PREDICTED: collectin-12-like, maker-scaffold249_size238305-snap-gene-1.13 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of PREDICTED: collectin-12-like vs. L. salmonis genes
Match: EMLSAG00000000316 (supercontig:LSalAtl2s:LSalAtl2s1047:1859:17658:-1 gene:EMLSAG00000000316 transcript:EMLSAT00000000316 description:"maker-LSalAtl2s1047-snap-gene-0.10") HSP 1 Score: 142.51 bits (358), Expect = 4.669e-35 Identity = 91/235 (38.72%), Postives = 121/235 (51.49%), Query Frame = 0 Query: 349 LLPLNGCQVRDISEPGASGVEACLCTTNLCNSRDGAV--GAAVGPIQ-------------SAPIRNPPTQPPANINPVAVPQTVTTR------------RPSQN------------QIQGSQCPPKFKQLPTGCYFFAQERMGWIEAKKECEFMTPGTNLVAIETPGERDALMSEIS-SFGRSRYEFWTAGNDIDREDEWVWSGSRGRKV--PEFGWIDLPITSAEENCLTWSLT 541 LLP GC +RDISEP +S +EACLCTT+ CN G G A IQ ++P R+ ++ + N +T RP N ++ + CP + PTGCY + RMGWIEAKK CE + NL+AI+ ER A++ IS S R+R+EFW GNDI+ E+ W W G G + P+FGW+D P+ S EENCLTWS+T Sbjct: 1077 LLPTTGCNIRDISEPQSSSIEACLCTTDFCNDDLGRSPGGDATSQIQERQTTRSRFTDTTNSPTRSRFSETTKSSNFFERTTKASTFFDQKSRASTPGFRPDFNDLPDKFEFNRNDNLRKTSCPRGYTLTPTGCYQISDRRMGWIEAKKLCE--SENGNLLAIDNEEERQAILELISESSPRTRFEFWLGGNDIEIENRWXWXGF-GNTILXPDFGWLDRPVPSVEENCLTWSIT 1308 HSP 2 Score: 127.102 bits (318), Expect = 3.373e-30 Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 0 Query: 75 RVLCHQCGSLFSGSNNPDCTNFDASSEEFQGYCKPGESCLYYTWEKSVSETSIIRECITPSILLGPITNPLRASRTCDVRDISEFKSSSIMACICDTDKCNVGG 178 R+LCHQCGSLFSGS NP C +A E YCK GE+CL+Y+W+KS ETSIIREC + SILLG I PL+ R C +DI E ++S+I AC+CDT++CN G Sbjct: 884 RILCHQCGSLFSGSGNPPCEEGNAGKTE---YCKEGEACLWYSWKKSNIETSIIRECFSKSILLGSIDKPLQLRRECVPQDIXETRASNIYACLCDTERCNANG 984 HSP 3 Score: 106.301 bits (264), Expect = 1.020e-23 Identity = 65/161 (40.37%), Postives = 87/161 (54.04%), Query Frame = 0 Query: 64 TVPPRNANPNRRVLCHQCGSLFSGSNNPDCTNFDASSEEFQGYCKPGESCLYYTWEKSVSETSIIRECITPSILLGPITNPLRASRTCDVRDISEFKSSSIMACICDTDKCNVGGTSVTANSPGGFPGSRDSTP-EEPKSSQKTTLVLTDEETSILGGLGN 223 V + +PNRRV C CGSLFS ++ P+C FD S+ + Q C GE+CL+Y++ KS + +IIREC + SILLG I NP+ S C R + SIMACIC TD CN SP + TP P+S + +L + S+ G GN Sbjct: 746 VVKAKPIDPNRRVKCFACGSLFS-TDAPECDKFDVSASQQQTTCARGEACLWYSYHKSAGDIAIIRECFSTSILLGSIENPIAPSHECVPRPVE--NDDSIMACICATDFCN----GYDGGSPVNLKXTTTPTPLRLPQSQTERPRILCHQCGSLFSGSGN 899 HSP 4 Score: 101.293 bits (251), Expect = 3.981e-22 Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 0 Query: 281 QLQCFSCGSLFNPDK-KCDKFDPSDPSLIQTCGPGEACLLYSWEKSTGERATARECFSTSILLGPINNQLLPLNGCQVRDISEPGASGVEACLCTTNLCNSRDGAVGAAVGPIQSAPIRNPPTQPPANINPVAVPQTVTTR 420 +++CF+CGSLF+ D +CDKFD S TC GEACL YS+ KS G+ A RECFSTSILLG I N + P + C R + + + AC+C T+ CN DG +P+ T P P+ +PQ+ T R Sbjct: 757 RVKCFACGSLFSTDAPECDKFDVSASQQQTTCARGEACLWYSYHKSAGDIAIIRECFSTSILLGSIENPIAPSHECVPRPVENDDS--IMACICATDFCNGYDGG----------SPVNLKXTTTPT---PLRLPQSQTER 882 HSP 5 Score: 77.7962 bits (190), Expect = 6.755e-15 Identity = 44/102 (43.14%), Postives = 57/102 (55.88%), Query Frame = 0 Query: 281 QLQCFSCGSLFNPDKK--CDKFDPSDPSLIQTCGPGEACLLYSWEKSTGERATARECFSTSILLGPINNQLLPLNGCQVRDISEPGASGVEACLCTTNLCNS 380 ++ C CGSLF+ C++ + + C GEACL YSW+KS E + RECFS SILLG I+ L C +DI E AS + ACLC T CN+ Sbjct: 884 RILCHQCGSLFSGSGNPPCEE---GNAGKTEYCKEGEACLWYSWKKSNIETSIIRECFSKSILLGSIDKPLQLRRECVPQDIXETRASNIYACLCDTERCNA 982
BLAST of PREDICTED: collectin-12-like vs. SwissProt
Match: gi|322966877|sp|P86854.1|PLCL_MYTGA (RecName: Full=Perlucin-like protein; Flags: Precursor) HSP 1 Score: 55.8398 bits (133), Expect = 6.364e-8 Identity = 25/79 (31.65%), Postives = 40/79 (50.63%), Query Frame = 0 Query: 432 CPPKFKQLPTGCYFFAQERMGWIEAKKECEFMTPGTNLVAIETPGERDALMSEISSFGRSRYEFWTAGNDIDREDEWVW 510 CP +K+ T CYFF+ + W +A K+C+ M G LV I E ++ I+ + +Y +W D+ E +W W Sbjct: 30 CPAGWKKYKTNCYFFSPDGKNWHDAAKQCQTM--GGYLVKITDSEENSWVVDMITKSVKHKYGYWMGMADLKNEGDWRW 106
BLAST of PREDICTED: collectin-12-like vs. nr
Match: gi|1325332320|ref|XP_023348012.1| (flocculation protein FLO11-like [Eurytemora affinis]) HSP 1 Score: 218.394 bits (555), Expect = 3.311e-57 Identity = 134/340 (39.41%), Postives = 178/340 (52.35%), Query Frame = 0 Query: 75 RVLCHQCGSLFSGSNNPDCTNFDASSEEFQGYCKPGESCLYYTWEKSVSETSIIRECITPSILLGPITNPLRASRTCDVRDISEFKSSSIMACICDTDKCNVGGTSVTANSPGGFPGSRDSTPEEPKSSQKTTLVLTDEETSILGGLGNLNANTRDPPTRSPATRRPNTRQTTTTRRPATR--APATRPPPPPTRDSRP---------PQSPSGGGGQ----------LQCFSCGSLFNPDKKCDKFDPSDPSLIQTCGPGEACLLYSWEKSTGERATARECFSTSILLGPINNQLLPLNGCQVRDISEPGASGVEACLCTTNLCNSRDGAVGAAVGPIQ 393 RV CH+CGSLFS S+NP C F + QGYC+PGE+CL+Y+W+KS ++ + IREC + SILLG I NPL TC DISE S I AC+C++D CN + G +++ P S + + + R P+R+P RP Q + R+ + P T PP T +RP Q + Q LQC+SCGSL NP+KKCD FD S +QTC EACL+YSW+KS E AT RECF T +LLG I + L+P N CQ RDI++ + + ACLC T+ CN D GP++ Sbjct: 304 RVKCHKCGSLFSTSSNPTCEEFVEADPSQQGYCEPGEACLWYSWQKSENDIAHIRECFSTSILLGSIENPLLPETTCSPTDISESSLSKISACLCESDLCN------------SYRGPDENSSPRPNPSPAQSQPSSVQSQP---------PPERPQPSRNPVPERP---QASPLRQEPVKQEVPRTISTPPKTEPNRPFPDRLETNRLQVATDTAKQQQVFHPDKPGLQCYSCGSLLNPNKKCDSFDRRASSQVQTCLKDEACLMYSWKKSADEIATLRECFPTRVLLGSITDPLVPFNTCQQRDITDDSSGSIYACLCNTDFCNDDD---STPFGPLE 616 HSP 2 Score: 174.866 bits (442), Expect = 3.925e-42 Identity = 121/322 (37.58%), Postives = 157/322 (48.76%), Query Frame = 0 Query: 64 TVPPRNANPNRRVLCHQCGSLFSGSNNPDCTNFDASSEEFQGYCKPGESCLYYTWEKSVSETSIIRECITPSILLGPITNPLRASRTCDVRDISEFKSSSIMACICDTDKCNVGGTSVTANSPGGFPGSRDSTPEEPKSSQKTTLVLTDEETSILGGLGNLNANTRDPPTRSPATRRPNTRQTTTTRRPATRAPATRPPPPPTRDSRPPQSPSGGGGQLQCFSCGSLFNPDKK--CDKFDPSDPSLIQTCGPGEACLLYSWEKSTGERATARECFSTSILLGPINNQLLPLNGCQVRDISEPGASGVEACLCTTNLCNSRDG 383 TVPP NP+R V C CGSL+S ++ P C FD + C GE+CLYY+W S ++T++IREC SILLG I NP+ + C + +S +I+ACIC +D CN+ PG + P + S Q TT I T+ P + T RRP T +R +++C CGSLF+ C++F +DPS C PGEACL YSW+KS + A RECFSTSILLG I N LLP C DISE S + ACLC ++LCNS G Sbjct: 124 TVPPTRKNPSR-VQCFTCGSLYS-TDAPSCPVFDPTDPSQSKECDVGEACLYYSWRTSDTDTAVIRECFPTSILLGSIDNPVDPTPICSPEPV---ESDTILACICTSDLCNI------------LPGEPKTAPVQ--SIQTTTRAPVTAPPRIETARPPTQPPTQPPTQPPTRPSSRGSSSTQVERRPDTSPVRSR------------------SDRVKCHKCGSLFSTSSNPTCEEFVEADPSQQGYCEPGEACLWYSWQKSENDIAHIRECFSTSILLGSIENPLLPETTCSPTDISESSLSKISACLCESDLCNSYRG 408 HSP 3 Score: 99.7525 bits (247), Expect = 7.049e-18 Identity = 70/164 (42.68%), Postives = 90/164 (54.88%), Query Frame = 0 Query: 245 QTTTTRRPATRAPATRPPPPPTRDSRPPQSPSGGGGQLQCFSCGSLFNPDK-KCDKFDPSDPSLIQTCGPGEACLLYSWEKSTGERATARECFSTSILLGPINNQLLPLNGCQVRDISEPGASGVEACLCTTNLCNSRDGAVGAAVGPIQS------APIRNPP 401 QTTTT RP T PP TR ++PS ++QCF+CGSL++ D C FDP+DPS + C GEACL YSW S + A RECF TSILLG I+N + P C + + + AC+CT++LCN G A P+QS AP+ PP Sbjct: 110 QTTTTDRPRNNRLETVPP---TR-----KNPS----RVQCFTCGSLYSTDAPSCPVFDPTDPSQSKECDVGEACLYYSWRTSDTDTAVIRECFPTSILLGSIDNPVDPTPICSPEPVE---SDTILACICTSDLCNILPGEPKTA--PVQSIQTTTRAPVTAPP 256 HSP 4 Score: 76.6406 bits (187), Expect = 1.135e-10 Identity = 91/268 (33.96%), Postives = 121/268 (45.15%), Query Frame = 0 Query: 14 RPQFSPSTSRSPVISTTQRIPTSPPRTQ--RTTTPRTQRPRTRAPAPTQSAITVPPRNANPNRRVL-CHQCGSLFSGSNNPDCTNFDASSEEFQGYCKPGESCLYYTWEKSVSETSIIRECITPSILLGPITNPLRASRTCDVRDISEFKSSSIMACICDTDKCNVGGTSVTANSPGGFPGSRDSTPEEPKSSQKTTLVLTDEETSILGGLGNLNANTRDPPTRSPATRRPNTRQTTTTRRPA-----TRAPA----TRPP--PPPTR 267 RPQ SP + PV R ++PP+T+ R R + R + T V +P++ L C+ CGSL + N C +FD + C E+CL Y+W+KS E + +REC +LLG IT+PL TC RDI++ S SI AC+C+TD CN DSTP P + L T T + GG + +TTTTRRPA TRAPA TRPP PP+R Sbjct: 448 RPQASP-LRQEPVKQEVPRTISTPPKTEPNRPFPDRLETNRLQVATDTAKQQQV----FHPDKPGLQCYSCGSLLNP--NKKCDSFDRRASSQVQTCLKDEACLMYSWKKSADEIATLRECFPTRVLLGSITDPLVPFNTCQQRDITDDSSGSIYACLCNTDFCN----------------DDDSTPFGP---LEGGLGQTGGLTGVAGGSQDTIT------------------RTTTTRRPALPPPTTRAPARETTTRPPLINPPSR 671
BLAST of PREDICTED: collectin-12-like vs. nr
Match: gi|1325332331|ref|XP_023348018.1| (uncharacterized protein LOC111716763 isoform X3 [Eurytemora affinis]) HSP 1 Score: 108.997 bits (271), Expect = 5.352e-21 Identity = 68/207 (32.85%), Postives = 98/207 (47.34%), Query Frame = 0 Query: 264 PPTRDSRPPQSPSGGGGQLQCFSCGSLFNPDK-KCDKFDPSDPSLIQTCGPGEACLLYSWEKSTGERATARECFSTSILLGPINNQLLPLNGCQVRDISEPGASGVEACLCTTNLCNSRDGAVGAAVGPIQSAPIRNPPTQPPANINPVAVPQTVTTRRPSQNQIQGSQCPPKFKQLPTGCYFFAQE-RMGWIEAKKECEFMTPGTN 468 P SR +S G +LQC++CGSLFN D CD+FDP +P + TC GEACLLY+W KS E + RECF+TSILLG + + P C+ S + ACLCT + CN D + + P P R P+ P ++ + + + +K Y F +GW KK +++ G++ Sbjct: 145 PFDNSSRVSRSRVGKQTRLQCYTCGSLFNRDSPACDRFDPQNPGQLTTCNDGEACLLYTWRKSKTELGSYRECFTTSILLGHPDYPIRPAPTCKPTRTQRDERSSIRACLCTNDKCNILDEELDSVRAPRVIFPDRESPSCPSLSVGKADYADCNGEYEIVDDFVDWAPARFVYKHTSKDRYIFWNAGGLGWSIGKK--DYLKSGSH 349 HSP 2 Score: 81.6481 bits (200), Expect = 2.801e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 0 Query: 75 RVLCHQCGSLFSGSNNPDCTNFDASSEEFQGYCKPGESCLYYTWEKSVSETSIIRECITPSILLGPITNPLRASRTCDVRDISEFKSSSIMACICDTDKCNV 176 R+ C+ CGSLF+ ++P C FD + C GE+CL YTW KS +E REC T SILLG P+R + TC + SSI AC+C DKCN+ Sbjct: 162 RLQCYTCGSLFN-RDSPACDRFDPQNPGQLTTCNDGEACLLYTWRKSKTELGSYRECFTTSILLGHPDYPIRPAPTCKPTRTQRDERSSIRACLCTNDKCNI 262
BLAST of PREDICTED: collectin-12-like vs. nr
Match: gi|1325332327|ref|XP_023348016.1| (uncharacterized protein LOC111716763 isoform X1 [Eurytemora affinis]) HSP 1 Score: 109.383 bits (272), Expect = 6.448e-21 Identity = 68/207 (32.85%), Postives = 98/207 (47.34%), Query Frame = 0 Query: 264 PPTRDSRPPQSPSGGGGQLQCFSCGSLFNPDK-KCDKFDPSDPSLIQTCGPGEACLLYSWEKSTGERATARECFSTSILLGPINNQLLPLNGCQVRDISEPGASGVEACLCTTNLCNSRDGAVGAAVGPIQSAPIRNPPTQPPANINPVAVPQTVTTRRPSQNQIQGSQCPPKFKQLPTGCYFFAQE-RMGWIEAKKECEFMTPGTN 468 P SR +S G +LQC++CGSLFN D CD+FDP +P + TC GEACLLY+W KS E + RECF+TSILLG + + P C+ S + ACLCT + CN D + + P P R P+ P ++ + + + +K Y F +GW KK +++ G++ Sbjct: 145 PFDNSSRVSRSRVGKQTRLQCYTCGSLFNRDSPACDRFDPQNPGQLTTCNDGEACLLYTWRKSKTELGSYRECFTTSILLGHPDYPIRPAPTCKPTRTQRDERSSIRACLCTNDKCNILDEELDSVRAPRVIFPDRESPSCPSLSVGKADYADCNGEYEIVDDFVDWAPARFVYKHTSKDRYIFWNAGGLGWSIGKK--DYLKSGSH 349 HSP 2 Score: 81.6481 bits (200), Expect = 3.132e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 0 Query: 75 RVLCHQCGSLFSGSNNPDCTNFDASSEEFQGYCKPGESCLYYTWEKSVSETSIIRECITPSILLGPITNPLRASRTCDVRDISEFKSSSIMACICDTDKCNV 176 R+ C+ CGSLF+ ++P C FD + C GE+CL YTW KS +E REC T SILLG P+R + TC + SSI AC+C DKCN+ Sbjct: 162 RLQCYTCGSLFN-RDSPACDRFDPQNPGQLTTCNDGEACLLYTWRKSKTELGSYRECFTTSILLGHPDYPIRPAPTCKPTRTQRDERSSIRACLCTNDKCNI 262
BLAST of PREDICTED: collectin-12-like vs. nr
Match: gi|1325332335|ref|XP_023348020.1| (uncharacterized protein LOC111716763 isoform X5 [Eurytemora affinis]) HSP 1 Score: 108.612 bits (270), Expect = 6.496e-21 Identity = 68/207 (32.85%), Postives = 98/207 (47.34%), Query Frame = 0 Query: 264 PPTRDSRPPQSPSGGGGQLQCFSCGSLFNPDK-KCDKFDPSDPSLIQTCGPGEACLLYSWEKSTGERATARECFSTSILLGPINNQLLPLNGCQVRDISEPGASGVEACLCTTNLCNSRDGAVGAAVGPIQSAPIRNPPTQPPANINPVAVPQTVTTRRPSQNQIQGSQCPPKFKQLPTGCYFFAQE-RMGWIEAKKECEFMTPGTN 468 P SR +S G +LQC++CGSLFN D CD+FDP +P + TC GEACLLY+W KS E + RECF+TSILLG + + P C+ S + ACLCT + CN D + + P P R P+ P ++ + + + +K Y F +GW KK +++ G++ Sbjct: 145 PFDNSSRVSRSRVGKQTRLQCYTCGSLFNRDSPACDRFDPQNPGQLTTCNDGEACLLYTWRKSKTELGSYRECFTTSILLGHPDYPIRPAPTCKPTRTQRDERSSIRACLCTNDKCNILDEELDSVRAPRVIFPDRESPSCPSLSVGKADYADCNGEYEIVDDFVDWAPARFVYKHTSKDRYIFWNAGGLGWSIGKK--DYLKSGSH 349 HSP 2 Score: 81.2629 bits (199), Expect = 3.019e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 0 Query: 75 RVLCHQCGSLFSGSNNPDCTNFDASSEEFQGYCKPGESCLYYTWEKSVSETSIIRECITPSILLGPITNPLRASRTCDVRDISEFKSSSIMACICDTDKCNV 176 R+ C+ CGSLF+ ++P C FD + C GE+CL YTW KS +E REC T SILLG P+R + TC + SSI AC+C DKCN+ Sbjct: 162 RLQCYTCGSLFN-RDSPACDRFDPQNPGQLTTCNDGEACLLYTWRKSKTELGSYRECFTTSILLGHPDYPIRPAPTCKPTRTQRDERSSIRACLCTNDKCNI 262
BLAST of PREDICTED: collectin-12-like vs. nr
Match: gi|1325332339|ref|XP_023348022.1| (uncharacterized protein LOC111716763 isoform X7 [Eurytemora affinis]) HSP 1 Score: 108.227 bits (269), Expect = 7.545e-21 Identity = 68/207 (32.85%), Postives = 98/207 (47.34%), Query Frame = 0 Query: 264 PPTRDSRPPQSPSGGGGQLQCFSCGSLFNPDK-KCDKFDPSDPSLIQTCGPGEACLLYSWEKSTGERATARECFSTSILLGPINNQLLPLNGCQVRDISEPGASGVEACLCTTNLCNSRDGAVGAAVGPIQSAPIRNPPTQPPANINPVAVPQTVTTRRPSQNQIQGSQCPPKFKQLPTGCYFFAQE-RMGWIEAKKECEFMTPGTN 468 P SR +S G +LQC++CGSLFN D CD+FDP +P + TC GEACLLY+W KS E + RECF+TSILLG + + P C+ S + ACLCT + CN D + + P P R P+ P ++ + + + +K Y F +GW KK +++ G++ Sbjct: 145 PFDNSSRVSRSRVGKQTRLQCYTCGSLFNRDSPACDRFDPQNPGQLTTCNDGEACLLYTWRKSKTELGSYRECFTTSILLGHPDYPIRPAPTCKPTRTQRDERSSIRACLCTNDKCNILDEELDSVRAPRVIFPDRESPSCPSLSVGKADYADCNGEYEIVDDFVDWAPARFVYKHTSKDRYIFWNAGGLGWSIGKK--DYLKSGSH 349 HSP 2 Score: 80.8777 bits (198), Expect = 3.724e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 0 Query: 75 RVLCHQCGSLFSGSNNPDCTNFDASSEEFQGYCKPGESCLYYTWEKSVSETSIIRECITPSILLGPITNPLRASRTCDVRDISEFKSSSIMACICDTDKCNV 176 R+ C+ CGSLF+ ++P C FD + C GE+CL YTW KS +E REC T SILLG P+R + TC + SSI AC+C DKCN+ Sbjct: 162 RLQCYTCGSLFN-RDSPACDRFDPQNPGQLTTCNDGEACLLYTWRKSKTELGSYRECFTTSILLGHPDYPIRPAPTCKPTRTQRDERSSIRACLCTNDKCNI 262
BLAST of PREDICTED: collectin-12-like vs. nr
Match: gi|1325332333|ref|XP_023348019.1| (uncharacterized protein LOC111716763 isoform X4 [Eurytemora affinis]) HSP 1 Score: 103.605 bits (257), Expect = 3.467e-19 Identity = 68/207 (32.85%), Postives = 98/207 (47.34%), Query Frame = 0 Query: 264 PPTRDSRPPQSPSGGGGQLQCFSCGSLFNPDK-KCDKFDPSDPSLIQTCGPGEACLLYSWEKSTGERATARECFSTSILLGPINNQLLPLNGCQVRDISEPGASGVEACLCTTNLCNSRDGAVGAAVGPIQSAPIRNPPTQPPANINPVAVPQTVTTRRPSQNQIQGSQCPPKFKQLPTGCYFFAQE-RMGWIEAKKECEFMTPGTN 468 P SR +S G +LQC++CGSLFN D CD+FDP +P + TC GEACLLY+W KS E + RECF+TSILLG + + P C+ S + ACLCT + CN D + + P P R P+ P ++ + + + +K Y F +GW KK +++ G++ Sbjct: 145 PFDNSSRVSRSRVGKQTRLQCYTCGSLFNRDSPACDRFDPQNPGQLTTCNDGEACLLYTWRKSKTELGSYRECFTTSILLGHPDYPIRPAPTCKPTRTQRDERSSIRACLCTNDKCNILDEELDSVRAPRVIFPDRESPSCPSLSVGKADYADCNGEYEIVDDFVDWAPARFVYKHTSKDRYIFWNAGGLGWSIGKK--DYLKSGSH 349 HSP 2 Score: 78.1814 bits (191), Expect = 3.363e-11 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 0 Query: 75 RVLCHQCGSLFSGSNNPDCTNFDASSEEFQGYCKPGESCLYYTWEKSVSETSIIRECITPSILLGPITNPLRASRTCDVRDISEFKSSSIMACICDTDKCNV 176 R+ C+ CGSLF+ ++P C FD + C GE+CL YTW KS +E REC T SILLG P+R + TC + SSI AC+C DKCN+ Sbjct: 162 RLQCYTCGSLFN-RDSPACDRFDPQNPGQLTTCNDGEACLLYTWRKSKTELGSYRECFTTSILLGHPDYPIRPAPTCKPTRTQRDERSSIRACLCTNDKCNI 262
BLAST of PREDICTED: collectin-12-like vs. nr
Match: gi|1325332329|ref|XP_023348017.1| (uncharacterized protein LOC111716763 isoform X2 [Eurytemora affinis]) HSP 1 Score: 102.449 bits (254), Expect = 8.231e-19 Identity = 55/120 (45.83%), Postives = 70/120 (58.33%), Query Frame = 0 Query: 264 PPTRDSRPPQSPSGGGGQLQCFSCGSLFNPDK-KCDKFDPSDPSLIQTCGPGEACLLYSWEKSTGERATARECFSTSILLGPINNQLLPLNGCQVRDISEPGASGVEACLCTTNLCNSRD 382 P SR +S G +LQC++CGSLFN D CD+FDP +P + TC GEACLLY+W KS E + RECF+TSILLG + + P C+ S + ACLCT + CN D Sbjct: 145 PFDNSSRVSRSRVGKQTRLQCYTCGSLFNRDSPACDRFDPQNPGQLTTCNDGEACLLYTWRKSKTELGSYRECFTTSILLGHPDYPIRPAPTCKPTRTQRDERSSIRACLCTNDKCNILD 264 HSP 2 Score: 81.6481 bits (200), Expect = 3.418e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 0 Query: 75 RVLCHQCGSLFSGSNNPDCTNFDASSEEFQGYCKPGESCLYYTWEKSVSETSIIRECITPSILLGPITNPLRASRTCDVRDISEFKSSSIMACICDTDKCNV 176 R+ C+ CGSLF+ ++P C FD + C GE+CL YTW KS +E REC T SILLG P+R + TC + SSI AC+C DKCN+ Sbjct: 162 RLQCYTCGSLFN-RDSPACDRFDPQNPGQLTTCNDGEACLLYTWRKSKTELGSYRECFTTSILLGHPDYPIRPAPTCKPTRTQRDERSSIRACLCTNDKCNI 262
BLAST of PREDICTED: collectin-12-like vs. nr
Match: gi|348526262|ref|XP_003450639.1| (PREDICTED: C-type lectin domain family 4 member E [Oreochromis niloticus]) HSP 1 Score: 67.3958 bits (163), Expect = 1.468e-8 Identity = 27/83 (32.53%), Postives = 45/83 (54.22%), Query Frame = 0 Query: 428 QGSQCPPKFKQLPTGCYFFAQERMGWIEAKKECEFMTPGTNLVAIETPGERDALMSEISSFGRSRYEFWTAGNDIDREDEWVW 510 Q +CP + + CY+F+ +R+ W++++ CE M G++L + T + DAL E G Y +W +DI+ E EW W Sbjct: 115 QCRECPEGWLHIGNQCYYFSNDRLDWVKSRDSCEEM--GSHLTILHTVEQHDALAKEAKRIGGFYYHYWIGLSDIETEGEWRW 195
BLAST of PREDICTED: collectin-12-like vs. nr
Match: gi|1351466212|ref|XP_023932905.1| (uncharacterized protein LOC112042508 [Lingula anatina]) HSP 1 Score: 68.5514 bits (166), Expect = 2.204e-8 Identity = 34/98 (34.69%), Postives = 50/98 (51.02%), Query Frame = 0 Query: 423 SQNQIQGSQCPPKFKQLPTGCYFFAQERMGWIEAKKECEFMTPGTNLVAIETPGERDALMSEIS------SFGRSRYEFWTAGNDIDREDEWVWSGSR 514 SQ Q+ S CPP F T CY F + W+ A K C + NLV+IE+ E++ L + I + FWT+G D+D+E W+W G++ Sbjct: 259 SQPQVVFSPCPPGFTPFQTSCYVFELHQTDWVSANKMCRDLH-AANLVSIESQAEQNFLKNHIKRNKLKPEIPYKHWGFWTSGTDLDKEGVWIWHGTK 355
BLAST of PREDICTED: collectin-12-like vs. nr
Match: gi|554829308|ref|XP_005925251.1| (PREDICTED: C-type lectin domain family 4 member E-like [Haplochromis burtoni]) HSP 1 Score: 66.6254 bits (161), Expect = 2.638e-8 Identity = 27/83 (32.53%), Postives = 44/83 (53.01%), Query Frame = 0 Query: 428 QGSQCPPKFKQLPTGCYFFAQERMGWIEAKKECEFMTPGTNLVAIETPGERDALMSEISSFGRSRYEFWTAGNDIDREDEWVW 510 Q +CP + + CY+F+ +R+ W+ ++ CE M G++L + T + DAL E G Y +W +DI+ E EW W Sbjct: 115 QCRECPEGWLHIGNQCYYFSNDRLDWVRSRDSCEEM--GSHLTILHTIEQHDALEKEAKRIGGFYYHYWIGLSDIETEGEWKW 195 The following BLAST results are available for this feature:
BLAST of PREDICTED: collectin-12-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of PREDICTED: collectin-12-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 1
BLAST of PREDICTED: collectin-12-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold249_size238305:205031..227525+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold249_size238305-snap-gene-1.13 ID=maker-scaffold249_size238305-snap-gene-1.13|Name=PREDICTED: collectin-12-like|organism=Tigriopus kingsejongensis|type=gene|length=22495bp|location=Sequence derived from alignment at scaffold249_size238305:205031..227525+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'PREDICTED: collectin-12-like' has the following synonyms
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