Tk12429, Tk12429 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12429
Unique NameTk12429
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length610
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 546..606
e-value: 1.0E-170
score: 571.4
coord: 52..88
e-value: 1.0E-170
score: 571.4
coord: 130..179
e-value: 1.0E-170
score: 571.4
coord: 249..339
e-value: 1.0E-170
score: 571.4
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 549..608
coord: 48..339
IPR007867Glucose-methanol-choline oxidoreductase, C-terminalPFAMPF05199GMC_oxred_Ccoord: 458..602
e-value: 2.3E-38
score: 131.9
NoneNo IPR availableGENE3D3.30.560.10coord: 340..545
e-value: 1.0E-170
score: 571.4
coord: 89..129
e-value: 1.0E-170
score: 571.4
coord: 180..248
e-value: 1.0E-170
score: 571.4
NoneNo IPR availablePANTHERPTHR11552GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASEcoord: 49..607
NoneNo IPR availablePANTHERPTHR11552:SF154SUBFAMILY NOT NAMEDcoord: 49..607
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..610
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 387..550
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR012132Glucose-methanol-choline oxidoreductasePIRSFPIRSF000137Alcohol_oxidasecoord: 28..610
e-value: 3.6E-147
score: 489.6
IPR000172Glucose-methanol-choline oxidoreductase, N-terminalPFAMPF00732GMC_oxred_Ncoord: 52..346
e-value: 1.5E-82
score: 277.2
IPR000172Glucose-methanol-choline oxidoreductase, N-terminalPROSITEPS00623GMC_OXRED_1coord: 131..154

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold924_size80766-processed-gene-0.4-mRNA-1snap_masked-scaffold924_size80766-processed-gene-0.4-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12429 ID=Tk12429|Name=Tk12429|organism=Tigriopus kingsejongensis|type=polypeptide|length=610bp
MTTFTGPLGLVVGPAGALVVFLGLLIPFLKTELDDPVGIPQYDFWNPIQR
SYDYIVVGGGSSGAVVASRLSENPRISVLLIEAGSDGTVISNVPALVGTL
YGTDLDWNYKSKARGTACLGMKNTQCSWHRGRVIGGTSVINGMLYTRGNK
ADFDHWASLGNYGWSYEDVLPFFRKSEDQQNPYLAQDARHHGVGGPLPVS
DLRYETPLAEAFLKSAKLMGFQTGDIHGKNPFRFTKVQSTTKEGMRFSSA
RAFLSRAKHRPNLRILLNARVTKVIIKHKRAIGVRFINHNQSNFVRAKKE
VILSSGGVETPKLLMLSGIGPKYQLRRKGIRVIKNLPVGQNLQCHIGIGE
LVFTVEQPVSLNVIRLFLNPKSLFQYLTQTKGPFASLSGVEALGFVKSGL
SNGTSWPDLEILLLAFQPSIEGGLSYRNTINLSDKQFSQFRDITFQDGYT
LLPYLLHPRSRGQILLRDRNPKSSPIIIPNYYQDPHDVQTLIRGIKLALR
LGSSKPFRKFGAKFHAVPNPFCTKFTYMSDPYWECAMKHMTYNVYHDGGT
CRMGPKGHPKAVVDPKLRVQGIQALRVADASIMPELTSGHTNAPCIMIGE
KAAHMILHED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR007867GMC_OxRtase_C
IPR012132GMC_OxRdtase
IPR000172GMC_OxRdtase_N
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
GO:0050660flavin adenine dinucleotide binding
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