Tk03279, Tk03279 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03279
Unique NameTk03279
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length462
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000301TetraspaninPRINTSPR00259TMFOURcoord: 394..422
score: 15.55
coord: 367..393
score: 35.07
IPR018499Tetraspanin/PeripherinPFAMPF00335Tetraspannincoord: 331..461
e-value: 2.4E-14
score: 53.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..153
NoneNo IPR availablePANTHERPTHR19282:SF283TETRASPANINcoord: 331..443
NoneNo IPR availablePANTHERPTHR19282TETRASPANINcoord: 331..443
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 395..399
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 400..422
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 423..462
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..371
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 372..394
NoneNo IPR availableTMHMMTMhelixcoord: 372..394
NoneNo IPR availableTMHMMTMhelixcoord: 399..421

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold675_size187964-snap-gene-0.32-mRNA-1maker-scaffold675_size187964-snap-gene-0.32-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03279 ID=Tk03279|Name=Tk03279|organism=Tigriopus kingsejongensis|type=polypeptide|length=462bp
MARKHYFTHCHTLIPPRGGGFEWTELRPIRPNQDVLLPGVVIRGTGLDFQ
TKNRDRYRSRHGFSQTDGIAQYSGKFYPFQDHLRFKDTQFAPDHLELPKD
FLTPYCASHDLRTLSEHSFASSRPSLSSQSWRRDLNPRPRRRHVSAGQPE
LAKKMTFGGTFEAGAIEKDRPRSDQRFDRLRKRGRKWESCSCLSSLPSIG
GEGGLHHNEDLRLMFPPKSSSRSRYPSGQEFSSISLLSKDILSNEAQLRP
TSRESLQHAYSQLYRNQLPDALQSDILMDQQHICAKWSDVDSEAGKISEM
GEDLVKDSIDEVSKMLMKQATLDHTTKEKHLLGCLVLGFGIYALVNNGQN
DILIFDVDSSLYQNIHSNTAEIILVIVSGIIILVSFLGCCGAVLENRGVI
FVYFTIMLITTVITTIGSTLVFTKTIDDVTQPLLSSLQRYNPNSTDVGPI
QMTQVWDQVQSE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000301Tetraspanin
IPR018499Tetraspanin/Peripherin
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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