EMLSAG00000002527, EMLSAG00000002527-685293 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000002527
Unique NameEMLSAG00000002527-685293
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000002527 vs. GO
Match: - (symbol:Myl1 "myosin, light polypeptide 1" species:10090 "Mus musculus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0006936 "muscle contraction" evidence=ISO] [GO:0016459 "myosin complex" evidence=IEA] [GO:0030016 "myofibril" evidence=ISO] [GO:0043292 "contractile fiber" evidence=ISO] [GO:0060048 "cardiac muscle contraction" evidence=ISO] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13405 PROSITE:PS50222 SMART:SM00054 MGI:MGI:97269 GO:GO:0005509 Gene3D:1.10.238.10 GO:GO:0030016 GO:GO:0060048 GO:GO:0016459 eggNOG:COG5126 HOGENOM:HOG000233018 HOVERGEN:HBG012180 OrthoDB:EOG7HQN9N CTD:4632 KO:K05738 OMA:SKEQQDD TreeFam:TF351553 EMBL:K02241 EMBL:K02237 EMBL:K02238 EMBL:K02239 EMBL:K02240 EMBL:X12973 PIR:A23253 PIR:B23253 RefSeq:NP_001106858.1 RefSeq:NP_067260.1 RefSeq:XP_006495826.1 RefSeq:XP_006536976.1 UniGene:Mm.1000 ProteinModelPortal:P05977 SMR:P05977 BioGrid:201656 IntAct:P05977 MINT:MINT-149848 PhosphoSite:P05977 SWISS-2DPAGE:P05977 UCD-2DPAGE:P05977 PaxDb:P05977 PRIDE:P05977 Ensembl:ENSMUST00000027151 Ensembl:ENSMUST00000119429 GeneID:17901 KEGG:mmu:17901 UCSC:uc007bit.2 InParanoid:P05977 ChiTaRS:MYL1 NextBio:292723 PRO:PR:P05977 ArrayExpress:P05977 Bgee:P05977 CleanEx:MM_MYL1 Genevestigator:P05977 Uniprot:P05977)

HSP 1 Score: 45.0542 bits (105), Expect = 8.341e-6
Identity = 25/79 (31.65%), Postives = 41/79 (51.90%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEG----RVRFETFIPILQAVSSKPVTFHYGRF 78
            D K AF++FD   +  I  +QVG +       PT  +VK+++ N   E     ++ FE F+P++QA+S+      Y  F
Sbjct:   48 DFKEAFLLFDRTGECKITLSQVGDVLRALGTNPTNAEVKKVLGNPSNEEMNAKKIEFEQFLPMMQAISNNKDQGGYEDF 126
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BLAST of EMLSAG00000002527 vs. GO
Match: - (symbol:MYL6B "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13405 PROSITE:PS50222 SMART:SM00054 GO:GO:0005509 Gene3D:1.10.238.10 GeneTree:ENSGT00590000082921 KO:K12751 TreeFam:TF351553 CTD:140465 OMA:QNTKTYK EMBL:AAEX03006920 RefSeq:XP_848583.1 ProteinModelPortal:F6XIP5 Ensembl:ENSCAFT00000000176 GeneID:606992 KEGG:cfa:606992 Uniprot:F6XIP5)

HSP 1 Score: 43.5134 bits (101), Expect = 3.721e-5
Identity = 27/68 (39.71%), Postives = 38/68 (55.88%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEG----RVRFETFIPILQAVS 67
            + K AF +FD + D  I   Q G +       PT  +V R++ N K++     RV FETF+P+LQAVS
Sbjct:   69 EFKEAFELFDRVGDGKILYGQCGDVMRALGQNPTNAEVLRILGNPKSDELKSRRVDFETFLPMLQAVS 136
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BLAST of EMLSAG00000002527 vs. GO
Match: - (symbol:P02605 "Myosin light chain 3, skeletal muscle isoform" species:9031 "Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13405 Pfam:PF13499 PROSITE:PS50222 SMART:SM00054 GO:GO:0005509 Gene3D:1.10.238.10 PDB:1MVW PDB:1O18 PDB:1O19 PDB:1O1A PDB:1O1B PDB:1O1C PDB:1O1D PDB:1O1E PDB:1O1F PDB:1O1G PDBsum:1MVW PDBsum:1O18 PDBsum:1O19 PDBsum:1O1A PDBsum:1O1B PDBsum:1O1C PDBsum:1O1D PDBsum:1O1E PDBsum:1O1F PDBsum:1O1G GO:GO:0016459 HOGENOM:HOG000233018 HOVERGEN:HBG012180 EMBL:K02610 EMBL:K02609 UniGene:Gga.4835 EMBL:J00888 PIR:I50384 RefSeq:NP_001038097.1 PDB:2W4A PDB:2W4G PDB:2W4H PDBsum:2W4A PDBsum:2W4G PDBsum:2W4H ProteinModelPortal:P02605 SMR:P02605 PRIDE:P02605 GeneID:396470 KEGG:gga:396470 CTD:4632 KO:K05738 EvolutionaryTrace:P02605 NextBio:20816509 ArrayExpress:P02605 Uniprot:P02605)

HSP 1 Score: 41.9726 bits (97), Expect = 5.548e-5
Identity = 23/70 (32.86%), Postives = 37/70 (52.86%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEG----RVRFETFIPILQAVSSK 69
            D K AF++FD   D  I  +QVG I       PT  ++ +++ N   E     ++ FE F+P+LQA ++ 
Sbjct:   10 DFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEEFLPMLQAAANN 79
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BLAST of EMLSAG00000002527 vs. GO
Match: - (symbol:MYL1 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13405 Pfam:PF13499 PROSITE:PS50222 SMART:SM00054 GO:GO:0005509 Gene3D:1.10.238.10 GO:GO:0030016 GO:GO:0006936 GeneTree:ENSGT00590000082921 TreeFam:TF351553 EMBL:AADN03005405 ProteinModelPortal:F1NZG0 Ensembl:ENSGALT00000040054 ArrayExpress:F1NZG0 Uniprot:F1NZG0)

HSP 1 Score: 41.9726 bits (97), Expect = 5.757e-5
Identity = 23/70 (32.86%), Postives = 37/70 (52.86%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEG----RVRFETFIPILQAVSSK 69
            D K AF++FD   D  I  +QVG I       PT  ++ +++ N   E     ++ FE F+P+LQA ++ 
Sbjct:    9 DFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEEFLPMLQAAANN 78
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BLAST of EMLSAG00000002527 vs. GO
Match: - (symbol:mlc-5 species:6239 "Caenorhabditis elegans" [GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13405 PROSITE:PS50222 SMART:SM00054 GO:GO:0005509 Gene3D:1.10.238.10 GO:GO:0015629 GO:GO:0000281 eggNOG:COG5126 HOGENOM:HOG000233018 GeneTree:ENSGT00590000082921 KO:K12751 OMA:RPKEAEF EMBL:Z81120 PIR:T24862 RefSeq:NP_499813.1 UniGene:Cel.20526 ProteinModelPortal:Q9XVI9 SMR:Q9XVI9 IntAct:Q9XVI9 STRING:6239.T12D8.6.1 PaxDb:Q9XVI9 EnsemblMetazoa:T12D8.6.1 EnsemblMetazoa:T12D8.6.2 GeneID:176796 KEGG:cel:CELE_T12D8.6 UCSC:T12D8.6.1 CTD:176796 WormBase:T12D8.6 InParanoid:Q9XVI9 NextBio:894038 Uniprot:Q9XVI9)

HSP 1 Score: 41.5874 bits (96), Expect = 7.542e-5
Identity = 22/64 (34.38%), Postives = 33/64 (51.56%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVS 67
            D +  F  FD+  D  I   QVG +       PT+ ++ + V +   E R+ FE F+PI Q+VS
Sbjct:    6 DCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFEDFVPIFQSVS 69
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BLAST of EMLSAG00000002527 vs. GO
Match: - (symbol:mlc-5 "Protein MLC-5" species:6239 "Caenorhabditis elegans" [GO:0000281 "mitotic cytokinesis" evidence=IMP] [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IDA] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13405 PROSITE:PS50222 SMART:SM00054 GO:GO:0005509 Gene3D:1.10.238.10 GO:GO:0015629 GO:GO:0000281 eggNOG:COG5126 HOGENOM:HOG000233018 GeneTree:ENSGT00590000082921 KO:K12751 OMA:RPKEAEF EMBL:Z81120 PIR:T24862 RefSeq:NP_499813.1 UniGene:Cel.20526 ProteinModelPortal:Q9XVI9 SMR:Q9XVI9 IntAct:Q9XVI9 STRING:6239.T12D8.6.1 PaxDb:Q9XVI9 EnsemblMetazoa:T12D8.6.1 EnsemblMetazoa:T12D8.6.2 GeneID:176796 KEGG:cel:CELE_T12D8.6 UCSC:T12D8.6.1 CTD:176796 WormBase:T12D8.6 InParanoid:Q9XVI9 NextBio:894038 Uniprot:Q9XVI9)

HSP 1 Score: 41.5874 bits (96), Expect = 7.542e-5
Identity = 22/64 (34.38%), Postives = 33/64 (51.56%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVS 67
            D +  F  FD+  D  I   QVG +       PT+ ++ + V +   E R+ FE F+PI Q+VS
Sbjct:    6 DCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFEDFVPIFQSVS 69
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BLAST of EMLSAG00000002527 vs. GO
Match: - (symbol:Mlc-c "Myosin light chain cytoplasmic" species:7227 "Drosophila melanogaster" [GO:0016459 "myosin complex" evidence=ISS] [GO:0016461 "unconventional myosin complex" evidence=NAS] [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0032036 "myosin heavy chain binding" evidence=IPI] [GO:0030048 "actin filament-based movement" evidence=IC;IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0017022 "myosin binding" evidence=IPI] [GO:0031477 "myosin VII complex" evidence=IPI] [GO:0016460 "myosin II complex" evidence=IPI] [GO:0031475 "myosin V complex" evidence=IPI] [GO:0031476 "myosin VI complex" evidence=IPI] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13405 Pfam:PF13499 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 EMBL:AE014298 GO:GO:0030048 eggNOG:COG5126 GO:GO:0031476 GO:GO:0031475 GO:GO:0016460 GeneTree:ENSGT00590000082921 EMBL:U25057 EMBL:BT082023 RefSeq:NP_511049.1 UniGene:Dm.3980 ProteinModelPortal:P54357 SMR:P54357 BioGrid:57980 DIP:DIP-19766N IntAct:P54357 MINT:MINT-323736 PaxDb:P54357 PRIDE:P54357 EnsemblMetazoa:FBtr0070783 GeneID:31474 KEGG:dme:Dmel_CG3201 CTD:31474 FlyBase:FBgn0004687 HOGENOM:HOG000035937 InParanoid:P54357 KO:K12751 OrthoDB:EOG7HQN9N PhylomeDB:P54357 GenomeRNAi:31474 NextBio:773820 Bgee:P54357 GO:GO:0031477 Uniprot:P54357)

HSP 1 Score: 41.2022 bits (95), Expect = 1.164e-4
Identity = 26/72 (36.11%), Postives = 38/72 (52.78%), Query Frame = 0 
Query:    3 TDHRLIFFDIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVS 67
            T+ +L  F  + AF +FD   D  I  +QVG+        PT+  VK+     K + R+ FE F+PI QA+S
Sbjct:    5 TEDQLAEF--QEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPDERISFEVFLPIYQAIS 74
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BLAST of EMLSAG00000002527 vs. GO
Match: - (symbol:P02604 "Myosin light chain 1, skeletal muscle isoform" species:9031 "Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0006936 "muscle contraction" evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA] [GO:0030016 "myofibril" evidence=IEA] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13405 Pfam:PF13499 PROSITE:PS50222 SMART:SM00054 GO:GO:0005509 Gene3D:1.10.238.10 GO:GO:0030016 GO:GO:0006936 PDB:1ALM PDB:1M8Q PDBsum:1ALM PDBsum:1M8Q GO:GO:0016459 eggNOG:COG5126 HOGENOM:HOG000233018 HOVERGEN:HBG012180 GeneTree:ENSGT00590000082921 OrthoDB:EOG7HQN9N EMBL:K02610 EMBL:K02608 EMBL:K02609 EMBL:J00887 PIR:A91284 UniGene:Gga.4835 PDB:2MYS PDBsum:2MYS ProteinModelPortal:P02604 SMR:P02604 PaxDb:P02604 PRIDE:P02604 Ensembl:ENSGALT00000004587 InParanoid:P02604 EvolutionaryTrace:P02604 ArrayExpress:P02604 Uniprot:P02604)

HSP 1 Score: 41.5874 bits (96), Expect = 1.483e-4
Identity = 23/69 (33.33%), Postives = 37/69 (53.62%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEG----RVRFETFIPILQAVSS 68
            D K AF++FD   D  I  +QVG I       PT  ++ +++ N   E     ++ FE F+P+LQA ++
Sbjct:   52 DFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEEFLPMLQAAAN 120
[Close]
BLAST of EMLSAG00000002527 vs. GO
Match: - (symbol:myl1 "myosin, light chain 1, alkali; skeletal, fast" species:7955 "Danio rerio" [GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR002048 InterPro:IPR011992 PROSITE:PS50222 SMART:SM00054 ZFIN:ZDB-GENE-030131-8109 GO:GO:0005509 Gene3D:1.10.238.10 eggNOG:COG5126 HOGENOM:HOG000233018 HOVERGEN:HBG012180 GeneTree:ENSGT00590000082921 OrthoDB:EOG7HQN9N CTD:4632 KO:K05738 TreeFam:TF351553 EMBL:CR812481 EMBL:BC059795 EMBL:BC065629 RefSeq:NP_956294.1 UniGene:Dr.1448 STRING:7955.ENSDARP00000004932 Ensembl:ENSDART00000014207 GeneID:336165 KEGG:dre:336165 InParanoid:Q6P0G6 OMA:EDMASKR NextBio:20811614 Uniprot:Q6P0G6)

HSP 1 Score: 41.5874 bits (96), Expect = 1.573e-4
Identity = 24/79 (30.38%), Postives = 40/79 (50.63%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQV-------GKIPTKVKVKRLVQNQKTEG----RVRFETFIPILQAVSSKPVTFHYGRF 78
            D + AF++FD + D  +  NQ+       G+ PT  +V +++ N   +     RV FE F+P+LQ V + P    Y  +
Sbjct:   50 DYREAFLLFDRVGDSKVAYNQIADIMRALGQNPTNKEVTKILGNPTADDMVNKRVDFEGFLPMLQVVINNPNKATYDDY 128
[Close]
BLAST of EMLSAG00000002527 vs. GO
Match: - (symbol:MYL6B "Myosin light chain 6B" species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13405 PROSITE:PS50222 GO:GO:0005509 Gene3D:1.10.238.10 EMBL:AC034102 HGNC:HGNC:29823 ProteinModelPortal:F8W1I5 SMR:F8W1I5 Ensembl:ENST00000552568 NextBio:35512546 ArrayExpress:F8W1I5 Bgee:F8W1I5 Uniprot:F8W1I5)

HSP 1 Score: 40.0466 bits (92), Expect = 4.749e-4
Identity = 25/68 (36.76%), Postives = 39/68 (57.35%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEG----RVRFETFIPILQAVS 67
            + K AF +FD + D  I  +Q G +       PT  +V +++ N K++     RV FETF+P+LQAV+
Sbjct:   68 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVA 135
[Close]
BLAST of EMLSAG00000002527 vs. C. finmarchicus
Match: gi|592785470|gb|GAXK01169098.1| (TSA: Calanus finmarchicus comp1941_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 53.1434 bits (126), Expect = 6.197e-9
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKT----EGRVRFETFIPILQAVSSKPV 71
            D K  F +FDT  D  I  +QVG++       PT+ +VK+LVQ+  +    + RV FE F+P+LQ VSSKP+
Sbjct:  464 DFKEVFQLFDTKGDGLIQVSQVGEVLRALGTNPTEGEVKKLVQSTCSVDGPDTRVTFEMFLPMLQDVSSKPI 679
[Close]
BLAST of EMLSAG00000002527 vs. C. finmarchicus
Match: gi|592788166|gb|GAXK01166402.1| (TSA: Calanus finmarchicus comp1812_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 52.373 bits (124), Expect = 1.072e-8
Identity = 25/69 (36.23%), Postives = 42/69 (60.87%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVSSKPVT 72
            + + AF+++D   D  IP +Q+G +       PT+ +VK+LV   + + RV FE F+PI+QA+ S+  T
Sbjct:  447 EFQEAFLLYDQRGDGKIPVSQIGDVMRALGQNPTESEVKKLVVEHRADDRVTFEVFLPIMQAICSRRST 653
[Close]
BLAST of EMLSAG00000002527 vs. C. finmarchicus
Match: gi|592937695|gb|GAXK01020858.1| (TSA: Calanus finmarchicus comp13903_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 38.891 bits (89), Expect = 2.556e-4
Identity = 20/36 (55.56%), Postives = 29/36 (80.56%), Query Frame = 0 
Query:   40 KVKRLVQNQ-KTEG---RVRFETFIPILQAVSSKPV 71
            +VK+LVQ+  K++G   R+ FETF+P+LQ VSSKP+
Sbjct:    2 EVKKLVQSSCKSDGPDTRITFETFLPMLQDVSSKPI 109
[Close]
BLAST of EMLSAG00000002527 vs. C. finmarchicus
Match: gi|592799143|gb|GAXK01155425.1| (TSA: Calanus finmarchicus comp105808_c1_seq8 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 3.372e-1
Identity = 13/35 (37.14%), Postives = 23/35 (65.71%), Query Frame = 0 
Query:    4 DHRLIFFDIKYAFIVFDTISDIFIPANQVGKIPTK 38
            +H +I  ++ + FIVF +I+++F P    G+IP K
Sbjct:  768 EHLVIVIEMLWYFIVFLSITNMFSPLYSDGRIPAK 872
[Close]
BLAST of EMLSAG00000002527 vs. C. finmarchicus
Match: gi|592799170|gb|GAXK01155398.1| (TSA: Calanus finmarchicus comp105808_c0_seq5 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 3.372e-1
Identity = 13/35 (37.14%), Postives = 23/35 (65.71%), Query Frame = 0 
Query:    4 DHRLIFFDIKYAFIVFDTISDIFIPANQVGKIPTK 38
            +H +I  ++ + FIVF +I+++F P    G+IP K
Sbjct:   67 EHLVIVIEMLWYFIVFLSITNMFSPLYSDGRIPAK 171
[Close]
BLAST of EMLSAG00000002527 vs. C. finmarchicus
Match: gi|592799163|gb|GAXK01155405.1| (TSA: Calanus finmarchicus comp105808_c0_seq12 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 3.526e-1
Identity = 13/35 (37.14%), Postives = 23/35 (65.71%), Query Frame = 0 
Query:    4 DHRLIFFDIKYAFIVFDTISDIFIPANQVGKIPTK 38
            +H +I  ++ + FIVF +I+++F P    G+IP K
Sbjct:  112 EHLVIVIEMLWYFIVFLSITNMFSPLYSDGRIPAK 216
[Close]
BLAST of EMLSAG00000002527 vs. C. finmarchicus
Match: gi|592799164|gb|GAXK01155404.1| (TSA: Calanus finmarchicus comp105808_c0_seq11 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 3.535e-1
Identity = 13/35 (37.14%), Postives = 23/35 (65.71%), Query Frame = 0 
Query:    4 DHRLIFFDIKYAFIVFDTISDIFIPANQVGKIPTK 38
            +H +I  ++ + FIVF +I+++F P    G+IP K
Sbjct:  118 EHLVIVIEMLWYFIVFLSITNMFSPLYSDGRIPAK 222
[Close]
BLAST of EMLSAG00000002527 vs. C. finmarchicus
Match: gi|592799147|gb|GAXK01155421.1| (TSA: Calanus finmarchicus comp105808_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 3.561e-1
Identity = 13/35 (37.14%), Postives = 23/35 (65.71%), Query Frame = 0 
Query:    4 DHRLIFFDIKYAFIVFDTISDIFIPANQVGKIPTK 38
            +H +I  ++ + FIVF +I+++F P    G+IP K
Sbjct: 1083 EHLVIVIEMLWYFIVFLSITNMFSPLYSDGRIPAK 1187
[Close]
BLAST of EMLSAG00000002527 vs. C. finmarchicus
Match: gi|592799141|gb|GAXK01155427.1| (TSA: Calanus finmarchicus comp105808_c1_seq10 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 3.743e-1
Identity = 13/35 (37.14%), Postives = 23/35 (65.71%), Query Frame = 0 
Query:    4 DHRLIFFDIKYAFIVFDTISDIFIPANQVGKIPTK 38
            +H +I  ++ + FIVF +I+++F P    G+IP K
Sbjct:  688 EHLVIVIEMLWYFIVFLSITNMFSPLYSDGRIPAK 792
[Close]
BLAST of EMLSAG00000002527 vs. C. finmarchicus
Match: gi|592799142|gb|GAXK01155426.1| (TSA: Calanus finmarchicus comp105808_c1_seq9 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 3.749e-1
Identity = 13/35 (37.14%), Postives = 23/35 (65.71%), Query Frame = 0 
Query:    4 DHRLIFFDIKYAFIVFDTISDIFIPANQVGKIPTK 38
            +H +I  ++ + FIVF +I+++F P    G+IP K
Sbjct:  688 EHLVIVIEMLWYFIVFLSITNMFSPLYSDGRIPAK 792
[Close]
BLAST of EMLSAG00000002527 vs. L. salmonis peptides
Match: EMLSAP00000002527 (pep:novel supercontig:LSalAtl2s:LSalAtl2s149:717629:718105:-1 gene:EMLSAG00000002527 transcript:EMLSAT00000002527 description:"maker-LSalAtl2s149-snap-gene-6.74")

HSP 1 Score: 161.77 bits (408), Expect = 6.146e-53
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 
Query:    1 MTTDHRLIFFDIKYAFIVFDTISDIFIPANQVGKIPTKVKVKRLVQNQKTEGRVRFETFIPILQAVSSKPVTFHYGRFC 79
            MTTDHRLIFFDIKYAFIVFDTISDIFIPANQVGKIPTKVKVKRLVQNQKTEGRVRFETFIPILQAVSSKPVTFHYGRFC
Sbjct:    1 MTTDHRLIFFDIKYAFIVFDTISDIFIPANQVGKIPTKVKVKRLVQNQKTEGRVRFETFIPILQAVSSKPVTFHYGRFC 79
[Close]
BLAST of EMLSAG00000002527 vs. L. salmonis peptides
Match: EMLSAP00000010319 (pep:novel supercontig:LSalAtl2s:LSalAtl2s683:131004:131643:-1 gene:EMLSAG00000010319 transcript:EMLSAT00000010319 description:"maker-LSalAtl2s683-snap-gene-1.56")

HSP 1 Score: 92.0485 bits (227), Expect = 1.467e-24
Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVSSKPVT 72
            + + AF++FDT  D+ IPANQVG++       PT+ +VKRLVQNQK EGRV FETFIPILQAVSSKPVT
Sbjct:   47 EFQEAFMLFDTKGDVMIPANQVGEVLRALGQNPTEAEVKRLVQNQKAEGRVTFETFIPILQAVSSKPVT 115
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BLAST of EMLSAG00000002527 vs. L. salmonis peptides
Match: EMLSAP00000001818 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1311:26117:28222:1 gene:EMLSAG00000001818 transcript:EMLSAT00000001818 description:"maker-LSalAtl2s1311-augustus-gene-0.13")

HSP 1 Score: 46.9802 bits (110), Expect = 1.972e-8
Identity = 25/66 (37.88%), Postives = 37/66 (56.06%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVSSK 69
            D +  F ++D   D  IP   VG +       PT+ +VK+LV  ++ + RV FE F PILQA+ S+
Sbjct:   17 DFQETFALYDNRGDGKIPVGVVGDVMRALWQNPTESEVKKLVIQERADERVSFEVFXPILQAICSR 82
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BLAST of EMLSAG00000002527 vs. Select Arthropod Genomes
Match: EFX71457.1 (nonmuscle myosin essential light chain [Daphnia pulex])

HSP 1 Score: 53.5286 bits (127), Expect = 8.009e-10
Identity = 27/64 (42.19%), Postives = 37/64 (57.81%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVS 67
            D + AF +FD   D  +  +Q+G I       PT+  VK+L  N + E RV FE F+PILQA+S
Sbjct:   11 DFQEAFQLFDQKGDGCVQVSQIGDILRALGQNPTESDVKKLTHNHRPEARVNFEVFLPILQAIS 74
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BLAST of EMLSAG00000002527 vs. nr
Match: gi|225714074|gb|ACO12883.1| (Myosin-2 essential light chain [Lepeophtheirus salmonis] >gi|290562838|gb|ADD38814.1| Myosin-2 essential light chain [Lepeophtheirus salmonis])

HSP 1 Score: 92.4337 bits (228), Expect = 3.092e-22
Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVSSKPVT 72
            + + AF++FDT  D+ IPANQVG++       PT+ +VKRLVQNQK EGRV FETFIPILQAVSSKPVT
Sbjct:   14 EFQEAFMLFDTKGDVMIPANQVGEVLRALGQNPTEAEVKRLVQNQKAEGRVTFETFIPILQAVSSKPVT 82
[Close]
BLAST of EMLSAG00000002527 vs. nr
Match: gi|225718002|gb|ACO14847.1| (Myosin-2 essential light chain [Caligus clemensi])

HSP 1 Score: 92.4337 bits (228), Expect = 3.363e-22
Identity = 46/69 (66.67%), Postives = 54/69 (78.26%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVSSKPVT 72
            + + AF++FDT  D  IPANQVG++       PT+ +VKRLVQNQKTEGRV FETFIPILQAVSSKPVT
Sbjct:   14 EFQEAFMLFDTEGDGMIPANQVGEVLRALGQNPTEAEVKRLVQNQKTEGRVTFETFIPILQAVSSKPVT 82
[Close]
BLAST of EMLSAG00000002527 vs. nr
Match: gi|225711668|gb|ACO11680.1| (Myosin-2 essential light chain [Caligus rogercresseyi])

HSP 1 Score: 89.7373 bits (221), Expect = 3.909e-21
Identity = 44/69 (63.77%), Postives = 52/69 (75.36%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVSSKPVT 72
            + + AF++FDT  D  IPANQVG++       PT+ +VKRLVQNQKTEGRV FETFIPILQAVSSKP  
Sbjct:   14 EFQEAFMLFDTKGDGMIPANQVGEVLRALGQNPTEAEVKRLVQNQKTEGRVTFETFIPILQAVSSKPAA 82
[Close]
BLAST of EMLSAG00000002527 vs. nr
Match: gi|225717786|gb|ACO14739.1| (Myosin-2 essential light chain [Caligus clemensi])

HSP 1 Score: 89.3521 bits (220), Expect = 4.264e-21
Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVSSKPVT 72
            + + AF++FDT  D  IPANQVG++       P + +VKRLVQNQKTEGRV FETFIPILQAVSSKPVT
Sbjct:   14 EFQEAFMLFDTKGDGMIPANQVGEVLRALGQNPIEAEVKRLVQNQKTEGRVTFETFIPILQAVSSKPVT 82
[Close]
BLAST of EMLSAG00000002527 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold339_size202159-snap-gene-1.26 (protein:Tk01776 transcript:maker-scaffold339_size202159-snap-gene-1.26-mRNA-1 annotation:"myosin-2 essential light chain")

HSP 1 Score: 70.8626 bits (172), Expect = 1.625e-17
Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVSSKPVT 72
            + + AF++FDT  D  IP NQVG++       PT+ +++RL+ + KTEGRV FETF+PI  AVS K +T
Sbjct:   23 EFQEAFMLFDTKGDGMIPVNQVGEVVRALGQNPTEAEIRRLMHDNKTEGRVTFETFLPIFHAVSQKKMT 91
[Close]
BLAST of EMLSAG00000002527 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold14_size734282-snap-gene-6.25 (protein:Tk11306 transcript:maker-scaffold14_size734282-snap-gene-6.25-mRNA-1 annotation:"myosin-2 essential light chain")

HSP 1 Score: 49.6766 bits (117), Expect = 1.856e-9
Identity = 24/69 (34.78%), Postives = 41/69 (59.42%), Query Frame = 0 
Query:   11 DIKYAFIVFDTISDIFIPANQVGKI-------PTKVKVKRLVQNQKTEGRVRFETFIPILQAVSSKPVT 72
            + + AF+++D+  D  I  + +G +       PT+ +VK+LV   + + RV FETF+PI QA+ S+  T
Sbjct:   15 EFQEAFLLYDSRGDGKIAVSLIGDVMRALGQNPTESEVKKLVHEHRADDRVSFETFLPIFQAICSRRST 83
The following BLAST results are available for this feature:
BLAST of EMLSAG00000002527 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 10
Match NameE-valueIdentityDescription
-8.341e-631.65symbol:Myl1 "myosin, light polypeptide 1" species:... [more]
-3.721e-539.71symbol:MYL6B "Uncharacterized protein" species:961... [more]
-5.548e-532.86symbol:P02605 "Myosin light chain 3, skeletal musc... [more]
-5.757e-532.86symbol:MYL1 "Uncharacterized protein" species:9031... [more]
-7.542e-534.38symbol:mlc-5 species:6239 "Caenorhabditis elegans"... [more]
-7.542e-534.38symbol:mlc-5 "Protein MLC-5" species:6239 "Caenorh... [more]
-1.164e-436.11symbol:Mlc-c "Myosin light chain cytoplasmic" spec... [more]
-1.483e-433.33symbol:P02604 "Myosin light chain 1, skeletal musc... [more]
-1.573e-430.38symbol:myl1 "myosin, light chain 1, alkali; skelet... [more]
-4.749e-436.76symbol:MYL6B "Myosin light chain 6B" species:9606 ... [more]
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BLAST of EMLSAG00000002527 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 19
Match NameE-valueIdentityDescription
gi|592785470|gb|GAXK01169098.1|6.197e-943.06TSA: Calanus finmarchicus comp1941_c0_seq1 transcr... [more]
gi|592788166|gb|GAXK01166402.1|1.072e-836.23TSA: Calanus finmarchicus comp1812_c0_seq1 transcr... [more]
gi|592937695|gb|GAXK01020858.1|2.556e-455.56TSA: Calanus finmarchicus comp13903_c0_seq1 transc... [more]
gi|592799143|gb|GAXK01155425.1|3.372e-137.14TSA: Calanus finmarchicus comp105808_c1_seq8 trans... [more]
gi|592799170|gb|GAXK01155398.1|3.372e-137.14TSA: Calanus finmarchicus comp105808_c0_seq5 trans... [more]
gi|592799163|gb|GAXK01155405.1|3.526e-137.14TSA: Calanus finmarchicus comp105808_c0_seq12 tran... [more]
gi|592799164|gb|GAXK01155404.1|3.535e-137.14TSA: Calanus finmarchicus comp105808_c0_seq11 tran... [more]
gi|592799147|gb|GAXK01155421.1|3.561e-137.14TSA: Calanus finmarchicus comp105808_c1_seq4 trans... [more]
gi|592799141|gb|GAXK01155427.1|3.743e-137.14TSA: Calanus finmarchicus comp105808_c1_seq10 tran... [more]
gi|592799142|gb|GAXK01155426.1|3.749e-137.14TSA: Calanus finmarchicus comp105808_c1_seq9 trans... [more]

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BLAST of EMLSAG00000002527 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAP000000025276.146e-53100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s149:71762... [more]
EMLSAP000000103191.467e-2465.22pep:novel supercontig:LSalAtl2s:LSalAtl2s683:13100... [more]
EMLSAP000000018181.972e-837.88pep:novel supercontig:LSalAtl2s:LSalAtl2s1311:2611... [more]
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BLAST of EMLSAG00000002527 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002527 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1
Match NameE-valueIdentityDescription
EFX71457.18.009e-1042.19nonmuscle myosin essential light chain [Daphnia pu... [more]
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BLAST of EMLSAG00000002527 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 4
Match NameE-valueIdentityDescription
gi|225714074|gb|ACO12883.1|3.092e-2265.22Myosin-2 essential light chain [Lepeophtheirus sal... [more]
gi|225718002|gb|ACO14847.1|3.363e-2266.67Myosin-2 essential light chain [Caligus clemensi][more]
gi|225711668|gb|ACO11680.1|3.909e-2163.77Myosin-2 essential light chain [Caligus rogercress... [more]
gi|225717786|gb|ACO14739.1|4.264e-2165.22Myosin-2 essential light chain [Caligus clemensi][more]
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BLAST of EMLSAG00000002527 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 2
Match NameE-valueIdentityDescription
maker-scaffold339_size202159-snap-gene-1.261.625e-1747.83protein:Tk01776 transcript:maker-scaffold339_size2... [more]
maker-scaffold14_size734282-snap-gene-6.251.856e-934.78protein:Tk11306 transcript:maker-scaffold14_size73... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s149supercontigLSalAtl2s149:717629..718105 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s149-snap-gene-6.74
Biotypeprotein_coding
EvidenceIEA
NoteMyosin-2 essential light chain [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000002527 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000002527EMLSAT00000002527-698374Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s149:717629..718105-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000002527-685293 ID=EMLSAG00000002527-685293|Name=EMLSAG00000002527|organism=Lepeophtheirus salmonis|type=gene|length=477bp|location=Sequence derived from alignment at LSalAtl2s149:717629..718105- (Lepeophtheirus salmonis)
ATGACAACGGACCACAGATTAATATTCTTTGATATAAAATATGTATTTAC
GACATTAGTGCTTAGTTATTGAAATACTTTCAAACTTATATTAAGGAGGT
TGGTACTTTTTCATTTTTTTTATGTGAATAATTATCCTGAATTTGAAATT
TAAGTATGTACTAAATATTTATATTCCCTGCCTCTCATCCTCATTCTGTA
TATCATTTTGTGAAGGTATATCCATCAAAAATGACTAAAAACTAATTTTT
CTGATGATTAAATGACTGATTTGTAAAAGGCTTTTATTGTTTTTGACACC
ATAAGTGATATATTCATACCAGCAAATCAAGTTGGAAAAATTCCTACAAA
GGTCAAAGTGAAGCGTTTGGTACAGAATCAAAAGACTGAAGGAAGAGTTA
GATTTGAAACTTTTATTCCTATTCTTCAAGCAGTTTCTTCCAAACCCGTG
ACGTTCCACTATGGAAGATTTTGTTGA
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