EMLSAG00000001660, EMLSAG00000001660-684426 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001660 vs. GO
Match: - (symbol:LOC100858751 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0002925 "positive regulation of humoral immune response mediated by circulating immunoglobulin" evidence=IEA] [GO:0009897 "external side of plasma membrane" evidence=IEA] [GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0051000 "positive regulation of nitric-oxide synthase activity" evidence=IEA] [GO:0051712 "positive regulation of killing of cells of other organism" evidence=IEA] [GO:0051770 "positive regulation of nitric-oxide synthase biosynthetic process" evidence=IEA] InterPro:IPR001304 Pfam:PF00059 PROSITE:PS50041 SMART:SM00034 GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 InterPro:IPR018378 PROSITE:PS00615 GeneTree:ENSGT00740000115170 KO:K06468 RefSeq:XP_003643419.1 Ensembl:ENSGALT00000044746 GeneID:100858751 KEGG:gga:100858751 Uniprot:R4GIY9) HSP 1 Score: 48.521 bits (114), Expect = 3.766e-6 Identity = 31/116 (26.72%), Postives = 53/116 (45.69%), Query Frame = 0 Query: 32 CPINFFYYPKTGLCYYKDTFTDTYVNAKEICGRMFGNRKGIFLASIQDETLRRTFFENKRFFLGITDIKQEGHFVWENGKVF--------EGHYPWDDFLDCGYYSPETGWGLFTC 139 CP + + KT CYY T ++V A+ C M G + I + ++++ L E + F+LG++D+++EG + W +G+ E + DC S W TC Sbjct: 196 CPAGWQQFDKT--CYYFSTEGKSWVEARAACS-MLGAQLAIINSELENKFLANHIMEIRAFWLGLSDMQREGDWEWLDGQSLSISFWRKGEPNNVGQHGEDCATISSSGLWNDVTC 308
BLAST of EMLSAG00000001660 vs. C. finmarchicus
Match: gi|592833078|gb|GAXK01124466.1| (TSA: Calanus finmarchicus comp24824_c0_seq1 transcribed RNA sequence) HSP 1 Score: 39.6614 bits (91), Expect = 1.251e-3 Identity = 30/109 (27.52%), Postives = 45/109 (41.28%), Query Frame = 0 Query: 45 CYYKDTFTDTYVNAKEICGRMFGNRKGIFLASIQDETLRRTFFE---NKRFFLGITDIKQEGHFVWENGKVFEGHYPWDDF-----------LDCGYYSPETGWGLFTC 139 CY Y++A C M G LAS++ E + F + +LG+TD EG F W +G VF+ +++F C + P+ GW TC Sbjct: 166 CYMVQAGPVNYLDALTSCISM-----GAELASLESEAEQNAVFALTGSTGAWLGLTDFLDEGVFSWVDGAVFDSATSYNNFRPNQPNNGNINQHCVWIRPDGGWDDVTC 477
BLAST of EMLSAG00000001660 vs. C. finmarchicus
Match: gi|592833077|gb|GAXK01124467.1| (TSA: Calanus finmarchicus comp24824_c0_seq2 transcribed RNA sequence) HSP 1 Score: 39.2762 bits (90), Expect = 1.551e-3 Identity = 30/109 (27.52%), Postives = 45/109 (41.28%), Query Frame = 0 Query: 45 CYYKDTFTDTYVNAKEICGRMFGNRKGIFLASIQDETLRRTFFE---NKRFFLGITDIKQEGHFVWENGKVFEGHYPWDDF-----------LDCGYYSPETGWGLFTC 139 CY Y++A C M G LAS++ E + F + +LG+TD EG F W +G VF+ +++F C + P+ GW TC Sbjct: 166 CYMVQAGPVNYLDALTSCISM-----GAELASLESEAEQNAVFALTGSTGAWLGLTDFLDEGVFSWVDGAVFDSATSYNNFRPNQPNNGNINQHCVWIRPDGGWDDVTC 477
BLAST of EMLSAG00000001660 vs. C. finmarchicus
Match: gi|592833074|gb|GAXK01124470.1| (TSA: Calanus finmarchicus comp24824_c1_seq2 transcribed RNA sequence) HSP 1 Score: 38.5058 bits (88), Expect = 2.199e-3 Identity = 29/109 (26.61%), Postives = 45/109 (41.28%), Query Frame = 0 Query: 45 CYYKDTFTDTYVNAKEICGRMFGNRKGIFLASIQDETLRRTFFE---NKRFFLGITDIKQEGHFVWENGKVFEGHYPWDDF-----------LDCGYYSPETGWGLFTC 139 CY Y++A C M G LAS++ E + F + +LG+TD EG F W +G VF+ ++++ C + P+ GW TC Sbjct: 20 CYMVQAGPVNYLDALTSCISM-----GAELASLESEAEQNAVFALTGSTGAWLGLTDFLDEGVFSWVDGAVFDSATSYNNWRPNQPNNGNNNQHCVWIRPDGGWDDVTC 331
BLAST of EMLSAG00000001660 vs. C. finmarchicus
Match: gi|592782664|gb|GAXK01171904.1| (TSA: Calanus finmarchicus comp62467_c4_seq11 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 2.215e-3 Identity = 24/88 (27.27%), Postives = 41/88 (46.59%), Query Frame = 0 Query: 30 GVCPINFFYYPKTGLCYYKDTFTD---TYVNAKEICGRMFG-------NRKGIFLASIQDETLRRTFFENKRFFLGITDIKQEGHFVW 107 G CP +F G Y+ ++ D ++V A + C M G + F+ASI ++ + ++LG+TD+ EG +VW Sbjct: 625 GTCPDGWFNADYLGCFYFDNSKPDRRLSWVEAMDACDNMGGYLAEVHTEEQAEFIASIA--SIEESLTGVDSWWLGLTDMGHEGRWVW 882
BLAST of EMLSAG00000001660 vs. C. finmarchicus
Match: gi|592782666|gb|GAXK01171902.1| (TSA: Calanus finmarchicus comp62467_c4_seq9 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 2.339e-3 Identity = 24/88 (27.27%), Postives = 41/88 (46.59%), Query Frame = 0 Query: 30 GVCPINFFYYPKTGLCYYKDTFTD---TYVNAKEICGRMFG-------NRKGIFLASIQDETLRRTFFENKRFFLGITDIKQEGHFVW 107 G CP +F G Y+ ++ D ++V A + C M G + F+ASI ++ + ++LG+TD+ EG +VW Sbjct: 681 GTCPDGWFNADYLGCFYFDNSKPDRRLSWVEAMDACDNMGGYLAEVHTEEQAEFIASIA--SIEESLTGVDSWWLGLTDMGHEGRWVW 938
BLAST of EMLSAG00000001660 vs. C. finmarchicus
Match: gi|592782671|gb|GAXK01171897.1| (TSA: Calanus finmarchicus comp62467_c4_seq4 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 2.561e-3 Identity = 24/88 (27.27%), Postives = 41/88 (46.59%), Query Frame = 0 Query: 30 GVCPINFFYYPKTGLCYYKDTFTD---TYVNAKEICGRMFG-------NRKGIFLASIQDETLRRTFFENKRFFLGITDIKQEGHFVW 107 G CP +F G Y+ ++ D ++V A + C M G + F+ASI ++ + ++LG+TD+ EG +VW Sbjct: 625 GTCPDGWFNADYLGCFYFDNSKPDRRLSWVEAMDACDNMGGYLAEVHTEEQAEFIASIA--SIEESLTGVDSWWLGLTDMGHEGRWVW 882
BLAST of EMLSAG00000001660 vs. C. finmarchicus
Match: gi|592782672|gb|GAXK01171896.1| (TSA: Calanus finmarchicus comp62467_c4_seq3 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 2.667e-3 Identity = 24/88 (27.27%), Postives = 41/88 (46.59%), Query Frame = 0 Query: 30 GVCPINFFYYPKTGLCYYKDTFTD---TYVNAKEICGRMFG-------NRKGIFLASIQDETLRRTFFENKRFFLGITDIKQEGHFVW 107 G CP +F G Y+ ++ D ++V A + C M G + F+ASI ++ + ++LG+TD+ EG +VW Sbjct: 681 GTCPDGWFNADYLGCFYFDNSKPDRRLSWVEAMDACDNMGGYLAEVHTEEQAEFIASIA--SIEESLTGVDSWWLGLTDMGHEGRWVW 938
BLAST of EMLSAG00000001660 vs. C. finmarchicus
Match: gi|592782668|gb|GAXK01171900.1| (TSA: Calanus finmarchicus comp62467_c4_seq7 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 1.176e-2 Identity = 23/90 (25.56%), Postives = 43/90 (47.78%), Query Frame = 0 Query: 30 GVCPINFFYYPKTGLCYYKDTFTD---TYVNAKEICGRMFG-------NRKGIFLASIQDETLRRTFFENKRFFLGITDIKQEGHFVWEN 109 G CP +F G Y+ ++ D ++V A++ C + G + F+ASI + + ++LG+TD+ EG ++WE+ Sbjct: 696 GTCPDGWFNADYLGCFYFDNSKPDRHLSWVEAQDRCDSLGGYLAEIVTEEQADFIASIA--LVEESLTGVGSWWLGLTDMGHEGRWIWEH 959
BLAST of EMLSAG00000001660 vs. C. finmarchicus
Match: gi|592782670|gb|GAXK01171898.1| (TSA: Calanus finmarchicus comp62467_c4_seq5 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 1.179e-2 Identity = 23/91 (25.27%), Postives = 43/91 (47.25%), Query Frame = 0 Query: 30 GVCPINFFYYPKTGLCYYKDTFTD---TYVNAKEICGRMFG-------NRKGIFLASIQDETLRRTFFENKRFFLGITDIKQEGHFVWENG 110 G CP +F G Y+ ++ D ++V A++ C + G + F+ASI + + ++LG+TD+ EG ++WE+ Sbjct: 592 GTCPDGWFNADYLGCFYFDNSKPDRHLSWVEAQDRCDSLGGYLAEIVTEEQADFIASIA--LVEESLTGVGSWWLGLTDMGHEGRWIWEHS 858
BLAST of EMLSAG00000001660 vs. C. finmarchicus
Match: gi|592782674|gb|GAXK01171894.1| (TSA: Calanus finmarchicus comp62467_c4_seq1 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 1.214e-2 Identity = 23/91 (25.27%), Postives = 43/91 (47.25%), Query Frame = 0 Query: 30 GVCPINFFYYPKTGLCYYKDTFTD---TYVNAKEICGRMFG-------NRKGIFLASIQDETLRRTFFENKRFFLGITDIKQEGHFVWENG 110 G CP +F G Y+ ++ D ++V A++ C + G + F+ASI + + ++LG+TD+ EG ++WE+ Sbjct: 693 GTCPDGWFNADYLGCFYFDNSKPDRHLSWVEAQDRCDSLGGYLAEIVTEEQADFIASIA--LVEESLTGVGSWWLGLTDMGHEGRWIWEHS 959
BLAST of EMLSAG00000001660 vs. L. salmonis peptides
Match: EMLSAP00000001660 (pep:novel supercontig:LSalAtl2s:LSalAtl2s128:1949583:1952351:1 gene:EMLSAG00000001660 transcript:EMLSAT00000001660 description:"maker-LSalAtl2s128-snap-gene-19.22") HSP 1 Score: 295.434 bits (755), Expect = 1.232e-103 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 Query: 1 MILFILPCVFFFTSIEGIPLFPDSNIQYYGVCPINFFYYPKTGLCYYKDTFTDTYVNAKEICGRMFGNRKGIFLASIQDETLRRTFFENKRFFLGITDIKQEGHFVWENGKVFEGHYPWDDFLDCGYYSPETGWGLFTCDNKK 143 MILFILPCVFFFTSIEGIPLFPDSNIQYYGVCPINFFYYPKTGLCYYKDTFTDTYVNAKEICGRMFGNRKGIFLASIQDETLRRTFFENKRFFLGITDIKQEGHFVWENGKVFEGHYPWDDFLDCGYYSPETGWGLFTCDNKK Sbjct: 1 MILFILPCVFFFTSIEGIPLFPDSNIQYYGVCPINFFYYPKTGLCYYKDTFTDTYVNAKEICGRMFGNRKGIFLASIQDETLRRTFFENKRFFLGITDIKQEGHFVWENGKVFEGHYPWDDFLDCGYYSPETGWGLFTCDNKK 143
BLAST of EMLSAG00000001660 vs. L. salmonis peptides
Match: EMLSAP00000003192 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1772:27086:31511:1 gene:EMLSAG00000003192 transcript:EMLSAT00000003192 description:"maker-LSalAtl2s1772-augustus-gene-0.8") HSP 1 Score: 62.003 bits (149), Expect = 1.920e-12 Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 0 Query: 14 SIEGIPLFPDSNIQYYGVCPINFFYYPKTGLCYYKDTFTDTYVNAKEICGRMFGNRKGIFLASIQDETLR 83 I G+ FP++ ++Y +CP +FFYY KT LCYYK T Y + ++ C MF R G+ AS+QD+ LR Sbjct: 23 QIGGVVEFPNTIVKYKELCPFHFFYYEKTKLCYYKSTTPKEYEDTQKTCQTMFPLR-GVSNASLQDDNLR 91
BLAST of EMLSAG00000001660 vs. L. salmonis peptides
Match: EMLSAP00000001661 (pep:novel supercontig:LSalAtl2s:LSalAtl2s128:1952833:1965919:1 gene:EMLSAG00000001661 transcript:EMLSAT00000001661 description:"snap_masked-LSalAtl2s128-processed-gene-19.10") HSP 1 Score: 56.6102 bits (135), Expect = 3.153e-10 Identity = 31/105 (29.52%), Postives = 54/105 (51.43%), Query Frame = 0 Query: 13 TSIEGIPLFPDSNIQYYGVCPINFFYYPKTGLCYYKDTFTDTYVNAKEICGRMFGNRKGIFLASIQDETLRRTF---FENKRFFLGITDIKQEGHFVWENGKVFE 114 T + G P +++ C ++ Y+ ++ CY+ TY A++ C + +G LAS+ E L + +K FF+G++D+K G +VWENGK +E Sbjct: 341 TKLYGCETEPSLIVEHQDFCLPDYLYFQESNXCYHISEQNRTYEEARKYC-KSRNPIRGSSLASVNKEDLIKIVSNKLGSKEFFIGLSDLKTRGEYVWENGKDYE 444 HSP 2 Score: 49.6766 bits (117), Expect = 5.393e-8 Identity = 31/118 (26.27%), Postives = 57/118 (48.31%), Query Frame = 0 Query: 31 VCPINFFYYPKTGLCYYKDTFTDTYVNAKEICGRMFGNRKGIFLASIQDETLRRTFFENK---RFFLGITDIKQEGHFVWENGKVFEGHY--PWDDFLDCGYYSPETGWGLFTCDNKK 143 +CP N++ +P C+Y Y +A+ C ++ LASI D ++ + E++ + G+ D+ EG+ W+ G ++ + W+D DC YY+ + +GL C K Sbjct: 227 ICPANYYKFPNVSSCFYLSNDWLNYTDARNSCPYTAPSKFNSRLASITDTSV-QALIEDQFPLPIYFGLNDLSHEGYPEWDLGDPYDKNQVSHWNDTYDCVYYNGK-NYGLDQCKETK 342
BLAST of EMLSAG00000001660 vs. SwissProt
Match: gi|1730116|sp|P07439.2|LEC3_MEGRO (RecName: Full=Lectin BRA-3; Flags: Precursor) HSP 1 Score: 53.1434 bits (126), Expect = 1.895e-8 Identity = 28/88 (31.82%), Postives = 44/88 (50.00%), Query Frame = 0 Query: 31 VCPINFFYYPKTGLCYYKDTFTDTYVNAKEICGRMFGNRKGIFLASIQDETLRRTFFE----NKRFFLGITDIKQEGHFVWENGKVFE 114 CP N + G CY+ T+ + +A+ C + G +LA+IQ + L F N R ++G+ DI EGH+VW NG+ + Sbjct: 25 TCPGNLDWQEYDGHCYWASTYQVRWNDAQLACQTV---HPGAYLATIQSQ-LENAFISETVSNNRLWIGLNDIDLEGHYVWSNGEATD 108
BLAST of EMLSAG00000001660 vs. nr
Match: gi|1126228331|ref|XP_019614001.1| (PREDICTED: collectin-10-like [Branchiostoma belcheri]) HSP 1 Score: 56.225 bits (134), Expect = 2.908e-7 Identity = 35/113 (30.97%), Postives = 47/113 (41.59%), Query Frame = 0 Query: 31 VCPINFFYYPKTGLCYYKDTFTDTYVNAKEICGRMFGNRKGIFLASIQDE-------TLRRTFFENKRFFLGITDIKQEGHFVWENGKVFEGHYPWDD--------FLDCGYY 128 CP + Y+ LCY Y A+ C + G LA +D L+ + + FF G+TDI+QEG +VWE+G G PWD DCG Y Sbjct: 19 ACPSGYTYHQTNRLCYKAYGLERDYSGARATC-----SSDGGTLAMPRDAVTNTILINLKNSVDNSAHFFFGLTDIRQEGRWVWEDGAALGGFRPWDQGEPDNRKGNQDCGEY 126 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001660 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 1
BLAST of EMLSAG00000001660 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000001660 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000001660 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 1
BLAST of EMLSAG00000001660 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001660 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000001660 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s128:1949583..1952351+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001660-684426 ID=EMLSAG00000001660-684426|Name=EMLSAG00000001660|organism=Lepeophtheirus salmonis|type=gene|length=2769bp|location=Sequence derived from alignment at LSalAtl2s128:1949583..1952351+ (Lepeophtheirus salmonis)back to top Add to Basket
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