EMLSAG00000002728, EMLSAG00000002728-685494 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000002728
Unique NameEMLSAG00000002728-685494
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000002728 vs. GO
Match: - (symbol:si:ch211-255f4.7 "si:ch211-255f4.7" species:7955 "Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] Pfam:PF00096 InterPro:IPR007087 InterPro:IPR013087 PROSITE:PS00028 PROSITE:PS50157 InterPro:IPR015880 ZFIN:ZDB-GENE-050208-628 GO:GO:0046872 GO:GO:0003676 SMART:SM00355 Gene3D:3.30.160.60 GeneTree:ENSGT00530000063278 EMBL:AL954741 Ensembl:ENSDART00000145608 eggNOG:NOG310264 InParanoid:Q1MSZ4 OMA:PPENANK Uniprot:Q1MSZ4)

HSP 1 Score: 52.373 bits (124), Expect = 3.784e-7
Identity = 33/113 (29.20%), Postives = 55/113 (48.67%), Query Frame = 0 
Query:   65 ELFVFLGINYLIKYHKLPSLKHYWS--------SDMDVRNRFFQILRNLNINDIQTMSKEIK--DKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMK 167
            E++ F G   L+   + P+++ YWS        +D   R RFF++   + +     + ++++  DK  KV PF+D I    + L +  +   IGE MI F G    +Q  PMK
Sbjct:  254 EIYHFFGACILMSCIRYPTIRMYWSKALKITAITDKFTRARFFKLRGAIKVVIDHDVPEDLRMSDKFWKVRPFLDRILQGCLSL-NRPDCACIGEQMIPFTGACPYRQYLPMK 365
[Close]
BLAST of EMLSAG00000002728 vs. C. finmarchicus
Match: gi|592790474|gb|GAXK01164094.1| (TSA: Calanus finmarchicus comp5986333_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.4906 bits (62), Expect = 7.360e+0
Identity = 11/27 (40.74%), Postives = 19/27 (70.37%), Query Frame = 0 
Query:  126 PFIDAINNNFMMLYHVSEHISIGESMI 152
             F+D INN F+ L+++  HI++ E+ I
Sbjct:   25 SFLDQINNCFICLFYLFIHITVSENCI 105
[Close]
BLAST of EMLSAG00000002728 vs. L. salmonis peptides
Match: EMLSAP00000002728 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1575:23470:24214:-1 gene:EMLSAG00000002728 transcript:EMLSAT00000002728 description:"maker-LSalAtl2s1575-snap-gene-0.7")

HSP 1 Score: 345.895 bits (886), Expect = 1.672e-122
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0 
Query:    1 MLMSLPDNFSDDTDIKEDLEEEESNVDINLVSEILPSVKETISNRIQDSFYSNDDISNSSEIIKELFVFLGINYLIKYHKLPSLKHYWSSDMDVRNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            MLMSLPDNFSDDTDIKEDLEEEESNVDINLVSEILPSVKETISNRIQDSFYSNDDISNSSEIIKELFVFLGINYLIKYHKLPSLKHYWSSDMDVRNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI
Sbjct:    1 MLMSLPDNFSDDTDIKEDLEEEESNVDINLVSEILPSVKETISNRIQDSFYSNDDISNSSEIIKELFVFLGINYLIKYHKLPSLKHYWSSDMDVRNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
[Close]
BLAST of EMLSAG00000002728 vs. L. salmonis peptides
Match: EMLSAP00000006600 (pep:novel supercontig:LSalAtl2s:LSalAtl2s363:469811:470715:-1 gene:EMLSAG00000006600 transcript:EMLSAT00000006600 description:"augustus-LSalAtl2s363-processed-gene-4.2")

HSP 1 Score: 48.9062 bits (115), Expect = 1.316e-7
Identity = 33/107 (30.84%), Postives = 59/107 (55.14%), Query Frame = 0 
Query:   65 ELFVFLGINYLIKYHKLPSLKHYWSS--DMDV--------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLK 161
            E+  FLG+  +  Y+ LPS K YW++  DM+         R+RF +I++ L+I++ + ++     K+ K+ P  + + NN       +E +SI ESM+ ++G  S K
Sbjct:  163 EMRKFLGLLIISCYYCLPSEKDYWTTADDMEAPIFSKVMSRDRF-RIIKXLHISENENLAHS---KVAKIIPLFEMLRNNSQQFGVFNEQLSIDESMVPYRGLHSAK 265
[Close]
BLAST of EMLSAG00000002728 vs. SwissProt
Match: gi|296439278|sp|Q8N328.3|PGBD3_HUMAN (RecName: Full=PiggyBac transposable element-derived protein 3)

HSP 1 Score: 52.7582 bits (125), Expect = 2.283e-7
Identity = 37/120 (30.83%), Postives = 52/120 (43.33%), Query Frame = 0 
Query:   65 ELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYK 174
            E   FLGI +L  Y  +P  + +W    DV          R+RF  I  NL++ D   +  +  DK  K+ P I  +N   M       + S  E M+ + GR   KQ    KPI+  YK
Sbjct:  179 EFKCFLGIIFLSGYVSVPRRRMFWEQRTDVHNVLVSAAMRRDRFETIFSNLHVADNANL--DPVDKFSKLRPLISKLNERCMKFVPNETYFSFDEFMVPYFGRHGCKQFIRGKPIRFGYK 296
[Close]
BLAST of EMLSAG00000002728 vs. SwissProt
Match: gi|74749095|sp|Q6P3X8.1|PGBD2_HUMAN (RecName: Full=PiggyBac transposable element-derived protein 2)

HSP 1 Score: 50.8322 bits (120), Expect = 9.381e-7
Identity = 40/128 (31.25%), Postives = 55/128 (42.97%), Query Frame = 0 
Query:   58 NSSEIIKELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            N S   +EL   LGI  L  Y   P  + +W +  D           R+RF  I   L+  D   +  +  D+  KV P I  +N NF     + E  S GESM  + G    KQ +  KP++  YKI
Sbjct:  171 NLSLTAQELKCVLGILILSGYISYPRRRMFWETSPDSHHHLVADAIRRDRFELIFSYLHFADNNEL--DASDRFAKVRPLIIRMNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPVRLGYKI 296
[Close]
BLAST of EMLSAG00000002728 vs. Select Arthropod Genomes
Match: gb|KFM78273.1| (PiggyBac transposable element-derived protein 4, partial [Stegodyphus mimosarum])

HSP 1 Score: 97.4413 bits (241), Expect = 3.442e-23
Identity = 58/138 (42.03%), Postives = 83/138 (60.14%), Query Frame = 0 
Query:   52 SNDDISNSSEII-KELFVFLGINYLIKYHKLPSLKHYWSSD--MDVRN--------RFFQILRNLNINDIQT---MSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            + D I N  EI  +EL  ++G++ L+  H+LP LK+YWS+D  ++V++        RF +I   L++ND  T     +   DKLHKV P +  +N++    Y  S  +SI E MI FKGR+SLKQ  PMKPIKR YK+
Sbjct:   72 TKDIILNWKEITSEELKAWIGMHILMGIHQLPELKNYWSTDPILNVQSVARVMTAKRFKKITETLHVNDNSTNPPRGQPGHDKLHKVRPILSQLNDSICKAYEPSSTLSIDECMIAFKGRTSLKQYMPMKPIKRGYKV 209
[Close]
BLAST of EMLSAG00000002728 vs. Select Arthropod Genomes
Match: gb|KFM62055.1| (PiggyBac transposable element-derived protein 4, partial [Stegodyphus mimosarum])

HSP 1 Score: 87.8113 bits (216), Expect = 7.134e-20
Identity = 54/127 (42.52%), Postives = 75/127 (59.06%), Query Frame = 0 
Query:   63 IKELFVFLGINYLIKYHKLPSLKHYWSSD-----------MDVRNRFFQILRNLNINDIQTMSKE---IKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            ++++  FLGIN L+   KLPS + +WS++           M V+ +F  IL NL++ND   M K      DKL+KV P +  ++  F  L+   ++ SI ESMI FKGRSSLKQ  P KPIKR YK+
Sbjct:  142 LQDMLKFLGINILMGIKKLPSYRDFWSTNEILNESYVAKQMAVK-KFSWILGNLHLNDNSLMPKREDRTFDKLYKVRPLLTHLSERFDSLFRPGKNQSIDESMIRFKGRSSLKQYLPKKPIKRGYKV 267
[Close]
BLAST of EMLSAG00000002728 vs. Select Arthropod Genomes
Match: gb|KFM77001.1| (PiggyBac transposable element-derived protein 4, partial [Stegodyphus mimosarum])

HSP 1 Score: 82.0333 bits (201), Expect = 8.055e-18
Identity = 57/145 (39.31%), Postives = 80/145 (55.17%), Query Frame = 0 
Query:   46 IQDSFYSNDDISNSSEI-IKELFVFLGINYLIKYHKLPSLKHYWSSD-----------MDVRNRFFQILRNLNIND--IQT-MSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
             Q + Y+     N + I +KEL  FL IN L+   KLPS + +WSSD           M V++ F  +L + ++ND  +Q     E  DKL+KV P +  ++  F  ++   +  +I ESMI FKGRSSLKQ  P KPIKR YK+
Sbjct:   26 FQTNLYATQSEKNFNPISLKELATFLAINILMGIKKLPSYRDFWSSDELLHDNYVSKQMPVKS-FSWMLSHFHLNDNSLQPHRGDENFDKLYKVQPLLSHLSERFERVFRPGKCQAIDESMIKFKGRSSLKQYMPKKPIKRGYKV 169
[Close]
BLAST of EMLSAG00000002728 vs. Select Arthropod Genomes
Match: gb|KFM62189.1| (PiggyBac transposable element-derived protein 4, partial [Stegodyphus mimosarum])

HSP 1 Score: 66.2402 bits (160), Expect = 2.646e-12
Identity = 40/121 (33.06%), Postives = 59/121 (48.76%), Query Frame = 0 
Query:   65 ELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            E+ + LG   ++ Y+++P   HYWSS+  +          R+R   +L  L   + +    E   K + +   +  +   F      S + SI ESM  FKGRSSLKQ  PMKP+KR  KI
Sbjct:  166 EIMLVLGCMLVMSYNRVPKFSHYWSSNPSLGNVAIKNAISRDRCKTLLSKLYFAEPE--KPENASKTYYIDEVVSCLKQTFKQCRSESSYQSIDESMAKFKGRSSLKQYMPMKPVKRGIKI 284
[Close]
BLAST of EMLSAG00000002728 vs. Select Arthropod Genomes
Match: gb|EFA01453.1| (hypothetical protein TcasGA2_TC006999 [Tribolium castaneum])

HSP 1 Score: 65.855 bits (159), Expect = 3.790e-12
Identity = 45/128 (35.16%), Postives = 59/128 (46.09%), Query Frame = 0 
Query:   59 SSEIIK-ELFVFLGINYLIKYHKLPSLKHYWSSDMDVRN----------RFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            S  I K E+  F G+  L  Y  LP  + +W    D RN          RF QIL NL   D   + K + DK  KV P  D +NNNF       E  S+G+SM+ + G+   KQ    K I+  YK+
Sbjct:  316 SGNITKCEIKAFFGVLLLCGYVPLPRRQMFWEKSKDTRNDLVANAISRDRFEQILTNLQCCDNDHLDKNL-DKFTKVRPLFDKLNNNFRKFAPFCETHSVGKSMVPYFGKHRSKQFIKNKSIRYGYKM 442
[Close]
BLAST of EMLSAG00000002728 vs. Select Arthropod Genomes
Match: gb|KFM71075.1| (PiggyBac transposable element-derived protein 4, partial [Stegodyphus mimosarum])

HSP 1 Score: 62.3882 bits (150), Expect = 5.008e-11
Identity = 39/121 (32.23%), Postives = 59/121 (48.76%), Query Frame = 0 
Query:   65 ELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            E+ + LG+  ++ Y+++P+   YWSS+  +          RNR   +   +  ND +  +     K + +   +      FM     S   SI ESM  FKGRSSLKQ  P+KPIKR  K+
Sbjct:  103 EIMLVLGVMLVMSYNQVPNFSDYWSSNSSLGNEAIKNAISRNRCLLLFAKMYFNDPEKDANA--PKTYYMDEVVACFKKTFMQAREDSPFQSIDESMAKFKGRSSLKQYLPLKPIKRGIKV 221
[Close]
BLAST of EMLSAG00000002728 vs. Select Arthropod Genomes
Match: gb|KFM77809.1| (PiggyBac transposable element-derived protein 3, partial [Stegodyphus mimosarum])

HSP 1 Score: 61.2326 bits (147), Expect = 1.417e-10
Identity = 43/136 (31.62%), Postives = 61/136 (44.85%), Query Frame = 0 
Query:   49 SFYSNDDISNSSEIIKELFVFLGINYLIKYHKLPSLKHYWSSDMDVRNRFFQ----------ILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYK 174
            + Y++    N S    EL  FLGI +L  Y  +P  + +W    D +N FF           I  NL++ D   +  +  DK  K+ P I+ +N   M       H SI ESM+ + GR   KQ    KPI+  YK
Sbjct:   78 NLYASTKCVNLSLTNSELKCFLGIIFLSGYVSIPRRRMFWEQRTDSQNAFFSSAMRRDRFETIFSNLHVADNANL--DPLDKFAKLQPLINKLNELCMKFVPNETHFSIDESMVPYFGRHGCKQFIRGKPIRFGYK 211
[Close]
BLAST of EMLSAG00000002728 vs. Select Arthropod Genomes
Match: gb|KFM73190.1| (PiggyBac transposable element-derived protein 4, partial [Stegodyphus mimosarum])

HSP 1 Score: 60.8474 bits (146), Expect = 1.534e-10
Identity = 42/142 (29.58%), Postives = 69/142 (48.59%), Query Frame = 0 
Query:   46 IQDSFYSNDDISNSSEIIKELFVFLGINYLIKYHKLPS--LKHYWSSDMD---------VRNRFFQILRNLNINDIQTM-SKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            I++ F    D   ++E   E+  F+G+ YLI  HK     ++  W++D              RF+ +LR +  +DIQT  S++  DKL  +  F +    N    Y+V E+++I E +  F+GR   +Q  P KP K   K+
Sbjct:  141 IRERFSRERDAKETNEA--EIKAFIGLLYLIGLHKSSHVYIRDLWATDGTGIEIFRTTMSSTRFYFLLRCIRFDDIQTRKSRKELDKLAPIREFFENFVENCQKSYNVGEYVTIDEKLESFRGRCPFRQYMPKKPSKYGIKV 280
[Close]
BLAST of EMLSAG00000002728 vs. Select Arthropod Genomes
Match: gb|KFM77688.1| (PiggyBac transposable element-derived protein 3, partial [Stegodyphus mimosarum])

HSP 1 Score: 60.8474 bits (146), Expect = 1.605e-10
Identity = 39/118 (33.05%), Postives = 58/118 (49.15%), Query Frame = 0 
Query:   68 VFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
             FLGI     YHKLP    YW    D           RNR+ +I + ++ +D   + K   DK  KV P  D +NN+      +++ ++I E M+ + GR+SLK     KP+K  YK+
Sbjct:   97 TFLGILIFSGYHKLPRENMYWEKSPDCSTSIVSNSMSRNRYHEIKKYIHFSDNSHIEKN--DKYFKVRPLYDILNNSLNQFGVMAQQLTIDERMVKYFGRNSLKMYMKGKPVKFGYKL 212
[Close]
BLAST of EMLSAG00000002728 vs. Select Arthropod Genomes
Match: gb|KFM60418.1| (PiggyBac transposable element-derived protein 4, partial [Stegodyphus mimosarum])

HSP 1 Score: 60.8474 bits (146), Expect = 1.896e-10
Identity = 56/185 (30.27%), Postives = 81/185 (43.78%), Query Frame = 0 
Query:    5 LPDNFSDDTDIKEDLEEEESNVDINLVSEILPSVKETISNRIQDSFYSNDDISNSSEIIKELFVFLGINYLIKYHK-----LPSLKHYWSSDMDV------RNRFFQILRNL---NINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            LP N +   D+   ++      D N+++ I+      I + IQD F    D   + EI  E+  FLG+ YL   HK     L  L     + +D+      R RF  ++R L   NIND Q  S+   DKL  +  F +    N    Y   E ++I E +  F+GR   +Q  P KP K   KI
Sbjct:   95 LPGNTAYSRDVASSVDAWNVLFDSNMLNMIVKCTNIYIES-IQDRFTRERDAKKTDEI--EIKAFLGLLYLCGTHKSSHTNLKDLYATNGTGIDIFPKTMSRIRFLFLMRCLRFDNINDRQ--SRRGIDKLAPIRDFFETFVKNCKNAYTFGEFVTIHEKLEPFRGRCGFRQYMPKKPSKYGIKI 274
[Close]
BLAST of EMLSAG00000002728 vs. nr
Match: gi|1058187748|gb|JAS97522.1| (hypothetical protein g.59077, partial [Homalodisca liturata])

HSP 1 Score: 127.102 bits (318), Expect = 3.286e-33
Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 0 
Query:   65 ELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            EL  F+GIN+ + Y+ LPS +HYWS+  D+          RNRF  IL N++IND    S++ KDKL+K+ P ID++N++F+ +Y+V+  +++ ES ILFKGRS+LKQ NPMKPIKR YKI
Sbjct:   24 ELLSFIGINFFMGYNVLPSWRHYWSTSSDLGSTLVSNTMSRNRFDSILSNIHINDNDLRSRDCKDKLYKLRPMIDSLNDHFVQIYNVTRTVAVDESSILFKGRSTLKQYNPMKPIKRGYKI 144
[Close]
BLAST of EMLSAG00000002728 vs. nr
Match: gi|828217145|ref|XP_012560566.1| (PREDICTED: piggyBac transposable element-derived protein 3-like [Hydra vulgaris])

HSP 1 Score: 121.709 bits (304), Expect = 9.404e-31
Identity = 64/121 (52.89%), Postives = 82/121 (67.77%), Query Frame = 0 
Query:   65 ELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            ELF+FLGI  L+ YH LPSL  YW++  D+          R+RF QIL N++ ND  ++     DKL+K+ PFID +N NFM L++  E++SI ESM+LFK RSSL Q NPMKPIKR YKI
Sbjct:  141 ELFLFLGIIILMGYHSLPSLSCYWNNSQDLNVSLVSNSLSRSRFSQILGNIHSNDNNSIPSNNTDKLYKIRPFIDKLNENFMKLWNPREYMSIDESMVLFKDRSSLNQYNPMKPIKRGYKI 261
[Close]
BLAST of EMLSAG00000002728 vs. nr
Match: gi|985421435|ref|XP_015376132.1| (PREDICTED: piggyBac transposable element-derived protein 3-like [Diuraphis noxia])

HSP 1 Score: 111.694 bits (278), Expect = 2.139e-27
Identity = 60/140 (42.86%), Postives = 88/140 (62.86%), Query Frame = 0 
Query:   46 IQDSFYSNDDISNSSEIIKELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
             Q + Y+  + +N     KEL+ FLGIN+ + Y+KLPS K YW++  D+          R++F +IL N+++ND   +    KDKL+K+ P ID +N  F   Y+ +  +S+ ESMI FKGRS++KQ NPMKPIKR YK+
Sbjct:   25 FQSNLYATQNNNNLKLTEKELYAFLGINFCMGYNKLPSYKLYWNTSEDLHVRSISKAMYRDQFREILSNIHVNDNANLPNNNKDKLYKLRPMIDTLNKIFPKAYYGTRELSVDESMIKFKGRSTIKQYNPMKPIKRGYKL 164
[Close]
BLAST of EMLSAG00000002728 vs. nr
Match: gi|1009532710|ref|XP_015903453.1| (PREDICTED: piggyBac transposable element-derived protein 3-like [Parasteatoda tepidariorum])

HSP 1 Score: 110.923 bits (276), Expect = 2.916e-27
Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = 0 
Query:   75 LIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            L  YH+LP +++YWSSD+D           RNR+FQIL NL++ND + + K+  D+L+K+ PF+D +N NF  L    +  SI ESMILFK RS+LKQ NP KPIKR YK+
Sbjct:    2 LFSYHRLPRVRNYWSSDIDYSVPVVPDTLSRNRYFQILGNLHVNDNEVIPKQNTDRLYKIRPFMDKLNKNFQSLRMPHQTQSIDESMILFKDRSTLKQYNPKKPIKRGYKL 112
[Close]
BLAST of EMLSAG00000002728 vs. nr
Match: gi|1028671833|ref|XP_016655726.1| (PREDICTED: piggyBac transposable element-derived protein 3-like [Acyrthosiphon pisum])

HSP 1 Score: 116.701 bits (291), Expect = 3.900e-27
Identity = 57/121 (47.11%), Postives = 79/121 (65.29%), Query Frame = 0 
Query:   65 ELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            EL  F GIN+ + YHKLPS KHYW    D+          R+RF +IL N+++N+ + +S+  KDKL K+ P ID++N  F+     +  +S+ ESMI FKGRS++KQ NPMKPIKR YK+
Sbjct:  207 ELLSFFGINFCMGYHKLPSYKHYWKGAKDLNVPAISEVMTRDRFVEILSNIHVNNNENISQNKKDKLFKLRPMIDSLNQIFLESSSGTRELSVDESMIKFKGRSTIKQYNPMKPIKRGYKL 327
[Close]
BLAST of EMLSAG00000002728 vs. nr
Match: gi|985426090|ref|XP_015378553.1| (PREDICTED: piggyBac transposable element-derived protein 3-like, partial [Diuraphis noxia])

HSP 1 Score: 113.62 bits (283), Expect = 5.537e-27
Identity = 59/119 (49.58%), Postives = 80/119 (67.23%), Query Frame = 0 
Query:   63 IKELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKR 171
            I+EL  F+GIN+++ Y++LPS K YWS+  D+          R RF  IL  L+IN+    + + KDKL K+ P +D+IN  FM LY V+  +S+ ESM+LFKGRSS+KQ NPMKPIKR
Sbjct:  129 IEELKAFIGINFVMGYNRLPSWKDYWSTSNDLGVKIISDAMSRKRFDDILCFLHINNNNAKTSDNKDKLFKLRPLLDSINIRFMELYKVTREVSVDESMVLFKGRSSIKQYNPMKPIKR 247
[Close]
BLAST of EMLSAG00000002728 vs. nr
Match: gi|641655294|ref|XP_008179537.1| (PREDICTED: piggyBac transposable element-derived protein 3-like [Acyrthosiphon pisum])

HSP 1 Score: 114.005 bits (284), Expect = 7.104e-27
Identity = 59/121 (48.76%), Postives = 77/121 (63.64%), Query Frame = 0 
Query:   65 ELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            E+  F+GIN+L+ Y+KLPS KHYW++  D+          RNRF  IL NL++ D   + K  KDKL K+ P I+  N  F   YH +  +SI ESMI+FKGR+ +KQ NP KPIKR YKI
Sbjct:  122 EILNFIGINFLMGYNKLPSWKHYWATSDDLNVSCVSNTMSRNRFDNILSNLHVQDNLLIPKNNKDKLFKLRPLINYCNEIFSTSYHGTRELSIDESMIIFKGRNCMKQYNPQKPIKRGYKI 242
[Close]
BLAST of EMLSAG00000002728 vs. nr
Match: gi|1067104112|ref|XP_018013422.1| (PREDICTED: piggyBac transposable element-derived protein 4-like isoform X2 [Hyalella azteca])

HSP 1 Score: 106.686 bits (265), Expect = 1.070e-23
Identity = 50/123 (40.65%), Postives = 79/123 (64.23%), Query Frame = 0 
Query:   63 IKELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            + E+  FLGIN ++ Y++ P++  YW +  D+          R+RF++IL +L++ND   M++   DKL+KV P +  +   F ++    EH+S+G+ +I FKGRSSLKQ NP+KPIKR YK+
Sbjct:  230 VDEIKTFLGINIVMGYNRCPTINSYWMTGDDIGVQCIKEAMSRDRFYKILHHLHLNDNSKMNRSKADKLYKVRPLLKILKQKFEVMRGPQEHLSVGKLIIKFKGRSSLKQYNPLKPIKRGYKV 352
[Close]
BLAST of EMLSAG00000002728 vs. nr
Match: gi|1067104110|ref|XP_018013421.1| (PREDICTED: piggyBac transposable element-derived protein 4-like isoform X1 [Hyalella azteca])

HSP 1 Score: 106.686 bits (265), Expect = 1.125e-23
Identity = 50/123 (40.65%), Postives = 79/123 (64.23%), Query Frame = 0 
Query:   63 IKELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            + E+  FLGIN ++ Y++ P++  YW +  D+          R+RF++IL +L++ND   M++   DKL+KV P +  +   F ++    EH+S+G+ +I FKGRSSLKQ NP+KPIKR YK+
Sbjct:  232 VDEIKTFLGINIVMGYNRCPTINSYWMTGDDIGVQCIKEAMSRDRFYKILHHLHLNDNSKMNRSKADKLYKVRPLLKILKQKFEVMRGPQEHLSVGKLIIKFKGRSSLKQYNPLKPIKRGYKV 354
[Close]
BLAST of EMLSAG00000002728 vs. nr
Match: gi|1067104926|ref|XP_018013423.1| (PREDICTED: piggyBac transposable element-derived protein 4-like isoform X3 [Hyalella azteca])

HSP 1 Score: 105.916 bits (263), Expect = 1.717e-23
Identity = 50/123 (40.65%), Postives = 79/123 (64.23%), Query Frame = 0 
Query:   63 IKELFVFLGINYLIKYHKLPSLKHYWSSDMDV----------RNRFFQILRNLNINDIQTMSKEIKDKLHKVXPFIDAINNNFMMLYHVSEHISIGESMILFKGRSSLKQSNPMKPIKREYKI 175
            + E+  FLGIN ++ Y++ P++  YW +  D+          R+RF++IL +L++ND   M++   DKL+KV P +  +   F ++    EH+S+G+ +I FKGRSSLKQ NP+KPIKR YK+
Sbjct:  147 VDEIKTFLGINIVMGYNRCPTINSYWMTGDDIGVQCIKEAMSRDRFYKILHHLHLNDNSKMNRSKADKLYKVRPLLKILKQKFEVMRGPQEHLSVGKLIIKFKGRSSLKQYNPLKPIKRGYKV 269
The following BLAST results are available for this feature:
BLAST of EMLSAG00000002728 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 1
Match NameE-valueIdentityDescription
-3.784e-729.20symbol:si:ch211-255f4.7 "si:ch211-255f4.7" species... [more]
back to top
BLAST of EMLSAG00000002728 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 1
Match NameE-valueIdentityDescription
gi|592790474|gb|GAXK01164094.1|7.360e+040.74TSA: Calanus finmarchicus comp5986333_c0_seq1 tran... [more]
back to top
BLAST of EMLSAG00000002728 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000027281.672e-122100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1575:2347... [more]
EMLSAP000000066001.316e-730.84pep:novel supercontig:LSalAtl2s:LSalAtl2s363:46981... [more]
back to top
BLAST of EMLSAG00000002728 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
gi|296439278|sp|Q8N328.3|PGBD3_HUMAN2.283e-730.83RecName: Full=PiggyBac transposable element-derive... [more]
gi|74749095|sp|Q6P3X8.1|PGBD2_HUMAN9.381e-731.25RecName: Full=PiggyBac transposable element-derive... [more]
back to top
BLAST of EMLSAG00000002728 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 25
Match NameE-valueIdentityDescription
gb|KFM78273.1|3.442e-2342.03PiggyBac transposable element-derived protein 4, p... [more]
gb|KFM62055.1|7.134e-2042.52PiggyBac transposable element-derived protein 4, p... [more]
gb|KFM77001.1|8.055e-1839.31PiggyBac transposable element-derived protein 4, p... [more]
gb|KFM62189.1|2.646e-1233.06PiggyBac transposable element-derived protein 4, p... [more]
gb|EFA01453.1|3.790e-1235.16hypothetical protein TcasGA2_TC006999 [Tribolium c... [more]
gb|KFM71075.1|5.008e-1132.23PiggyBac transposable element-derived protein 4, p... [more]
gb|KFM77809.1|1.417e-1031.62PiggyBac transposable element-derived protein 3, p... [more]
gb|KFM73190.1|1.534e-1029.58PiggyBac transposable element-derived protein 4, p... [more]
gb|KFM77688.1|1.605e-1033.05PiggyBac transposable element-derived protein 3, p... [more]
gb|KFM60418.1|1.896e-1030.27PiggyBac transposable element-derived protein 4, p... [more]

Pages

back to top
BLAST of EMLSAG00000002728 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|1058187748|gb|JAS97522.1|3.286e-3350.41hypothetical protein g.59077, partial [Homalodisca... [more]
gi|828217145|ref|XP_012560566.1|9.404e-3152.89PREDICTED: piggyBac transposable element-derived p... [more]
gi|985421435|ref|XP_015376132.1|2.139e-2742.86PREDICTED: piggyBac transposable element-derived p... [more]
gi|1009532710|ref|XP_015903453.1|2.916e-2750.45PREDICTED: piggyBac transposable element-derived p... [more]
gi|1028671833|ref|XP_016655726.1|3.900e-2747.11PREDICTED: piggyBac transposable element-derived p... [more]
gi|985426090|ref|XP_015378553.1|5.537e-2749.58PREDICTED: piggyBac transposable element-derived p... [more]
gi|641655294|ref|XP_008179537.1|7.104e-2748.76PREDICTED: piggyBac transposable element-derived p... [more]
gi|1067104112|ref|XP_018013422.1|1.070e-2340.65PREDICTED: piggyBac transposable element-derived p... [more]
gi|1067104110|ref|XP_018013421.1|1.125e-2340.65PREDICTED: piggyBac transposable element-derived p... [more]
gi|1067104926|ref|XP_018013423.1|1.717e-2340.65PREDICTED: piggyBac transposable element-derived p... [more]

Pages

back to top
BLAST of EMLSAG00000002728 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1575supercontigLSalAtl2s1575:23470..24214 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1575-snap-gene-0.7
Biotypeprotein_coding
EvidenceIEA
NotePiggyBac transposable element-derived protein 3
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000002728 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000002728EMLSAT00000002728-698575Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1575:23470..24214-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000002728-685494 ID=EMLSAG00000002728-685494|Name=EMLSAG00000002728|organism=Lepeophtheirus salmonis|type=gene|length=745bp|location=Sequence derived from alignment at LSalAtl2s1575:23470..24214- (Lepeophtheirus salmonis)
ATGCTTATGAGTCTACCTGACAACTTTTCTGATGATACGGACATAAAAGA
AGACTTAGAAGAGGAGGAATCAAATGTCGATATAAATCTAGTATCTGAAA
TTCTTCCCTCAGTCAAAGAGACTATATCAAACAGGATTCAAGATTCCTTC
TATTCAAATGATGATATCTCAAATAGTTCTGAAATTATTAGTCAATGCAG
AAATATTAATTGAAAAAAGGGCAAAAAAGAAGAAACGCGGACTCATTTCC
ACCTTCTGCAAGGTCCTCTTAACGAATTTTCACTGATTCTATGGATGAGA
TCGAAGTTTTTCTTAAATTTGTTAATCAAGATATTTGAATTTTTTTTTAT
TTCAAACCAACTTATTCATCAATCAAAATTAGAATAAAATATTATATGTA
ACAACAGAGGAACTATTTGTTTTCTTAGGAATCAATTATTTGATAAAATA
CCATAAATTACCGTCCTTAAAACATTATTGGTCTTCAGATATGGATGTAA
GGAATAGATTCTTTCAAATTTTACGAAATTTAAATATCAATGATATTCAA
ACTATGTCAAAGGAGATTAAAGATAAGCTGCATAAAGTAAAMCCTTTTAT
CGATGCTATTAATAACAATTTTATGATGCTCTATCATGTTAGTGAGCATA
TCAGTATTGGTGAAAGCATGATATTGTTCAAAGGACGTAGCTCACTAAAA
CAATCTAATCCCATGAAACCAATCAAACGTGAGTATAAAATATAA
back to top
Add to Basket