Tk08684, Tk08684 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk08684
Unique NameTk08684
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length146
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000047Helix-turn-helix motifPRINTSPR00031HTHREPRESSRcoord: 67..76
score: 51.07
coord: 76..92
score: 57.8
IPR020479Homeobox domain, metazoaPRINTSPR00024HOMEOBOXcoord: 60..71
score: 37.5
coord: 85..94
score: 73.73
coord: 75..85
score: 51.41
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 38..100
e-value: 2.0E-23
score: 93.8
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 39..95
e-value: 2.1E-21
score: 75.4
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 36..96
score: 19.856
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 39..97
e-value: 1.34154E-18
score: 72.276
NoneNo IPR availableGENE3D1.10.10.60coord: 37..104
e-value: 6.2E-26
score: 91.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..146
NoneNo IPR availablePANTHERPTHR24340:SF35GTX/NKX6B-LIKE HOMEODOMAIN PROTEINcoord: 25..135
NoneNo IPR availablePANTHERPTHR24340FAMILY NOT NAMEDcoord: 25..135
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 71..94
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 26..96

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold483_size159862-processed-gene-0.9-mRNA-1snap_masked-scaffold483_size159862-processed-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk08684 ID=Tk08684|Name=Tk08684|organism=Tigriopus kingsejongensis|type=polypeptide|length=146bp
LREQTGLYWQNIHGLISTSNIWRNGFENHSVSELDSKKKHTRPTFSGQQI
FALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAE
MAHAKKRQEKSRGQTDPEGEGEDQYMGDDDDEDEDEDKFCTDIDNY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000047HTH_motif
IPR020479Homeobox_metazoa
IPR001356Homeobox_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
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