EMLSAG00000001836, EMLSAG00000001836-684602 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001836
Unique NameEMLSAG00000001836-684602
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000001836 vs. C. finmarchicus
Match: gi|592930197|gb|GAXK01028348.1| (TSA: Calanus finmarchicus comp2974903_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 117.857 bits (294), Expect = 5.200e-29
Identity = 88/361 (24.38%), Postives = 152/361 (42.11%), Query Frame = 0
Query:    3 QVSQCLIKFIDAPTYMKTSIHSQIESTFPAISVCSSERKYRAQVLVENGFSSEADYDA----SWMSNNSFKSPEELYEDLTLRPDDVFSEISMDLFRPHPITGLSISSINTSNKDPSL----------MEQRHKEYGKCYTIYPSRTLRALGINNIHMSFKIPTRIFIHPEGQFMNVNTHIVINMEPNSLVENQITFEEFKLID---KSKETN-------PFRNFF-----------------------DQSMSCSQEKFDLCYIRYFKRLIRNKLQCRAPW-----------------------------------------IKLVGDIGGYVGLLMGVAVLDFFHFLRMLSLNKIETRL 275
            Q+  CL+K+   PTY+ + I  Q ++ FP I+ C +   Y+ +VL +NG      Y      +W+S NS  SP+ L++  T    D        L     I  ++  S  T   +P L           EQRH+ +G+C++ YP + L+ L I    ++ K   +I+IH EGQF+++N  + I   PN+  + QI +   K++D   KS+++        P+                           D+S+  ++++ +  Y  ++ R+   +  C  P                                          + L  +IGGYVGLL+GVA+   FH   M++L  ++TR+
Sbjct:  252 QIYNCLLKYFSVPTYISSYITDQNKAEFPEITFCKNGNGYKPEVLKQNGIEEATQYSGQKNHTWISTNSTVSPQSLFKTATYSVSD--------LIESFYIRTINADSSGTFGFNPPLDRSEPNHLMWREQRHRGFGRCHSAYPGKKLKNLMIYYTKLTLKQSVKIYIHHEGQFLDLNGRMGIKAMPNTKTQMQINWLHVKMLDQALKSQQSGFKCNGSVPYDTCMYGAVTNAMTSSTPSACTVPWVLDDKSVCTTKQEMNTSYWTHYNRITNQQADCPNPCAFLAVTAGGQNREEFHSNKSQVYFYFQSKTMINEESLLYTALSLFAEIGGYVGLLLGVAI---FHLADMINL-FLDTRI 1298          
BLAST of EMLSAG00000001836 vs. C. finmarchicus
Match: gi|592838164|gb|GAXK01119380.1| (TSA: Calanus finmarchicus comp2498093_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 112.079 bits (279), Expect = 7.681e-27
Identity = 65/248 (26.21%), Postives = 123/248 (49.60%), Query Frame = 0
Query:    1 MIQVSQCLIKFIDAPTYMKTSIHSQIESTFPAISVCSSERKYRAQVLVENGFSSEADYDAS----WMSNNSFKSPEELYEDLTLRPDDVFSEISMDLFRP--HPITGLSISSINTSNKDPSLM-EQRHKEYGKCYTIYPSRTLRALGINNIHMSFKIPTRIFIHPEGQFMNVNTHIVINMEPNSLVENQITFEEFKLIDKSKETNPFRNFFDQSMSCSQE-KFDLCYIRYFKRLIRNKL--QCRAPWI 238
            +IQV  CL K++  PTY+ + I  Q ++ FP I+ C +E  Y+  VL  NG   E  Y  +    W+S NS  +P+ L+   T    ++   + +   +   H   G  I+ +N S+++  +  E RH+ +G+C++ YP + L+ L +    +S K   ++++H EGQF+++N  + I     S ++ QI ++  K++D+S ++            C+    +D C      + + +     C  PW+
Sbjct:  670 LIQVYMCLDKYVSVPTYISSYITEQNKAEFPEITFCKNEESYKHSVLKPNGIPDEQHYSGTENHDWVSRNSLVTPQALFSKATYSATELIDNLYIRTIKADSHGDFGF-IAPLNRSDENFMIWRENRHRGFGRCHSAYPGQKLKQLMVYYAKISLKDSVKMYLHHEGQFLDLNGRMGIKALLGSKIQMQINWQHVKMLDQSVKS------VKSGYKCNGSIAYDKCMYAAVTKAMTSATSSNCTVPWV 1392          

HSP 2 Score: 35.8094 bits (81), Expect = 1.860e-1
Identity = 15/34 (44.12%), Postives = 21/34 (61.76%), Query Frame = 0
Query:  238 IKLVGDIGGYVGLLMGVAVLDFFHFLRMLSLNKI 271
            + L  +IGGYVGLL+GVA+      + +   NKI
Sbjct:  340 LSLFAEIGGYVGLLLGVAIFHLADLINLFIDNKI 441          
BLAST of EMLSAG00000001836 vs. C. finmarchicus
Match: gi|592930196|gb|GAXK01028349.1| (TSA: Calanus finmarchicus comp2974903_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 60.077 bits (144), Expect = 4.507e-10
Identity = 28/87 (32.18%), Postives = 46/87 (52.87%), Query Frame = 0
Query:    3 QVSQCLIKFIDAPTYMKTSIHSQIESTFPAISVCSSERKYRAQVLVENGFSSEADYDA----SWMSNNSFKSPEELYEDLTLRPDDV 85
            Q+  CL+K+   PTY+ + I  Q ++ FP I+ C +   Y+ +VL +NG      Y      +W+S NS  SP+ L++  T    D+
Sbjct:  252 QIYNCLLKYFSVPTYISSYITDQNKAEFPEITFCKNGNGYKPEVLKQNGIEEATQYSGQKNHTWISTNSTVSPQSLFKTATYSVSDL 512          
BLAST of EMLSAG00000001836 vs. C. finmarchicus
Match: gi|592795176|gb|GAXK01159392.1| (TSA: Calanus finmarchicus comp4827185_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 52.373 bits (124), Expect = 1.330e-7
Identity = 31/118 (26.27%), Postives = 57/118 (48.31%), Query Frame = 0
Query:    4 VSQCLIKFIDAPTYMKTSIHSQIESTFPAISVCSSERKYRAQVLVENGFSSEADYD--ASWMSNNSFKSPEELYEDLTLRPDDVFSEISMDLFRPHPITGLSISSINTSNKDPSLMEQ 119
            + +C+ K++   T         I + FP +S+C S   Y+  VL  NG   ++ Y   A W+SN   K+P EL+ ++    +D+  +I  +L+   P+ G S+  +N +     L  +
Sbjct:   73 IIECVDKYLSGNTATADKYQHIITAPFPDLSICPS-YPYKLDVLKSNGIPDKSTYQFKAGWVSNIKTKTPVELFNEVIYTAEDLVKDI--NLYMEQPMDGSSVKKMNIAKTKGKLCGE 417          
BLAST of EMLSAG00000001836 vs. C. finmarchicus
Match: gi|592782106|gb|GAXK01172462.1| (TSA: Calanus finmarchicus comp4997001_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 2.506e-1
Identity = 22/63 (34.92%), Postives = 30/63 (47.62%), Query Frame = 0
Query:    6 QCLIKFIDAPTYMKTSIHSQIESTFPAISVCSSERKYRAQVLVENGFSSEADYDASWMSNNSF 68
            +  + FI  PT     + S    TFP ISVC+S   Y  + L + G+SS   Y    M + SF
Sbjct:  110 ELFLYFIARPTSTSDGLASLDSKTFPEISVCTSP-PYNLEKLEQYGYSSVILYYLGLMQDGSF 295          
BLAST of EMLSAG00000001836 vs. C. finmarchicus
Match: gi|592869612|gb|GAXK01087950.1| (TSA: Calanus finmarchicus comp4595556_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 5.724e-1
Identity = 28/124 (22.58%), Postives = 53/124 (42.74%), Query Frame = 0
Query:  124 YGKCYTIYPSRTLRALGINN-----IHMSFKIPTRIFIHPEGQFMNVNTHIVINMEPNSLVEN-----QITFEEFKLIDKSKETNPFRNFFDQSMSCSQEKFDLCYIRYFKRLIRNKLQCRAPW 237
            +GKC+T+Y       LG+ N     I ++ K+P RIF+H    F+     + I  + +  +EN      I+   F  I  +K  +      D++ +  +   D  +    +R +   + C+  W
Sbjct:   14 FGKCHTMYEPH---LLGVRNKDAMFIVLNTKLPYRIFLHDPSLFLMATNPLTIP-QIDRFIENPKQDIPISLFSFNYISATKHID-----IDRADAPCENTDDYSFTDCIQRSVEESVGCKPKW 358          
BLAST of EMLSAG00000001836 vs. C. finmarchicus
Match: gi|592783850|gb|GAXK01170718.1| (TSA: Calanus finmarchicus comp4394078_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 6.536e-1
Identity = 11/23 (47.83%), Postives = 19/23 (82.61%), Query Frame = 0
Query:  237 WIKLVGDIGGYVGLLMGVAVLDF 259
            ++ LV ++GGY+GL +GV++LD 
Sbjct:   93 FLTLVAEVGGYLGLTLGVSLLDL 161          
BLAST of EMLSAG00000001836 vs. C. finmarchicus
Match: gi|592764831|gb|GAXK01189737.1| (TSA: Calanus finmarchicus comp2202253_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 8.101e-1
Identity = 13/40 (32.50%), Postives = 25/40 (62.50%), Query Frame = 0
Query:  228 RNKLQCRAPWIKLVGDIGGYVGLLMGVAVLDFFHFLRMLS 267
            + +L  +  +  L G+IGGY+GL +GV++L     L +++
Sbjct:   48 QTELYVKTAFSDLTGNIGGYLGLFLGVSLLQAVDLLNIIN 167          
BLAST of EMLSAG00000001836 vs. C. finmarchicus
Match: gi|592881982|gb|GAXK01076250.1| (TSA: Calanus finmarchicus comp6008505_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 32.7278 bits (73), Expect = 8.408e-1
Identity = 13/34 (38.24%), Postives = 22/34 (64.71%), Query Frame = 0
Query:  238 IKLVGDIGGYVGLLMGVAVLDFFHFLRMLSLNKI 271
            + L  +IGGY+GL++GVA+      + ML  ++I
Sbjct:   59 LSLFAEIGGYLGLMLGVAIFHTADLINMLLDSRI 160          
BLAST of EMLSAG00000001836 vs. C. finmarchicus
Match: gi|592885780|gb|GAXK01072595.1| (TSA: Calanus finmarchicus comp3476534_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.187 bits (69), Expect = 3.830e+0
Identity = 13/27 (48.15%), Postives = 19/27 (70.37%), Query Frame = 0
Query:  240 LVGDIGGYVGLLMGVAVLDFFHFLRML 266
            L G+IGGY+GL +GV++L  +  L  L
Sbjct:  857 LEGNIGGYLGLYLGVSLLQVWDLLNFL 937          
BLAST of EMLSAG00000001836 vs. L. salmonis peptides
Match: EMLSAP00000001836 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:49949:51329:-1 gene:EMLSAG00000001836 transcript:EMLSAT00000001836 description:"maker-LSalAtl2s1318-snap-gene-0.21")

HSP 1 Score: 618.616 bits (1594), Expect = 0.000e+0
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0
Query:    1 MIQVSQCLIKFIDAPTYMKTSIHSQIESTFPAISVCSSERKYRAQVLVENGFSSEADYDASWMSNNSFKSPEELYEDLTLRPDDVFSEISMDLFRPHPITGLSISSINTSNKDPSLMEQRHKEYGKCYTIYPSRTLRALGINNIHMSFKIPTRIFIHPEGQFMNVNTHIVINMEPNSLVENQITFEEFKLIDKSKETNPFRNFFDQSMSCSQEKFDLCYIRYFKRLIRNKLQCRAPWIKLVGDIGGYVGLLMGVAVLDFFHFLRMLSLNKIETRLRVSPTPQTVINKYNTKLNRHY 296
            MIQVSQCLIKFIDAPTYMKTSIHSQIESTFPAISVCSSERKYRAQVLVENGFSSEADYDASWMSNNSFKSPEELYEDLTLRPDDVFSEISMDLFRPHPITGLSISSINTSNKDPSLMEQRHKEYGKCYTIYPSRTLRALGINNIHMSFKIPTRIFIHPEGQFMNVNTHIVINMEPNSLVENQITFEEFKLIDKSKETNPFRNFFDQSMSCSQEKFDLCYIRYFKRLIRNKLQCRAPWIKLVGDIGGYVGLLMGVAVLDFFHFLRMLSLNKIETRLRVSPTPQTVINKYNTKLNRHY
Sbjct:    1 MIQVSQCLIKFIDAPTYMKTSIHSQIESTFPAISVCSSERKYRAQVLVENGFSSEADYDASWMSNNSFKSPEELYEDLTLRPDDVFSEISMDLFRPHPITGLSISSINTSNKDPSLMEQRHKEYGKCYTIYPSRTLRALGINNIHMSFKIPTRIFIHPEGQFMNVNTHIVINMEPNSLVENQITFEEFKLIDKSKETNPFRNFFDQSMSCSQEKFDLCYIRYFKRLIRNKLQCRAPWIKLVGDIGGYVGLLMGVAVLDFFHFLRMLSLNKIETRLRVSPTPQTVINKYNTKLNRHY 296          
BLAST of EMLSAG00000001836 vs. L. salmonis peptides
Match: EMLSAP00000010561 (pep:novel supercontig:LSalAtl2s:LSalAtl2s700:43962:85210:-1 gene:EMLSAG00000010561 transcript:EMLSAT00000010561 description:"augustus_masked-LSalAtl2s700-processed-gene-0.0")

HSP 1 Score: 137.502 bits (345), Expect = 3.138e-38
Identity = 72/224 (32.14%), Postives = 123/224 (54.91%), Query Frame = 0
Query:    3 QVSQCLIKFIDAPTYMKTSIHSQIESTFPAISVCSSERKYRAQVLVENGFSSEADYDAS-------WMSNNSFKSPEELYEDLTLRPDDVFSEISMDLFRPHPITGLSISSINTSNKDPSLM-EQRHKEYGKCYTIYPSRTLRA--LGINNIHMSFKIPTRIFIHPEGQFMNVNTHIVINMEPNSLVENQITFEEFKLIDKSKETNPFRNFFDQSMSCSQEKFD 216
            Q +QCL K++D PTYM ++I  Q ES FPA++VC + + Y+ +VL  NGF+ EADY+ +       W SNNS  SP +LY+  +   +++  +  +  F    I G+    I     +P +  EQRH+ YGKCYTIYP   L+     +  +H+ FK P   ++H  GQF++++  +  ++     +E Q+ +++ +++ K+K             +CS + +D
Sbjct:   50 QSAQCLAKYLDHPTYMSSTIVDQTESEFPALTVCPNIKGYKPEVLAANGFAEEADYNDAVDGRKIRWTSNNSDVSPLQLYDTASYTLNELVGQFYIRYF--CKIAGIFGKEIPVRQDNPRMFTEQRHRSYGKCYTIYPGYQLKVKERAVYYMHLKFKEPILFYLHKTGQFLDLSGRMAYHVNIGERIETQVNYQDARMLIKTKPNG--------LKTCSNDDYD 263          
BLAST of EMLSAG00000001836 vs. L. salmonis peptides
Match: EMLSAP00000008517 (pep:novel supercontig:LSalAtl2s:LSalAtl2s524:54349:80630:-1 gene:EMLSAG00000008517 transcript:EMLSAT00000008517 description:"maker-LSalAtl2s524-augustus-gene-0.18")

HSP 1 Score: 131.339 bits (329), Expect = 8.481e-34
Identity = 72/249 (28.92%), Postives = 132/249 (53.01%), Query Frame = 0
Query:    3 QVSQCLIKFIDAPTYMKTSIHSQIESTFPAISVCSSERKYRAQVLVENGFSSEADYDA--------SWMSNNSFKSPEELYEDLTLRPDDVFSEISMDLFRPHPITG----LSISSINTSNKDPSLMEQRHKEYGKCYTIYPSRTLRALGINNIHMSFKIPTRIFIHPEGQFMNVNTHIVINMEPNSLVENQITFEEFKLIDKSKETNPFRNFFDQSMSCSQEKFDLCYIRYFKRLIRNKLQCRAPWIK 239
            Q+ + LIK+ + PTY+ T +  Q ++ FPAI++C +E  Y    L E+G +S  +Y+         +W+SN S  SP  L++ +T    D+   + +  F  HP  G    L++SS +T  K+P      H ++GKC+TIYP + +R LGI  +    ++P  I++H  GQF++++  +   +      E+QI++ + ++++K  +        + S  C    +D C  +    L+ ++L C +PW+K
Sbjct:   42 QIIRILIKYSEGPTYISTLVARQSDAEFPAITMCPNEEMYNLTRLREHGINSTDNYNGGAXRXATRTWLSNQSNTSPRALFDYITFSAKDLIRTVKVRTFEAHPERGFLVYLNVSS-STIKKNP------HLKFGKCWTIYPDKWIRDLGIYYMMFQLQLPVEIYLHQMGQFLDLSGRMGYKVVIGERHESQISYRDMRMLEKPDKG-------EGSFVCRTINYDHCMYQRITDLMVDQLGCVSPWVK 276          
BLAST of EMLSAG00000001836 vs. L. salmonis peptides
Match: EMLSAP00000008505 (pep:novel supercontig:LSalAtl2s:LSalAtl2s524:148477:156092:1 gene:EMLSAG00000008505 transcript:EMLSAT00000008505 description:"maker-LSalAtl2s524-augustus-gene-1.36")

HSP 1 Score: 126.716 bits (317), Expect = 2.124e-33
Identity = 72/245 (29.39%), Postives = 129/245 (52.65%), Query Frame = 0
Query:    1 MIQVSQCLIKFIDAPTYMKTSIHSQIESTFPAISVCSSERKYRAQVLVENGFSSEADY-DA------SWMSNNSFKSPEELYEDLTLRPDDVFSEISMDLFRPHPITGLSISSINTSNKDPSLMEQRHKEYGKCYTIYPSRTLRALGINNIHMSFKIPTRIFIHPEGQFMNVNTHIVINMEPNSLVENQITFEEFKLIDKSKETNPFRNFFDQSMSCSQEKFDLCYIRYFKRLIRNKLQCRAPWI 238
            ++Q+ + L K+ + PTY+ T I  + ++ FPAI++C +   Y    L E+GF S  DY DA      SW SN +  SP +L+  +T+  +++   I +D+       G    SI  +  D SL  + H+++G+C+T YP    R  GIN++ M+FK   +++IH   QF++++  +   +      E QI +++ K+++  KE N   NF+     C +  +D C      +++  +  C APW+
Sbjct:   39 VVQMVKILTKYSEGPTYISTIIDHKKKAKFPAITICPNNVMYNTSRLKEHGFESAKDYNDARNGRLISWTSNTTL-SPWDLFNYITMSSEEIIDSIILDVSHIRDGEG---DSIVLNGSDSSLNAKGHRKFGRCWTFYPEENFRTRGINSVKMNFKADVKLYIHRNHQFLDLSGRMGYKVNLGEGHETQINYQDMKMLE--KENNEEGNFY-----CKRILYDECMYGAVTQIMLQEAGCVAPWV 272          
BLAST of EMLSAG00000001836 vs. L. salmonis peptides
Match: EMLSAP00000006377 (pep:novel supercontig:LSalAtl2s:LSalAtl2s34:427505:445052:-1 gene:EMLSAG00000006377 transcript:EMLSAT00000006377 description:"maker-LSalAtl2s34-augustus-gene-4.26")

HSP 1 Score: 69.707 bits (169), Expect = 9.237e-14
Identity = 50/225 (22.22%), Postives = 102/225 (45.33%), Query Frame = 0
Query:   21 SIHSQIESTFPAISVCSSERKYRAQVLVEN-------GFSSEADYDASWMSNNSFKSPEELYEDLTLRPDDVFSEISMDLFRPHPITGLSISSINTSNKDPSLMEQRHKEYGKCYTIYPSRTLRALGINNIHMSFKIPTRIFIHPEGQFMNVNTHIVINMEPNSLVENQITFEEFKLIDKSKETNPFRNFFDQSMSCSQEKFDLCYIRYFKRLIRNKLQCRAPWI 238
            ++ +Q    FPAIS+C  +  Y+  VL E+        F+   +   + + +N +   +++  ++T   DD+ S++ +   R   +      +I+   ++    E+ H+++GKCY++  S      GI  + M  K   +++IH + QF++++  +   +      + Q+ ++    I     TN F        +CS   FD C     K  + ++  C APWI
Sbjct:   13 AVVNQYNGEFPAISICPWDPYYKVDVLKEDYNLTSVGHFNKMTEKQENLIWHNKY--GQDIICNITFHLDDLLSDLKIRALRT--LNDTLSQTIHPKIQNLKYKEKLHRKFGKCYSLNLSNETGDRGIYYVKMKLKKNIKLYIHADDQFLDLSGRMGYEIRLGETTKAQVNYQVINTIPGG--TNRF--------NCSYNSFDDCMYNSMKERMLSEYGCIAPWI 223          
BLAST of EMLSAG00000001836 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold294_size218657-processed-gene-1.0 (protein:Tk10438 transcript:snap_masked-scaffold294_size218657-processed-gene-1.0-mRNA-1 annotation:"t-complex protein 1 subunit beta")

HSP 1 Score: 116.701 bits (291), Expect = 2.133e-29
Identity = 67/247 (27.13%), Postives = 123/247 (49.80%), Query Frame = 0
Query:    2 IQVSQCLIKFIDAPTYMKTSIHSQIESTFPAISVCSSERKYRAQVLVENGFSSEADYD----ASWMSNNSFKSPEELYEDLTLRPDDVFSEISMDLFRPHPITGLSISSINTSNKDPSLMEQRHKEYGKCYTIYPSRTLRALGINNIHMSFKIPTRIFIHPEGQFMNVNTHIVINMEPNSLVENQITFEEFKLIDKSKETNPFRNFFDQSMSCSQEKFDLCYIRYFKRLIRNKLQCRAPWIKLVGDI 244
            +Q  +C++K+++ PTY  T I  Q ++ FPA+++C+S+  Y+ +VL  +G      Y+      W SN+S  SP EL+   TL   ++    S+ L +   + G S+  +  +N   +L  Q H+ +G+CYT YP   ++  GI  I +  ++  ++++H  GQF++ N  +     PN     Q+ FE+ + + K      F +   Q  +C    +D C     +R +  +  C  P++    DI
Sbjct:  949 VQSGRCVMKYLEEPTYFSTHIVPQRDADFPALTICASKSGYKDEVLRAHGIEGVKRYNFKKNLQWSSNHSNVSPSELFTLATLNHTELIKRFSVRLLKQDHM-GRSLRRLTLANG--ALTTQYHRGFGRCYTWYPPEAIKRYGIYYITIRMRVEGKVYLHKNGQFLDFNGRMGYLASPNEAYYFQVNFEDLRTLAKED----FGHEQPQK-TCLNTHYDQCIYSALERHMLTEAGCVVPYLPSQADI 1187          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001836 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001836 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 17
Match NameE-valueIdentityDescription
gi|592930197|gb|GAXK01028348.1|5.200e-2924.38TSA: Calanus finmarchicus comp2974903_c0_seq1 tran... [more]
gi|592838164|gb|GAXK01119380.1|7.681e-2726.21TSA: Calanus finmarchicus comp2498093_c0_seq1 tran... [more]
gi|592930196|gb|GAXK01028349.1|4.507e-1032.18TSA: Calanus finmarchicus comp2974903_c0_seq2 tran... [more]
gi|592795176|gb|GAXK01159392.1|1.330e-726.27TSA: Calanus finmarchicus comp4827185_c0_seq1 tran... [more]
gi|592782106|gb|GAXK01172462.1|2.506e-134.92TSA: Calanus finmarchicus comp4997001_c0_seq1 tran... [more]
gi|592869612|gb|GAXK01087950.1|5.724e-122.58TSA: Calanus finmarchicus comp4595556_c0_seq1 tran... [more]
gi|592783850|gb|GAXK01170718.1|6.536e-147.83TSA: Calanus finmarchicus comp4394078_c0_seq1 tran... [more]
gi|592764831|gb|GAXK01189737.1|8.101e-132.50TSA: Calanus finmarchicus comp2202253_c0_seq1 tran... [more]
gi|592881982|gb|GAXK01076250.1|8.408e-138.24TSA: Calanus finmarchicus comp6008505_c0_seq1 tran... [more]
gi|592885780|gb|GAXK01072595.1|3.830e+048.15TSA: Calanus finmarchicus comp3476534_c0_seq1 tran... [more]

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BLAST of EMLSAG00000001836 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAP000000018360.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:4994... [more]
EMLSAP000000105613.138e-3832.14pep:novel supercontig:LSalAtl2s:LSalAtl2s700:43962... [more]
EMLSAP000000085178.481e-3428.92pep:novel supercontig:LSalAtl2s:LSalAtl2s524:54349... [more]
EMLSAP000000085052.124e-3329.39pep:novel supercontig:LSalAtl2s:LSalAtl2s524:14847... [more]
EMLSAP000000063779.237e-1422.22pep:novel supercontig:LSalAtl2s:LSalAtl2s34:427505... [more]
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BLAST of EMLSAG00000001836 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001836 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001836 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001836 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
snap_masked-scaffold294_size218657-processed-gene-1.02.133e-2927.13protein:Tk10438 transcript:snap_masked-scaffold294... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1318supercontigLSalAtl2s1318:49949..51329 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1318-snap-gene-0.21
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001836 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001836EMLSAT00000001836-697683Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1318:49949..51329-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001836-684602 ID=EMLSAG00000001836-684602|Name=EMLSAG00000001836|organism=Lepeophtheirus salmonis|type=gene|length=1381bp|location=Sequence derived from alignment at LSalAtl2s1318:49949..51329- (Lepeophtheirus salmonis)
ATGATTCAAGTATCACAATGCCTAATAAAATTCATTGATGCTCCCACATA CATGAAAACCTCCATCCATTCTCAAATTGAGTCCACTTTCCCAGCAATCT CTGTTTGCTCTTCAGAAAGGAAATATCGAGCGCAAGTTTTGGTAGAGAAT GGATTTAGCTCTGAAGCGGACTATGATGCCTCTTGGATGAGCAATAACTC CTTCAAGTCTCCCGAGGAACTCTATGAGGATTTGACATTACGAGTGAATA CTACTTTTCCCCATATATAACGGCATAATATATTATCATTTCTTTTTGTA GCCAGATGATGTGTTTTCAGAAATATCCATGGATCTTTTTAGACCCCATC CCATCACTGGACTCTCAATTTCCTCTATTAATACCTCGAACAAGGACCCG TCTCTAATGGAACAGCGGCATAAAGAATACGGTAAATGCTACACCATCTA TCCGAGTCGTACTCTTCGGGCTTTGGGTATCAATAACATTCATATGTCTT TGTGAGAGTTAGGCTATTTTTATTTTACATTTAATTAATTGATTTTTTCA TTTTCCCCCAGCAAAATCCCTACTCGGATATTTATTCATCCTGAAGGGCA GTTTATGAATGTCAACACTCATATTGTCATTAACATGGAGCCTAATTCTC TAGTGGAGAATCAGGTTTGTTGTTATGAAGTCAAATACGTTGACAAAGTG TAATCATGTATATGCTTCTTTAGATTACCTTTGAAGAATTTAAACTGATT GACAAATCTAAGGAAACGAATCCCTTTCGAAATTTTTTTGATCAAAGCAT GTCCTGCTCTCAAGAGAAATTTGATTTATGCTACATTCGTTATTTCAAAA GATTGATTCGGAACAAACTTCAGTGTCGAGCACCTTGGATAAAAGTAGAT AANCTCAAATATTTGTAGAGATTCAGATCTTATTCAAAAGGCCTTGATAG AAGGGGAAAAGATTCAGGAGAAACAAAATCAACTATGTAAGGCACCTTGT ATCTTTCTTGTTTCCAAAACTGGAGCATCAAATACAAYGAACTACACTGG CAATGGGCTATGGGCACAAACATTAAGCTTTGATGACAGAATTGTTTACT CCGAGGAACAATATTTATATACTTTTACCAAGTTAGTGGGAGACATTGGG GGCTATGTGGGGCTCCTTATGGGAGTAGCTGTGTTGGATTTTTTCCATTT TCTTAGAATGTTGTCTCTTAATAAAATTGAGACTCGTCTTAGAGTGAGTC CAACACCTCAAACCGTCATTAATGTAATTCCAATAAAGGAAGTTTCTTAA ATTGATGTTAAAACATATATTCATTTTTCAAAATAAATTAGTTTATAGAA ATATAATACAAAACTGAATCGACATTATTAA
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