Tk09890, Tk09890 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09890
Unique NameTk09890
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length645
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000795Transcription factor, GTP-binding domainPRINTSPR00315ELONGATNFCTcoord: 61..69
score: 65.24
coord: 17..30
score: 73.94
coord: 97..108
score: 66.17
coord: 134..143
score: 56.52
coord: 81..91
score: 63.79
IPR000795Transcription factor, GTP-binding domainPFAMPF00009GTP_EFTUcoord: 13..204
e-value: 3.7E-59
score: 199.5
coord: 353..506
e-value: 3.0E-46
score: 157.3
IPR000795Transcription factor, GTP-binding domainPROSITEPS51722G_TR_2coord: 13..207
score: 61.382
IPR000795Transcription factor, GTP-binding domainPROSITEPS51722G_TR_2coord: 356..509
score: 45.624
NoneNo IPR availableGENE3D2.40.30.10coord: 606..645
e-value: 7.3E-16
score: 60.3
NoneNo IPR availableGENE3D2.40.30.10coord: 304..365
e-value: 2.0E-16
score: 61.8
NoneNo IPR availableGENE3D2.40.30.10coord: 209..303
e-value: 4.4E-36
score: 124.9
coord: 511..605
e-value: 4.4E-36
score: 124.9
NoneNo IPR availableGENE3D3.40.50.300coord: 4..206
e-value: 3.9E-71
score: 240.6
NoneNo IPR availableGENE3D3.40.50.300coord: 366..508
e-value: 4.3E-50
score: 171.0
NoneNo IPR availablePANTHERPTHR43721:SF15ELONGATION FACTOR TU 1-RELATEDcoord: 344..645
NoneNo IPR availablePANTHERPTHR43721:SF15ELONGATION FACTOR TU 1-RELATEDcoord: 5..343
NoneNo IPR availablePANTHERPTHR43721FAMILY NOT NAMEDcoord: 344..645
coord: 5..343
NoneNo IPR availableCDDcd01884EF_Tucoord: 14..206
e-value: 5.85985E-126
score: 368.064
IPR004160Translation elongation factor EFTu/EF1A, C-terminalPFAMPF03143GTP_EFTU_D3coord: 301..353
e-value: 4.5E-14
score: 52.6
coord: 603..645
e-value: 4.8E-13
score: 49.3
IPR004161Translation elongation factor EFTu-like, domain 2PFAMPF03144GTP_EFTU_D2coord: 530..598
e-value: 2.5E-15
score: 56.5
coord: 228..296
e-value: 2.5E-15
score: 56.5
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 16..150
e-value: 1.1E-14
score: 52.5
IPR004541Translation elongation factor EFTu/EF1A, bacterial/organelleTIGRFAMTIGR00485TIGR00485coord: 5..344
e-value: 8.1E-200
score: 661.5
coord: 345..645
e-value: 5.3E-177
score: 586.4
IPR004541Translation elongation factor EFTu/EF1A, bacterial/organelleHAMAPMF_00118_BEF_Tu_Bcoord: 4..410
score: 52.505
IPR031157Tr-type G domain, conserved sitePROSITEPS00301G_TR_1coord: 356..371
IPR031157Tr-type G domain, conserved sitePROSITEPS00301G_TR_1coord: 54..69
IPR033720Elongation factor Tu, domain 2CDDcd03697EFTU_IIcoord: 516..602
e-value: 1.19493E-51
score: 170.777
IPR033720Elongation factor Tu, domain 2CDDcd03697EFTU_IIcoord: 214..300
e-value: 1.19493E-51
score: 170.777
IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalSUPERFAMILY50465EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domaincoord: 603..645
IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalSUPERFAMILY50465EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domaincoord: 301..345
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 208..304
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 510..606
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..229
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 345..531

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold8_size885657-snap-gene-7.1-mRNA-1maker-scaffold8_size885657-snap-gene-7.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09890 ID=Tk09890|Name=Tk09890|organism=Tigriopus kingsejongensis|type=polypeptide|length=645bp
DIVVSKEKFQRGKPHVNVGTIGHVDHGKTTLTAAMTKVLSAKFGGNASAF
DEIDNAPEEKERGITISSSHVEYETAARHYAHVDCPGHADYVKNMITGAA
QMDGAILVVSAADGPMPQTREHILLARQVGVPYIIVFLNKADMVDDEELL
ELVEMEVRELLDMYEFPGDDTPIIHGSALKALEGDESYEEKILELANALD
TYIPEPERAIDGDFLMPVEDVFSISGRGTVATGRIERGVVLVGAEIEIVG
IKATVKTTVTGVEMFRKLLDRGEAGDNVGILLRGTKREDIERGQVLAKPG
SINPHTKFEAELYVLSKEEGGRHTPFFNGYRPQFYFRTTDVTAKFGGNAS
AFDEIDNAPEEKERGITISSSHVEYETAARHYAHVDCPGHADYVKNMITG
AAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIIVFLNKADMVDDEE
LLELVEMEVRELLDMYEFPGDDTPIIHGSALKALEGDESYEEKILELANA
LDTYIPEPERAIDGDFLMPVEDVFSISGRGTVATGRIERGVVLVGAEIEI
VGIKATVKTTVTGVEMFRKLLDRGEAGDNVGILLRGTKREDIERGQVLAK
PGSINPHTKFEAELYVLSKEEGGRHTPFFNGYRPQFYFRTTDVTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795TF_GTP-bd_dom
IPR004160Transl_elong_EFTu/EF1A_C
IPR004161EFTu-like_2
IPR005225Small_GTP-bd_dom
IPR004541Transl_elong_EFTu/EF1A_bac/org
IPR031157G_TR_CS
IPR033720EFTU_2
IPR009001Transl_elong_EF1A/Init_IF2_C
IPR009000Transl_B-barrel_sf
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0003746translation elongation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
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