Tk06364, Tk06364 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk06364
Unique NameTk06364
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length649
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02575560S ribosomal protein L4, C-terminal domainPFAMPF14374Ribos_L4_asso_Ccoord: 539..610
e-value: 8.1E-24
score: 83.4
IPR002136Ribosomal protein L4/L1ePFAMPF00573Ribosomal_L4coord: 72..264
e-value: 1.0E-22
score: 80.7
coord: 288..525
e-value: 1.4E-37
score: 129.2
IPR023574Ribosomal protein L4 domain superfamilyGENE3D3.40.1370.10coord: 268..568
e-value: 1.5E-137
score: 459.6
coord: 50..267
e-value: 4.4E-93
score: 313.6
IPR023574Ribosomal protein L4 domain superfamilySUPERFAMILY52166Ribosomal protein L4coord: 55..267
IPR023574Ribosomal protein L4 domain superfamilySUPERFAMILY52166Ribosomal protein L4coord: 271..526
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 619..649
NoneNo IPR availablePANTHERPTHR1943160S RIBOSOMAL PROTEIN L4coord: 51..267
coord: 267..625
NoneNo IPR availablePANTHERPTHR19431:SF060S RIBOSOMAL PROTEIN L4coord: 51..267
coord: 267..625

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold42_size484952-snap-gene-3.23-mRNA-1maker-scaffold42_size484952-snap-gene-3.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk06364 ID=Tk06364|Name=Tk06364|organism=Tigriopus kingsejongensis|type=polypeptide|length=649bp
GCAAHVAANSRIAEVSLSPSVRLTFPFHPPSLASERRKSSGSRTLVMSLS
AARPVITIYGEKNEPSGSTCSLPAVYQAPIRPDIVSMIHHEIAKNHRQAY
AVSQDAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAYGNMCRGGHMF
APTKTWRRWHRKVNVAQKRYAMCSAIAATGIPALVMAKGHRIENIPEVPL
VVSDKIQSYTKTKEAVILLRRLKAWTDIEQVYKTKRMRAGKGKMRNRRRI
QKLGPLVVYGSDQSLSAARPVITIYGEKNEPSGSTCSLPAVYQAPIRPDI
VSMIHHEIAKNHRQAYAVSQDAGHQTSAESWGTGRAVARIPRVRGGGTHR
SGQGAYGNMCRGGHMFAPTKTWRRWHRKVNVAQKRYAMCSAIAATGIPAL
VMAKGHRIENIPEVPLVVSDKIQSYTKTKEAVILLRRLKAWTDIEQVYKT
KRMRAGKGKMRNRRRIQKLGPLVVYGSDQGLTRAFRNIPGVDTICVDNLN
LLKLAPGGHVGRFCIWTESAFKKLDALYGTWRKASAEKKNWNLPQPKMAQ
TDLSRLLKSEEIRKILRAPNKKISKAVVKTNPLKNARTMVQLNPYSAVLK
KNAELLAAKRIREKAAVAAKKANKKPVANPMAKRTAAKAKKGGKAGKKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025755Ribos_L4_C_dom
IPR002136Ribosomal_L4/L1e
IPR023574Ribosomal_L4_dom_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
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