EMLSAG00000001798, EMLSAG00000001798-684564 (gene) Lepeophtheirus salmonis
|
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001798 vs. GO
Match: - (symbol:CG2789 species:7227 "Drosophila melanogaster" [GO:0008503 "benzodiazepine receptor activity" evidence=ISS] [GO:0005740 "mitochondrial envelope" evidence=ISS] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0016021 EMBL:AE014134 OrthoDB:EOG7V7687 PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 eggNOG:COG3476 KO:K05770 EMBL:AY058269 RefSeq:NP_608531.1 UniGene:Dm.4332 IntAct:Q9VPR1 STRING:7227.FBpp0077726 EnsemblMetazoa:FBtr0078066 GeneID:33231 KEGG:dme:Dmel_CG2789 UCSC:CG2789-RA FlyBase:FBgn0031263 InParanoid:Q9VPR1 OMA:WAAQIAL GenomeRNAi:33231 NextBio:782568 PRO:PR:Q9VPR1 Uniprot:Q9VPR1) HSP 1 Score: 72.7886 bits (177), Expect = 1.278e-15 Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQIT 69
P+ +PP +FAP+W LY MG+ +YLV+R GG A +PL+ Y QL LNW+W+P++FG I
Sbjct: 45 PSFKPPNSVFAPMWISLYAGMGYGSYLVWRDGGGFAGEAAKLPLIAYGTQLALNWAWTPIFFGQHNIK 112
BLAST of EMLSAG00000001798 vs. GO
Match: - (symbol:TSPO "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0016021 GO:GO:0005739 OrthoDB:EOG7V7687 TreeFam:TF342852 PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 CTD:706 KO:K05770 OMA:ATTLNYC EMBL:AADN03001551 RefSeq:NP_001264986.1 UniGene:Gga.6122 Ensembl:ENSGALT00000022911 GeneID:418226 KEGG:gga:418226 Uniprot:F1NZA2) HSP 1 Score: 69.3218 bits (168), Expect = 1.777e-14 Identity = 32/67 (47.76%), Postives = 46/67 (68.66%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ PP W+FAPVW LY SMG+ +YLV++ G A++PL LY QL LNW+W+P++FG ++
Sbjct: 42 PSWCPPNWVFAPVWGTLYTSMGYGSYLVWKELGG-FTEKAAVPLGLYAGQLALNWAWTPIFFGAHKM 107
BLAST of EMLSAG00000001798 vs. GO
Match: - (symbol:TSPO "Putative peripheral benzodiazepine receptor-related protein" species:9606 "Homo sapiens" [GO:0005497 "androgen binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005741 "mitochondrial outer membrane" evidence=IEA] [GO:0006694 "steroid biosynthetic process" evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA] [GO:0007568 "aging" evidence=IEA] [GO:0008347 "glial cell migration" evidence=IEA] [GO:0008503 "benzodiazepine receptor activity" evidence=IEA] [GO:0010042 "response to manganese ion" evidence=IEA] [GO:0010266 "response to vitamin B1" evidence=IEA] [GO:0010940 "positive regulation of necrotic cell death" evidence=IEA] [GO:0014012 "peripheral nervous system axon regeneration" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0030325 "adrenal gland development" evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IDA] [GO:0032570 "response to progesterone" evidence=IEA] [GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IEA] [GO:0033574 "response to testosterone" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA] [GO:0043065 "positive regulation of apoptotic process" evidence=IEA] [GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA] [GO:0045019 "negative regulation of nitric oxide biosynthetic process" evidence=IEA] [GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0050810 "regulation of steroid biosynthetic process" evidence=IEA] [GO:0051901 "positive regulation of mitochondrial depolarization" evidence=IEA] [GO:0051928 "positive regulation of calcium ion transport" evidence=IEA] [GO:0060242 "contact inhibition" evidence=IEA] [GO:0060252 "positive regulation of glial cell proliferation" evidence=IEA] [GO:0060253 "negative regulation of glial cell proliferation" evidence=IEA] [GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA] [GO:0071294 "cellular response to zinc ion" evidence=IEA] [GO:0071476 "cellular hypotonic response" evidence=IEA] [GO:2000379 "positive regulation of reactive oxygen species metabolic process" evidence=IEA] InterPro:IPR004307 Pfam:PF03073 GO:GO:0016021 GO:GO:0007165 GO:GO:0005741 GO:GO:0006694 GO:GO:0030325 GO:GO:0042493 GO:GO:0050810 GO:GO:0007268 GO:GO:0007568 GO:GO:0048266 GO:GO:0043065 GO:GO:0071222 GO:GO:2000379 GO:GO:0032720 GO:GO:0010042 GO:GO:0033574 GO:GO:0032570 GO:GO:0071294 GO:GO:0051901 GO:GO:0045019 GO:GO:0005497 GO:GO:0051928 GO:GO:0010940 GO:GO:0014012 GO:GO:0008347 GO:GO:0071476 GO:GO:0060252 GO:GO:0060253 GO:GO:0008503 GO:GO:0010266 GO:GO:0006821 GO:GO:0060242 EMBL:Z82214 HOGENOM:HOG000224659 HOVERGEN:HBG001296 PANTHER:PTHR10057 HGNC:HGNC:1158 ChiTaRS:TSPO ProteinModelPortal:B1AH87 PRIDE:B1AH87 Ensembl:ENST00000428336 NextBio:35466364 ArrayExpress:B1AH87 Uniprot:B1AH87) HSP 1 Score: 65.4698 bits (158), Expect = 1.911e-13 Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRS-GGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ PP W+ PVW LY +MG+ +YLV++ GG K A +PL LYT QL LNW+W P++FG +Q+
Sbjct: 40 PSWHPPHWVLGPVWGTLYSAMGYGSYLVWKELGGFTEK--AVVPLGLYTGQLALNWAWPPIFFGARQM 105
BLAST of EMLSAG00000001798 vs. GO
Match: - (symbol:TSPO "Translocator protein" species:9606 "Homo sapiens" [GO:0005497 "androgen binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005741 "mitochondrial outer membrane" evidence=IEA] [GO:0006626 "protein targeting to mitochondrion" evidence=TAS] [GO:0006694 "steroid biosynthetic process" evidence=IEA] [GO:0006783 "heme biosynthetic process" evidence=TAS] [GO:0006820 "anion transport" evidence=TAS] [GO:0006821 "chloride transport" evidence=IEA] [GO:0006915 "apoptotic process" evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS] [GO:0007568 "aging" evidence=IEA] [GO:0008202 "steroid metabolic process" evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS] [GO:0008347 "glial cell migration" evidence=IEA] [GO:0008503 "benzodiazepine receptor activity" evidence=IEA] [GO:0010042 "response to manganese ion" evidence=IEA] [GO:0010266 "response to vitamin B1" evidence=IEA] [GO:0010940 "positive regulation of necrotic cell death" evidence=IEA] [GO:0014012 "peripheral nervous system axon regeneration" evidence=IEA] [GO:0015485 "cholesterol binding" evidence=TAS] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0030325 "adrenal gland development" evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IDA] [GO:0032374 "regulation of cholesterol transport" evidence=TAS] [GO:0032570 "response to progesterone" evidence=IEA] [GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IEA] [GO:0033574 "response to testosterone" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA] [GO:0043065 "positive regulation of apoptotic process" evidence=IEA] [GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA] [GO:0045019 "negative regulation of nitric oxide biosynthetic process" evidence=IEA] [GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0050810 "regulation of steroid biosynthetic process" evidence=IEA] [GO:0051901 "positive regulation of mitochondrial depolarization" evidence=IEA] [GO:0051928 "positive regulation of calcium ion transport" evidence=IEA] [GO:0060242 "contact inhibition" evidence=IEA] [GO:0060252 "positive regulation of glial cell proliferation" evidence=IEA] [GO:0060253 "negative regulation of glial cell proliferation" evidence=IEA] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] [GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA] [GO:0071294 "cellular response to zinc ion" evidence=IEA] [GO:0071476 "cellular hypotonic response" evidence=IEA] [GO:2000379 "positive regulation of reactive oxygen species metabolic process" evidence=IEA] InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0016021 GO:GO:0070062 GO:GO:0006626 GO:GO:0006915 GO:GO:0005741 GO:GO:0006694 GO:GO:0030325 GO:GO:0042493 GO:GO:0050810 GO:GO:0008202 GO:GO:0008283 GO:GO:0007568 GO:GO:0048266 GO:GO:0043065 GO:GO:0015485 GO:GO:0071222 GO:GO:2000379 GO:GO:0032720 GO:GO:0010042 GO:GO:0033574 GO:GO:0032570 GO:GO:0071294 GO:GO:0006783 GO:GO:0051901 GO:GO:0045019 GO:GO:0005497 DrugBank:DB01068 DrugBank:DB00822 GO:GO:0051928 DrugBank:DB00186 DrugBank:DB00962 GO:GO:0010940 GO:GO:0014012 GO:GO:0032374 GO:GO:0008347 DrugBank:DB00829 DrugBank:DB01198 DrugBank:DB00546 DrugBank:DB01544 DrugBank:DB00231 DrugBank:DB00402 DrugBank:DB00404 DrugBank:DB01215 DrugBank:DB00897 DrugBank:DB00425 GO:GO:0071476 GO:GO:0060252 GO:GO:0060253 DrugBank:DB00628 DrugBank:DB00801 GO:GO:0008503 GO:GO:0010266 GO:GO:0006821 GO:GO:0006820 GO:GO:0060242 EMBL:Z82214 HOGENOM:HOG000224659 OrthoDB:EOG7V7687 TreeFam:TF342852 PANTHER:PTHR10057 EMBL:M36035 EMBL:U12421 EMBL:AY998017 EMBL:BT006949 EMBL:CR456409 EMBL:AY383615 EMBL:BC001110 PIR:I38724 PIR:JE0149 PIR:S14257 RefSeq:NP_000705.2 RefSeq:NP_001243459.1 RefSeq:NP_001243460.1 UniGene:Hs.202 ProteinModelPortal:P30536 BioGrid:107168 BindingDB:P30536 ChEMBL:CHEMBL5742 DrugBank:DB01178 DrugBank:DB01594 DrugBank:DB01559 TCDB:9.A.24.1.1 DMDM:464399 PaxDb:P30536 PRIDE:P30536 DNASU:706 Ensembl:ENST00000329563 Ensembl:ENST00000337554 GeneID:706 KEGG:hsa:706 UCSC:uc003bdn.4 CTD:706 GeneCards:GC22P043547 HGNC:HGNC:1158 HPA:CAB011232 HPA:HPA046260 MIM:109610 neXtProt:NX_P30536 PharmGKB:PA25473 eggNOG:COG3476 InParanoid:P30536 KO:K05770 OMA:ATTLNYC PhylomeDB:P30536 ChiTaRS:TSPO GeneWiki:Translocator_protein GenomeRNAi:706 NextBio:2874 PRO:PR:P30536 ArrayExpress:P30536 Bgee:P30536 CleanEx:HS_TSPO Genevestigator:P30536 Uniprot:P30536) HSP 1 Score: 65.4698 bits (158), Expect = 4.861e-13 Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRS-GGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ PP W+ PVW LY +MG+ +YLV++ GG K A +PL LYT QL LNW+W P++FG +Q+
Sbjct: 40 PSWHPPHWVLGPVWGTLYSAMGYGSYLVWKELGGFTEK--AVVPLGLYTGQLALNWAWPPIFFGARQM 105
BLAST of EMLSAG00000001798 vs. GO
Match: - (symbol:Tspo "translocator protein" species:10090 "Mus musculus" [GO:0005497 "androgen binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005741 "mitochondrial outer membrane" evidence=ISO] [GO:0006694 "steroid biosynthetic process" evidence=ISO] [GO:0006811 "ion transport" evidence=ISO] [GO:0006821 "chloride transport" evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO] [GO:0008347 "glial cell migration" evidence=ISO] [GO:0008503 "benzodiazepine receptor activity" evidence=ISO] [GO:0010940 "positive regulation of necrotic cell death" evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0031965 "nuclear membrane" evidence=ISO] [GO:0032720 "negative regulation of tumor necrosis factor production" evidence=ISO] [GO:0043065 "positive regulation of apoptotic process" evidence=ISO] [GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO] [GO:0045019 "negative regulation of nitric oxide biosynthetic process" evidence=ISO] [GO:0048266 "behavioral response to pain" evidence=ISO] [GO:0050810 "regulation of steroid biosynthetic process" evidence=ISO] [GO:0051901 "positive regulation of mitochondrial depolarization" evidence=ISO] [GO:0051928 "positive regulation of calcium ion transport" evidence=ISO] [GO:0060242 "contact inhibition" evidence=ISO] [GO:0060252 "positive regulation of glial cell proliferation" evidence=ISO] [GO:0060253 "negative regulation of glial cell proliferation" evidence=ISO] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] [GO:2000379 "positive regulation of reactive oxygen species metabolic process" evidence=ISO] InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859 MGI:MGI:88222 GO:GO:0016021 GO:GO:0005739 GO:GO:0007165 GO:GO:0005741 GO:GO:0006694 GO:GO:0030325 GO:GO:0042493 GO:GO:0050810 GO:GO:0007268 GO:GO:0007568 GO:GO:0048266 GO:GO:0043065 GO:GO:0071222 GO:GO:2000379 GO:GO:0032720 GO:GO:0010042 GO:GO:0033574 GO:GO:0032570 GO:GO:0071294 GO:GO:0051901 GO:GO:0045019 GO:GO:0005497 GO:GO:0051928 GO:GO:0010940 GO:GO:0014012 GO:GO:0008347 GO:GO:0071476 GO:GO:0060252 GO:GO:0060253 GO:GO:0008503 GO:GO:0010266 GO:GO:0006821 GO:GO:0060242 HOGENOM:HOG000224659 HOVERGEN:HBG001296 OrthoDB:EOG7V7687 TreeFam:TF342852 PANTHER:PTHR10057 CTD:706 eggNOG:COG3476 KO:K05770 OMA:ATTLNYC EMBL:L17306 EMBL:D21207 EMBL:U12419 PIR:A53405 PIR:I57953 RefSeq:NP_033905.3 UniGene:Mm.1508 BindingDB:P50637 ChEMBL:CHEMBL2149 PaxDb:P50637 PRIDE:P50637 Ensembl:ENSMUST00000047419 GeneID:12257 KEGG:mmu:12257 UCSC:uc007xbg.2 InParanoid:P50637 NextBio:280682 PRO:PR:P50637 ArrayExpress:P50637 Bgee:P50637 CleanEx:MM_TSPO Genevestigator:P50637 Uniprot:P50637) HSP 1 Score: 63.929 bits (154), Expect = 1.717e-12 Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ PP W AP+W LY +MG+ +Y+V++ G + A +PL LYT QL LNW+W P++FG +Q+
Sbjct: 40 PSWHPPRWTLAPIWGTLYSAMGYGSYIVWKELGGFTED-AMVPLGLYTGQLALNWAWPPIFFGARQM 105
BLAST of EMLSAG00000001798 vs. GO
Match: - (symbol:TSPO "Translocator protein" species:9913 "Bos taurus" [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA] InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0016021 GO:GO:0031966 HOGENOM:HOG000224659 HOVERGEN:HBG001296 OrthoDB:EOG7V7687 TreeFam:TF342852 PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 CTD:706 eggNOG:COG3476 KO:K05770 EMBL:M64520 EMBL:BC102933 PIR:A39473 RefSeq:NP_786970.1 UniGene:Bt.49341 STRING:9913.ENSBTAP00000024060 BindingDB:P30535 PRIDE:P30535 Ensembl:ENSBTAT00000024060 GeneID:281033 KEGG:bta:281033 InParanoid:P30535 NextBio:20805120 Uniprot:P30535) HSP 1 Score: 63.929 bits (154), Expect = 1.839e-12 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P PP WI AP+W LY +MG+ +Y++++ G K A +PL LY QL LNW+W PL+FG +Q+
Sbjct: 40 PPWHPPRWILAPIWGTLYSAMGYGSYMIWKELGGFSK-EAVVPLGLYAGQLALNWAWPPLFFGTRQM 105
BLAST of EMLSAG00000001798 vs. GO
Match: - (symbol:Tspo "Translocator protein" species:10116 "Rattus norvegicus" [GO:0007268 "synaptic transmission" evidence=IDA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859 RGD:2228 GO:GO:0016021 GO:GO:0005741 GO:GO:0006694 GO:GO:0030325 GO:GO:0042493 GO:GO:0050810 GO:GO:0007568 GO:GO:0048266 GO:GO:0043065 GO:GO:0071222 GO:GO:2000379 GO:GO:0032720 GO:GO:0010042 GO:GO:0033574 GO:GO:0032570 GO:GO:0071294 GO:GO:0051901 GO:GO:0045019 GO:GO:0005497 GO:GO:0051928 GO:GO:0010940 GO:GO:0014012 GO:GO:0008347 GO:GO:0071476 GO:GO:0060252 GO:GO:0060253 GO:GO:0008503 GO:GO:0010266 GO:GO:0006821 GO:GO:0060242 HOGENOM:HOG000224659 HOVERGEN:HBG001296 OrthoDB:EOG7V7687 TreeFam:TF342852 PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 CTD:706 eggNOG:COG3476 KO:K05770 OMA:ATTLNYC EMBL:J05122 EMBL:M84221 PIR:JC1393 RefSeq:NP_036647.1 UniGene:Rn.1820 UniGene:Rn.229367 STRING:10116.ENSRNOP00000014089 BindingDB:P16257 ChEMBL:CHEMBL4552 PRIDE:P16257 Ensembl:ENSRNOT00000014089 GeneID:24230 KEGG:rno:24230 UCSC:RGD:2228 InParanoid:P16257 NextBio:602675 PRO:PR:P16257 Genevestigator:P16257 Uniprot:P16257) HSP 1 Score: 63.929 bits (154), Expect = 1.990e-12 Identity = 29/67 (43.28%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ PP W AP+W LY +MG+ +Y++++ G + A +PL LYT QL LNW+W P++FG +Q+
Sbjct: 40 PSWHPPRWTLAPIWGTLYSAMGYGSYIIWKELGGFTE-EAMVPLGLYTGQLALNWAWPPIFFGARQM 105
BLAST of EMLSAG00000001798 vs. GO
Match: - (symbol:Tspo "translocator protein" species:10116 "Rattus norvegicus" [GO:0005497 "androgen binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO;IDA;TAS] [GO:0005741 "mitochondrial outer membrane" evidence=IDA] [GO:0006694 "steroid biosynthetic process" evidence=IMP] [GO:0006811 "ion transport" evidence=IDA] [GO:0006821 "chloride transport" evidence=IDA] [GO:0007268 "synaptic transmission" evidence=IDA] [GO:0007568 "aging" evidence=IEP] [GO:0008347 "glial cell migration" evidence=IDA] [GO:0008503 "benzodiazepine receptor activity" evidence=IDA] [GO:0010042 "response to manganese ion" evidence=IEP] [GO:0010266 "response to vitamin B1" evidence=IEP] [GO:0010940 "positive regulation of necrotic cell death" evidence=IMP] [GO:0014012 "peripheral nervous system axon regeneration" evidence=IEP] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0030325 "adrenal gland development" evidence=IEP] [GO:0031965 "nuclear membrane" evidence=ISO] [GO:0032570 "response to progesterone" evidence=IEP] [GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IDA] [GO:0033574 "response to testosterone" evidence=IEP] [GO:0042493 "response to drug" evidence=IEP] [GO:0043065 "positive regulation of apoptotic process" evidence=IMP] [GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO] [GO:0045019 "negative regulation of nitric oxide biosynthetic process" evidence=IDA] [GO:0048265 "response to pain" evidence=IEP] [GO:0048266 "behavioral response to pain" evidence=IMP] [GO:0048678 "response to axon injury" evidence=IEP] [GO:0050810 "regulation of steroid biosynthetic process" evidence=IMP] [GO:0051901 "positive regulation of mitochondrial depolarization" evidence=IDA] [GO:0051928 "positive regulation of calcium ion transport" evidence=IMP] [GO:0060242 "contact inhibition" evidence=IDA] [GO:0060252 "positive regulation of glial cell proliferation" evidence=IDA] [GO:0060253 "negative regulation of glial cell proliferation" evidence=IDA] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] [GO:0071222 "cellular response to lipopolysaccharide" evidence=IEP] [GO:0071294 "cellular response to zinc ion" evidence=IEP] [GO:0071476 "cellular hypotonic response" evidence=IEP] [GO:2000379 "positive regulation of reactive oxygen species metabolic process" evidence=IDA] InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859 RGD:2228 GO:GO:0016021 GO:GO:0005741 GO:GO:0006694 GO:GO:0030325 GO:GO:0042493 GO:GO:0050810 GO:GO:0007568 GO:GO:0048266 GO:GO:0043065 GO:GO:0071222 GO:GO:2000379 GO:GO:0032720 GO:GO:0010042 GO:GO:0033574 GO:GO:0032570 GO:GO:0071294 GO:GO:0051901 GO:GO:0045019 GO:GO:0005497 GO:GO:0051928 GO:GO:0010940 GO:GO:0014012 GO:GO:0008347 GO:GO:0071476 GO:GO:0060252 GO:GO:0060253 GO:GO:0008503 GO:GO:0010266 GO:GO:0006821 GO:GO:0060242 HOGENOM:HOG000224659 HOVERGEN:HBG001296 OrthoDB:EOG7V7687 TreeFam:TF342852 PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 CTD:706 eggNOG:COG3476 KO:K05770 OMA:ATTLNYC EMBL:J05122 EMBL:M84221 PIR:JC1393 RefSeq:NP_036647.1 UniGene:Rn.1820 UniGene:Rn.229367 STRING:10116.ENSRNOP00000014089 BindingDB:P16257 ChEMBL:CHEMBL4552 PRIDE:P16257 Ensembl:ENSRNOT00000014089 GeneID:24230 KEGG:rno:24230 UCSC:RGD:2228 InParanoid:P16257 NextBio:602675 PRO:PR:P16257 Genevestigator:P16257 Uniprot:P16257) HSP 1 Score: 63.929 bits (154), Expect = 1.990e-12 Identity = 29/67 (43.28%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ PP W AP+W LY +MG+ +Y++++ G + A +PL LYT QL LNW+W P++FG +Q+
Sbjct: 40 PSWHPPRWTLAPIWGTLYSAMGYGSYIIWKELGGFTE-EAMVPLGLYTGQLALNWAWPPIFFGARQM 105
BLAST of EMLSAG00000001798 vs. GO
Match: - (symbol:TSPO "Translocator protein" species:9823 "Sus scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0016021 GO:GO:0005739 OrthoDB:EOG7V7687 TreeFam:TF342852 PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 OMA:ATTLNYC EMBL:FP340367 Ensembl:ENSSSCT00000000035 Uniprot:F1SJR8) HSP 1 Score: 62.7734 bits (151), Expect = 4.317e-12 Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ PP W AP+W LY +MG+ +Y++++ G A +PL LY QL LNW+W PL+FG +Q+
Sbjct: 40 PSWHPPHWTLAPIWGTLYSAMGYGSYMIWKELGG-FSEEAVVPLGLYAGQLALNWAWPPLFFGARQM 105
BLAST of EMLSAG00000001798 vs. GO
Match: - (symbol:TSPO "Translocator protein" species:9823 "Sus scrofa" [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA] InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0016021 GO:GO:0031966 HOGENOM:HOG000224659 HOVERGEN:HBG001296 PANTHER:PTHR10057 CTD:706 eggNOG:COG3476 KO:K05770 EMBL:AY366497 RefSeq:NP_998918.1 UniGene:Ssc.5936 GeneID:396592 KEGG:ssc:396592 Uniprot:Q6UN27) HSP 1 Score: 62.3882 bits (150), Expect = 5.568e-12 Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ PP W AP+W LY +MG+ +Y++++ G A +PL LY QL LNW+W PL+FG +Q+
Sbjct: 40 PSWHPPHWTLAPIWGTLYSAMGYGSYMIWKELGG-FSEEAVVPLGLYAGQLALNWAWPPLFFGARQM 105
BLAST of EMLSAG00000001798 vs. C. finmarchicus
Match: gi|592946841|gb|GAXK01011712.1| (TSA: Calanus finmarchicus comp23539_c0_seq1 transcribed RNA sequence) HSP 1 Score: 75.485 bits (184), Expect = 4.932e-17 Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITI 70
P+ +PP W F PVW LY MG+A+YLVY+ GGD ++ L+LY+ QLLLNW+W+P++FG + +
Sbjct: 131 PSWRPPKWAFGPVWTVLYAGMGYASYLVYKEGGD------TMALMLYSSQLLLNWAWNPIFFGQHNVKL 319
BLAST of EMLSAG00000001798 vs. C. finmarchicus
Match: gi|592762003|gb|GAXK01192410.1| (TSA: Calanus finmarchicus comp522316_c0_seq1 transcribed RNA sequence) HSP 1 Score: 52.373 bits (124), Expect = 7.522e-9 Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITI 70
P+ P +W+ +Y MG+A+YLVY GG+ + L+LY +QLLL WS SP++FG + +
Sbjct: 142 PSWTPSSLAIRTIWSVIYACMGYASYLVYNEGGNPM------ALMLYGVQLLLTWSVSPVFFGLHNLKL 330
BLAST of EMLSAG00000001798 vs. C. finmarchicus
Match: gi|592798349|gb|GAXK01156219.1| (TSA: Calanus finmarchicus comp4669592_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 8.521e-2 Identity = 21/59 (35.59%), Postives = 29/59 (49.15%), Query Frame = 0
Query: 37 LKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITIHICWAPFSTLFGLDIICYLSQLFQY 95
L SI L LY + +L N+ + YF Y I +C F F LDI + S+LF +
Sbjct: 285 LFDLQSI*LYLYRIAVLFNYFFLTFYFVYFLIEFFLCRF*FQITFSLDIFLFASELFVF 461
BLAST of EMLSAG00000001798 vs. C. finmarchicus
Match: gi|592881410|gb|GAXK01076491.1| (TSA: Calanus finmarchicus comp98323_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 6.692e-1 Identity = 22/62 (35.48%), Postives = 28/62 (45.16%), Query Frame = 0
Query: 11 FAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITIHI 72
F P L+L GF V+ GG P ++PLV +LQ LL S P+ IHI
Sbjct: 1700 FPPHTVNLHL--GFQRQAVHDQGGPIKDVPEALPLVCRSLQKLLLSSTQPVGEEGNCPLIHI 1879
BLAST of EMLSAG00000001798 vs. C. finmarchicus
Match: gi|592832502|gb|GAXK01125042.1| (TSA: Calanus finmarchicus comp24058_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 1.269e+0 Identity = 17/37 (45.95%), Postives = 20/37 (54.05%), Query Frame = 0
Query: 56 WSWSPLYFGYQQITIHICWAPFSTLFGLDIICYLSQL 92
W + L Y QI W FSTLFGL I+C +S L
Sbjct: 1695 WYSTSLSSCYSQI-----WESFSTLFGLRIVCIMSLL 1790
BLAST of EMLSAG00000001798 vs. C. finmarchicus
Match: gi|592841548|gb|GAXK01115996.1| (TSA: Calanus finmarchicus comp168963_c2_seq8 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 3.134e+0 Identity = 21/69 (30.43%), Postives = 32/69 (46.38%), Query Frame = 0
Query: 36 KLKGPASIPLVLYTLQLLLNWS------WSPLYFGYQQITIH--ICWAPFSTLFGLDIICYLSQLFQYG 96
K P + L Y +Q++ NW W P+ F Y + H + A F+ L LD + YL ++ YG
Sbjct: 1067 KFSRPRNTILT-YIVQIICNWEFFFNHLWKPMLFSYSKKVDHFIVINAQFTFLNLLDNLSYLLRICSYG 1270
BLAST of EMLSAG00000001798 vs. C. finmarchicus
Match: gi|592841549|gb|GAXK01115995.1| (TSA: Calanus finmarchicus comp168963_c2_seq7 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 3.135e+0 Identity = 21/69 (30.43%), Postives = 32/69 (46.38%), Query Frame = 0
Query: 36 KLKGPASIPLVLYTLQLLLNWS------WSPLYFGYQQITIH--ICWAPFSTLFGLDIICYLSQLFQYG 96
K P + L Y +Q++ NW W P+ F Y + H + A F+ L LD + YL ++ YG
Sbjct: 1076 KFSRPRNTILT-YIVQIICNWEFFFNHLWKPMLFSYSKKVDHFIVINAQFTFLNLLDNLSYLLRICSYG 1279
BLAST of EMLSAG00000001798 vs. L. salmonis peptides
Match: EMLSAP00000001798 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1306:69017:69431:1 gene:EMLSAG00000001798 transcript:EMLSAT00000001798 description:"maker-LSalAtl2s1306-snap-gene-0.45") HSP 1 Score: 197.208 bits (500), Expect = 2.758e-66 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
Query: 1 MPALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITIHICWAPFSTLFGLDIICYLSQLFQYGVE 98
MPALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITIHICWAPFSTLFGLDIICYLSQLFQYGVE
Sbjct: 1 MPALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITIHICWAPFSTLFGLDIICYLSQLFQYGVE 98
BLAST of EMLSAG00000001798 vs. L. salmonis peptides
Match: EMLSAP00000011750 (pep:novel supercontig:LSalAtl2s:LSalAtl2s817:182578:184314:1 gene:EMLSAG00000011750 transcript:EMLSAT00000011750 description:"maker-LSalAtl2s817-augustus-gene-2.15") HSP 1 Score: 99.3673 bits (246), Expect = 3.107e-27 Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI-----TIHICWAP-FSTLFGLDIICY 88
P L+PP W+F PVW ++Y SMG+A+YLVY+SGG+KL P + L+ Y +QLL+NWSWSP++FGY+QI TI I W+ +T+ IC+
Sbjct: 44 PYLEPPSWVFGPVWTFIYFSMGYASYLVYKSGGNKLDIPVKVALLAYFVQLLVNWSWSPIFFGYKQISLAYYTIVILWSGILTTMIAFFRICH 136
BLAST of EMLSAG00000001798 vs. L. salmonis peptides
Match: EMLSAP00000004278 (pep:novel supercontig:LSalAtl2s:LSalAtl2s224:335715:337802:1 gene:EMLSAG00000004278 transcript:EMLSAT00000004278 description:"maker-LSalAtl2s224-augustus-gene-3.18") HSP 1 Score: 93.2041 bits (230), Expect = 5.311e-25 Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITI 70
P+ +PP W+F PVW LY+SMG+A+YL+Y GG L GPA +PL+LY QLLLNW W+PL+FG ++ +
Sbjct: 39 PSFRPPNWVFGPVWTSLYISMGYASYLIYEQGGKSLNGPAKVPLILYGTQLLLNWIWTPLFFGAHKLRL 107
BLAST of EMLSAG00000001798 vs. L. salmonis peptides
Match: EMLSAP00000000207 (pep:novel supercontig:LSalAtl2s:LSalAtl2s102:1497770:1500345:-1 gene:EMLSAG00000000207 transcript:EMLSAT00000000207 description:"maker-LSalAtl2s102-snap-gene-14.21") HSP 1 Score: 87.8113 bits (216), Expect = 3.703e-23 Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTL 50
PALQPPGW+FAPVW +LYL MGFA+YLVYRSGG+KLKGPASIPL Y +
Sbjct: 44 PALQPPGWVFAPVWTFLYLCMGFASYLVYRSGGEKLKGPASIPLAFYII 92
BLAST of EMLSAG00000001798 vs. L. salmonis peptides
Match: EMLSAP00000000656 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1104:123962:126073:-1 gene:EMLSAG00000000656 transcript:EMLSAT00000000656 description:"snap-LSalAtl2s1104-processed-gene-0.21") HSP 1 Score: 86.2705 bits (212), Expect = 1.401e-22 Identity = 39/69 (56.52%), Postives = 55/69 (79.71%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITI 70
P+L PP W+F VW YLYL+MG+A++LVY+SGG+KL G A L++Y + L +NWSWSP+YFG ++IT+
Sbjct: 12 PSLIPPDWVFPVVWTYLYLTMGYASFLVYQSGGEKLNGVA---LLIYIVHLFVNWSWSPIYFGQKKITL 77
BLAST of EMLSAG00000001798 vs. L. salmonis peptides
Match: EMLSAP00000002343 (pep:novel supercontig:LSalAtl2s:LSalAtl2s14465:175:588:-1 gene:EMLSAG00000002343 transcript:EMLSAT00000002343 description:"snap_masked-LSalAtl2s14465-processed-gene-0.0") HSP 1 Score: 85.1149 bits (209), Expect = 4.829e-22 Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITIHI 72
P+ +PP W+F PVW L++SMG+A+YL+Y GG L G A +PL+LY QLLLNW W+PL+F + +++
Sbjct: 52 PSFRPPNWVFGPVWTSLFISMGYASYLIYEQGGKSLTGSAKVPLILYGTQLLLNWIWTPLFFVFGTHKLNV 122
BLAST of EMLSAG00000001798 vs. L. salmonis peptides
Match: EMLSAP00000000206 (pep:novel supercontig:LSalAtl2s:LSalAtl2s102:1489733:1497762:-1 gene:EMLSAG00000000206 transcript:EMLSAT00000000206 description:"maker-LSalAtl2s102-snap-gene-14.22") HSP 1 Score: 56.6102 bits (135), Expect = 1.353e-11 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 0
Query: 32 SGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITI 70
SGG+KLKGPASIPLVLYTLQLLLNWSWSPLYF YQ+ITI
Sbjct: 44 SGGEKLKGPASIPLVLYTLQLLLNWSWSPLYFAYQEITI 82
BLAST of EMLSAG00000001798 vs. SwissProt
Match: gi|313104268|sp|P30536.3|TSPOA_HUMAN (RecName: Full=Translocator protein; AltName: Full=Mitochondrial benzodiazepine receptor; AltName: Full=PKBS; AltName: Full=Peripheral-type benzodiazepine receptor; Short=PBR) HSP 1 Score: 65.4698 bits (158), Expect = 1.263e-13 Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRS-GGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ PP W+ PVW LY +MG+ +YLV++ GG K A +PL LYT QL LNW+W P++FG +Q+
Sbjct: 40 PSWHPPHWVLGPVWGTLYSAMGYGSYLVWKELGGFTEK--AVVPLGLYTGQLALNWAWPPIFFGARQM 105
BLAST of EMLSAG00000001798 vs. SwissProt
Match: gi|75050143|sp|Q9GMC9.1|TSPO_SHEEP (RecName: Full=Translocator protein; AltName: Full=Peripheral-type benzodiazepine receptor; Short=PBR) HSP 1 Score: 64.3142 bits (155), Expect = 3.514e-13 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P PP WI AP+W LY +MG+ +YL+++ G K A +PL LY QL LNW+W PL+FG +Q+
Sbjct: 40 PPWHPPRWILAPIWGTLYSAMGYGSYLIWKELGGFSK-EAVVPLGLYAGQLALNWAWPPLFFGARQM 105
BLAST of EMLSAG00000001798 vs. SwissProt
Match: gi|1730586|sp|P50637.1|TSPO_MOUSE (RecName: Full=Translocator protein; AltName: Full=Mitochondrial benzodiazepine receptor; AltName: Full=PKBS; AltName: Full=Peripheral-type benzodiazepine receptor; Short=PBR) HSP 1 Score: 63.929 bits (154), Expect = 4.940e-13 Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ PP W AP+W LY +MG+ +Y+V++ G + A +PL LYT QL LNW+W P++FG +Q+
Sbjct: 40 PSWHPPRWTLAPIWGTLYSAMGYGSYIVWKELGGFTED-AMVPLGLYTGQLALNWAWPPIFFGARQM 105
BLAST of EMLSAG00000001798 vs. SwissProt
Match: gi|266796|sp|P30535.1|TSPO_BOVIN (RecName: Full=Translocator protein; AltName: Full=Isoquinoline-binding protein; Short=IBP; AltName: Full=PKBS; AltName: Full=Peripheral-type benzodiazepine receptor; Short=PBR) HSP 1 Score: 63.929 bits (154), Expect = 5.322e-13 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P PP WI AP+W LY +MG+ +Y++++ G K A +PL LY QL LNW+W PL+FG +Q+
Sbjct: 40 PPWHPPRWILAPIWGTLYSAMGYGSYMIWKELGGFSK-EAVVPLGLYAGQLALNWAWPPLFFGTRQM 105
BLAST of EMLSAG00000001798 vs. SwissProt
Match: gi|130253|sp|P16257.1|TSPO_RAT (RecName: Full=Translocator protein; AltName: Full=Mitochondrial benzodiazepine receptor; AltName: Full=PKBS; AltName: Full=Peripheral-type benzodiazepine receptor; Short=PBR) HSP 1 Score: 63.929 bits (154), Expect = 5.795e-13 Identity = 29/67 (43.28%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ PP W AP+W LY +MG+ +Y++++ G + A +PL LYT QL LNW+W P++FG +Q+
Sbjct: 40 PSWHPPRWTLAPIWGTLYSAMGYGSYIIWKELGGFTE-EAMVPLGLYTGQLALNWAWPPIFFGARQM 105
BLAST of EMLSAG00000001798 vs. SwissProt
Match: gi|75044530|sp|Q6UN27.1|TSPO_PIG (RecName: Full=Translocator protein; AltName: Full=Peripheral-type benzodiazepine receptor; Short=PBR) HSP 1 Score: 62.3882 bits (150), Expect = 1.770e-12 Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ PP W AP+W LY +MG+ +Y++++ G A +PL LY QL LNW+W PL+FG +Q+
Sbjct: 40 PSWHPPHWTLAPIWGTLYSAMGYGSYMIWKELGG-FSEEAVVPLGLYAGQLALNWAWPPLFFGARQM 105
BLAST of EMLSAG00000001798 vs. SwissProt
Match: gi|81790871|sp|Q8KBX2.1|TSPO_CHLTE (RecName: Full=Tryptophan-rich protein TspO; AltName: Full=Translocator protein TspO) HSP 1 Score: 51.2174 bits (121), Expect = 2.789e-8 Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQ 67
P+ PP W+F PVW L++ MG A V +G K ++ +VL+ +QL+LN WS +FG Q
Sbjct: 40 PSWNPPDWLFPPVWTILFIMMGTALAKVLGTGWK--KNEVNVGVVLFAIQLMLNLGWSASFFGMQS 103
BLAST of EMLSAG00000001798 vs. SwissProt
Match: gi|408360203|sp|O94327.2|TSPO_SCHPO (RecName: Full=Translocator protein homolog) HSP 1 Score: 50.447 bits (119), Expect = 6.733e-8 Identity = 23/72 (31.94%), Postives = 39/72 (54.17%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITIHIC 73
P PP F P W LYL+MG+A++L Y++ + + +LY QL N++W PL++G + + +
Sbjct: 45 PKFHPPASAFGPAWTLLYLTMGYASHLAYKADPLMITNASRNGSILYIAQLAANFAWMPLFYGLAKPKLALA 116
BLAST of EMLSAG00000001798 vs. Select Arthropod Genomes
Match: gb|KFM77967.1| (Translocator protein, partial [Stegodyphus mimosarum]) HSP 1 Score: 80.1073 bits (196), Expect = 1.117e-19 Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQ 67
P+ +PP W+FAPVW LY MG A+YLV++ G D +GPA +PL+LY L+LNW+W+P++FG +
Sbjct: 42 PSWRPPNWMFAPVWTSLYTGMGVASYLVWKHG-DGFQGPAKLPLILYGTNLILNWAWTPIFFGAHK 106
BLAST of EMLSAG00000001798 vs. Select Arthropod Genomes
Match: EGK96456.1 (AGAP000426-PC [Anopheles gambiae str. PEST]) HSP 1 Score: 80.1073 bits (196), Expect = 1.675e-19 Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P +PP W+FAPVW LY MG+A+YLV+++GG GPA +PL LY QL LNW+W+P++FG Q+
Sbjct: 42 PWFKPPNWLFAPVWTALYSGMGYASYLVWKTGGG-FGGPAQLPLALYGTQLALNWAWTPIFFGLHQL 107
BLAST of EMLSAG00000001798 vs. Select Arthropod Genomes
Match: EGK96455.1 (AGAP000426-PB [Anopheles gambiae str. PEST]) HSP 1 Score: 80.1073 bits (196), Expect = 1.675e-19 Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P +PP W+FAPVW LY MG+A+YLV+++GG GPA +PL LY QL LNW+W+P++FG Q+
Sbjct: 42 PWFKPPNWLFAPVWTALYSGMGYASYLVWKTGGG-FGGPAQLPLALYGTQLALNWAWTPIFFGLHQL 107
BLAST of EMLSAG00000001798 vs. Select Arthropod Genomes
Match: EAA06567.4 (AGAP000426-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 80.1073 bits (196), Expect = 1.675e-19 Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P +PP W+FAPVW LY MG+A+YLV+++GG GPA +PL LY QL LNW+W+P++FG Q+
Sbjct: 42 PWFKPPNWLFAPVWTALYSGMGYASYLVWKTGGG-FGGPAQLPLALYGTQLALNWAWTPIFFGLHQL 107
BLAST of EMLSAG00000001798 vs. Select Arthropod Genomes
Match: EFX69006.1 (hypothetical protein DAPPUDRAFT_301167 [Daphnia pulex]) HSP 1 Score: 75.485 bits (184), Expect = 8.111e-18 Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P+ +PP F VW LYL+MGFA+YLV+R GG+ L GPA +PL L+ +QL+LN++WS ++F Y +
Sbjct: 39 PSWRPPNLAFPIVWTLLYLTMGFASYLVWRDGGETLNGPAGLPLTLFAIQLVLNYAWSFIFFYYHNL 105
BLAST of EMLSAG00000001798 vs. Select Arthropod Genomes
Match: AAF51482.1 (translocator protein [Drosophila melanogaster]) HSP 1 Score: 72.7886 bits (177), Expect = 1.237e-16 Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQIT 69
P+ +PP +FAP+W LY MG+ +YLV+R GG A +PL+ Y QL LNW+W+P++FG I
Sbjct: 45 PSFKPPNSVFAPMWISLYAGMGYGSYLVWRDGGGFAGEAAKLPLIAYGTQLALNWAWTPIFFGQHNIK 112
BLAST of EMLSAG00000001798 vs. Select Arthropod Genomes
Match: XP_397432.2 (PREDICTED: translocator protein [Apis mellifera]) HSP 1 Score: 70.0922 bits (170), Expect = 9.466e-16 Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
P PP W+FAP W LY ++G+++YLV+R GD + A +PL +Y L+LNWSWSPL+FG +I
Sbjct: 41 PTWTPPNWLFAPAWTTLYCTIGYSSYLVWRD-GDGFRN-AILPLSIYGTNLILNWSWSPLFFGLHKI 105
BLAST of EMLSAG00000001798 vs. nr
Match: gi|225708718|gb|ACO10205.1| (Translocator protein [Caligus rogercresseyi]) HSP 1 Score: 110.923 bits (276), Expect = 7.250e-29 Identity = 47/69 (68.12%), Postives = 60/69 (86.96%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITI 70
PAL PPGW+FAPVW YLYLSMG A+YLVY++GG++L GPA IPL +Y QLL+NWSWSP++FG++QI +
Sbjct: 44 PALNPPGWLFAPVWTYLYLSMGLASYLVYKAGGERLNGPAGIPLAIYIAQLLINWSWSPIFFGFKQIVL 112
BLAST of EMLSAG00000001798 vs. nr
Match: gi|225717760|gb|ACO14726.1| (Translocator protein [Caligus clemensi]) HSP 1 Score: 106.301 bits (264), Expect = 4.568e-27 Identity = 48/94 (51.06%), Postives = 69/94 (73.40%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITIHICWAPFSTLFGLDIICYLSQLFQY 95
P+L PP W+FAPVW +LYLSMG A+YLVY++GG++L GPA IPL+LY +QLL+NW+W P++F +Q +T+ F L LD +C ++ L +
Sbjct: 44 PSLNPPSWLFAPVWTFLYLSMGLASYLVYKAGGERLNGPAGIPLILYVIQLLVNWAWPPIFFAFQLLTLA-----FYVLVALD-VCVITTLVAF 131
BLAST of EMLSAG00000001798 vs. nr
Match: gi|225717768|gb|ACO14730.1| (Translocator protein [Caligus clemensi]) HSP 1 Score: 106.301 bits (264), Expect = 4.712e-27 Identity = 48/94 (51.06%), Postives = 67/94 (71.28%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITIHICWAPFSTLFGLDIICYLSQLFQY 95
P+L PP W+FAPVW +LYLSMG A+YLVY++G ++ GPA IPL++Y QLL+NWSW P++F +QQIT+ F L LD +C ++ L +
Sbjct: 44 PSLNPPSWLFAPVWTFLYLSMGLASYLVYKAGDERFNGPAGIPLIIYVFQLLVNWSWPPIFFAFQQITLA-----FYVLVALD-VCVITTLVAF 131
BLAST of EMLSAG00000001798 vs. nr
Match: gi|290563105|gb|ADD38946.1| (Translocator protein [Lepeophtheirus salmonis]) HSP 1 Score: 99.3673 bits (246), Expect = 2.204e-24 Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI-----TIHICWAP-FSTLFGLDIICY 88
P L+PP W+F PVW ++Y SMG+A+YLVY+SGG+KL P + L+ Y +QLL+NWSWSP++FGY+QI TI I W+ +T+ IC+
Sbjct: 44 PYLEPPSWVFGPVWTFIYFSMGYASYLVYKSGGNKLDIPVKVALLAYFVQLLVNWSWSPIFFGYKQISLAYYTIVILWSGILTTMIAFFRICH 136
BLAST of EMLSAG00000001798 vs. nr
Match: gi|225712348|gb|ACO12020.1| (Translocator protein [Lepeophtheirus salmonis]) HSP 1 Score: 97.4413 bits (241), Expect = 1.305e-23 Identity = 46/93 (49.46%), Postives = 65/93 (69.89%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI-----TIHICWA-PFSTLFGLDIICY 88
P L+PP W+F PVW ++Y SMG+A+YLVY+SGG+KL P + L Y +QLL+NWSW+P++FGY+QI TI I W+ +T+ IC+
Sbjct: 44 PYLEPPSWVFGPVWTFIYFSMGYASYLVYKSGGNKLDIPVKVALHAYFVQLLVNWSWTPIFFGYKQISLAYYTIVILWSGVLTTMIAFFRICH 136
BLAST of EMLSAG00000001798 vs. nr
Match: gi|290562165|gb|ADD38479.1| (Translocator protein [Lepeophtheirus salmonis]) HSP 1 Score: 93.2041 bits (230), Expect = 3.877e-22 Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITI 70
P+ +PP W+F PVW LY+SMG+A+YL+Y GG L GPA +PL+LY QLLLNW W+PL+FG ++ +
Sbjct: 39 PSFRPPNWVFGPVWTSLYISMGYASYLIYEQGGKSLNGPAKVPLILYGTQLLLNWIWTPLFFGAHKLRL 107
BLAST of EMLSAG00000001798 vs. nr
Match: gi|225714148|gb|ACO12920.1| (Translocator protein [Lepeophtheirus salmonis]) HSP 1 Score: 91.6633 bits (226), Expect = 1.909e-21 Identity = 37/69 (53.62%), Postives = 51/69 (73.91%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITI 70
P+ +PP W+F PVW LY+SMG+A+YL+Y GG GPA +PL+LY QLLLNW W+PL+FG ++ +
Sbjct: 39 PSFRPPNWVFGPVWTSLYISMGYASYLIYEQGGKSFTGPAKVPLILYGTQLLLNWIWTPLFFGAHKLRL 107
BLAST of EMLSAG00000001798 vs. nr
Match: gi|225709970|gb|ACO10831.1| (Translocator protein [Caligus rogercresseyi]) HSP 1 Score: 90.8929 bits (224), Expect = 3.465e-21 Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITI 70
P+ +PP W+F PVW LY SMG+A+YL++ GG L GPA IPL LY QL+LNW+WSPL+FG ++ +
Sbjct: 39 PSYRPPNWVFGPVWTTLYASMGYASYLIFEQGGRSLTGPAQIPLALYASQLILNWTWSPLFFGAHKLRL 107
BLAST of EMLSAG00000001798 vs. nr
Match: gi|225709088|gb|ACO10390.1| (Translocator protein [Caligus rogercresseyi]) HSP 1 Score: 90.5077 bits (223), Expect = 5.119e-21 Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQITI 70
P+ +PP W+F PVW LY SMG+A+YL++ GG L GPA IPL LY QL+LNW+WSPL+FG ++ +
Sbjct: 39 PSYKPPKWVFGPVWTTLYASMGYASYLIFEQGGRSLTGPAQIPLALYASQLILNWTWSPLFFGAHKLRL 107
BLAST of EMLSAG00000001798 vs. nr
Match: gi|1133441871|ref|XP_019877382.1| (PREDICTED: translocator protein [Aethina tumida] >gi|1133441873|ref|XP_019877383.1| PREDICTED: translocator protein [Aethina tumida]) HSP 1 Score: 83.9593 bits (206), Expect = 2.041e-18 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0
Query: 2 PALQPPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQIT 69
PA PP W+F PVW LY SMG+A+YLVYR GG G A +PL+LY L LNW+W+P++FGY +I
Sbjct: 40 PAWSPPNWVFGPVWTGLYCSMGYASYLVYRDGGG-FDGAAKLPLILYGANLALNWAWTPIFFGYHKIK 106
BLAST of EMLSAG00000001798 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold268_size230776-snap-gene-1.38 (protein:Tk11103 transcript:maker-scaffold268_size230776-snap-gene-1.38-mRNA-1 annotation:"PREDICTED: translocator protein-like") HSP 1 Score: 62.7734 bits (151), Expect = 5.014e-14 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0
Query: 6 PPGWIFAPVWAYLYLSMGFATYLVYRSGGDKLKGPASIPLVLYTLQLLLNWSWSPLYFGYQQI 68
PP F VW LY +MG+A+YLVYR GG L+GPA L+LY QL +NW ++P++FG ++I
Sbjct: 44 PPKEAFPVVWTCLYGTMGYASYLVYRDGGG-LEGPARGALLLYGGQLAINWMYTPIFFGMEKI 105 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001798 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000001798 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 7
BLAST of EMLSAG00000001798 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 7
BLAST of EMLSAG00000001798 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 8
BLAST of EMLSAG00000001798 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 7
BLAST of EMLSAG00000001798 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000001798 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1306:69017..69431+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001798-684564 ID=EMLSAG00000001798-684564|Name=EMLSAG00000001798|organism=Lepeophtheirus salmonis|type=gene|length=415bp|location=Sequence derived from alignment at LSalAtl2s1306:69017..69431+ (Lepeophtheirus salmonis)back to top Add to Basket
|