Tk03750, Tk03750 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03750
Unique NameTk03750
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length607
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 250..292
e-value: 0.0011
score: 28.3
coord: 154..197
e-value: 440.0
score: 0.3
coord: 297..334
e-value: 5.2
score: 12.5
coord: 201..239
e-value: 1.4
score: 16.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 254..292
e-value: 8.0E-5
score: 23.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 300..488
e-value: 1.4E-8
score: 36.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 144..299
e-value: 1.7E-13
score: 52.3
NoneNo IPR availablePANTHERPTHR14494ALADIN/ADRACALIN/AAAScoord: 91..494
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 279..293
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 259..343
score: 10.654
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 164..433

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold911_size81771-snap-gene-0.22-mRNA-1maker-scaffold911_size81771-snap-gene-0.22-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03750 ID=Tk03750|Name=Tk03750|organism=Tigriopus kingsejongensis|type=polypeptide|length=607bp
MASSSLWEFPPLSATPSARVCEYDSVLLGQAALFPPHALRGWAWLEALMP
DDRDSGGLGPSQAGSGLEQSFHLSLKHAFLPRSRERQLQVGHALAQWFDE
GLFSALESLTTTSEGRFTSFWAKGVESVARTLLALYRMTSNIHSSFNPHL
MLSGDDMIAKFSQNTDWFNSPVRALAWHPHVAKLAVVLRSDVIHISGRDL
PSSPVLKYKSQKGVACLAWRPLNGSELAVGCLTGLLVWNVDPLSVAAHPS
ASCVTILPTPPGHAPVTSLQWDPKGNLLLSSSAADTSMILWNTASETKIP
LRRVGGGGVHMVLWSPDASKVFAATPSTSFRVWDTIHQWTHERWNVLGGH
VNSACWSPCGQYLLFTTNEEPLMFCLNFHPVDGSSAAAVPVADLTNIEVE
VNHQIKTVGGLVQSMKWDPMGERLALSFQKSDVIALFATTLSPVLSLSPI
GLIQGLDGETPMVVEFAQQCNEGSLLTVAWSSGRLQHIPLFYVPAIDRNS
APLVINPDFEALSGFQGRLPSGHGIWGQFVGIGAFEAHNGFAQILAAGGL
IRIVELLVWTRTMSIKTWTGQATKDVLAVALAHFMARGDLGEDIAQLEAT
HTRENGP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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