EMLSAG00000002716, EMLSAG00000002716-685482 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000002716
Unique NameEMLSAG00000002716-685482
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000002716 vs. GO
Match: - (symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS] [GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0005875 "microtubule associated complex" evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599 GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR019775 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151 GeneTree:ENSGT00740000115057 KO:K10599 InterPro:IPR013915 Pfam:PF08606 OMA:QWQELKV FlyBase:FBgn0261119 EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 EnsemblMetazoa:FBtr0086723 GeneID:37123 KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9 GenomeRNAi:37123 NextBio:802060 PRO:PR:Q7KLW9 Uniprot:Q7KLW9)

HSP 1 Score: 54.299 bits (129), Expect = 1.310e-8
Identity = 30/67 (44.78%), Postives = 39/67 (58.21%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M  + ++  +  E P +   SG  F+K++IEK L  NG  DPIS   L  EELI IKT   +KPKPP
Sbjct:    1 MALVCALTNEVPETPVVSPHSGAVFEKRVIEKYLLENGC-DPISGKELKPEELIEIKTPAVVKPKPP 66
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BLAST of EMLSAG00000002716 vs. GO
Match: - (symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0000245 "spliceosomal complex assembly" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0001833 "inner cell mass cell proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA] [GO:0045665 "negative regulation of neuron differentiation" evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR019775 PROSITE:PS00678 GO:GO:0005811 GO:GO:0016607 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151 GO:GO:0048711 GO:GO:0001833 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 GO:GO:0048026 GeneTree:ENSGT00740000115057 InterPro:IPR013915 Pfam:PF08606 OMA:QWQELKV OrthoDB:EOG7K9K2R TreeFam:TF105919 EMBL:AAEX03011680 EMBL:AAEX03011681 Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3)

HSP 1 Score: 50.447 bits (119), Expect = 2.694e-7
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + SI  +  E P +   S   ++++LIEK +  NG  DPI+  PL  E+LI IK +  ++PKPP
Sbjct:   10 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGT-DPINNQPLSEEQLIDIKVAHPIRPKPP 75
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BLAST of EMLSAG00000002716 vs. GO
Match: - (symbol:AN6906 species:162425 "Aspergillus nidulans" [GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0005198 "structural molecule activity" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR006692 InterPro:IPR015943 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 EMBL:BN001301 GO:GO:0016192 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0030117 GO:GO:0000151 EMBL:AACD01000113 eggNOG:NOG319177 KO:K10599 OrthoDB:EOG7V76GC InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV RefSeq:XP_664510.1 ProteinModelPortal:Q5AXS4 SMR:Q5AXS4 STRING:162425.CADANIAP00007708 EnsemblFungi:CADANIAT00007708 GeneID:2870617 KEGG:ani:AN6906.2 Uniprot:Q5AXS4)

HSP 1 Score: 50.0618 bits (118), Expect = 3.406e-7
Identity = 23/64 (35.94%), Postives = 40/64 (62.50%), Query Frame = 0 
Query:    5 LSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            L +I  ++ + P +  KSG  F+K+L+E  +  NG  DP++ + L  E+LI +KT   ++P+PP
Sbjct:    2 LCAISGEAPQEPVVSPKSGSVFEKRLVEAYIAENGK-DPVNGEELSTEDLIEVKTQRVVRPRPP 64
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BLAST of EMLSAG00000002716 vs. GO
Match: - (symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913 "Bos taurus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0000245 "spliceosomal complex assembly" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS] [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0001833 "inner cell mass cell proliferation" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA] [GO:0045665 "negative regulation of neuron differentiation" evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005819 InterPro:IPR019775 PROSITE:PS00678 GO:GO:0005811 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151 GO:GO:0048711 GO:GO:0001833 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 GO:GO:0048026 PROSITE:PS51698 GeneTree:ENSGT00740000115057 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437 RefSeq:NP_001069108.1 UniGene:Bt.62928 ProteinModelPortal:Q08E38 STRING:9913.ENSBTAP00000019100 PRIDE:Q08E38 Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339 HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG7K9K2R TreeFam:TF105919 NextBio:20871070 Uniprot:Q08E38)

HSP 1 Score: 50.0618 bits (118), Expect = 3.508e-7
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + SI  +  E P +   S   ++++LIEK +  NG  DPI+  PL  E+LI IK +  ++PKPP
Sbjct:    1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGT-DPINNQPLSEEQLIDIKVAHPIRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. GO
Match: - (symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0000245 "spliceosomal complex assembly" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS] [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0001833 "inner cell mass cell proliferation" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA] [GO:0045665 "negative regulation of neuron differentiation" evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005819 InterPro:IPR019775 PROSITE:PS00678 GO:GO:0005811 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151 GO:GO:0048711 GO:GO:0001833 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 GO:GO:0048026 PROSITE:PS51698 GeneTree:ENSGT00740000115057 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG7K9K2R EMBL:BC107669 RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4 SMR:Q9JMJ4 IntAct:Q9JMJ4 PhosphoSite:Q9JMJ4 PaxDb:Q9JMJ4 PRIDE:Q9JMJ4 Ensembl:ENSRNOT00000028373 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496 InParanoid:Q9JMJ4 NextBio:623503 PRO:PR:Q9JMJ4 ArrayExpress:Q9JMJ4 Genevestigator:Q9JMJ4 Uniprot:Q9JMJ4)

HSP 1 Score: 50.0618 bits (118), Expect = 3.542e-7
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + SI  +  E P +   S   ++++LIEK +  NG  DPI+  PL  E+LI IK +  ++PKPP
Sbjct:    1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGT-DPINNQPLSEEQLIDIKVAHPIRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. GO
Match: - (symbol:Prpf19 "pre-mRNA processing factor 19" species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex" evidence=ISO;ISS] [GO:0001833 "inner cell mass cell proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005811 "lipid particle" evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process" evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO] [GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO] [GO:0042802 "identical protein binding" evidence=IEA;ISO] [GO:0045665 "negative regulation of neuron differentiation" evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA;ISO] [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005819 InterPro:IPR019775 PROSITE:PS00678 GO:GO:0005811 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151 GO:GO:0048711 GO:GO:0001833 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 GO:GO:0048026 PROSITE:PS51698 GeneTree:ENSGT00740000115057 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG7K9K2R EMBL:BC107669 RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4 SMR:Q9JMJ4 IntAct:Q9JMJ4 PhosphoSite:Q9JMJ4 PaxDb:Q9JMJ4 PRIDE:Q9JMJ4 Ensembl:ENSRNOT00000028373 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496 InParanoid:Q9JMJ4 NextBio:623503 PRO:PR:Q9JMJ4 ArrayExpress:Q9JMJ4 Genevestigator:Q9JMJ4 Uniprot:Q9JMJ4)

HSP 1 Score: 50.0618 bits (118), Expect = 3.542e-7
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + SI  +  E P +   S   ++++LIEK +  NG  DPI+  PL  E+LI IK +  ++PKPP
Sbjct:    1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGT-DPINNQPLSEEQLIDIKVAHPIRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. GO
Match: - (symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex" evidence=ISO] [GO:0001833 "inner cell mass cell proliferation" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex" evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005811 "lipid particle" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "cellular response to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0008610 "lipid biosynthetic process" evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO] [GO:0045665 "negative regulation of neuron differentiation" evidence=IDA] [GO:0045666 "positive regulation of neuron differentiation" evidence=ISA] [GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IMP] [GO:0048711 "positive regulation of astrocyte differentiation" evidence=IDA] [GO:0071013 "catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 MGI:MGI:106247 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005819 InterPro:IPR019775 PROSITE:PS00678 GO:GO:0005811 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681 InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0000398 GO:GO:0000151 GO:GO:0048711 GO:GO:0001833 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 GO:GO:0048026 PROSITE:PS51698 GeneTree:ENSGT00740000115057 KO:K10599 InterPro:IPR013915 Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998 EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 RefSeq:NP_001240772.1 RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.491104 ProteinModelPortal:Q99KP6 SMR:Q99KP6 BioGrid:205709 IntAct:Q99KP6 MINT:MINT-1867830 PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6 PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868 GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.2 InParanoid:Q99KP6 NextBio:306504 PRO:PR:Q99KP6 ArrayExpress:Q99KP6 Bgee:Q99KP6 Genevestigator:Q99KP6 Uniprot:Q99KP6)

HSP 1 Score: 50.0618 bits (118), Expect = 3.542e-7
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + SI  +  E P +   S   ++++LIEK +  NG  DPI+  PL  E+LI IK +  ++PKPP
Sbjct:    1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGT-DPINNQPLSEEQLIDIKVAHPIRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. GO
Match: - (symbol:nmp-200 "Nuclear matrix protein 200" species:9823 "Sus scrofa" [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0000245 "spliceosomal complex assembly" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0001833 "inner cell mass cell proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA] [GO:0045665 "negative regulation of neuron differentiation" evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR019775 PROSITE:PS00678 GO:GO:0005811 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151 GO:GO:0048711 GO:GO:0001833 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 GO:GO:0048026 GeneTree:ENSGT00740000115057 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG7K9K2R TreeFam:TF105919 EMBL:CU861565 EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045 ProteinModelPortal:B2CCY7 STRING:9823.ENSSSCP00000013941 Ensembl:ENSSSCT00000014327 GeneID:100144769 KEGG:ssc:100144769 Uniprot:B2CCY7)

HSP 1 Score: 50.0618 bits (118), Expect = 3.542e-7
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + SI  +  E P +   S   ++++LIEK +  NG  DPI+  PL  E+LI IK +  ++PKPP
Sbjct:    1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGT-DPINNQPLSEEQLIDIKVAHPIRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. GO
Match: - (symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0000245 "spliceosomal complex assembly" evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0001833 "inner cell mass cell proliferation" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005811 "lipid particle" evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI] [GO:0045665 "negative regulation of neuron differentiation" evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005819 InterPro:IPR019775 PROSITE:PS00678 GO:GO:0005811 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151 GO:GO:0048711 GO:GO:0001833 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 GO:GO:0048026 PROSITE:PS51698 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG7K9K2R TreeFam:TF105919 EMBL:AJ131186 EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 RefSeq:NP_055317.1 UniGene:Hs.502705 PDB:4LG8 PDBsum:4LG8 ProteinModelPortal:Q9UMS4 SMR:Q9UMS4 BioGrid:118151 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:9606.ENSP00000227524 PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968 SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4 DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339 UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448 HPA:HPA038051 MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355 InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 SignaLink:Q9UMS4 GeneWiki:PRPF19 GenomeRNAi:27339 NextBio:50404 PRO:PR:Q9UMS4 ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19 Genevestigator:Q9UMS4 Uniprot:Q9UMS4)

HSP 1 Score: 50.0618 bits (118), Expect = 3.542e-7
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + SI  +  E P +   S   ++++LIEK +  NG  DPI+  PL  E+LI IK +  ++PKPP
Sbjct:    1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGT-DPINNQPLSEEQLIDIKVAHPIRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. GO
Match: - (symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0043518 "negative regulation of DNA damage response, signal transduction by p53 class mediator" evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR019775 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GeneTree:ENSGT00740000115057 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV HOVERGEN:HBG053697 OrthoDB:EOG7K9K2R TreeFam:TF105919 CTD:321544 EMBL:CT990569 EMBL:CABZ01031654 EMBL:BC045954 EMBL:BC165225 RefSeq:NP_958875.1 UniGene:Dr.150278 STRING:7955.ENSDARP00000097371 Ensembl:ENSDART00000106593 GeneID:321544 KEGG:dre:321544 NextBio:20807418 PRO:PR:Q7ZV92 Uniprot:Q7ZV92)

HSP 1 Score: 49.2914 bits (116), Expect = 6.146e-7
Identity = 26/67 (38.81%), Postives = 39/67 (58.21%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + +I  +  E P +   S   F+++LIEK +  NG  DPI+  PL  E+LI IK S  ++PK P
Sbjct:    1 MSLVCAISNEVPEHPCVSPVSNQVFERRLIEKYIAENGA-DPINGQPLSEEQLIDIKVSHPIRPKAP 66
[Close]
BLAST of EMLSAG00000002716 vs. C. finmarchicus
Match: gi|592776634|gb|GAXK01177934.1| (TSA: Calanus finmarchicus comp15290_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 55.0694 bits (131), Expect = 2.670e-9
Identity = 26/68 (38.24%), Postives = 44/68 (64.71%), Query Frame = 0 
Query:    1 MMTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M +   ++  +  + P +   SG  ++++LIEK +   G+ DPI+K+PL +E+LI +K SP +KPKPP
Sbjct: 1442 MASLTCALSNEVPDCPVVSPVSGQVYERRLIEKYVTEAGI-DPINKEPLTIEQLIEVKCSPLVKPKPP 1642
[Close]
BLAST of EMLSAG00000002716 vs. C. finmarchicus
Match: gi|592916324|gb|GAXK01042051.1| (TSA: Calanus finmarchicus comp3070101_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 26.9498 bits (58), Expect = 4.551e+0
Identity = 13/32 (40.62%), Postives = 19/32 (59.38%), Query Frame = 0 
Query:    5 LSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLE 36
            L+ +RK+S   P   D SGL    +L+E +LE
Sbjct:   72 LAVVRKRSLGSPLTLDNSGLPKKPRLVENLLE 167
[Close]
BLAST of EMLSAG00000002716 vs. L. salmonis peptides
Match: EMLSAP00000002716 (pep:novel supercontig:LSalAtl2s:LSalAtl2s156:84236:84442:1 gene:EMLSAG00000002716 transcript:EMLSAT00000002716 description:"snap_masked-LSalAtl2s156-processed-gene-0.2")

HSP 1 Score: 132.494 bits (332), Expect = 8.783e-42
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 
Query:    1 MMTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            MMTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP
Sbjct:    1 MMTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
[Close]
BLAST of EMLSAG00000002716 vs. L. salmonis peptides
Match: EMLSAP00000000275 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1041:87486:87953:1 gene:EMLSAG00000000275 transcript:EMLSAT00000000275 description:"augustus_masked-LSalAtl2s1041-processed-gene-0.9")

HSP 1 Score: 90.8929 bits (224), Expect = 1.338e-24
Identity = 45/68 (66.18%), Postives = 51/68 (75.00%), Query Frame = 0 
Query:    1 MMTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M TF+ SI  +S E P I  KSGL +DK+LIEKVLESNG VDP+S DP  VEELI IK SP +KPKPP
Sbjct:    1 MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPP 68
[Close]
BLAST of EMLSAG00000002716 vs. SwissProt
Match: gi|122132456|sp|Q08E38.1|PRP19_BOVIN (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=PRP19/PSO4 homolog; AltName: Full=RING-type E3 ubiquitin transferase PRP19)

HSP 1 Score: 50.0618 bits (118), Expect = 7.286e-8
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + SI  +  E P +   S   ++++LIEK +  NG  DPI+  PL  E+LI IK +  ++PKPP
Sbjct:    1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGT-DPINNQPLSEEQLIDIKVAHPIRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. SwissProt
Match: gi|55976574|sp|Q99KP6.1|PRP19_MOUSE (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=Nuclear matrix protein 200; AltName: Full=PRP19/PSO4 homolog; AltName: Full=RING-type E3 ubiquitin transferase PRP19; AltName: Full=Senescence evasion factor >gi|84028243|sp|Q9JMJ4.2|PRP19_RAT RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=Neuronal differentiation-related gene protein; AltName: Full=PRP19/PSO4 homolog; AltName: Full=RING-type E3 ubiquitin transferase PRP19)

HSP 1 Score: 50.0618 bits (118), Expect = 7.358e-8
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + SI  +  E P +   S   ++++LIEK +  NG  DPI+  PL  E+LI IK +  ++PKPP
Sbjct:    1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGT-DPINNQPLSEEQLIDIKVAHPIRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. SwissProt
Match: gi|55976619|sp|Q9UMS4.1|PRP19_HUMAN (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=Nuclear matrix protein 200; AltName: Full=PRP19/PSO4 homolog; Short=hPso4; AltName: Full=RING-type E3 ubiquitin transferase PRP19; AltName: Full=Senescence evasion factor)

HSP 1 Score: 50.0618 bits (118), Expect = 7.358e-8
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + SI  +  E P +   S   ++++LIEK +  NG  DPI+  PL  E+LI IK +  ++PKPP
Sbjct:    1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGT-DPINNQPLSEEQLIDIKVAHPIRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. SwissProt
Match: gi|82082891|sp|Q5ZMA2.1|PRP19_CHICK (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=PRP19/PSO4 homolog; AltName: Full=RING-type E3 ubiquitin transferase PRP19)

HSP 1 Score: 48.521 bits (114), Expect = 3.045e-7
Identity = 24/67 (35.82%), Postives = 39/67 (58.21%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M  + SI  +  E P +   S   ++++LIEK +  NG  DP++  PL  E+LI IK +  ++P+PP
Sbjct:    1 MALICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGT-DPVNNQPLSEEQLIDIKVAHPIRPRPP 66
[Close]
BLAST of EMLSAG00000002716 vs. Select Arthropod Genomes
Match: EAA04221.5 (AGAP007217-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 62.3882 bits (150), Expect = 1.886e-12
Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + SI  +  E P I  KSG  F+++LIEK +  N   DPI+  PL  EELI +KT P ++PKPP
Sbjct:    1 MSLVCSISNEVPEHPCISPKSGAIFERRLIEKYIVENEC-DPINGQPLTAEELIDVKTPPIVRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. Select Arthropod Genomes
Match: XP_392284.2 (PREDICTED: pre-mRNA-processing factor 19 [Apis mellifera])

HSP 1 Score: 56.6102 bits (135), Expect = 1.593e-10
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M    +I  +  E P +   SG  F+K+LIEK L  NGV DPI+   L  ++LI IKT+  +KPKPP
Sbjct:    1 MALSCAISNEVPEHPVVSPVSGSIFEKRLIEKYLAENGV-DPITGKELTADQLIDIKTTAIVKPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. Select Arthropod Genomes
Match: gb|KYB25334.1| (hypothetical protein TcasGA2_TC034425 [Tribolium castaneum])

HSP 1 Score: 56.225 bits (134), Expect = 2.198e-10
Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M    ++  +  E P +   SG  F+K++IEK ++ +G  DPIS D L V++LI IKT P +KPKPP
Sbjct: 1240 MALFCALSNEVPEHPVVSPTSGAIFEKRIIEKYIQEHGK-DPISGDELTVDKLIEIKTPPIVKPKPP 1305
[Close]
BLAST of EMLSAG00000002716 vs. Select Arthropod Genomes
Match: EFX80977.1 (hypothetical protein DAPPUDRAFT_303758 [Daphnia pulex])

HSP 1 Score: 54.299 bits (129), Expect = 9.920e-10
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M    S+  +  E P +   SG  F+++LIEK +  NGV DPI+   + V++LI IKT P +KPK P
Sbjct:    1 MALCCSLSNEVPEHPVVSPVSGSVFERRLIEKYIADNGV-DPINGKEITVDQLIEIKTPPIVKPKVP 66
[Close]
BLAST of EMLSAG00000002716 vs. Select Arthropod Genomes
Match: AAF57684.1 (Pre-RNA processing factor 19 [Drosophila melanogaster])

HSP 1 Score: 54.299 bits (129), Expect = 1.207e-9
Identity = 30/67 (44.78%), Postives = 39/67 (58.21%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M  + ++  +  E P +   SG  F+K++IEK L  NG  DPIS   L  EELI IKT   +KPKPP
Sbjct:    1 MALVCALTNEVPETPVVSPHSGAVFEKRVIEKYLLENGC-DPISGKELKPEELIEIKTPAVVKPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. Select Arthropod Genomes
Match: gb|KFM80282.1| (Pre-mRNA-processing factor 19, partial [Stegodyphus mimosarum])

HSP 1 Score: 45.8246 bits (107), Expect = 4.813e-7
Identity = 26/67 (38.81%), Postives = 38/67 (56.72%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+   ++  +  E P +   SG  F+K+LI K ++ NG  DPI+   L  E LI IKT   +KP+PP
Sbjct:    1 MSLSCALSNEVPEQPVVSPASGSIFEKRLIVKYIQENGT-DPINGKELSEESLIEIKTPSAVKPRPP 66
[Close]
BLAST of EMLSAG00000002716 vs. nr
Match: gi|225718334|gb|ACO15013.1| (Pre-mRNA-processing factor 19 [Caligus clemensi])

HSP 1 Score: 84.3445 bits (207), Expect = 1.561e-17
Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 0 
Query:    1 MMTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M TF+ SI  +S E P +   SGL  +K+LIEK LESNG +DPISKDPL V +LI I++SP +KPKPP
Sbjct:    1 MTTFICSISNESPENPVLSPVSGLVHEKRLIEKALESNGSLDPISKDPLSVSDLIPIRSSPLVKPKPP 68
[Close]
BLAST of EMLSAG00000002716 vs. nr
Match: gi|684414790|ref|XP_009177959.1| (hypothetical protein T265_16154, partial [Opisthorchis viverrini] >gi|663034093|gb|KER18294.1| hypothetical protein T265_16154, partial [Opisthorchis viverrini])

HSP 1 Score: 71.633 bits (174), Expect = 1.336e-14
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + S+  +  E P I  KSG  F++++IEK L+ NG  DPI + PL VEELI IKTSPF++PKPP
Sbjct:    1 MSLICSLSNEVPEHPVISPKSGHVFERRVIEKYLQENGT-DPIDQQPLTVEELIEIKTSPFVRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. nr
Match: gi|684393898|ref|XP_009170736.1| (hypothetical protein T265_07048 [Opisthorchis viverrini] >gi|663049489|gb|KER25533.1| hypothetical protein T265_07048 [Opisthorchis viverrini])

HSP 1 Score: 75.0998 bits (183), Expect = 2.459e-14
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + S+  +  E P I  KSG  F++++IEK L+ NG  DPI + PL VEELI IKTSPF++PKPP
Sbjct:   48 MSLICSLSNEVPEHPVISPKSGHVFERRVIEKYLQENGT-DPIDQQPLTVEELIEIKTSPFVRPKPP 113
[Close]
BLAST of EMLSAG00000002716 vs. nr
Match: gi|358342425|dbj|GAA35974.2| (pre-mRNA-processing factor 19 [Clonorchis sinensis])

HSP 1 Score: 75.0998 bits (183), Expect = 2.463e-14
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + S+  +  E P I  KSG  F++++IEK L+ NG  DPI + PL VEELI IKTSPF++PKPP
Sbjct:   72 MSLICSLSNEVPEHPVISPKSGHVFERRVIEKYLQENGT-DPIDQQPLTVEELIEIKTSPFVRPKPP 137
[Close]
BLAST of EMLSAG00000002716 vs. nr
Match: gi|56756248|gb|AAW26299.1| (SJCHGC06229 protein [Schistosoma japonicum])

HSP 1 Score: 69.3218 bits (168), Expect = 2.778e-12
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ L S+  +  E P +  +SG  F+++LIEK L  NG  DPI + PL VEELI IK S F++PKPP
Sbjct:    1 MSLLCSLSNEVPEHPVVSPRSGHIFERRLIEKYLSENGT-DPIDQQPLAVEELIDIKASAFVRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. nr
Match: gi|1108476163|emb|CRK95561.1| (CLUMA_CG009025, isoform A [Clunio marinus])

HSP 1 Score: 65.855 bits (159), Expect = 4.697e-11
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+ + +I  +  + P I   SG  F+++LIEK L+ NGV DPIS   L VEELI IKT P LKPKPP
Sbjct:    1 MSLICAISNEIPDVPVISPSSGAIFERRLIEKYLQDNGV-DPISGKDLTVEELIEIKTPPVLKPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. nr
Match: gi|1061485548|gb|ODN02675.1| (Pre-mRNA-processing factor 19 [Orchesella cincta])

HSP 1 Score: 65.0846 bits (157), Expect = 7.938e-11
Identity = 29/67 (43.28%), Postives = 45/67 (67.16%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+F+ +I  +  E P +   SG  F+K+LIEK ++ NG  DP++ +PL +E+LI +KT  F+K KPP
Sbjct:    1 MSFVCAISNEVPETPVVSPLSGAVFEKRLIEKYMQENGNKDPVNGEPLELEQLIEVKTPAFIKAKPP 67
[Close]
BLAST of EMLSAG00000002716 vs. nr
Match: gi|576697472|gb|EUB61014.1| (Pre-mRNA-processing factor [Echinococcus granulosus])

HSP 1 Score: 63.5438 bits (153), Expect = 2.817e-10
Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+   S+  +  E P +  +SG  F+++LIEK L   G  DPI++ PL  EELI +KTSP ++PKPP
Sbjct:    1 MSLCCSLSNEVPEEPVLSPRSGHIFERRLIEKYLTETGC-DPINQQPLSPEELIEVKTSPLVRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. nr
Match: gi|674563984|emb|CDS21668.1| (pre mRNA processing factor 19 [Echinococcus granulosus])

HSP 1 Score: 63.5438 bits (153), Expect = 2.865e-10
Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+   S+  +  E P +  +SG  F+++LIEK L   G  DPI++ PL  EELI +KTSP ++PKPP
Sbjct:    1 MSLCCSLSNEVPEEPVLSPRSGHIFERRLIEKYLTETGC-DPINQQPLSPEELIEVKTSPLVRPKPP 66
[Close]
BLAST of EMLSAG00000002716 vs. nr
Match: gi|674267001|emb|CDI97389.1| (pre mRNA processing factor 19 [Echinococcus multilocularis])

HSP 1 Score: 63.5438 bits (153), Expect = 2.893e-10
Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 0 
Query:    2 MTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
            M+   S+  +  E P +  +SG  F+++LIEK L   G  DPI++ PL  EELI +KTSP ++PKPP
Sbjct:    1 MSLCCSLSNEVPEEPVLSPRSGHIFERRLIEKYLAETGC-DPINQQPLSPEELIEVKTSPLVRPKPP 66
The following BLAST results are available for this feature:
BLAST of EMLSAG00000002716 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 20
Match NameE-valueIdentityDescription
-1.310e-844.78symbol:Prp19 "Prp19" species:7227 "Drosophila mela... [more]
-2.694e-738.81symbol:PRPF19 "Uncharacterized protein" species:96... [more]
-3.406e-735.94symbol:AN6906 species:162425 "Aspergillus nidulans... [more]
-3.508e-738.81symbol:PRPF19 "Pre-mRNA-processing factor 19" spec... [more]
-3.542e-738.81symbol:Prpf19 "Pre-mRNA-processing factor 19" spec... [more]
-3.542e-738.81symbol:Prpf19 "pre-mRNA processing factor 19" spec... [more]
-3.542e-738.81symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing fact... [more]
-3.542e-738.81symbol:nmp-200 "Nuclear matrix protein 200" specie... [more]
-3.542e-738.81symbol:PRPF19 "Pre-mRNA-processing factor 19" spec... [more]
-6.146e-738.81symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)" ... [more]

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BLAST of EMLSAG00000002716 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 2
Match NameE-valueIdentityDescription
gi|592776634|gb|GAXK01177934.1|2.670e-938.24TSA: Calanus finmarchicus comp15290_c3_seq1 transc... [more]
gi|592916324|gb|GAXK01042051.1|4.551e+040.63TSA: Calanus finmarchicus comp3070101_c0_seq2 tran... [more]
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BLAST of EMLSAG00000002716 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000027168.783e-42100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s156:84236... [more]
EMLSAP000000002751.338e-2466.18pep:novel supercontig:LSalAtl2s:LSalAtl2s1041:8748... [more]
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BLAST of EMLSAG00000002716 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
gi|122132456|sp|Q08E38.1|PRP19_BOVIN7.286e-838.81RecName: Full=Pre-mRNA-processing factor 19; AltNa... [more]
gi|55976574|sp|Q99KP6.1|PRP19_MOUSE7.358e-838.81RecName: Full=Pre-mRNA-processing factor 19; AltNa... [more]
gi|55976619|sp|Q9UMS4.1|PRP19_HUMAN7.358e-838.81RecName: Full=Pre-mRNA-processing factor 19; AltNa... [more]
gi|82082891|sp|Q5ZMA2.1|PRP19_CHICK3.045e-735.82RecName: Full=Pre-mRNA-processing factor 19; AltNa... [more]
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BLAST of EMLSAG00000002716 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 6
Match NameE-valueIdentityDescription
EAA04221.51.886e-1246.27AGAP007217-PA [Anopheles gambiae str. PEST][more]
XP_392284.21.593e-1044.78PREDICTED: pre-mRNA-processing factor 19 [Apis mel... [more]
gb|KYB25334.1|2.198e-1043.28hypothetical protein TcasGA2_TC034425 [Tribolium c... [more]
EFX80977.19.920e-1041.79hypothetical protein DAPPUDRAFT_303758 [Daphnia pu... [more]
AAF57684.11.207e-944.78Pre-RNA processing factor 19 [Drosophila melanogas... [more]
gb|KFM80282.1|4.813e-738.81Pre-mRNA-processing factor 19, partial [Stegodyphu... [more]
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BLAST of EMLSAG00000002716 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|225718334|gb|ACO15013.1|1.561e-1758.82Pre-mRNA-processing factor 19 [Caligus clemensi][more]
gi|684414790|ref|XP_009177959.1|1.336e-1452.24hypothetical protein T265_16154, partial [Opisthor... [more]
gi|684393898|ref|XP_009170736.1|2.459e-1452.24hypothetical protein T265_07048 [Opisthorchis vive... [more]
gi|358342425|dbj|GAA35974.2|2.463e-1452.24pre-mRNA-processing factor 19 [Clonorchis sinensis... [more]
gi|56756248|gb|AAW26299.1|2.778e-1249.25SJCHGC06229 protein [Schistosoma japonicum][more]
gi|1108476163|emb|CRK95561.1|4.697e-1152.24CLUMA_CG009025, isoform A [Clunio marinus][more]
gi|1061485548|gb|ODN02675.1|7.938e-1143.28Pre-mRNA-processing factor 19 [Orchesella cincta][more]
gi|576697472|gb|EUB61014.1|2.817e-1044.78Pre-mRNA-processing factor [Echinococcus granulosu... [more]
gi|674563984|emb|CDS21668.1|2.865e-1044.78pre mRNA processing factor 19 [Echinococcus granul... [more]
gi|674267001|emb|CDI97389.1|2.893e-1044.78pre mRNA processing factor 19 [Echinococcus multil... [more]

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BLAST of EMLSAG00000002716 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s156supercontigLSalAtl2s156:84236..84442 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s156-processed-gene-0.2
Biotypeprotein_coding
EvidenceIEA
NotePre-mRNA-processing factor 19
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000002716 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000002716EMLSAT00000002716-698563Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s156:84236..84442+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000002716-685482 ID=EMLSAG00000002716-685482|Name=EMLSAG00000002716|organism=Lepeophtheirus salmonis|type=gene|length=207bp|location=Sequence derived from alignment at LSalAtl2s156:84236..84442+ (Lepeophtheirus salmonis)
ATGATGACTTTCCTAAGTTCAATAAGGAAGAAGAGCTCTGAGGGGCCCTT
CATCTACGACAAGTCTGGACTGTTCTTCGACAAGCAGCTGATTGAGAAGG
TGTTGGAAAGCAATGGTGTAGTGGATCCCATTTCTAAAGATCCTCTGATT
GTGGAGGAGCTGATTGGCATTAAAACAAGCCCTTTTTTGAAGCCCAAGCC
TCCTTAG
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