limbic system-associated membrane protein, maker-scaffold254_size236139-snap-gene-1.13 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of limbic system-associated membrane protein vs. L. salmonis genes
Match: EMLSAG00000003754 (supercontig:LSalAtl2s:LSalAtl2s2022:1309:13406:1 gene:EMLSAG00000003754 transcript:EMLSAT00000003754 description:"augustus_masked-LSalAtl2s2022-processed-gene-0.0") HSP 1 Score: 223.787 bits (569), Expect = 2.419e-73 Identity = 103/148 (69.59%), Postives = 129/148 (87.16%), Query Frame = 0 Query: 52 VFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFW 199 +F S N TVV+AHIGSTA L C VK+ SQ+GM+TWARL+DEYRPYSVLT+GDS YV+DKR +V+KPL QQ+ +WALQI++VT EDAGRYECQATT PPQ+IV++L+VVEA + ILG+ EKI+KSGS L+++C+LK+ATEKPLYIFW Sbjct: 35 IFGSHNGTVVRAHIGSTATLSCIVKEKSQYGMITWARLEDEYRPYSVLTVGDSTYVDDKRILVAKPL-QQNKRKDWALQIKKVTTEDAGRYECQATTXPPQSIVIQLKVVEAFAMILGSKEKILKSGSNLKIHCILKRATEKPLYIFW 181
BLAST of limbic system-associated membrane protein vs. L. salmonis genes
Match: EMLSAG00000007756 (supercontig:LSalAtl2s:LSalAtl2s453:133841:253679:1 gene:EMLSAG00000007756 transcript:EMLSAT00000007756 description:"maker-LSalAtl2s453-augustus-gene-2.7") HSP 1 Score: 137.502 bits (345), Expect = 2.169e-38 Identity = 92/278 (33.09%), Postives = 142/278 (51.08%), Query Frame = 0 Query: 6 RHQHHHRRRHQRQRRHPEDPKSGPASE---TWSPSQEMSEDTTVPQQEWVFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLN--WALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLV-----SNEDF-ASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGG-----NSAASVQNE 267 + Q+ HR+ H+R+ + +S E W+ DT +PQ + T +K G TA L C+V +G ++W R +D + +LT+G Y D RY K ++++N W LQI V D GRYECQ +T P ++ ++L V++ + ILG E + GS+L L CV+K E +I WYH + I+Y + RG + N + +STL++ D+G YTC P N R +SV+VHV NG ++ AS+QN+ Sbjct: 31 KQQYRHRQHHRREATNLTPNRSSKTPERFKLWADGPNF--DTDLPQ--------DVTAIK---GQTAYLTCRVFEGRN-KTVSWIRHRDLH----ILTVGRYTYTADLRY------KSIYNHVNDEWTLQIASVQKRDEGRYECQISTQPVRSFFVKLSVLDPKANILGDDEVHVSVGSELNLTCVVKSTHEPSAFILWYHGDNTIDYSSPRGGIEVKTRRHNHGYPSSTLIIENVGPHDSGKYTCDPSNARSASVSVHVSNGEKPEAIHTNASIQNQ 284
BLAST of limbic system-associated membrane protein vs. L. salmonis genes
Match: EMLSAG00000007749 (supercontig:LSalAtl2s:LSalAtl2s451:149372:173140:-1 gene:EMLSAG00000007749 transcript:EMLSAT00000007749 description:"maker-LSalAtl2s451-augustus-gene-2.6") HSP 1 Score: 117.472 bits (293), Expect = 3.158e-31 Identity = 79/223 (35.43%), Postives = 122/223 (54.71%), Query Frame = 0 Query: 44 TTVPQQEWV--FLSENATVVKAHIGSTAILDCKVKK-GSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRY-IVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRG---VLVSNEDFAST--LVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNG 257 TT+ Q + + F +++ V A + TA+L+C+VK G++ ++W R D + +LTIG Y D R+ + K L + DYL LQI+ T D G+YECQ +T PP + ++ L + + + ILG + GS + L C++ + P YIFW HD +I+YD+ RG V+ D A++ LV+ A SD G Y+CSP S+ VHV+ G Sbjct: 41 TTILQSDAIPYFDMKHSLNVTAVLXQTALLNCRVKNLGNK--TVSWIRHADTH----LLTIGRYTYTSDLRFKAIHKILSE--DYL---LQIKPTTRRDRGKYECQISTTPPLSHIVNLDIAKPKTSILGGPDIFFDQGSTINLTCLITDSPMPPSYIFWRHDQAIISYDSVRGGVSVITEKGDNATSSFLVIQNARNSDNGIYSCSPSLGDTVSINVHVLQG 252
BLAST of limbic system-associated membrane protein vs. L. salmonis genes
Match: EMLSAG00000006563 (supercontig:LSalAtl2s:LSalAtl2s35:3762:21248:1 gene:EMLSAG00000006563 transcript:EMLSAT00000006563 description:"maker-LSalAtl2s35-augustus-gene-0.12") HSP 1 Score: 108.227 bits (269), Expect = 2.661e-28 Identity = 66/190 (34.74%), Postives = 98/190 (51.58%), Query Frame = 0 Query: 84 MTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILG-----TSEKIIKSGSKLQLNCVLKKATEKP-LYIFWYHDNRMINYDTDRGVLVSNEDF-----ASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAA 262 ++W R P +LT G + Y D R+ + + +W LQ+Q D G YEC +T PP +RL V+ EI EK + GS ++L C++++ KP Y+ W+H +R++NYDT+RG + D S L +AKAS D+GNYTC + +SV VH++NG N AA Sbjct: 1 VSWLRRTSNDIP-XLLTFGXATYSHDSRFQIFHEVPN-----DWKLQLQFTQIRDEGIYECLVSTNPPLVKKIRLNVIVPEIEIRDERNKEVVEKFYRGGSTIELKCIVEQIVGKPPEYVIWHHGDRLLNYDTERGGISVKTDLHKNGATSRLKIAKASNKDSGNYTCGMSSAF-ASVIVHILNGENPAA 183
BLAST of limbic system-associated membrane protein vs. L. salmonis genes
Match: EMLSAG00000008993 (supercontig:LSalAtl2s:LSalAtl2s563:193575:211879:1 gene:EMLSAG00000008993 transcript:EMLSAT00000008993 description:"maker-LSalAtl2s563-augustus-gene-1.7") HSP 1 Score: 105.531 bits (262), Expect = 2.970e-27 Identity = 64/183 (34.97%), Postives = 98/183 (53.55%), Query Frame = 0 Query: 84 MTWARLKDEYRPYSVLTIGDSNYVEDKRY-IVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRG---VLVSNED--FASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNS 260 ++W R D +LTIG Y D R+ + K L + DYL LQI+ T D G+YECQ ++ PP + ++ L + + ILG ++ GS + L C++ ++ P YIFW H++ +I+YD+ RG V+ D +S L++ A D+G Y+CSP SV VHV+ G S Sbjct: 1 VSWVRHDDT----XLLTIGRYTYTSDLRFKAIHKELSE--DYL---LQIKPTTKRDGGKYECQISSTPPHSHIVNLEIAVPNTSILGGADIYFNLGSTINLTCLISESPIPPSYIFWRHNDEIISYDSTRGGVSVITDKGDSITSSFLIIQNAKHGDSGTYSCSPSLGDTISVNVHVLRGETS 174
BLAST of limbic system-associated membrane protein vs. L. salmonis genes
Match: EMLSAG00000008198 (supercontig:LSalAtl2s:LSalAtl2s494:255309:428748:-1 gene:EMLSAG00000008198 transcript:EMLSAT00000008198 description:"maker-LSalAtl2s494-augustus-gene-4.15") HSP 1 Score: 105.531 bits (262), Expect = 9.034e-27 Identity = 62/184 (33.70%), Postives = 101/184 (54.89%), Query Frame = 0 Query: 84 MTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLN-WALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRG---VLVSNEDFAST-LVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAA 262 ++W R +D + +LT+G Y + R+ Y N W L+I+ +T +D G+YECQ +T PP + L+VVE +EILG + I GS + L CV K + P + WYH++ +I YD+ RG V+ D ++ L++ +A ++D+G Y C P N +S+ +H++ G N A Sbjct: 54 VSWIRHRDIH----LLTVGLYTYTLENRFSA-----YHLPYTNYWQLRIKDLTHKDEGKYECQVSTTPPIGHQIMLKVVEPHTEILGGPDMFINKGSTINLTCVSKFSPAPPPDVIWYHNDEVIAYDSPRGGVSVVTEKGDITTSHLLVQRAMSTDSGIYRCVPINSVEASLNLHILAGKNPDA 228
BLAST of limbic system-associated membrane protein vs. L. salmonis genes
Match: EMLSAG00000011422 (supercontig:LSalAtl2s:LSalAtl2s78:1206489:1207926:1 gene:EMLSAG00000011422 transcript:EMLSAT00000011422 description:"maker-LSalAtl2s78-augustus-gene-12.10") HSP 1 Score: 103.219 bits (256), Expect = 4.281e-26 Identity = 63/206 (30.58%), Postives = 104/206 (50.49%), Query Frame = 0 Query: 84 MTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVL----RLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLV------------------------------SNEDFASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVM 255 ++W R +D +LTIG Y ED R+ +PL + + L WAL+I+ + ED G YECQ + + L RLR++++ + I G E+ +K+ S+L L C ++K++ P +I+WYH+ ++NY +GV + N AS L + + + D+GNYTCSP N + +V VH++ Sbjct: 1 VSWLRTRD----LRILTIGKIRYTEDPRF---QPLHTEGNDL-WALKIRNASFEDQGIYECQVSYHGDTEKKLKWPXRLRILDSHAVIPGNQERHVKARSRLLLRCFIEKSSGPPSFIYWYHNGNVMNYSDRQGVTIRTLSESESTLPSPSLRSSSSASRKRNLKRKRNNHPASVLTINRVTAKDSGNYTCSPSNAKNHTVQVHIV 198
BLAST of limbic system-associated membrane protein vs. L. salmonis genes
Match: EMLSAG00000006565 (supercontig:LSalAtl2s:LSalAtl2s35:656245:794720:1 gene:EMLSAG00000006565 transcript:EMLSAT00000006565 description:"maker-LSalAtl2s35-augustus-gene-8.21") HSP 1 Score: 104.375 bits (259), Expect = 4.347e-26 Identity = 66/212 (31.13%), Postives = 109/212 (51.42%), Query Frame = 0 Query: 61 VKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKI-IKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLVSNEDF--------------ASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNG 257 V A +G TA+L C + Q ++W R D +++++G Y++DKR ++ H+ W L I V D G YECQ + P + ++ L VV+ +EILG S+ + I S + L C++ + EKP +IFW H+ + + Y ++ S ED S+L+L +SD+G Y C+P N P+S+ +H++NG Sbjct: 56 VSASVGRTAMLKCTISNLGQ-KSVSWVRHND----VNLISVGKYKYIKDKR------IRILHESHEWVLIITDVQFFDKGLYECQVNSSPRVSKIISLNVVQPYTEILGGSKDVFINLDSAVNLTCII-HSPEKPAHIFWSHNGKPV-YWSETKKPDSEEDHYIIQRPREKEDSFSVSSLILQTTKSSDSGRYECNPSNTAPASIFIHILNG 254
BLAST of limbic system-associated membrane protein vs. L. salmonis genes
Match: EMLSAG00000003397 (supercontig:LSalAtl2s:LSalAtl2s186:89682:229943:1 gene:EMLSAG00000003397 transcript:EMLSAT00000003397 description:"maker-LSalAtl2s186-augustus-gene-2.14") HSP 1 Score: 101.679 bits (252), Expect = 9.544e-25 Identity = 71/241 (29.46%), Postives = 110/241 (45.64%), Query Frame = 0 Query: 44 TTVPQQEWVFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEIL-GTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLVS-------NEDF--------------ASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAA 262 +TV + + T G A L+CKV ++W R KD + +L IG+ +V+ R+ L Y +W L+I+ VT ED G YECQ +T P L VV + I+ G E ++ GS + L CV+ E P +FWY + I D++ GV + N +F + L + +A+ D G Y+CSP N++ +S+ +HV+ N AA Sbjct: 97 STVHRHGLPYFENTTTQFTVQEGHHAFLNCKVHNLYN-QTVSWIRNKDSH----ILFIGNVKFVDGNRF----ELLSGDTYGDWTLKIKFVTEEDDGGYECQVSTSPKIMRTFHLNVVVPIVMIINGDVEMHLEVGSAVHLECVISNCLEDPQVVFWYKNGHRI-LDSETGVAIHSVLEEDVNPEFRVKDPKRRGNGRRTMTRLSIEEATAGDAGMYSCSPSNLKSASINLHVIKDENPAA 327
BLAST of limbic system-associated membrane protein vs. L. salmonis genes
Match: EMLSAG00000007713 (supercontig:LSalAtl2s:LSalAtl2s44:116585:206246:-1 gene:EMLSAG00000007713 transcript:EMLSAT00000007713 description:"maker-LSalAtl2s44-augustus-gene-2.5") HSP 1 Score: 98.2117 bits (243), Expect = 1.421e-24 Identity = 57/180 (31.67%), Postives = 98/180 (54.44%), Query Frame = 0 Query: 98 VLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQ----TIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINY----DTDRGVL---VSNEDFASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAASVQN 266 +LTIGD Y ED+R+ P+ + + W L++ + D+G YECQ + T+ L V+++ + I +++ ++ GSKLQL+C + + + P Y++WY + ++NY D V ++N S L + S +GNY+CSP N P+SV VH++N N A++Q+ Sbjct: 11 ILTIGDILYTEDQRF---APIHENGSDV-WMLKVGKAEVRDSGEYECQIAYHDDNEKKLTMTFSLTVLDSRAFIQKSADLHVQIGSKLQLSCFVLRPSAPPNYVYWYRNEHVLNYSPSVDIRSQVFKDSIANGTEISHLTIDYVSVIHSGNYSCSPSNASPASVMVHIVNDENRPAAMQH 186
BLAST of limbic system-associated membrane protein vs. SwissProt
Match: gi|1099263079|sp|G5ED00.1|ZIG8_CAEEL (RecName: Full=Zwei Ig domain protein zig-8; AltName: Full=2 Ig domain protein zig-8; Flags: Precursor) HSP 1 Score: 63.5438 bits (153), Expect = 2.765e-10 Identity = 56/208 (26.92%), Postives = 96/208 (46.15%), Query Frame = 0 Query: 59 TVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVE----AVSEILGTSEKIIK--SGSKLQLNCVLKKA--TEKPLYIFWYHDNRMINY-DTDRGVLVSNED---FASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHV 254 T+V + A L C V ++ + W R+ D ++LT G+ + D R+ VSK W L ++R +D+G Y C+ + L+V+E + S + S K++ SG ++ LNC + E+ L + W D IN+ DT++ +L D T+ + KA+ D GNY C ++ + +S VH+ Sbjct: 43 TIVNVVAENPAYLHCSVPPDAEHEI-AWTRVSDG----ALLTAGNRTFTRDPRWQVSKKSANI-----WVLNLRRAEQQDSGCYLCEINDKHNTVYAVYLKVLEPPLPSPSSLQKKSTKLMANMSGDEVVLNCTVTSTDKDEEVLDVVWTRDGNTINFNDTEKYILKVKRDAGVVIETMRIRKATMEDDGNYACE-HSQQKASQIVHI 239
BLAST of limbic system-associated membrane protein vs. SwissProt
Match: gi|27151645|sp|Q9P121.1|NTRI_HUMAN (RecName: Full=Neurotrimin; Short=hNT; AltName: Full=IgLON family member 2; Flags: Precursor) HSP 1 Score: 57.7658 bits (138), Expect = 3.746e-8 Identity = 42/121 (34.71%), Postives = 59/121 (48.76%), Query Frame = 0 Query: 129 LQIQRVTPEDAGRYECQATTYPPQTIVLRLRVV----EAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIF-WYHDNRMINYDTDRGVLVSNEDFASTLVLAKASTSDTGNYTCSPYN 244 L+IQ +T E +G YEC A+ +V R++V +SE GT + G K L C +A+ P F WY D++ + + +GV V N F S L+ S D GNYTC N Sbjct: 186 LEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTG---VPVGQKGTLQC---EASAVPSAEFQWYKDDKRL-IEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASN 299
BLAST of limbic system-associated membrane protein vs. SwissProt
Match: gi|75069854|sp|Q58DA5.1|NTRI_BOVIN (RecName: Full=Neurotrimin; Flags: Precursor) HSP 1 Score: 57.3806 bits (137), Expect = 4.080e-8 Identity = 42/121 (34.71%), Postives = 59/121 (48.76%), Query Frame = 0 Query: 129 LQIQRVTPEDAGRYECQATTYPPQTIVLRLRVV----EAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIF-WYHDNRMINYDTDRGVLVSNEDFASTLVLAKASTSDTGNYTCSPYN 244 L+IQ +T E +G YEC A+ +V R++V +SE GT + G K L C +A+ P F WY D++ + + +GV V N F S L+ S D GNYTC N Sbjct: 186 LEIQGITREQSGYYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTG---VPVGQKGTLQC---EASAVPSAEFQWYKDDKRL-VEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASN 299
BLAST of limbic system-associated membrane protein vs. nr
Match: gi|1325312528|ref|XP_023337904.1| (vascular endothelial growth factor receptor 1-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 235.343 bits (599), Expect = 2.832e-72 Identity = 123/270 (45.56%), Postives = 175/270 (64.81%), Query Frame = 0 Query: 1 LGTYERHQHHHRRRHQRQRRHPEDPKSGPASETWSPSQEMSEDTTVPQQEWVFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLVSNEDFASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAASVQNEDKS 270 L +E HHR H + P + +S T + S+E+ D V + VF S N +V+ AH GST L C++ K Q G++TW L E +PY++LT+GDS+Y+++ R+ + KP++ HD W L I+ V ED+G YECQATT+PPQ+I+++L V+EA +EI+GT EK+ KS S LQL C L+KAT KP +IFWYH+NRMINYDTDRG+ V + STL ++ S S +GNYTC P N++P SV V ++ SA ++Q+ S Sbjct: 15 LDCWETRIRHHRN-HDEEHLEPVRTELLTSSGT-TNSKELV-DEVVDKDGPVFRSRNNSVMYAHAGSTTSLSCQIFKDVQHGVITWGLLAQEGQPYTLLTVGDSSYIDNLRFSIEKPIR--HD--QWNLLIKPVEIEDSGTYECQATTHPPQSIMVKLIVLEAYAEIIGTKEKVFKSESNLQLVCALQKATAKPDFIFWYHNNRMINYDTDRGISVVEDSNGSTLTISSVSVSQSGNYTCKPSNMKPDSVVVTILAESKSANALQDNKVS 277
BLAST of limbic system-associated membrane protein vs. nr
Match: gi|1325312530|ref|XP_023337905.1| (vascular endothelial growth factor receptor 1-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 234.572 bits (597), Expect = 6.744e-72 Identity = 119/256 (46.48%), Postives = 170/256 (66.41%), Query Frame = 0 Query: 11 HRRRHQRQRRHPEDPKSGPASETWSPSQEMSEDTTVPQQEWVFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLVSNEDFASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAASVQN 266 H R H + P + +S T + S+E+ D V + VF S N +V+ AH GST L C++ K Q G++TW L E +PY++LT+GDS+Y+++ R+ + KP++ HD W L I+ V ED+G YECQATT+PPQ+I+++L V+EA +EI+GT EK+ KS S LQL C L+KAT KP +IFWYH+NRMINYDTDRG+ V + STL ++ S S +GNYTC P N++P SV V ++ SA ++Q+ Sbjct: 23 HHRNHDEEHLEPVRTELLTSSGT-TNSKELV-DEVVDKDGPVFRSRNNSVMYAHAGSTTSLSCQIFKDVQHGVITWGLLAQEGQPYTLLTVGDSSYIDNLRFSIEKPIR--HD--QWNLLIKPVEIEDSGTYECQATTHPPQSIMVKLIVLEAYAEIIGTKEKVFKSESNLQLVCALQKATAKPDFIFWYHNNRMINYDTDRGISVVEDSNGSTLTISSVSVSQSGNYTCKPSNMKPDSVVVTILAESKSANALQD 272
BLAST of limbic system-associated membrane protein vs. nr
Match: gi|1227969987|ref|XP_021916385.1| (uncharacterized protein LOC110828201 isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 213.001 bits (541), Expect = 1.178e-63 Identity = 105/211 (49.76%), Postives = 142/211 (67.30%), Query Frame = 0 Query: 52 VFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLVSNEDFASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAA 262 VF +EN+TVV A ST L C V+K G+++W R KD + +LT+G + Y D R++V Q NW LQI+ V P D G YECQ +T+PP +I + LRV+EA +EILG + IKSGSKL+L C L+++TE P+Y+FWYH++ MINYD DRGV V N+ +S LV+A+A SD+GNY+C P N RP+S+ VHV+NG AA Sbjct: 43 VFTTENSTVVIAQTASTTTLPCGVRKFGN-GVVSWIRRKD----FHLLTVGLATYSSDDRFLVEHARHLQ----NWGLQIKFVQPRDEGWYECQVSTHPPTSIFVELRVIEAAAEILGAPDLHIKSGSKLRLVCTLRQSTEAPVYVFWYHEDHMINYDKDRGVEVRNDRSSSVLVVAEAQKSDSGNYSCVPSNARPASINVHVLNGEKPAA 244
BLAST of limbic system-associated membrane protein vs. nr
Match: gi|1227969985|ref|XP_021916384.1| (uncharacterized protein LOC110828201 isoform X1 [Zootermopsis nevadensis]) HSP 1 Score: 213.001 bits (541), Expect = 5.095e-63 Identity = 105/211 (49.76%), Postives = 142/211 (67.30%), Query Frame = 0 Query: 52 VFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLVSNEDFASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAA 262 VF +EN+TVV A ST L C V+K G+++W R KD + +LT+G + Y D R++V Q NW LQI+ V P D G YECQ +T+PP +I + LRV+EA +EILG + IKSGSKL+L C L+++TE P+Y+FWYH++ MINYD DRGV V N+ +S LV+A+A SD+GNY+C P N RP+S+ VHV+NG AA Sbjct: 90 VFTTENSTVVIAQTASTTTLPCGVRKFGN-GVVSWIRRKD----FHLLTVGLATYSSDDRFLVEHARHLQ----NWGLQIKFVQPRDEGWYECQVSTHPPTSIFVELRVIEAAAEILGAPDLHIKSGSKLRLVCTLRQSTEAPVYVFWYHEDHMINYDKDRGVEVRNDRSSSVLVVAEAQKSDSGNYSCVPSNARPASINVHVLNGEKPAA 291
BLAST of limbic system-associated membrane protein vs. nr
Match: gi|1339089514|ref|XP_023705892.1| (uncharacterized protein LOC111863630 [Cryptotermes secundus]) HSP 1 Score: 211.46 bits (537), Expect = 2.257e-62 Identity = 106/222 (47.75%), Postives = 143/222 (64.41%), Query Frame = 0 Query: 52 VFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLVSNEDFASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAASVQNEDKSPPS 273 +F +EN TVV A ST L C VKK G+++W R KD Y +LT+G + Y D R++V Q NW LQI+ V P DAG YECQ +T+PP +I + L+V+EA +EILG + IKSGSKL+L C L+++TE P+Y+FWYH+ RMINYD +RGV V ++ +S LV+A+A D+GNY+C P N R +S+ VHV+NG AA S PS Sbjct: 90 IFTTENCTVVTAQTASTTTLPCGVKKFGN-GVVSWIRRKD----YHLLTVGLATYSSDDRFLVEHARHLQ----NWGLQIKYVQPRDAGWYECQVSTHPPASIFVELKVIEAAAEILGAPDLHIKSGSKLRLVCTLRQSTEPPVYVFWYHEERMINYDKERGVAVHSDRSSSVLVVAEAQKRDSGNYSCVPSNARSASINVHVLNGEKPAAMQHGSRSSAPS 302
BLAST of limbic system-associated membrane protein vs. nr
Match: gi|1330918112|gb|PNF35363.1| (hypothetical protein B7P43_G02577 [Cryptotermes secundus]) HSP 1 Score: 200.29 bits (508), Expect = 1.087e-59 Identity = 99/211 (46.92%), Postives = 139/211 (65.88%), Query Frame = 0 Query: 47 PQQEWVFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLVSNEDFASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNG 257 P Q+ VFLSEN T+V A IGST IL C+V + G ++W R KD Y +LT+G + Y D R+ + H+ +WAL ++ D G YECQ +T+PP ++ + L++VEA +EI G +K +KSGS L+L CVLKK+TE P+Y+FWYH+ RMINYD RGV V + S LV+A+A D+GNY+C P N P+S++VH++NG Sbjct: 3 PPQD-VFLSENCTIVLAQIGSTPILHCEVADIGE-GTVSWIRRKD----YHLLTVGLATYSSDDRFFTA----HVHNAQDWALHVRYARAGDGGLYECQVSTHPPSSLFVELQLVEARAEIPGGPDKFVKSGSSLRLMCVLKKSTEPPVYVFWYHETRMINYDLGRGVRVRHGRHFSELVVAEAHKHDSGNYSCVPSNAHPASISVHILNG 203
BLAST of limbic system-associated membrane protein vs. nr
Match: gi|1339089470|ref|XP_023705870.1| (titin-like [Cryptotermes secundus] >gi|1339089472|ref|XP_023705871.1| titin-like [Cryptotermes secundus]) HSP 1 Score: 201.83 bits (512), Expect = 9.968e-59 Identity = 104/224 (46.43%), Postives = 146/224 (65.18%), Query Frame = 0 Query: 47 PQQEWVFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLVSNEDFASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAASVQNEDKS 270 P Q+ VFLSEN T+V A IGST IL C+V + G ++W R KD Y +LT+G + Y D R+ + H+ +WAL ++ D G YECQ +T+PP ++ + L++VEA +EI G +K +KSGS L+L CVLKK+TE P+Y+FWYH+ RMINYD RGV V + S LV+A+A D+GNY+C P N P+S++VH++NG AA +Q+ KS Sbjct: 92 PPQD-VFLSENCTIVLAQIGSTPILHCEVADIGE-GTVSWIRRKD----YHLLTVGLATYSSDDRFFTA----HVHNAQDWALHVRYARAGDGGLYECQVSTHPPSSLFVELQLVEARAEIPGGPDKFVKSGSSLRLMCVLKKSTEPPVYVFWYHETRMINYDLGRGVRVRHGRHFSELVVAEAHKHDSGNYSCVPSNAHPASISVHILNGEEPAA-MQHGSKS 304
BLAST of limbic system-associated membrane protein vs. nr
Match: gi|1227970007|ref|XP_021916396.1| (titin-like [Zootermopsis nevadensis] >gi|1227970009|ref|XP_021916397.1| titin-like [Zootermopsis nevadensis]) HSP 1 Score: 199.904 bits (507), Expect = 6.619e-58 Identity = 95/211 (45.02%), Postives = 136/211 (64.45%), Query Frame = 0 Query: 52 VFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLVSNEDFASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAA 262 +FLSEN T V A IGST IL C+V + G ++W R KD Y +LT+G + Y D R+ + H +WAL ++ D G YECQ +T+PP ++ + L++VEA +EI G +K +KSGS L+L C+ KK+TE+P+Y+FWYH+ RMINYD RG+ V + + S LVL +A D+GNY+C P N P+S++VH++NG AA Sbjct: 96 IFLSENCTTVLAQIGSTPILHCEVADIGE-GTVSWIRRKD----YHLLTVGLATYSSDDRFFAA----HVHSPQDWALHVRHARARDGGLYECQVSTHPPSSLFVELQLVEARAEIPGAPDKFVKSGSSLRLTCLFKKSTEQPVYVFWYHETRMINYDLGRGIQVRHGRYFSELVLEQAQKHDSGNYSCVPSNAHPASISVHILNGEKPAA 297
BLAST of limbic system-associated membrane protein vs. nr
Match: gi|1233161116|ref|XP_022199915.1| (uncharacterized protein LOC111056813 [Nilaparvata lugens]) HSP 1 Score: 198.749 bits (504), Expect = 4.021e-57 Identity = 107/249 (42.97%), Postives = 152/249 (61.04%), Query Frame = 0 Query: 17 RQRRHPEDPKSGPASETWS---PSQEMSEDTTVPQQEWVFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLVSNEDFASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAA 262 R +R E+ + GP S T PS S T++ + +F ++N+TVV A GSTA L C V+K G+++W R KD Y +LT+G + Y D R++V Q NW LQI+ V D G YECQ +T+PP +I ++L VVEA +EI G + IKSGS ++L C ++++TE P+Y+FWY RMINYD +RGV V+ + S L + A+ +D+GNYTC P N P+S+ VHV+NG AA Sbjct: 100 RSKRSLEEGRGGPNSSTGKRHRPSDN-SVATSLTARGAIFATDNSTVVTAQKGSTATLPCVVRKFGT-GVVSWIRRKD----YHLLTVGLATYSSDDRFLVEHARHLQ----NWGLQIKFVQESDEGMYECQVSTHPPASIFIQLNVVEAAAEISGAPDLHIKSGSLMRLVCKVRQSTEPPVYVFWYQGQRMINYDRERGVAVTADRKGSVLTVQSAADTDSGNYTCVPSNAHPASINVHVLNGEKPAA 338
BLAST of limbic system-associated membrane protein vs. nr
Match: gi|1101366333|ref|XP_018914395.1| (PREDICTED: hemicentin-2-like [Bemisia tabaci]) HSP 1 Score: 197.593 bits (501), Expect = 5.318e-57 Identity = 101/230 (43.91%), Postives = 148/230 (64.35%), Query Frame = 0 Query: 52 VFLSENATVVKAHIGSTAILDCKVKKGSQFGMMTWARLKDEYRPYSVLTIGDSNYVEDKRYIVSKPLKQQHDYLNWALQIQRVTPEDAGRYECQATTYPPQTIVLRLRVVEAVSEILGTSEKIIKSGSKLQLNCVLKKATEKPLYIFWYHDNRMINYDTDRGVLVSNEDFASTLVLAKASTSDTGNYTCSPYNIRPSSVTVHVMNGGNSAASVQNEDKSPPSAAVQSNAG 281 VF +EN+TV+ A GSTA L C ++K G+++W R +D ++LT+G + Y D R+ V Q NW LQI+ V P+DAG YECQ +T+P +I + L+V+EA++EI+G + IK GS+L+L C L+ +TE P+++FWYH RMINYD +RGV V ++ S L + A+TSD+GNYTC+P N RP+S+ VHV+N V N +K P + + S +G Sbjct: 89 VFATENSTVIVAQTGSTATLPCTIRKFGT-GVVSWIRRRD----LNLLTVGLATYSSDDRFSVDHIRHLQ----NWGLQIKFVEPDDAGMYECQISTHPAVSIFVELKVIEAIAEIVGAPDLHIKGGSRLRLVCALRDSTEPPVFVFWYHGPRMINYDRERGVTVRSDLSGSVLTVEAANTSDSGNYTCTPSNARPASINVHVLN-------VMNGEK-PAAMHIGSRSG 301 The following BLAST results are available for this feature:
BLAST of limbic system-associated membrane protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of limbic system-associated membrane protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 3
BLAST of limbic system-associated membrane protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold254_size236139:130738..139301- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold254_size236139-snap-gene-1.13 ID=maker-scaffold254_size236139-snap-gene-1.13|Name=limbic system-associated membrane protein|organism=Tigriopus kingsejongensis|type=gene|length=8564bp|location=Sequence derived from alignment at scaffold254_size236139:130738..139301- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'limbic system-associated membrane protein' has the following synonyms
Add to Basket
|