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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 161..184 score: 22.16 coord: 111..132 score: 22.17 coord: 74..96 score: 37.09 coord: 29..50 score: 32.34 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 11..183 e-value: 1.8E-34 score: 119.1 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PROSITE | PS00237 | G_PROTEIN_RECEP_F1_1 | coord: 80..96 |
None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 2..183 e-value: 2.5E-47 score: 163.8 |
None | No IPR available | PANTHER | PTHR43893 | FAMILY NOT NAMED | coord: 2..183 |
None | No IPR available | PANTHER | PTHR43893:SF14 | OCTOPAMINE RECEPTOR BETA-1R-RELATED | coord: 2..183 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 112..138 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..30 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 51..69 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 158..181 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 182..187 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 70..91 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 31..50 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 92..111 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 139..157 |
None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 2..183 |
None | No IPR available | TMHMM | TMhelix | | coord: 4..26 |
None | No IPR available | TMHMM | TMhelix | | coord: 31..53 |
None | No IPR available | TMHMM | TMhelix | | coord: 111..133 |
None | No IPR available | TMHMM | TMhelix | | coord: 159..181 |
None | No IPR available | TMHMM | TMhelix | | coord: 68..90 |
IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 11..187 score: 30.643 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk09545 ID=Tk09545|Name=Tk09545|organism=Tigriopus kingsejongensis|type=polypeptide|length=187bp LGFVTLCTILGNGFIIVCIASHRVLQRPSHIFIASLASTDLLLALTVMTP RLISELLDKWIFGFRLCQTYHAMDVTLCTVSILHLSCISLDRYYAIVNQP LRYYQRITPNRVVLMIVLCWILSILTGFVPVFTEIYTLPEYLELSKANPD ICDLRVNAYFSVLAGAVSFWVPGSIMVFVYYQVSPNN back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Biological Process
Term | Definition |
GO:0007186 | G-protein coupled receptor signaling pathway |
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