWMHEAGKHMEPSKCVFILVGCKYDMAENNPGVREVPTEEARTFAELHGLQFLETSARTGHNVDNAFRLLTQEIYDKLKNGKFELDPDWDGIKKG 1652

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BLAST of Rab vs. SwissProt
Match: gi|3024525|sp|Q15286.1|RAB35_HUMAN (RecName: Full=Ras-related protein Rab-35; AltName: Full=GTP-binding protein RAY; AltName: Full=Ras-related protein Rab-1C >gi|62900797|sp|Q5U316.1|RAB35_RAT RecName: Full=Ras-related protein Rab-35 >gi|62901088|sp|Q6PHN9.1|RAB35_MOUSE RecName: Full=Ras-related protein Rab-35)

HSP 1 Score: 308.916 bits (790), Expect = 5.922e-107
Identity = 150/203 (73.89%), Postives = 174/203 (85.71%), Query Frame = 0

Query:   15 SKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            ++DYDHLFKLLIIGDSGVGKSSLL+RFADNTFSG+YITTIGVDFKIRT+E+ GE+VKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS +SF NVKRWLHEI+QNCD V RILVGNK+DDP+RKVV TEDA +FA QM IQLFETSAK+N+NVEEMF  ITELVL++K+   D L + ++  +  V +  +   +K  CC
Sbjct:    2 ARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKK---DNLAKQQQQQQNDVVKLTKNSKRKKRCC 201

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BLAST of Rab vs. SwissProt
Match: gi|141302|sp|P11620.2|YPT1_SCHPO (RecName: Full=GTP-binding protein ypt1)

HSP 1 Score: 233.032 bits (593), Expect = 6.229e-77
Identity = 118/203 (58.13%), Postives = 151/203 (74.38%), Query Frame = 0

Query:   17 DYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNC-DVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSG-CC 217
            +YD+LFKLL+IGDSGVGKS LL+RFAD+T++ +YI+TIGVDFKIRT E+ G+ VKLQIWDTAGQERFRTITS+YYRG HG+I+VYDVT  DSF NVK+WL EID+   + VNR+LVGNKSD  D+KVV    A+ FA+ +NI   ETSAKD+ NVE+ F +++  + +   N     +  K S++VG    G   S+ S  CC
Sbjct:    4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKVG---QGTNVSQSSSNCC 203

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BLAST of Rab vs. SwissProt
Match: gi|2500076|sp|Q01890.1|YPT1_PHYIN (RecName: Full=Ras-like GTP-binding protein YPT1)

HSP 1 Score: 232.646 bits (592), Expect = 7.748e-77
Identity = 115/204 (56.37%), Postives = 151/204 (74.02%), Query Frame = 0

Query:   17 DYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQ-NCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSG--CC 217
            +YD+LFKLL+IGDSGVGKS LL+RFAD+T++ +YI+TIGVDFKIRTIE+ G+ +KLQIWDTAGQERFRTITS+YYRG HG+IVVYDVT  +SF NVK+WLHEID+  C+ VN++LVGNKSD   ++VV T+ A+ FA  + I+  ETSAK+  NVE+ F  +   +   K+   +    PK  +++    PGQ+     G  CC
Sbjct:    4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI---KKRMANAPVAPKAGVKL---TPGQQVPSNGGSKCC 201

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BLAST of Rab vs. SwissProt
Match: gi|466172|sp|Q05737.1|YPTM2_MAIZE (RecName: Full=GTP-binding protein YPTM2)

HSP 1 Score: 226.868 bits (577), Expect = 1.887e-74
Identity = 111/202 (54.95%), Postives = 149/202 (73.76%), Query Frame = 0

Query:   17 DYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNC-DVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            +YD+LFKLL+IGDSGVGKS LL+RFAD+++  +YI+TIGVDFKIRT+E  G+ +KLQIWDTAGQERFRTITS+YYRG HG+I+VYDVT  +SF NVK+WL+EID+   D VN++LVGNKSD    KVV TE A+ FA++M I   ETSAK+  NV++ F ++   +     +Q    N    ++++     GQ  ++K+ CC
Sbjct:    4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPATVQI----RGQPVNQKTSCC 201

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BLAST of Rab vs. SwissProt
Match: gi|464524|sp|Q05974.1|RAB1A_LYMST (RecName: Full=Ras-related protein Rab-1A)

HSP 1 Score: 226.483 bits (576), Expect = 2.082e-74
Identity = 113/202 (55.94%), Postives = 149/202 (73.76%), Query Frame = 0

Query:   17 DYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNC-DVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            DYD+LFKLL+IGDSGVGKS LL+RFAD+T++ +YI+TIGVDFKIRTIE+ G+ +KLQIWDTAGQERFRTITS+YYRG HG+IVVYDVT  +SF NVK+WL EID+   + VN++LVGNKSD   +KVV    A+ +A+Q+ I   ETSAK+  NVE+ F ++   + K++       +  K S+++    P    + K GCC
Sbjct:    7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEI-KNRMGPITAASDSKPSVKINSSTP--VSANKGGCC 205

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BLAST of Rab vs. SwissProt
Match: gi|466171|sp|P33723.1|YPT1_NEUCR (RecName: Full=GTP-binding protein ypt1)

HSP 1 Score: 226.483 bits (576), Expect = 2.452e-74
Identity = 118/204 (57.84%), Postives = 147/204 (72.06%), Query Frame = 0

Query:   17 DYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNC-DVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKS--GCC 217
            +YD+LFKLL+IGDSGVGKS LL+RFAD+T++ +YI+TIGVDFKIRTIE+ G+ VKLQIWDTAGQERFRTITS+YYRG HG+ VVYDVT  DSF NVK+WL EID+   + VN++LVGNKSD  D+KVV    A+ FA+ + I   ETSAK+  NVE+ F ++   + K +       N  K S+ V    PG   S  S  GCC
Sbjct:    4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI-KERMGSSIATNNTKASVNV---SPGHGVSNNSSGGCC 203

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BLAST of Rab vs. SwissProt
Match: gi|75204021|sp|Q9SEH3.1|RAD2C_ARATH (RecName: Full=Ras-related protein RABD2c; Short=AtRABD2c; AltName: Full=Ras-related protein Rab1C; Short=AtRab1C)

HSP 1 Score: 226.098 bits (575), Expect = 3.051e-74
Identity = 113/202 (55.94%), Postives = 150/202 (74.26%), Query Frame = 0

Query:   17 DYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNC-DVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            +YD+LFKLL+IGDSGVGKS LL+RFAD+++  +YI+TIGVDFKIRT+E  G+ +KLQIWDTAGQERFRTITS+YYRG HG+IV YDVT  +SF NVK+WL+EID+   + VN++LVGNK D   +KVV TE A+ FA+++ I   ETSAK+  NVEE F ++T  +     +Q    ++P       V+  GQ  +++SGCC
Sbjct:    4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKPPT-----VQIRGQPVNQQSGCC 200

[Close]

BLAST of Rab vs. SwissProt
Match: gi|75172011|sp|Q9FPJ4.1|RAD2B_ARATH (RecName: Full=Ras-related protein RABD2b; Short=AtRABD2b; AltName: Full=Ras-related protein Rab1A; Short=AtRab1A)

HSP 1 Score: 225.713 bits (574), Expect = 4.880e-74
Identity = 113/202 (55.94%), Postives = 150/202 (74.26%), Query Frame = 0

Query:   17 DYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNC-DVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            +YD+LFKLL+IGDSGVGKS LL+RFAD+++  +YI+TIGVDFKIRT+E  G+ +KLQIWDTAGQERFRTITS+YYRG HG+IV YDVT  +SF NVK+WL+EID+   + VN++LVGNK+D   +KVV TE A+ FA+++ I   ETSAK+  NVEE F ++T  +     +Q     +P       V+  GQ  +++SGCC
Sbjct:    4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAKPPT-----VQIRGQPVNQQSGCC 200

[Close]

BLAST of Rab vs. SwissProt
Match: gi|466170|sp|P16976.2|YPTM1_MAIZE (RecName: Full=GTP-binding protein YPTM1)

HSP 1 Score: 225.328 bits (573), Expect = 7.634e-74
Identity = 111/206 (53.88%), Postives = 148/206 (71.84%), Query Frame = 0

Query:   15 SKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNC-DVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLN-QPKESIRVGVRRPGQRPSKKSGCCG 218
            S ++D+LFKLL+IGDS VGKS  L+RFAD+++  +YI+TIGVDFKIRT+EV G+ VKLQIWDTAGQERFRTITS+YYRG HG+I+VYD+T  +SF NVK+WL EID+   D V ++LVGNK D  + + V T  A+ +A ++ I   ETSAK++INVEE F +++  + KSK   Q  L  +P   +++  R   Q   K S CC 
Sbjct:    2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALERKPSNVVQMKGRPIQQEQQKSSRCCS 207

[Close]

BLAST of Rab vs. SwissProt
Match: gi|166208510|sp|P34139.2|RAB1A_DICDI (RecName: Full=Ras-related protein Rab-1A)

HSP 1 Score: 224.172 bits (570), Expect = 1.658e-73
Identity = 113/204 (55.39%), Postives = 148/204 (72.55%), Query Frame = 0

Query:   17 DYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQ-NCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRP--SKKSGCC 217
            DY +LFKLL+IGDSGVGKS LL+RFAD+T+S ++I+TIGVDFKIRTIE+ G+ +KLQIWDTAGQERFRTITS+YYRG HG+IVVYDVT   +F NV++WL EID+  C+ VN++LVGNKSD   +KVV    A+ FA+ + I   ETSAK + NVE+ F     + + ++   +   +QP +++      PG     S KSGCC
Sbjct:    4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAF-----MTMATEIKNRLTASQPTQTVDKNKVVPGSSAPISPKSGCC 202

[Close]

BLAST of Rab vs. nr
Match: gi|350641178|gb|AEQ34979.1| (Rab, partial [Tigriopus japonicus])

HSP 1 Score: 349.362 bits (895), Expect = 7.783e-121
Identity = 168/174 (96.55%), Postives = 174/174 (100.00%), Query Frame = 0

Query:   16 KDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQ 189
            KDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNK+DDPDRKVVLTEDARRF+NQMNIQLFETSAK+N+NVEEMFR+ITELVLKSKR+QQ
Sbjct:    1 KDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNKNDDPDRKVVLTEDARRFSNQMNIQLFETSAKENLNVEEMFRAITELVLKSKRSQQ 174

[Close]

BLAST of Rab vs. nr
Match: gi|1325303697|ref|XP_023333427.1| (ras-related protein Rab-35-like [Eurytemora affinis])

HSP 1 Score: 347.051 bits (889), Expect = 4.048e-119
Identity = 168/203 (82.76%), Postives = 189/203 (93.10%), Query Frame = 0

Query:   14 ASKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKE-SIRVGVRRPGQRPSKKSG 215
            A+KDYDHLFKLLIIGDSGVGKSSLLVRFADN FSGNYITTIGVDFKIRTIEV+GERVKLQIWDTAGQERFRTITSTYYRGTHGVI+VYDVT+G+SFANVKRWLHEIDQNCDVVNRILVGNK+DDPDRKVVLTEDARRFA+QM I+LFETSAKDNINVEEMFR++TELVL+SK++Q+ +L+   E  +++   RP  + +KKSG
Sbjct:   15 AAKDYDHLFKLLIIGDSGVGKSSLLVRFADNCFSGNYITTIGVDFKIRTIEVQGERVKLQIWDTAGQERFRTITSTYYRGTHGVIIVYDVTAGESFANVKRWLHEIDQNCDVVNRILVGNKNDDPDRKVVLTEDARRFADQMGIRLFETSAKDNINVEEMFRAVTELVLRSKKDQKRELDSSVEGGVKLHKGRPQGKSNKKSG 217

[Close]

BLAST of Rab vs. nr
Match: gi|321470661|gb|EFX81636.1| (hypothetical protein DAPPUDRAFT_195992 [Daphnia pulex])

HSP 1 Score: 337.421 bits (864), Expect = 1.137e-115
Identity = 162/203 (79.80%), Postives = 183/203 (90.15%), Query Frame = 0

Query:   15 SKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            ++DYDHLFKLLIIGDSGVGKSSLL+RFADNTFSGNYITTIGVDFKIRTI + GERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV+SG+SFANVKRWLHEI+QNCDVVNRILVGNK D PDRKVVLTEDA+RFA+QM IQLFETSAKDN NVEEMF +IT+ VL +K+ Q++Q +   ++I VG    G++P+KKS CC
Sbjct:    2 ARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGNYITTIGVDFKIRTILLNGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVSSGESFANVKRWLHEIEQNCDVVNRILVGNKDDMPDRKVVLTEDAQRFASQMGIQLFETSAKDNKNVEEMFNAITQQVLLTKKEQKEQASNANDTITVG---KGRKPTKKSKCC 201

[Close]

BLAST of Rab vs. nr
Match: gi|1009582168|ref|XP_015922356.1| (ras-related protein Rab-35-like [Parasteatoda tepidariorum])

HSP 1 Score: 336.65 bits (862), Expect = 2.096e-115
Identity = 160/203 (78.82%), Postives = 186/203 (91.63%), Query Frame = 0

Query:   15 SKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            +++YDHLFKLLIIGDSGVGKSSLL+RFADNTF+GNYITTIGVDFKIRT+EV GERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVT+G+SF NVKRWLHEIDQNC+VVNRILVGNK+DDPDRK+VLTEDA+RFA+QM IQLFETSAK+NINVEEMF SIT +VLKSK++Q+++  Q  E+++  +++  QR  KK  CC
Sbjct:    2 AREYDHLFKLLIIGDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTVEVDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFGNVKRWLHEIDQNCEVVNRILVGNKNDDPDRKIVLTEDAQRFADQMGIQLFETSAKENINVEEMFNSITRMVLKSKKDQKERQQQSHETVK--LQKASQRGKKK--CC 200

[Close]

BLAST of Rab vs. nr
Match: gi|1022775508|gb|KZS19367.1| (Ras-related protein Rab-35 [Daphnia magna])

HSP 1 Score: 336.265 bits (861), Expect = 2.674e-115
Identity = 162/203 (79.80%), Postives = 183/203 (90.15%), Query Frame = 0

Query:   15 SKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            ++DYDHLFKLLIIGDSGVGKSSLL+RFADNTFSGNYITTIGVDFKIRTI + GERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV+SG+SFANVKRWLHEI+QNCDVVNRILVGNK D PDRKVVLTEDA+RFA+QM IQLFETSAKDN NVEEMF +IT+ VL +K+ Q++Q +   ++I VG    G++P+KKS CC
Sbjct:    2 ARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGNYITTIGVDFKIRTILLNGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVSSGESFANVKRWLHEIEQNCDVVNRILVGNKDDMPDRKVVLTEDAQRFASQMGIQLFETSAKDNKNVEEMFNAITQQVLLTKKEQKEQASNLNDTITVG---KGRKPTKKSKCC 201

[Close]

BLAST of Rab vs. nr
Match: gi|675378016|gb|KFM70918.1| (Ras-related protein Rab-35, partial [Stegodyphus mimosarum])

HSP 1 Score: 335.88 bits (860), Expect = 3.839e-115
Identity = 161/203 (79.31%), Postives = 185/203 (91.13%), Query Frame = 0

Query:   15 SKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            ++DYDHLFKLLIIGDSGVGKSSLL+RFADNTF+GNYITTIGVDFKIRT+EV GERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVT+G+SF NVKRWLHEIDQNC+VVNRILVGNK+DDPDRK+VLTEDA+RFA+QM IQLFETSAK+NINVEEMF +IT +VLKSK++Q+++  Q  E+  V +++  QR  KK  CC
Sbjct:    2 ARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTVEVDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFGNVKRWLHEIDQNCEVVNRILVGNKNDDPDRKIVLTEDAQRFADQMGIQLFETSAKENINVEEMFNAITRMVLKSKKDQKERQQQSHENT-VKLQKASQRGKKK--CC 201

[Close]

BLAST of Rab vs. nr
Match: gi|926615050|ref|XP_013772589.1| (ras-related protein Rab-35-like isoform X1 [Limulus polyphemus] >gi|1238841358|ref|XP_022239406.1| ras-related protein Rab-35-like isoform X2 [Limulus polyphemus])

HSP 1 Score: 333.954 bits (855), Expect = 2.170e-114
Identity = 162/203 (79.80%), Postives = 185/203 (91.13%), Query Frame = 0

Query:   15 SKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            S++YDHLFKLLIIGDSGVGKSSLL+RFADNTFSGNYITTIGVDFKIRTIEV GE VKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVT+G+SFANVKRWLHEI+QNCDVVNRILVGNK+DDPDRKVVLTED++RFA+QM IQLFETSAK+NINVE+MF +IT++VL +K+ Q+++  Q +ES  V ++R  QR  KK  CC
Sbjct:    2 SREYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGNYITTIGVDFKIRTIEVEGELVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCDVVNRILVGNKNDDPDRKVVLTEDSQRFADQMGIQLFETSAKENINVEKMFNAITKMVLNTKKEQKERQQQNREST-VKLQRGSQRGKKK--CC 201

[Close]

BLAST of Rab vs. nr
Match: gi|240974176|ref|XP_002401800.1| (zinc finger protein, putative [Ixodes scapularis] >gi|215491064|gb|EEC00705.1| zinc finger protein, putative [Ixodes scapularis])

HSP 1 Score: 333.569 bits (854), Expect = 3.616e-114
Identity = 160/203 (78.82%), Postives = 184/203 (90.64%), Query Frame = 0

Query:   15 SKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            S++YDHLFKLLIIGDSGVGKSSLL+RFADNTF+GNYITTIGVDFKIRT+EV GERVKLQIWDTAGQERFRTITSTYYRGTHGV+VVYDVT+G+SFANVKRWLHEI+QNCDVVNRILVGNK+DDP RKVVLTEDA+RFA+QM IQLFETSAK+NINVEEMF +IT +VLKSK+ Q+++   P + +R+   +PG +  KK  CC
Sbjct:    2 SREYDHLFKLLIIGDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTLEVDGERVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFANVKRWLHEIEQNCDVVNRILVGNKNDDPSRKVVLTEDAQRFADQMGIQLFETSAKENINVEEMFNAITRMVLKSKKEQKERQQVPDDKLRL---KPGGQKKKK--CC 199

[Close]

BLAST of Rab vs. nr
Match: gi|926624953|ref|XP_013777954.1| (ras-related protein Rab-35-like isoform X1 [Limulus polyphemus])

HSP 1 Score: 330.872 bits (847), Expect = 3.750e-113
Identity = 161/203 (79.31%), Postives = 182/203 (89.66%), Query Frame = 0

Query:   15 SKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQPKESIRVGVRRPGQRPSKKSGCC 217
            +++YDHLFKLLIIGDSGVGKSSLL+RFADNTF+GNYITTIGVDFKIRTIEV GERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVT+G+SFANVKRWLHEIDQNCDVVNRILVGNK+DDPD KVVL EDA+RF + M I LFETSAKDNINVEEMF +IT++VLK+K+ Q+++  Q KE+  V ++R  QR  KK  CC
Sbjct:    2 AREYDHLFKLLIIGDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTIEVDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIDQNCDVVNRILVGNKNDDPDNKVVLKEDAQRFTDHMGIMLFETSAKDNINVEEMFNAITKMVLKTKKEQKERQQQNKETT-VKLQRGTQRGKKK--CC 201

[Close]

BLAST of Rab vs. nr
Match: gi|908462340|ref|XP_013085837.1| (PREDICTED: ras-related protein Rab-35-like isoform X2 [Biomphalaria glabrata])

HSP 1 Score: 329.717 bits (844), Expect = 1.112e-112
Identity = 159/204 (77.94%), Postives = 177/204 (86.76%), Query Frame = 0

Query:   15 SKDYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGNYITTIGVDFKIRTIEVRGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIDQNCDVVNRILVGNKSDDPDRKVVLTEDARRFANQMNIQLFETSAKDNINVEEMFRSITELVLKSKRNQQDQLNQP-KESIRVGVRRPGQRPSKKSGCC 217
            +++YDHLFKLLIIGDSGVGKSSLL+RFADN FSG YITTIGVDFKIRTIEV GERVKLQIWDTAGQERFRTITSTYYRGTHGV+VVYDV SG+SFANV+RWLHEIDQNCDVVNRILVGNK DDPDRKVVLT+DA+RFA +M IQLFETSAK+N NVEEMF +IT+LVL+SKR  Q++  +P   +IRVG   P      K  CC
Sbjct:    2 AREYDHLFKLLIIGDSGVGKSSLLLRFADNVFSGTYITTIGVDFKIRTIEVNGERVKLQIWDTAGQERFRTITSTYYRGTHGVLVVYDVCSGESFANVQRWLHEIDQNCDVVNRILVGNKDDDPDRKVVLTQDAQRFAERMQIQLFETSAKENKNVEEMFMAITKLVLESKRKMQEEAKKPAANTIRVG---PSSAKQAKKKCC 202

The following BLAST results are available for this feature:

BLAST of Rab vs. L. salmonis genes
BLAST of Rab vs. SwissProt
BLAST of Rab vs. nr

BLAST of Rab vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000005111	2.638e-100	61.26	supercontig:LSalAtl2s:LSalAtl2s26:918032:918799:-1...	[more]
EMLSAG00000001458	5.038e-74	55.12	supercontig:LSalAtl2s:LSalAtl2s1248:131241:136261:...	[more]
EMLSAG00000009511	1.715e-59	47.85	supercontig:LSalAtl2s:LSalAtl2s612:149458:156023:-...	[more]
EMLSAG00000003190	1.805e-57	42.93	supercontig:LSalAtl2s:LSalAtl2s1770:8657:11199:-1 ...	[more]
EMLSAG00000003241	2.615e-53	50.00	supercontig:LSalAtl2s:LSalAtl2s178:231454:232215:-...	[more]
EMLSAG00000012618	2.663e-45	39.32	supercontig:LSalAtl2s:LSalAtl2s94:53587:63698:1 ge...	[more]
EMLSAG00000002040	7.986e-42	35.68	supercontig:LSalAtl2s:LSalAtl2s136:216604:221557:1...	[more]
EMLSAG00000005149	9.586e-41	42.25	supercontig:LSalAtl2s:LSalAtl2s272:1903:7665:1 gen...	[more]
EMLSAG00000011153	9.519e-39	38.62	supercontig:LSalAtl2s:LSalAtl2s759:225438:227635:-...	[more]
EMLSAG00000000624	9.632e-39	40.10	supercontig:LSalAtl2s:LSalAtl2s109:73593:97815:1 g...	[more]

Pages

BLAST of Rab vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|3024525\|sp\|Q15286.1\|RAB35_HUMAN	5.922e-107	73.89	RecName: Full=Ras-related protein Rab-35; AltName:...	[more]
gi\|141302\|sp\|P11620.2\|YPT1_SCHPO	6.229e-77	58.13	RecName: Full=GTP-binding protein ypt1	[more]
gi\|2500076\|sp\|Q01890.1\|YPT1_PHYIN	7.748e-77	56.37	RecName: Full=Ras-like GTP-binding protein YPT1	[more]
gi\|466172\|sp\|Q05737.1\|YPTM2_MAIZE	1.887e-74	54.95	RecName: Full=GTP-binding protein YPTM2	[more]
gi\|464524\|sp\|Q05974.1\|RAB1A_LYMST	2.082e-74	55.94	RecName: Full=Ras-related protein Rab-1A	[more]
gi\|466171\|sp\|P33723.1\|YPT1_NEUCR	2.452e-74	57.84	RecName: Full=GTP-binding protein ypt1	[more]
gi\|75204021\|sp\|Q9SEH3.1\|RAD2C_ARATH	3.051e-74	55.94	RecName: Full=Ras-related protein RABD2c; Short=At...	[more]
gi\|75172011\|sp\|Q9FPJ4.1\|RAD2B_ARATH	4.880e-74	55.94	RecName: Full=Ras-related protein RABD2b; Short=At...	[more]
gi\|466170\|sp\|P16976.2\|YPTM1_MAIZE	7.634e-74	53.88	RecName: Full=GTP-binding protein YPTM1	[more]
gi\|166208510\|sp\|P34139.2\|RAB1A_DICDI	1.658e-73	55.39	RecName: Full=Ras-related protein Rab-1A	[more]

Pages

BLAST of Rab vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|350641178\|gb\|AEQ34979.1\|	7.783e-121	96.55	Rab, partial [Tigriopus japonicus]	[more]
gi\|1325303697\|ref\|XP_023333427.1\|	4.048e-119	82.76	ras-related protein Rab-35-like [Eurytemora affini...	[more]
gi\|321470661\|gb\|EFX81636.1\|	1.137e-115	79.80	hypothetical protein DAPPUDRAFT_195992 [Daphnia pu...	[more]
gi\|1009582168\|ref\|XP_015922356.1\|	2.096e-115	78.82	ras-related protein Rab-35-like [Parasteatoda tepi...	[more]
gi\|1022775508\|gb\|KZS19367.1\|	2.674e-115	79.80	Ras-related protein Rab-35 [Daphnia magna]	[more]
gi\|675378016\|gb\|KFM70918.1\|	3.839e-115	79.31	Ras-related protein Rab-35, partial [Stegodyphus m...	[more]
gi\|926615050\|ref\|XP_013772589.1\|	2.170e-114	79.80	ras-related protein Rab-35-like isoform X1 [Limulu...	[more]
gi\|240974176\|ref\|XP_002401800.1\|	3.616e-114	78.82	zinc finger protein, putative [Ixodes scapularis] ...	[more]
gi\|926624953\|ref\|XP_013777954.1\|	3.750e-113	79.31	ras-related protein Rab-35-like isoform X1 [Limulu...	[more]
gi\|908462340\|ref\|XP_013085837.1\|	1.112e-112	77.94	PREDICTED: ras-related protein Rab-35-like isoform...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold55_size446313	supercontig	scaffold55_size446313:438408..440426 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold55_size446313-snap-gene-3.25-mRNA-1	maker-scaffold55_size446313-snap-gene-3.25-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold55_size446313:438408..440426+

gene from alignment at scaffold55_size446313:438408..440426+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold55_size446313-snap-gene-3.25 ID=maker-scaffold55_size446313-snap-gene-3.25|Name=Rab|organism=Tigriopus kingsejongensis|type=gene|length=2019bp|location=Sequence derived from alignment at scaffold55_size446313:438408..440426+ (Tigriopus kingsejongensis)
TCCGACCCGCCCCCTCCCATGGGACGGCCTTCCGGGTGATCCAGCGACCA
CTCCGCCCGTGGCTCACCCGCCACACTGAGCCCTCCGGCCCGCACCATGG
CACTGGGTGGGCACGCCAGTAAAGACTATGACCACCTCTTCAAGTTGCTC
ATCATCGGCGACTCGGGCGTGGGCAAGAGCTCGCTCCTGGTTCGATTCGC
CGACAACACCTTCTCCGGGAATTACATCACCACCATCGGCGTGGACTTCA
AAATCCGGACCATCGAAGTGCGAGGCGAGAGGTGAGGCTCGGAGGCTCGG
ATCGGCCCACGTCATGAGTCGAGGCCATATTCGGACTGGGAACCCGTTTG
GGATGGGGGTCTAGCGATCCTGAGCCCCTAGGTGGGCGCCCCCATCCGAC
ACTGGAGTGTACCCATCGCTCGGAGAGCTGGGTCCGCCCTACCGCGAAAT
CGGGGGGTCGGGTGGGAGAATGGCTCCAGCCGGACATGTTCGAATGGCCC
GACCATTCCTCTCGCCCGAGAAACCCACCCCTTGATATATGCGGGTGAGG
CTCATCGGATGCCTGGTGGGCCTAGCCATAGATGGCAAGTGGTCTGGCTT
GAAGTTCAGCTCGCGTGTCTAATCCAGACTGTTTGATAGCCTTCATGAAT
CGGGTCCATATCGTGCCCGCTCAGTCGGGAGGGTGGCAGGCCAGGCGAGC
ACCCCGTTGAGTGTGACAACGTCTGAAAGGGCTGTCAGGGACTGCCAGAG
CCAGGCGGACGTTGTCACTAGGGCTAGCCAGAGGGGTAGACATCTCTGCT
AGGGTCACTAGGGCTAGCCAGAGGGGTAGACATCTCTGCTAGGGTCACTA
GGGCTAGCCATCTCTTCTAGGGTCACTAGGGCTAGCCAGAAGGGGTAGAC
ATCTCTGCTAGGGTCACTAGGGCTAGCCAGAGGGCTAGCCATCTCTTCTA
GGGTCACTAGGGCTAGCCAGAGGGGTAGACATCTCTGCTAGGGTCACTAG
GGCTAGCCAGAGGGGTAGACATCTCTGCTAGGGTCGCTAGGGCTAGCTTG
GCCCACTGGCAGCATCACCATCCCCATGTCGATATTATTGACTGAGTTTG
TTTTATTGCCTGGCGCAGGGTGAAGCTGCAGATCTGGGACACTGCCGGAC
AGGAGCGATTCCGAACCATCACTTCGACCTACTATCGAGGCACGCATGGT
GTGATTGTAGTCTACGATGTCACTTCGGGCGATTCCTTCGCCAATGTGAA
ACGGTAAGATATTCAAACGCCACCGCAATCCTCGGTCCAACGATTTCCCG
CAGGACTATGCCATCACGTGGGCGGGTGCCAGTATTGGCGATACCAGACC
ACCATGGCCGTGGATGAGAACTCAAAGAGGGCTTGTTTTTTCACAGGTGG
CTGCACGAGATTGACCAGAATTGCGATGTGGTCAACCGAATCCTGGTGGG
GAACAAGAGCGATGATCCCGATCGGAAAGTGGTTCTAACGGAGGATGCTC
GGCGGTTCGCCAATCAGATGAACATTCAGCTCTTCGAAACCTCGGCCAAG
GACAACATCAACGTCGAGGAGATGTTCCGGTCCATCACCGAACTGGTCCT
CAAGTCCAAGCGCAACCAGCAAGATCAGCTCAATCAACCTAAAGAGAGCA
TTCGAGTCGGCGTCCGGAGACCGGGTCAGAGGCCGAGCAAGAAAAGCGGC
TGCTGTGGCAAGTGAAACCTGTACAACTCCGATCCAGGCCGGCAATTTCC
TACCCTCCTTACAAATCAATCATGACAAAGATGATCCCATGGACTGACCA
CTGCCCCGAACTTGAGGAACTGACTCGCTCTCAAGGAAATAATCAACGCG
CGGAGCGAGAGAAAGAAGGAGGCCGTAACGGGTTGTGCGAAAAGACGCTT
GTATCTGATTCCGAAGAGTGCATGAAGAACCTCCCGACGCCCATAAGTGT
TGTCTGGCACGTGCTCCTTCCCCAGCGATGCTCTTGAGCATTCCATTTCC
ACCCCCTCCCCCCCCCCCC

Synonyms

The feature 'Rab' has the following synonyms


Synonym
Tk00234

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