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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002159 | CD36 family | PRINTS | PR01609 | CD36FAMILY | coord: 144..163
score: 28.97
coord: 89..110
score: 35.27
coord: 440..464
score: 27.31
coord: 114..126
score: 56.5
coord: 487..508
score: 37.93 |
| IPR002159 | CD36 family | PFAM | PF01130 | CD36 | coord: 47..582
e-value: 2.5E-108
score: 362.5 |
| IPR002159 | CD36 family | PANTHER | PTHR11923 | SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1 | coord: 43..592 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 238..260 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 64..562 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 563..586 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 587..606 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 44..63 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..43 |
| None | No IPR available | TMHMM | TMhelix | | coord: 45..67 |
| None | No IPR available | TMHMM | TMhelix | | coord: 564..586 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk03740 ID=Tk03740|Name=Tk03740|organism=Tigriopus kingsejongensis|type=polypeptide|length=606bp
MSEGTQGTPKLGEESQAFITPKTKLVAPRNGCCHSKHTSRCCMATGVIGI
LFVILGIVVLLMGEGLLREKIVSSMALAEGSDRLQSWLHPPVQPHLTGYA
FHVTNPEAVLAGKKPILEERGPYVYTSTNVKDSDDNIQFHDDDTITYRLR
KLYHYVPELSGAGLDPERDFITIPNIPMWTGMNGLRSKTGIAKSIGEGLV
TSNGLGTPFINITFGGLLWGYQDELPCLKLDRPSECATGEESPFAASSGG
DDFGDDEGDDWDFKRRRKRSISEEEQSKWSKIESDPNSEWYGIAKPKAEF
VDCSCNWGLFRDRNVTMREPVRFFSGVGDLHMKGVVKEYNGKDHLGWWKP
GSVCDQAKGQDSSTLPPGITKNDKLDIFISLMCRGIVLEYEQDVNHAGIR
TLRFIPPKNALGAHDDPNPEFKNPDNECYCLEEEGFRCFKSGVLNMEPCK
RETNAPLALSMPHFYDADPYYGQMVGGLKPEKEKHQFYLDVMPEFGFPLA
IRPRFQLNILIGRYMSSTWEAIQGMQEELLVPFLWAQDGFDEPSEVMAEQ
LLFGLSAPKKVPMMGAVVCLLIGAVCLAACLGYFFWQRRTRASTKFTDEF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002159 | CD36_fam |
Vocabulary: Cellular Component
| Term | Definition |
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| GO:0016020 | membrane |
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