conserved hypothetical protein, maker-scaffold259_size234575-snap-gene-1.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000006480 (supercontig:LSalAtl2s:LSalAtl2s354:213665:368876:-1 gene:EMLSAG00000006480 transcript:EMLSAT00000006480 description:"maker-LSalAtl2s354-snap-gene-2.25") HSP 1 Score: 93.9745 bits (232), Expect = 5.748e-22 Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 0 Query: 175 IFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMPS 247 IF IY+ E K + RGFIL ++YLR+ WNWLDFIVI Y+T I++GNLA LRTFRVLRALKTV+I+P Sbjct: 151 IFTAIYTFESATKVMGRGFILCPFSYLRDAWNWLDFIVITLAYITMGIDLGNLAVLRTFRVLRALKTVAIIPG 223
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000009714 (supercontig:LSalAtl2s:LSalAtl2s627:140867:158129:1 gene:EMLSAG00000009714 transcript:EMLSAT00000009714 description:"maker-LSalAtl2s627-snap-gene-1.23") HSP 1 Score: 92.4337 bits (228), Expect = 1.798e-21 Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 0 Query: 170 SPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMPS 247 S IF IY+ E +K +ARGFIL+N+TYLR+PWNWLDF VI Y+T I++G+ + LRTFRV RALK+V+ +P Sbjct: 193 SASEIIFTSIYTYESAVKLLARGFILHNFTYLRDPWNWLDFAVIGMSYITIAIDLGSFSSLRTFRVFRALKSVAXVPG 270
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000000855 (supercontig:LSalAtl2s:LSalAtl2s11442:157:726:-1 gene:EMLSAG00000000855 transcript:EMLSAT00000000855 description:"maker-LSalAtl2s11442-snap-gene-0.2") HSP 1 Score: 70.8626 bits (172), Expect = 2.124e-16 Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 0 Query: 176 FLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMG---NLAGLRTFRVLRALKTVSIMP 246 FLGI+++E ++K +A+GF+L+ +YLRN WN +DF+V+++G +T +E +L LR+FR LR LK VS +P Sbjct: 7 FLGIFTVETSLKILAQGFVLHPGSYLRNMWNIMDFVVVVTGCMTILVEKSVPFDLRMLRSFRCLRPLKMVSKVP 80
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000008334 (supercontig:LSalAtl2s:LSalAtl2s508:27226:174463:1 gene:EMLSAG00000008334 transcript:EMLSAT00000008334 description:"maker-LSalAtl2s508-snap-gene-1.26") HSP 1 Score: 71.633 bits (174), Expect = 1.710e-14 Identity = 45/118 (38.14%), Postives = 63/118 (53.39%), Query Frame = 0 Query: 175 IFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYL-----TSFIEMG------------------------------NLAGLRTFRVLRALKTVSIMP----SGGKCGS 253 +F+GI+++EM K VA GFIL++ +YLRNPWN +DFIV++SG + SFI + +L+ LRTFRVLR LK VS +P +GG G+ Sbjct: 119 VFMGIFTMEMCFKIVADGFILHHGSYLRNPWNIMDFIVVISGSIYVHPNKSFIHISHYNDVIYYFYSTSFLPYLIPKSDKKENTGPDLSTLRTFRVLRPLKLVSGVPNRIITGGDSGN 236 HSP 2 Score: 50.8322 bits (120), Expect = 1.474e-7 Identity = 42/142 (29.58%), Postives = 67/142 (47.18%), Query Frame = 0 Query: 113 SLWPLGTFNPQLPSKLRYLVSRSHFRCHSASSVRQSGSAFVSPGIHTRASVHHFSSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEM-------GNLAGLRTFRVLRALKTVSIMPS 247 S + L + NP + + +L ++ F C + S A S S+ + Y F I++LE ++K + GF+L+ YLR+ WN+LD I ++S L SF L L+ RVLR LKT++ +P Sbjct: 661 SFFILSSSNP-IRVSIHWLXTKKVFDCFIMCVIVLSSIALASEDPVDENSIRN-KLLGYADYGFTTIFTLECSLKMIDLGFVLHPGAYLRDFWNFLD-ITVVSCALISFYHTLAGTPTGQKLKSLKLLRVLRPLKTINRVPK 799
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000009889 (supercontig:LSalAtl2s:LSalAtl2s643:800:51309:-1 gene:EMLSAG00000009889 transcript:EMLSAT00000009889 description:"maker-LSalAtl2s643-snap-gene-0.8") HSP 1 Score: 59.6918 bits (143), Expect = 1.691e-10 Identity = 38/105 (36.19%), Postives = 53/105 (50.48%), Query Frame = 0 Query: 170 SPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMG---------------------------NLAGLRTFRVLRALKTVSIMPS 247 PY FLGI+++E +K +A GF+L+ +YLRN WN +DFIV+++G +T E +L LR RVLR LK VS +PS Sbjct: 51 EPY---FLGIFTVEAALKILALGFVLHRGSYLRNAWNIMDFIVVVTGMVTFGAEASIPFDLTIVRSFRESEASSSSIPSEEGVDLRTLRAIRVLRPLKLVSGVPS 152 HSP 2 Score: 55.8398 bits (133), Expect = 3.187e-9 Identity = 27/85 (31.76%), Postives = 47/85 (55.29%), Query Frame = 0 Query: 172 YRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEM---------GNLAGLRTFRVLRALKTVSIMPS 247 + Y+F GI+++EM +K + G I + +YLR+ WN +D +V++ ++ +M + LR RVLR LKT+ +P Sbjct: 655 FDYVFTGIFAVEMILKVIDLGLIAHPGSYLRDVWNLMDALVVICASISFIFDMTGSSKGQNLSTIKSLRVLRVLRPLKTIKRVPK 739
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000004952 (supercontig:LSalAtl2s:LSalAtl2s260:1045447:1062229:1 gene:EMLSAG00000004952 transcript:EMLSAT00000004952 description:"maker-LSalAtl2s260-snap-gene-10.24") HSP 1 Score: 59.6918 bits (143), Expect = 1.736e-10 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 0 Query: 175 IFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSF-----IEMGNLAGLRTFRVLRALKTVSIMPS 247 IF+ I++ E IK VA G + YLRN WN++DF +++ G++ IE ++ LR FRVLR L+ VS +PS Sbjct: 109 IFMVIFTGECVIKIVAYGLYQHEEAYLRNTWNFIDFSIVMIGFMDILLSSLSIEGFDVKALRAFRVLRPLRLVSGVPS 186
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000010843 (supercontig:LSalAtl2s:LSalAtl2s721:13130:108134:1 gene:EMLSAG00000010843 transcript:EMLSAT00000010843 description:"maker-LSalAtl2s721-augustus-gene-1.27") HSP 1 Score: 59.6918 bits (143), Expect = 1.877e-10 Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 0 Query: 173 RYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSF-----IEMGNLAGLRTFRVLRALKTVSIMP 246 YIFL I++ E +K +A GF + YLR+ WN LDF +++ G +++ IE ++ LR FRVLR L+ VS +P Sbjct: 211 EYIFLVIFTTECVMKIIAYGFWQHPTAYLRSAWNMLDFTIVMIGVISTILSSLRIEGFDVKALRAFRVLRPLRLVSGVP 289
BLAST of conserved hypothetical protein vs. SwissProt
Match: gi|1352800280|sp|Q9W0Y8.6|SCN60_DROME (RecName: Full=Sodium channel protein 60E; AltName: Full=Drosophila ion channel 60; AltName: Full=Drosophila sodium channel 1; AltName: Full=Protein smell-impaired 60E; AltName: Full=Sodium channel 2; Short=DmNav2) HSP 1 Score: 128.257 bits (321), Expect = 2.643e-32 Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = 0 Query: 173 RYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 YIFL IYS+EM IK +A+GF+LN YTYLRNPWNWLDF+VI SGY T +E+GNLAGLRTFRVLRALKTVSIMP Sbjct: 153 EYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMP 226 HSP 2 Score: 100.523 bits (249), Expect = 9.617e-23 Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 0 Query: 1 SFCVVSRRFQKHYVQRFNATRSLFLFPPWNKLRTAAIYLCTNQYFDYVVMITILVNCIFLAMTHPIDEAE 70 +FCVVS+RF+K+Y+ RF T+SLFLF PW+ R +Y+ TNQ+FDY VM TIL NCIFLAMT ++EAE Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFLAMTETVEEAE 153
BLAST of conserved hypothetical protein vs. SwissProt
Match: gi|116447|sp|P04774.1|SCN1A_RAT (RecName: Full=Sodium channel protein type 1 subunit alpha; AltName: Full=Sodium channel protein brain I subunit alpha; AltName: Full=Sodium channel protein type I subunit alpha; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.1) HSP 1 Score: 110.538 bits (275), Expect = 2.706e-26 Identity = 59/149 (39.60%), Postives = 88/149 (59.06%), Query Frame = 0 Query: 98 LMNAGLTTFEVSFSLSLWPLGTFNPQLPSKLRYLVSRSHFRCHSASSVRQSGSAFVSPGIHTRASVHHFSSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 ++N G F S + +L+ L FNP ++ LV HS S+ + + T ++ ++ Y F GIY+ E IK +ARGF L ++T+LR+PWNWLDF VI Y+T F+++GN++ LRTFRVLRALKT+S++P Sbjct: 92 VLNKGKAIFRFSATSALYILTPFNPLRKIAIKILV-------HSLFSMLIMCTILTNCVFMTMSNPPDWTK--NVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIP 231 HSP 2 Score: 54.6842 bits (130), Expect = 2.424e-7 Identity = 22/52 (42.31%), Postives = 35/52 (67.31%), Query Frame = 0 Query: 16 RFNATRSLFLFPPWNKLRTAAIYLCTNQYFDYVVMITILVNCIFLAMTHPID 67 RF+AT +L++ P+N LR AI + + F ++M TIL NC+F+ M++P D Sbjct: 101 RFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMSNPPD 152
BLAST of conserved hypothetical protein vs. SwissProt
Match: gi|12644229|sp|P35498.2|SCN1A_HUMAN (RecName: Full=Sodium channel protein type 1 subunit alpha; AltName: Full=Sodium channel protein brain I subunit alpha; AltName: Full=Sodium channel protein type I subunit alpha; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.1) HSP 1 Score: 110.538 bits (275), Expect = 2.706e-26 Identity = 59/149 (39.60%), Postives = 88/149 (59.06%), Query Frame = 0 Query: 98 LMNAGLTTFEVSFSLSLWPLGTFNPQLPSKLRYLVSRSHFRCHSASSVRQSGSAFVSPGIHTRASVHHFSSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 ++N G F S + +L+ L FNP ++ LV HS S+ + + T ++ ++ Y F GIY+ E IK +ARGF L ++T+LR+PWNWLDF VI Y+T F+++GN++ LRTFRVLRALKT+S++P Sbjct: 92 VLNKGKAIFRFSATSALYILTPFNPLRKIAIKILV-------HSLFSMLIMCTILTNCVFMTMSNPPDWTK--NVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIP 231 HSP 2 Score: 54.6842 bits (130), Expect = 2.424e-7 Identity = 22/52 (42.31%), Postives = 35/52 (67.31%), Query Frame = 0 Query: 16 RFNATRSLFLFPPWNKLRTAAIYLCTNQYFDYVVMITILVNCIFLAMTHPID 67 RF+AT +L++ P+N LR AI + + F ++M TIL NC+F+ M++P D Sbjct: 101 RFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMSNPPD 152
BLAST of conserved hypothetical protein vs. SwissProt
Match: gi|1075592866|sp|A2APX8.1|SCN1A_MOUSE (RecName: Full=Sodium channel protein type 1 subunit alpha; AltName: Full=Sodium channel protein brain I subunit alpha; AltName: Full=Sodium channel protein type I subunit alpha; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.1) HSP 1 Score: 110.538 bits (275), Expect = 2.758e-26 Identity = 59/149 (39.60%), Postives = 88/149 (59.06%), Query Frame = 0 Query: 98 LMNAGLTTFEVSFSLSLWPLGTFNPQLPSKLRYLVSRSHFRCHSASSVRQSGSAFVSPGIHTRASVHHFSSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 ++N G F S + +L+ L FNP ++ LV HS S+ + + T ++ ++ Y F GIY+ E IK +ARGF L ++T+LR+PWNWLDF VI Y+T F+++GN++ LRTFRVLRALKT+S++P Sbjct: 92 VLNKGKAIFRFSATSALYILTPFNPLRKIAIKILV-------HSLFSMLIMCTILTNCVFMTMSNPPDWTK--NVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIP 231 HSP 2 Score: 54.6842 bits (130), Expect = 2.447e-7 Identity = 22/52 (42.31%), Postives = 35/52 (67.31%), Query Frame = 0 Query: 16 RFNATRSLFLFPPWNKLRTAAIYLCTNQYFDYVVMITILVNCIFLAMTHPID 67 RF+AT +L++ P+N LR AI + + F ++M TIL NC+F+ M++P D Sbjct: 101 RFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMSNPPD 152
BLAST of conserved hypothetical protein vs. SwissProt
Match: gi|150421666|sp|P35500.3|SCNA_DROME (RecName: Full=Sodium channel protein para; AltName: Full=Protein paralytic; AltName: Full=Sodium channel 1; Short=DmNav1) HSP 1 Score: 108.997 bits (271), Expect = 1.117e-25 Identity = 61/149 (40.94%), Postives = 85/149 (57.05%), Query Frame = 0 Query: 98 LMNAGLTTFEVSFSLSLWPLGTFNPQLPSKLRYLVSRSHFRCHSASSVRQSGSAFVSPGIHTRASVHHFSSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 +++ G F S S ++W L FNP + Y++ F +++ + + P T S IF GIY+ E +K +ARGFIL +TYLR+ WNWLDF+VI Y+T I++GNLA LRTFRVLRALKTV+I+P Sbjct: 117 VVSKGKDIFRFSASKAMWMLDPFNPIRRVAI-YILVHPLFSLFIITTILVNCILMIMPTTPTVESTE---------VIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVP 255 HSP 2 Score: 53.1434 bits (126), Expect = 9.495e-7 Identity = 28/74 (37.84%), Postives = 41/74 (55.41%), Query Frame = 0 Query: 175 IFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVI---LSGYLTSFIEMGNLAGLRTFRVLRALKTVSIM 245 IF I+ LEM IK +A GF + Y N W WLDF+++ L ++ S + G + +T R LRAL+ + M Sbjct: 1341 IFTVIFFLEMLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAM 1410
BLAST of conserved hypothetical protein vs. SwissProt
Match: gi|25014054|sp|Q9NY46.2|SCN3A_HUMAN (RecName: Full=Sodium channel protein type 3 subunit alpha; AltName: Full=Sodium channel protein brain III subunit alpha; AltName: Full=Sodium channel protein type III subunit alpha; AltName: Full=Voltage-gated sodium channel subtype III; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.3) HSP 1 Score: 108.612 bits (270), Expect = 1.492e-25 Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = 0 Query: 98 LMNAGLTTFEVSFSLSLWPLGTFNPQLPSKLRYLVSRSHFRCHSASSVRQSGSAFVSPGIHTRASVHHFSSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 +MN G F S + +L+ L NP ++ LV HS S+ + + T ++ ++ Y F GIY+ E IK +ARGF L ++T+LR+PWNWLDF VI+ Y+T F+ +GN++ LRTFRVLRALKT+S++P Sbjct: 92 VMNKGKAIFRFSATSALYILTPLNPVRKIAIKILV-------HSLFSMLIMCTILTNCVFMTLSNPPDWTK--NVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVSLGNVSALRTFRVLRALKTISVIP 231
BLAST of conserved hypothetical protein vs. SwissProt
Match: gi|116448|sp|P04775.1|SCN2A_RAT (RecName: Full=Sodium channel protein type 2 subunit alpha; AltName: Full=Sodium channel protein brain II subunit alpha; AltName: Full=Sodium channel protein type II subunit alpha; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.2) HSP 1 Score: 108.227 bits (269), Expect = 2.144e-25 Identity = 45/73 (61.64%), Postives = 58/73 (79.45%), Query Frame = 0 Query: 174 YIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 Y F GIY+ E IK +ARGF L ++T+LRNPWNWLDF VI Y+T F+ +GN++ LRTFRVLRALKT+S++P Sbjct: 160 YTFTGIYTFESLIKILARGFCLEDFTFLRNPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIP 232 HSP 2 Score: 55.4546 bits (132), Expect = 1.534e-7 Identity = 21/54 (38.89%), Postives = 37/54 (68.52%), Query Frame = 0 Query: 14 VQRFNATRSLFLFPPWNKLRTAAIYLCTNQYFDYVVMITILVNCIFLAMTHPID 67 + RF+AT +L++ P+N +R AI + + F+ ++M TIL NC+F+ M++P D Sbjct: 100 ISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMSNPPD 153
BLAST of conserved hypothetical protein vs. SwissProt
Match: gi|81886863|sp|O88420.1|SCN8A_RAT (RecName: Full=Sodium channel protein type 8 subunit alpha; AltName: Full=Peripheral nerve protein type 4; Short=PN4; AltName: Full=Sodium channel 6; Short=NaCh6; AltName: Full=Sodium channel protein type VIII subunit alpha; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.6) HSP 1 Score: 108.227 bits (269), Expect = 2.225e-25 Identity = 59/153 (38.56%), Postives = 89/153 (58.17%), Query Frame = 0 Query: 98 LMNAGLTTFEVSFSLSLWPLGTFNPQLPSKLRYLVSRSHFRCHSASSVRQSGSAFVSPGIHTRASVHHFSSFSPY----RYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 ++N G T F S + +L+ L FN ++ L+ HS S+ + I T FS+ + Y F GIY+ E +K +ARGF ++ +T+LR+PWNWLDF VI+ Y+T F+++GN++ LRTFRVLRALKT+S++P Sbjct: 96 VLNRGKTLFRFSATPALYILSPFNLIRRIAIKILI-------HSVFSM------IIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIP 235
BLAST of conserved hypothetical protein vs. SwissProt
Match: gi|34098761|sp|Q9WTU3.1|SCN8A_MOUSE (RecName: Full=Sodium channel protein type 8 subunit alpha; AltName: Full=Sodium channel protein type VIII subunit alpha; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.6) HSP 1 Score: 107.842 bits (268), Expect = 2.268e-25 Identity = 59/153 (38.56%), Postives = 89/153 (58.17%), Query Frame = 0 Query: 98 LMNAGLTTFEVSFSLSLWPLGTFNPQLPSKLRYLVSRSHFRCHSASSVRQSGSAFVSPGIHTRASVHHFSSFSPY----RYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 ++N G T F S + +L+ L FN ++ L+ HS S+ + I T FS+ + Y F GIY+ E +K +ARGF ++ +T+LR+PWNWLDF VI+ Y+T F+++GN++ LRTFRVLRALKT+S++P Sbjct: 96 VLNRGKTLFRFSATPALYILSPFNLIRRIAIKILI-------HSVFSM------IIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIP 235
BLAST of conserved hypothetical protein vs. SwissProt
Match: gi|116449|sp|P08104.1|SCN3A_RAT (RecName: Full=Sodium channel protein type 3 subunit alpha; AltName: Full=Sodium channel protein brain III subunit alpha; AltName: Full=Sodium channel protein type III subunit alpha; AltName: Full=Voltage-gated sodium channel subtype III; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.3) HSP 1 Score: 107.842 bits (268), Expect = 2.638e-25 Identity = 58/149 (38.93%), Postives = 88/149 (59.06%), Query Frame = 0 Query: 98 LMNAGLTTFEVSFSLSLWPLGTFNPQLPSKLRYLVSRSHFRCHSASSVRQSGSAFVSPGIHTRASVHHFSSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 ++N G F S + +L+ L NP ++ LV HS S+ + + T ++ ++ Y F GIY+ E IK +ARGF L ++T+LR+PWNWLDF VI+ Y+T F+++GN++ LRTFRVLRALKT+S++P Sbjct: 92 VLNKGKAIFRFSATSALYILTPLNPVRKIAIKILV-------HSLFSMLIMCTILTNCVFMTLSNPPDWTK--NVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIP 231
BLAST of conserved hypothetical protein vs. nr
Match: gi|1285024530|ref|XP_023024545.1| (sodium channel protein 60E-like, partial [Leptinotarsa decemlineata]) HSP 1 Score: 127.487 bits (319), Expect = 3.386e-33 Identity = 58/75 (77.33%), Postives = 66/75 (88.00%), Query Frame = 0 Query: 173 RYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMPS 247 RYIFL IY+LEM IK +A+GFILN YTYLRNPWNWLDF+VI SGY T +E+GNLAGLRTFRVLRALKT+SI+P Sbjct: 17 RYIFLAIYTLEMIIKTIAKGFILNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTISILPG 91
BLAST of conserved hypothetical protein vs. nr
Match: gi|930669629|gb|KPJ10511.1| (Sodium channel protein 60E [Papilio machaon]) HSP 1 Score: 131.724 bits (330), Expect = 4.167e-31 Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 0 Query: 167 SSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMPSGG 249 + YIFL IY+ EM IKC+A+GFILN YTYLRNPWNWLDF+VI SGY T +E+GNLAGLRTFRVLRALKTVSIMP+ G Sbjct: 88 ETIEEAEYIFLAIYTAEMIIKCIAKGFILNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMPAKG 170 HSP 2 Score: 103.99 bits (258), Expect = 1.491e-21 Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 0 Query: 190 ARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 A+GFILN YTYLRNPWNWLDF+VI SGY T +E+GNLAGLRTFRVLRALKTVSIMP Sbjct: 168 AKGFILNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMP 224 HSP 3 Score: 102.834 bits (255), Expect = 4.809e-21 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 0 Query: 1 SFCVVSRRFQKHYVQRFNATRSLFLFPPWNKLRTAAIYLCTNQYFDYVVMITILVNCIFLAMTHPIDEAE 70 +FCVVS+RF+K+Y+ RF ATRSLF + PW+ +R A +YL TNQYFDY VM TIL+NC+FLAM+ I+EAE Sbjct: 25 TFCVVSKRFRKNYIHRFTATRSLFWWSPWSPVRRACVYLSTNQYFDYFVMATILLNCVFLAMSETIEEAE 94
BLAST of conserved hypothetical protein vs. nr
Match: gi|1247044155|gb|PCG78667.1| (hypothetical protein B5V51_3404 [Heliothis virescens]) HSP 1 Score: 129.413 bits (324), Expect = 9.567e-31 Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0 Query: 167 SSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 + YIFL IY+ EM IKC+A+GFILN YTYLRNPWNWLDF+VI SGY T +E+GNLAGLRTFRVLRALKTVSIMP Sbjct: 70 ETIEEAEYIFLAIYTAEMIIKCIAKGFILNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMP 149 HSP 2 Score: 103.99 bits (258), Expect = 9.582e-22 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 0 Query: 1 SFCVVSRRFQKHYVQRFNATRSLFLFPPWNKLRTAAIYLCTNQYFDYVVMITILVNCIFLAMTHPIDEAE 70 +FCVVS+RF+K+Y+ RF ATRSLF + PW+ +R A +YL TNQYFDY VM TIL+NC+FLAM+ I+EAE Sbjct: 7 TFCVVSKRFRKNYIHRFTATRSLFWYSPWSPVRRACVYLSTNQYFDYFVMATILLNCVFLAMSETIEEAE 76
BLAST of conserved hypothetical protein vs. nr
Match: gi|913332565|ref|XP_013197920.1| (PREDICTED: sodium channel protein 60E-like [Amyelois transitella]) HSP 1 Score: 130.568 bits (327), Expect = 1.244e-30 Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0 Query: 167 SSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 + YIFL IY+ EM IKC+A+GFILN YTYLRNPWNWLDF+VI SGY T +E+GNLAGLRTFRVLRALKTVSIMP Sbjct: 224 ETIEEAEYIFLAIYTAEMIIKCIAKGFILNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMP 303 HSP 2 Score: 103.219 bits (256), Expect = 2.594e-21 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 0 Query: 1 SFCVVSRRFQKHYVQRFNATRSLFLFPPWNKLRTAAIYLCTNQYFDYVVMITILVNCIFLAMTHPIDEAE 70 +FCVVS+RF+K+Y+ RF ATRSLF + PW+ +R A +YL TNQYFDY VM TIL+NC+FLAM+ I+EAE Sbjct: 161 TFCVVSKRFRKNYIHRFTATRSLFWWSPWSSVRRACVYLSTNQYFDYFVMATILLNCVFLAMSETIEEAE 230
BLAST of conserved hypothetical protein vs. nr
Match: gi|930661340|gb|KPJ03268.1| (Sodium channel protein 60E [Papilio xuthus]) HSP 1 Score: 129.413 bits (324), Expect = 2.595e-30 Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0 Query: 167 SSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 + YIFL IY+ EM IKC+A+GFILN YTYLRNPWNWLDF+VI SGY T +E+GNLAGLRTFRVLRALKTVSIMP Sbjct: 15 ETIEEAEYIFLAIYTAEMIIKCIAKGFILNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMP 94
BLAST of conserved hypothetical protein vs. nr
Match: gi|1233160099|ref|XP_022194558.1| (sodium channel protein 60E-like [Nilaparvata lugens]) HSP 1 Score: 124.79 bits (312), Expect = 2.851e-30 Identity = 59/75 (78.67%), Postives = 64/75 (85.33%), Query Frame = 0 Query: 173 RYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMPS 247 YIFL IY+ EM IK VA+GFILN YTYLRNPWNWLDF+VI SGY T +E+GNLAGLRTFRVLRALKTVSIMP Sbjct: 190 EYIFLAIYTAEMIIKSVAKGFILNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMPG 264 HSP 2 Score: 107.071 bits (266), Expect = 1.257e-23 Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 1 SFCVVSRRFQKHYVQRFNATRSLFLFPPWNKLRTAAIYLCTNQYFDYVVMITILVNCIFLAMTHPIDEAE 70 +FCVVS+RF+K+Y+ RF AT S FLF PWN +R I+L TNQYFDYVVM TIL+NC+FLA T P++EAE Sbjct: 121 TFCVVSKRFRKNYIHRFTATNSFFLFSPWNSIRRTCIFLSTNQYFDYVVMTTILLNCVFLAKTEPLEEAE 190
BLAST of conserved hypothetical protein vs. nr
Match: gi|1274103606|ref|XP_022837280.1| (sodium channel protein 60E-like [Spodoptera litura]) HSP 1 Score: 129.413 bits (324), Expect = 2.942e-30 Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0 Query: 167 SSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 + YIFL IY+ EM IKC+A+GFILN YTYLRNPWNWLDF+VI SGY T +E+GNLAGLRTFRVLRALKTVSIMP Sbjct: 15 ETIEEAEYIFLAIYTAEMIIKCIAKGFILNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMP 94
BLAST of conserved hypothetical protein vs. nr
Match: gi|910320537|ref|XP_013163159.1| (PREDICTED: sodium channel protein 60E-like [Papilio xuthus]) HSP 1 Score: 129.413 bits (324), Expect = 3.054e-30 Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0 Query: 167 SSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 + YIFL IY+ EM IKC+A+GFILN YTYLRNPWNWLDF+VI SGY T +E+GNLAGLRTFRVLRALKTVSIMP Sbjct: 229 ETIEEAEYIFLAIYTAEMIIKCIAKGFILNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMP 308 HSP 2 Score: 102.834 bits (255), Expect = 4.708e-21 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 0 Query: 1 SFCVVSRRFQKHYVQRFNATRSLFLFPPWNKLRTAAIYLCTNQYFDYVVMITILVNCIFLAMTHPIDEAE 70 +FCVVS+RF+K+Y+ RF ATRSLF + PW+ +R A +YL TNQYFDY VM TIL+NC+FLAM+ I+EAE Sbjct: 166 TFCVVSKRFRKNYIHRFTATRSLFWWSPWSPVRRACVYLSTNQYFDYFVMATILLNCVFLAMSETIEEAE 235
BLAST of conserved hypothetical protein vs. nr
Match: gi|827537995|ref|XP_012549179.1| (voltage-dependent cation channel SC1 isoform X1 [Bombyx mori]) HSP 1 Score: 129.413 bits (324), Expect = 3.105e-30 Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0 Query: 167 SSFSPYRYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 + YIFL IY+ EM IKC+A+GFILN YTYLRNPWNWLDF+VI SGY T +E+GNLAGLRTFRVLRALKTVSIMP Sbjct: 227 ETIEEAEYIFLAIYTAEMIIKCIAKGFILNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMP 306 HSP 2 Score: 102.449 bits (254), Expect = 5.068e-21 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 0 Query: 1 SFCVVSRRFQKHYVQRFNATRSLFLFPPWNKLRTAAIYLCTNQYFDYVVMITILVNCIFLAMTHPIDEAE 70 +FCVVS+RF+K+Y+ RF ATRSLF + PW+ +R A +YL TNQYFDY VM TIL+NC+FLAM+ I+EAE Sbjct: 164 TFCVVSKRFRKNYIHRFTATRSLFWWSPWSPVRRACVYLSTNQYFDYFVMATILLNCVFLAMSETIEEAE 233
BLAST of conserved hypothetical protein vs. nr
Match: gi|1059405667|ref|XP_017775723.1| (PREDICTED: sodium channel protein 60E-like, partial [Nicrophorus vespilloides]) HSP 1 Score: 119.398 bits (298), Expect = 3.204e-30 Identity = 54/74 (72.97%), Postives = 64/74 (86.49%), Query Frame = 0 Query: 173 RYIFLGIYSLEMTIKCVARGFILNNYTYLRNPWNWLDFIVILSGYLTSFIEMGNLAGLRTFRVLRALKTVSIMP 246 ++FL IY+ EM IK VA+GFILN YTYLRNPWNWLDF+VI SGY T +++GNLAGLRTFRVLRALKT+SI+P Sbjct: 70 EFVFLAIYTAEMIIKSVAKGFILNKYTYLRNPWNWLDFVVITSGYATIGMDVGNLAGLRTFRVLRALKTISILP 143 HSP 2 Score: 103.605 bits (257), Expect = 4.050e-24 Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 1 SFCVVSRRFQKHYVQRFNATRSLFLFPPWNKLRTAAIYLCTNQYFDYVVMITILVNCIFLAMTHPIDEAE 70 +FCVVS+RF+K+Y+ RF AT S F+F PW++ R A IYL TNQ+FDY+VM TIL+NC+FLAM I+EAE Sbjct: 1 TFCVVSKRFRKNYIHRFTATSSFFMFSPWSRYRKACIYLSTNQFFDYLVMATILLNCVFLAMAETIEEAE 70 The following BLAST results are available for this feature:
BLAST of conserved hypothetical protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 7
BLAST of conserved hypothetical protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of conserved hypothetical protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold259_size234575:101841..104985+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold259_size234575-snap-gene-1.16 ID=maker-scaffold259_size234575-snap-gene-1.16|Name=conserved hypothetical protein|organism=Tigriopus kingsejongensis|type=gene|length=3145bp|location=Sequence derived from alignment at scaffold259_size234575:101841..104985+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'conserved hypothetical protein' has the following synonyms
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