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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | PRINTS | PR00449 | RASTRNSFRMNG | coord: 56..78
score: 42.29
coord: 15..36
score: 40.42
coord: 38..54
score: 34.39
coord: 119..132
score: 45.26
coord: 154..176
score: 25.26 |
| None | No IPR available | SMART | SM00175 | rab_sub_5 | coord: 15..179
e-value: 1.4E-57
score: 207.3 |
| None | No IPR available | SMART | SM00176 | ran_sub_2 | coord: 20..224
e-value: 3.9E-8
score: 43.0 |
| None | No IPR available | SMART | SM00173 | ras_sub_4 | coord: 16..179
e-value: 4.8E-22
score: 89.2 |
| None | No IPR available | SMART | SM00174 | rho_sub_3 | coord: 17..179
e-value: 5.0E-11
score: 21.8 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 12..194
e-value: 1.3E-55
score: 189.7 |
| None | No IPR available | PANTHER | PTHR24073 | FAMILY NOT NAMED | coord: 10..187 |
| None | No IPR available | PANTHER | PTHR24073:SF209 | RAS-RELATED PROTEIN RAB-23 | coord: 10..187 |
| None | No IPR available | PROSITE | PS51419 | RAB | coord: 8..221
score: 27.931 |
| IPR005225 | Small GTP-binding protein domain | TIGRFAM | TIGR00231 | TIGR00231 | coord: 14..171
e-value: 6.0E-27
score: 92.4 |
| IPR001806 | Small GTPase superfamily | PFAM | PF00071 | Ras | coord: 16..175
e-value: 1.2E-49
score: 167.9 |
| IPR034114 | Ras-related protein Rab-23 | CDD | cd04106 | Rab23_like | coord: 15..176
e-value: 4.13398E-92
score: 268.156 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 12..184 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk06695 ID=Tk06695|Name=Tk06695|organism=Tigriopus kingsejongensis|type=polypeptide|length=298bp
MYITDFQDEDLEIAIKVVIVGNGAVGKSSMIQRYCRGVFTKGYKKTIGVD
FLEKPLRILSQDVRLMLWDTAGQEEFDAITKAYYRGAQACVVAFSTTDRA
SFEAVKKWRKKVEDECGGASIPTVLVQNKIDLMHQSAVTNEEVEALAREC
NMRVYRTSVKEDINICNVFQHLAENYVNQIRSTMFLNHRHLAGSNGLAHI
SHSTSLIQIGGLATRKHPFSSASLKLDANEKDMSPRLGRHNRFATPQEYL
SNPMFESLNKRSNHWLLSEKTITLKPLSTLKRKNVHKKLPIKSGCRVL back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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