hypothetical protein DAPPUDRAFT_261119, maker-scaffold1435_size41353-snap-gene-0.12 (gene) Tigriopus kingsejongensis

Overview
Namehypothetical protein DAPPUDRAFT_261119
Unique Namemaker-scaffold1435_size41353-snap-gene-0.12
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of hypothetical protein DAPPUDRAFT_261119 vs. L. salmonis genes
Match: EMLSAG00000002862 (supercontig:LSalAtl2s:LSalAtl2s16595:2:760:1 gene:EMLSAG00000002862 transcript:EMLSAT00000002862 description:"augustus-LSalAtl2s16595-processed-gene-0.0")

HSP 1 Score: 48.521 bits (114), Expect = 2.823e-7
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0 
Query:   20 GQKVWVQDPISKRWTKCAKI-VEMRNRRYLLRLLSSRFLWKNRKFIR 65
            G KVW+QDP SK W + A +  + ++R YLL L S R L +NR+FIR
Sbjct:  203 GSKVWIQDPTSKIWDRXATVQGKKQDREYLLLLPSGRTLCRNRRFIR 249
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BLAST of hypothetical protein DAPPUDRAFT_261119 vs. L. salmonis genes
Match: EMLSAG00000001303 (supercontig:LSalAtl2s:LSalAtl2s1217:105115:118735:1 gene:EMLSAG00000001303 transcript:EMLSAT00000001303 description:"snap_masked-LSalAtl2s1217-processed-gene-1.8")

HSP 1 Score: 47.3654 bits (111), Expect = 4.724e-7
Identity = 25/79 (31.65%), Postives = 41/79 (51.90%), Query Frame = 0 
Query:  113 MRDLLQIRQDEGQDYTSLCNDLRELANYADA---------------AMANEDDRAKVTEKSVSTFEEARLYILELETSR 176
            M+DLL I Q E QDY  LC+ + E  ++++                 M NE DR K+  + + +FE+ R +I++L  +R
Sbjct:    1 MKDLLSIPQSESQDYRDLCHKITERGDFSNTENITKDRRHICVFIKTMKNESDRRKLITEDLKSFEDPRKFIMKLGRAR 79
The following BLAST results are available for this feature:
BLAST of hypothetical protein DAPPUDRAFT_261119 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000028622.823e-751.06supercontig:LSalAtl2s:LSalAtl2s16595:2:760:1 gene:... [more]
EMLSAG000000013034.724e-731.65supercontig:LSalAtl2s:LSalAtl2s1217:105115:118735:... [more]
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BLAST of hypothetical protein DAPPUDRAFT_261119 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of hypothetical protein DAPPUDRAFT_261119 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1435_size41353supercontigscaffold1435_size41353:15213..16839 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1435_size41353-snap-gene-0.12-mRNA-1maker-scaffold1435_size41353-snap-gene-0.12-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1435_size41353:15213..16839-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1435_size41353-snap-gene-0.12 ID=maker-scaffold1435_size41353-snap-gene-0.12|Name=hypothetical protein DAPPUDRAFT_261119|organism=Tigriopus kingsejongensis|type=gene|length=1627bp|location=Sequence derived from alignment at scaffold1435_size41353:15213..16839- (Tigriopus kingsejongensis)
ATGTCTCCCGTGCTCACAAGAAGTGTTGGAACCGCTCTCACCGGATCAAT
TTACCCAGGTGGATATTCAGTACAATTTGACCTGAAAGAAAGAAAAGGGC
TGGCATGATCAAATTGGTCGACGCCTGGCTCCTCTACCTGTAGGACAGAA
GGTGTGGGTACAGGATCCAATAAGTAAACGATGGACAAAGTGCGCTAAAA
TTGTGGAAATGCGAAACCGACGATACCTCCTACGTCTTTTATCTAGTAGA
TTCTTGTGGAAGAATCGCAAATTCATTCGATCCCGATGTGACGACCTCAA
GGAGAAGAATGAACCATATAGTGTCAAGCCTCTGCCCTTGAGGGGAAGCA
GAAGAAACCAATACAAGACGCTGAAATGCACTCCGTGGTTTCGATCCCCT
TGTTGGGGGAGATGGAGTGGTTGAATATGTAGTACCCTAAAGCTCTGTCA
CCCCTGTTGCTTCTGAGGACGATCAGCGGACTTGCTCAGGGGGGTGGAGA
GATACGTGTCAATGCATGACGTGGCTGGTTGCCATTCTCCCGTGTCCTTT
TAAATAAAGTTATTCAACGTTAAGTGACCTGAACATTTATCCATGGCGCA
GTTGGTAGGATCCGAAACTACGCTCCCATAGGGATTCTGATTGTGACATG
TCTGTAGAACAGGAGATGGTGGTCCGGCTCAGGAAATCCCTGAGCCGATT
CAAAGCGCCAACAAGGCGGGTTCGGAAAGCGGTTCAAGATGCAATTTCAT
CGTTAGACCTGGAAACTGATCCATACTGTCTCATATCTCGCCTAAACCAC
TGGCAAACATGCTTAGATTAGCATGAGGATGCCGAAAATGCAGTCTTTTT
CCATGAAGGTTCAGATATGGCGGATTCGGACGGGACAGATCTCTCTGTGT
TTGAGAATGCATTCTTTGAAGCTGATGCCATAATCCATGGTTTACGCAAG
GATTTTGATGCTGCCAATGCCAGGGCAAGAAGGTTACCTGTCCTTGCTCC
TGCATCACAATCAGGCGAGCGCAATTTACCCAAATTCTCAGCAAAGCATA
ATTTGATCTTGGAAGAGAATATCGATTTGAACACTTTCCTTCAATGACGT
CCCGTGTGGTGGCTTTGTCTCAACGGGATCAATCGGTCCAGGTTTGGATG
CTGTGGGAATGCTGCTCTCCTGGATTCCCTTAGATTGTTCAGCATTCCTT
GACGATTTCTATGGACACCAGTCGAGAAGTTGATGATATCCTCAACATCA
TTCAAAGATATTTGCGAAGTTTGGGGAAAGTTTACATCGATATGCGCGAC
TTGTTGCAAATCCGTCAAGATGAAGGCCAAGATTACACGTCTCTGTGCAA
CGATCTTCGGGAATTGGCCAATTATGCTGATGCGGTGAATATTTCTGAGG
ATCACTTACTAATCTCACTTTTGCTTCAGGCTATGGCTAACGAGGATGAC
AGAGCAAAAGTGACAGAGAAGAGCGTCAGTACCTTTGAAGAGGCGCGGCT
GTACATCCTCGAGTTGGAAACGTCAAGGAATAGTGCAAAGTTGCTTTCCG
ACAAGGTCAATGAGATTGCCCGAGTTCAGTCAAATTACCAGAAGTCTAAG
ACACAACGATTCGCACCTGCAACTTGA
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Synonyms
The feature 'hypothetical protein DAPPUDRAFT_261119' has the following synonyms
Synonym
Tk10249
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