EMLSAG00000003169, EMLSAG00000003169-685935 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003169
Unique NameEMLSAG00000003169-685935
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000003169 vs. GO
Match: - (symbol:INTS6 "cDNA FLJ45485 fis, clone BRTHA2002661, highly similar to Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] GO:GO:0005634 GO:GO:0015629 EMBL:CH471075 HOGENOM:HOG000015308 HOVERGEN:HBG081468 KO:K13143 EMBL:AL354820 EMBL:AL137780 UniGene:Hs.439440 GeneID:26512 KEGG:hsa:26512 CTD:26512 HGNC:HGNC:14879 ChiTaRS:INTS6 EMBL:AK074946 EMBL:AK096696 EMBL:AK128795 RefSeq:XP_005266397.1 Ensembl:ENST00000497989 NextBio:35469368 Uniprot:B3KQH5)

HSP 1 Score: 48.1358 bits (113), Expect = 4.626e-6
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKT 56
            MP YY G L+KA+  MGA NL    I DS++  LS  V +YLK+   QAK+E D+ 
Sbjct:  241 MPPYYLGPLKKAVRMMGAPNL----IADSMEYGLSYSVISYLKKLSQQAKIESDRV 292
[Close]
BLAST of EMLSAG00000003169 vs. GO
Match: - (symbol:INTS6 "Integrator complex subunit 6" species:9606 "Homo sapiens" [GO:0004888 "transmembrane signaling receptor activity" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS] [GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0016180 "snRNA processing" evidence=IDA] [GO:0032039 "integrator complex" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] GO:GO:0015629 GO:GO:0004888 Gene3D:3.40.50.410 InterPro:IPR002035 SMART:SM00327 PROSITE:PS50234 GO:GO:0032039 eggNOG:NOG276796 HOGENOM:HOG000015308 HOVERGEN:HBG081468 OrthoDB:EOG7ZGX2C TreeFam:TF323386 GO:GO:0016180 KO:K13143 EMBL:AF097645 EMBL:AL833524 EMBL:AL354820 EMBL:AL137780 EMBL:BC013358 EMBL:BC018725 EMBL:BC032386 EMBL:BC039829 EMBL:AF141326 EMBL:AL117626 EMBL:BK005730 PIR:T17330 RefSeq:NP_001035026.1 RefSeq:NP_001035027.1 RefSeq:NP_036273.1 RefSeq:XP_005266396.1 UniGene:Hs.439440 ProteinModelPortal:Q9UL03 SMR:Q9UL03 BioGrid:117717 DIP:DIP-38627N IntAct:Q9UL03 MINT:MINT-4541530 STRING:9606.ENSP00000310260 PhosphoSite:Q9UL03 DMDM:74753376 PaxDb:Q9UL03 PRIDE:Q9UL03 Ensembl:ENST00000311234 Ensembl:ENST00000398119 Ensembl:ENST00000442263 GeneID:26512 KEGG:hsa:26512 UCSC:uc001vfi.3 UCSC:uc001vfm.2 CTD:26512 GeneCards:GC13M051928 HGNC:HGNC:14879 HPA:HPA001552 HPA:HPA001846 MIM:604331 neXtProt:NX_Q9UL03 PharmGKB:PA27212 InParanoid:Q9UL03 OMA:EQCAEEN PhylomeDB:Q9UL03 ChiTaRS:INTS6 GeneWiki:INTS6 GenomeRNAi:26512 NextBio:48812 PRO:PR:Q9UL03 ArrayExpress:Q9UL03 Bgee:Q9UL03 CleanEx:HS_INTS6 Genevestigator:Q9UL03 Uniprot:Q9UL03)

HSP 1 Score: 48.1358 bits (113), Expect = 4.835e-6
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKT 56
            MP YY G L+KA+  MGA NL    I DS++  LS  V +YLK+   QAK+E D+ 
Sbjct:  419 MPPYYLGPLKKAVRMMGAPNL----IADSMEYGLSYSVISYLKKLSQQAKIESDRV 470
[Close]
BLAST of EMLSAG00000003169 vs. GO
Match: - (symbol:Ints6 "integrator complex subunit 6" species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO] [GO:0032039 "integrator complex" evidence=ISO] MGI:MGI:1202397 GO:GO:0015629 Gene3D:3.40.50.410 InterPro:IPR002035 SMART:SM00327 PROSITE:PS50234 GO:GO:0032039 eggNOG:NOG276796 GeneTree:ENSGT00390000016655 HOGENOM:HOG000015308 HOVERGEN:HBG081468 OrthoDB:EOG7ZGX2C TreeFam:TF323386 GO:GO:0016180 KO:K13143 CTD:26512 OMA:EQCAEEN ChiTaRS:INTS6 EMBL:AK046055 EMBL:AK172178 EMBL:BC058637 EMBL:BC059263 EMBL:U57368 PIR:T30176 RefSeq:NP_032741.2 RefSeq:XP_006518745.1 UniGene:Mm.319684 UniGene:Mm.441110 ProteinModelPortal:Q6PCM2 SMR:Q6PCM2 BioGrid:201810 IntAct:Q6PCM2 MINT:MINT-4109478 STRING:10090.ENSMUSP00000086788 PhosphoSite:Q6PCM2 PaxDb:Q6PCM2 PRIDE:Q6PCM2 Ensembl:ENSMUST00000053959 GeneID:18130 KEGG:mmu:18130 UCSC:uc007ugp.2 UCSC:uc007ugr.1 UCSC:uc007ugu.1 InParanoid:Q6PCM2 NextBio:293364 PRO:PR:Q6PCM2 Bgee:Q6PCM2 CleanEx:MM_INTS6 Genevestigator:Q6PCM2 Uniprot:Q6PCM2)

HSP 1 Score: 48.1358 bits (113), Expect = 4.873e-6
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKT 56
            MP YY G L+KA+  MGA NL    I DS++  LS  V +YLK+   QAK+E D+ 
Sbjct:  419 MPPYYLGPLKKAVRMMGAPNL----IADSMEYGLSYSVISYLKKLSQQAKIESDRV 470
[Close]
BLAST of EMLSAG00000003169 vs. GO
Match: - (symbol:INTS6 "Integrator complex subunit 6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] GO:GO:0005634 GO:GO:0015629 EMBL:CH471075 EMBL:AL354820 EMBL:AL137780 UniGene:Hs.439440 HGNC:HGNC:14879 ChiTaRS:INTS6 ProteinModelPortal:G5E9X1 Ensembl:ENST00000490542 NextBio:35518258 ArrayExpress:G5E9X1 Uniprot:G5E9X1)

HSP 1 Score: 47.7506 bits (112), Expect = 4.891e-6
Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSS 59
            MP YY G L+KA+  MGA NL    I DS++  LS  V +YLK+   QAK+E D+   S
Sbjct:  103 MPPYYLGPLKKAVRMMGAPNL----IADSMEYGLSYSVISYLKKLSQQAKIESDRVIGS 157
[Close]
BLAST of EMLSAG00000003169 vs. GO
Match: - (symbol:INTS6 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0016180 "snRNA processing" evidence=IEA] [GO:0032039 "integrator complex" evidence=IEA] GO:GO:0015629 GO:GO:0032039 GeneTree:ENSGT00390000016655 TreeFam:TF323386 GO:GO:0016180 OMA:EQCAEEN EMBL:AAEX03013062 EMBL:AAEX03013063 EMBL:AAEX03013064 EMBL:AAEX03013065 Ensembl:ENSCAFT00000030029 Uniprot:F1PKG3)

HSP 1 Score: 48.1358 bits (113), Expect = 5.048e-6
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKT 56
            MP YY G L+KA+  MGA NL    I DS++  LS  V +YLK+   QAK+E D+ 
Sbjct:  353 MPPYYLGPLKKAVRMMGAPNL----IADSMEYGLSYSVISYLKKLSQQAKIESDRV 404
[Close]
BLAST of EMLSAG00000003169 vs. GO
Match: - (symbol:INTS6 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0016180 "snRNA processing" evidence=IEA] [GO:0032039 "integrator complex" evidence=IEA] GO:GO:0015629 GO:GO:0032039 GeneTree:ENSGT00390000016655 OrthoDB:EOG7ZGX2C TreeFam:TF323386 GO:GO:0016180 OMA:EQCAEEN EMBL:DAAA02032953 EMBL:DAAA02032954 EMBL:DAAA02032955 Ensembl:ENSBTAT00000003868 Uniprot:E1BF57)

HSP 1 Score: 48.1358 bits (113), Expect = 5.091e-6
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKT 56
            MP YY G L+KA+  MGA NL    I DS++  LS  V +YLK+   QAK+E D+ 
Sbjct:  411 MPPYYLGPLKKAVRMMGAPNL----IADSMEYGLSYSVISYLKKLSQQAKIESDRV 462
[Close]
BLAST of EMLSAG00000003169 vs. GO
Match: - (symbol:INTS6 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0016180 "snRNA processing" evidence=IEA] [GO:0032039 "integrator complex" evidence=IEA] GO:GO:0015629 GO:GO:0032039 GeneTree:ENSGT00390000016655 OrthoDB:EOG7ZGX2C TreeFam:TF323386 GO:GO:0016180 OMA:EQCAEEN EMBL:CU041247 Ensembl:ENSSSCT00000010282 Uniprot:F1RK31)

HSP 1 Score: 48.1358 bits (113), Expect = 5.137e-6
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKT 56
            MP YY G L+KA+  MGA NL    I DS++  LS  V +YLK+   QAK+E D+ 
Sbjct:  411 MPPYYLGPLKKAVRMMGAPNL----IADSMEYGLSYSVISYLKKLSQQAKIESDRV 462
[Close]
BLAST of EMLSAG00000003169 vs. GO
Match: - (symbol:INTS6 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0016180 "snRNA processing" evidence=IEA] [GO:0032039 "integrator complex" evidence=IEA] GO:GO:0032039 GeneTree:ENSGT00390000016655 OrthoDB:EOG7ZGX2C TreeFam:TF323386 GO:GO:0016180 EMBL:AADN03001259 Ensembl:ENSGALT00000027488 NextBio:20822009 PRO:PR:E1BV07 Uniprot:E1BV07)

HSP 1 Score: 46.595 bits (109), Expect = 1.327e-5
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKT 56
            MP YY G L+KA+  MGA NL    I D+++  LS  V +YLK+   QAK+E D+ 
Sbjct:  346 MPPYYLGPLKKAVRMMGAPNL----IADNVEYGLSYSVISYLKKLSQQAKIESDRV 397
[Close]
BLAST of EMLSAG00000003169 vs. GO
Match: - (symbol:ddx26b "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B" species:7955 "Danio rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus" evidence=IEA] ZFIN:ZDB-GENE-040426-1150 GO:GO:0005634 Gene3D:3.40.50.410 InterPro:IPR002035 SMART:SM00327 PROSITE:PS50234 CTD:203522 eggNOG:NOG276796 HOGENOM:HOG000015308 HOVERGEN:HBG081468 EMBL:BC054905 RefSeq:NP_956728.1 UniGene:Dr.82458 ProteinModelPortal:Q7SYD9 STRING:7955.ENSDARP00000026435 PRIDE:Q7SYD9 GeneID:393406 KEGG:dre:393406 InParanoid:Q7SYD9 KO:K13143 NextBio:20814450 PRO:PR:Q7SYD9 Uniprot:Q7SYD9)

HSP 1 Score: 45.8246 bits (107), Expect = 2.945e-5
Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDK 55
            MP YY   L+KAL  MGA NL    I D++D  LS  V +YLK+   QAK+E D+
Sbjct:  423 MPPYYLLPLKKALRMMGAPNL----ISDNMDCGLSYSVISYLKKLSQQAKIESDR 473
[Close]
BLAST of EMLSAG00000003169 vs. C. finmarchicus
Match: gi|592776710|gb|GAXK01177858.1| (TSA: Calanus finmarchicus comp14041_c9_seq7 transcribed RNA sequence)

HSP 1 Score: 87.0409 bits (214), Expect = 3.201e-21
Identity = 51/88 (57.95%), Postives = 61/88 (69.32%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKGIVP--------RSPLRKELLFS 80
            MPTYYAG LR+AL RMGAGNLA +LIP+++DN LS  V  YLKR KNQAKLEYD+  S +  P KG V         RS L++EL+ S
Sbjct:  291 MPTYYAGPLRRALSRMGAGNLASTLIPEAMDNSLSYSVLNYLKRLKNQAKLEYDRIVSVT--PYKGKVGPDGIKVNVRSQLKRELMDS 548
[Close]
BLAST of EMLSAG00000003169 vs. C. finmarchicus
Match: gi|592776711|gb|GAXK01177857.1| (TSA: Calanus finmarchicus comp14041_c9_seq6 transcribed RNA sequence)

HSP 1 Score: 87.0409 bits (214), Expect = 4.913e-21
Identity = 51/88 (57.95%), Postives = 61/88 (69.32%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKGIVP--------RSPLRKELLFS 80
            MPTYYAG LR+AL RMGAGNLA +LIP+++DN LS  V  YLKR KNQAKLEYD+  S +  P KG V         RS L++EL+ S
Sbjct:  291 MPTYYAGPLRRALSRMGAGNLASTLIPEAMDNSLSYSVLNYLKRLKNQAKLEYDRIVSVT--PYKGKVGPDGIKVNVRSQLKRELMDS 548
[Close]
BLAST of EMLSAG00000003169 vs. C. finmarchicus
Match: gi|592776722|gb|GAXK01177846.1| (TSA: Calanus finmarchicus comp14041_c7_seq6 transcribed RNA sequence)

HSP 1 Score: 86.6557 bits (213), Expect = 1.342e-20
Identity = 51/88 (57.95%), Postives = 61/88 (69.32%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKGIVP--------RSPLRKELLFS 80
            MPTYYAG LR+AL RMGAGNLA +LIP+++DN LS  V  YLKR KNQAKLEYD+  S +  P KG V         RS L++EL+ S
Sbjct:  303 MPTYYAGPLRRALSRMGAGNLASTLIPEAMDNSLSYSVLNYLKRLKNQAKLEYDRIVSVT--PYKGKVGPDGIKVNVRSQLKRELMDS 560
[Close]
BLAST of EMLSAG00000003169 vs. C. finmarchicus
Match: gi|592776723|gb|GAXK01177845.1| (TSA: Calanus finmarchicus comp14041_c7_seq5 transcribed RNA sequence)

HSP 1 Score: 87.0409 bits (214), Expect = 1.523e-20
Identity = 51/88 (57.95%), Postives = 61/88 (69.32%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKGIVP--------RSPLRKELLFS 80
            MPTYYAG LR+AL RMGAGNLA +LIP+++DN LS  V  YLKR KNQAKLEYD+  S +  P KG V         RS L++EL+ S
Sbjct:  415 MPTYYAGPLRRALSRMGAGNLASTLIPEAMDNSLSYSVLNYLKRLKNQAKLEYDRIVSVT--PYKGKVGPDGIKVNVRSQLKRELMDS 672
[Close]
BLAST of EMLSAG00000003169 vs. C. finmarchicus
Match: gi|592776725|gb|GAXK01177843.1| (TSA: Calanus finmarchicus comp14041_c7_seq3 transcribed RNA sequence)

HSP 1 Score: 87.0409 bits (214), Expect = 3.583e-20
Identity = 51/88 (57.95%), Postives = 61/88 (69.32%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKGIVP--------RSPLRKELLFS 80
            MPTYYAG LR+AL RMGAGNLA +LIP+++DN LS  V  YLKR KNQAKLEYD+  S +  P KG V         RS L++EL+ S
Sbjct:  303 MPTYYAGPLRRALSRMGAGNLASTLIPEAMDNSLSYSVLNYLKRLKNQAKLEYDRIVSVT--PYKGKVGPDGIKVNVRSQLKRELMDS 560
[Close]
BLAST of EMLSAG00000003169 vs. C. finmarchicus
Match: gi|592776726|gb|GAXK01177842.1| (TSA: Calanus finmarchicus comp14041_c7_seq2 transcribed RNA sequence)

HSP 1 Score: 87.0409 bits (214), Expect = 4.038e-20
Identity = 51/88 (57.95%), Postives = 61/88 (69.32%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKGIVP--------RSPLRKELLFS 80
            MPTYYAG LR+AL RMGAGNLA +LIP+++DN LS  V  YLKR KNQAKLEYD+  S +  P KG V         RS L++EL+ S
Sbjct:  415 MPTYYAGPLRRALSRMGAGNLASTLIPEAMDNSLSYSVLNYLKRLKNQAKLEYDRIVSVT--PYKGKVGPDGIKVNVRSQLKRELMDS 672
[Close]
BLAST of EMLSAG00000003169 vs. C. finmarchicus
Match: gi|592844082|gb|GAXK01113462.1| (TSA: Calanus finmarchicus comp95099_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.4906 bits (62), Expect = 4.311e+0
Identity = 18/56 (32.14%), Postives = 31/56 (55.36%), Query Frame = 0 
Query:   14 LRMGAGNLAISLIP--DSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKGI 67
            ++ G G  ++S IP  DS D   +    +++ R+   A++   +T SSSS P KG+
Sbjct:  924 VQSGLGPFSVSSIPE*DSPDTTQTPSAMSHMDRYL--ARMSLHQTGSSSSFPMKGV 1085
[Close]
BLAST of EMLSAG00000003169 vs. C. finmarchicus
Match: gi|592776719|gb|GAXK01177849.1| (TSA: Calanus finmarchicus comp14041_c7_seq9 transcribed RNA sequence)

HSP 1 Score: 27.335 bits (59), Expect = 9.357e+0
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 0 
Query:    1 MPTYYAGSLRKAL 13
            MPTYYAG LR+AL
Sbjct:    6 MPTYYAGPLRRAL 44
[Close]
BLAST of EMLSAG00000003169 vs. L. salmonis peptides
Match: EMLSAP00000003169 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1769:18358:18678:1 gene:EMLSAG00000003169 transcript:EMLSAT00000003169 description:"augustus_masked-LSalAtl2s1769-processed-gene-0.0")

HSP 1 Score: 219.935 bits (559), Expect = 5.487e-75
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKGIVPRSPLRKELLFSSFPQYKVVHSQAIDRFFWLYFRMQGD 106
            MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKGIVPRSPLRKELLFSSFPQYKVVHSQAIDRFFWLYFRMQGD
Sbjct:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKGIVPRSPLRKELLFSSFPQYKVVHSQAIDRFFWLYFRMQGD 106
[Close]
BLAST of EMLSAG00000003169 vs. L. salmonis peptides
Match: EMLSAP00000008481 (pep:novel supercontig:LSalAtl2s:LSalAtl2s51:917098:919923:1 gene:EMLSAG00000008481 transcript:EMLSAT00000008481 description:"augustus_masked-LSalAtl2s51-processed-gene-9.2")

HSP 1 Score: 145.976 bits (367), Expect = 1.786e-41
Identity = 78/101 (77.23%), Postives = 84/101 (83.17%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKG-----IVPRSPLRKELLFSSFPQYKVVHS--QAID 94
            MP+YYAG LRKAL+RMGAGNLA+SLIP+SLDNCLS RVTTYLKR KNQAKLEYDKT SS+ + R G     IVPRSPLRKELL SSFPQ KVVHS  Q ID
Sbjct:  441 MPSYYAGPLRKALIRMGAGNLAMSLIPESLDNCLSYRVTTYLKRLKNQAKLEYDKTLSSTPIQRNGIENLNIVPRSPLRKELLLSSFPQNKVVHSRDQLID 541
[Close]
BLAST of EMLSAG00000003169 vs. L. salmonis peptides
Match: EMLSAP00000001053 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1173:43730:64482:1 gene:EMLSAG00000001053 transcript:EMLSAT00000001053 description:"snap_masked-LSalAtl2s1173-processed-gene-0.12")

HSP 1 Score: 137.502 bits (345), Expect = 1.468e-38
Identity = 74/101 (73.27%), Postives = 82/101 (81.19%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRK-----GIVPRSPLRKELLFSSFPQYKVVHSQAIDRF 96
            MP+YYAG LRKAL RMGAGNLA+SLIPDSLDNCLS  V+TYLKR KNQAKLEYDKT SS+ + R       IVPRSPL+KELL SSFPQ KVVHS+  D+F
Sbjct:  349 MPSYYAGPLRKALTRMGAGNLALSLIPDSLDNCLSYTVSTYLKRLKNQAKLEYDKTLSSTPVQRNRIENLKIVPRSPLKKELLLSSFPQDKVVHSR--DQF 447
[Close]
BLAST of EMLSAG00000003169 vs. SwissProt
Match: gi|126258172|sp|Q2TAF4.1|INT6A_XENLA (RecName: Full=Integrator complex subunit 6-A; Short=Int6-A)

HSP 1 Score: 51.6026 bits (122), Expect = 1.049e-7
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKT 56
            MP YY G L+KAL  MGA NL    +PDS++  LS  V +YLK+   QAK+E D+ 
Sbjct:  419 MPPYYIGPLKKALRMMGAPNL----MPDSMEYGLSYSVVSYLKKLSQQAKVESDRV 470
[Close]
BLAST of EMLSAG00000003169 vs. SwissProt
Match: gi|82180065|sp|Q5U4W6.1|INT6B_XENLA (RecName: Full=Integrator complex subunit 6-B; Short=Int6-B)

HSP 1 Score: 49.6766 bits (117), Expect = 4.558e-7
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKT 56
            MP YY G L+KAL  MG  NL    +PDS++  LS  V +YLK+   QAK+E D+ 
Sbjct:  419 MPPYYIGPLKKALRMMGTPNL----MPDSMEYGLSYSVVSYLKKLSQQAKVESDRV 470
[Close]
BLAST of EMLSAG00000003169 vs. Select Arthropod Genomes
Match: EFX73352.1 (hypothetical protein DAPPUDRAFT_188894 [Daphnia pulex])

HSP 1 Score: 79.7221 bits (195), Expect = 5.915e-18
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKGIV------PRSPLRKELL 78
            MP YYA  LR+AL RMGA NLA +LIP+SLDN LS  +  YLKR K+QAK+E+D+  S     R+ +V      PRS  RK+ +
Sbjct:  426 MPPYYAAPLRRALTRMGAPNLASTLIPESLDNNLSYSIVNYLKRLKHQAKVEFDRVCSEVGRTRQVVVDSIKVIPRSAFRKDFI 509
[Close]
BLAST of EMLSAG00000003169 vs. Select Arthropod Genomes
Match: XP_006564516.1 (PREDICTED: integrator complex subunit 6 isoform X1 [Apis mellifera])

HSP 1 Score: 75.0998 bits (183), Expect = 2.440e-16
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGA-GNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDK-------------------TPSSSSLPRKG--IVPRSPLRKELL 78
            MPTYYA SLR+AL RMGA   LA +LIPD++DN LS  V  YLKR KNQAK+E+D+                      S++   +G  + PR+PL+K+L+
Sbjct:  451 MPTYYAASLRRALTRMGAPAPLAQTLIPDNMDNSLSYSVLNYLKRLKNQAKIEFDRLCNEVLSKQLATANMTKNLVNGSTTTVTEGVRVTPRTPLKKDLV 550
[Close]
BLAST of EMLSAG00000003169 vs. Select Arthropod Genomes
Match: XP_395179.2 (PREDICTED: integrator complex subunit 6 isoform X2 [Apis mellifera])

HSP 1 Score: 75.0998 bits (183), Expect = 2.511e-16
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGA-GNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDK-------------------TPSSSSLPRKG--IVPRSPLRKELL 78
            MPTYYA SLR+AL RMGA   LA +LIPD++DN LS  V  YLKR KNQAK+E+D+                      S++   +G  + PR+PL+K+L+
Sbjct:  441 MPTYYAASLRRALTRMGAPAPLAQTLIPDNMDNSLSYSVLNYLKRLKNQAKIEFDRLCNEVLSKQLATANMTKNLVNGSTTTVTEGVRVTPRTPLKKDLV 540
[Close]
BLAST of EMLSAG00000003169 vs. Select Arthropod Genomes
Match: EFX66579.1 (hypothetical protein DAPPUDRAFT_331956 [Daphnia pulex])

HSP 1 Score: 73.559 bits (179), Expect = 9.856e-16
Identity = 42/86 (48.84%), Postives = 54/86 (62.79%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRK--------GIVPRSPLRKELL 78
            MP YYA  LR+AL RMGA NLA +LIP+SLDN LS  +  YLKR K+QAK+E+D+    S L R          ++PRS   K+ +
Sbjct:  422 MPPYYATPLRRALTRMGATNLASTLIPESLDNYLSYSIVNYLKRLKHQAKVEFDRV--CSELGRTPQVVVDSIEVIPRSAFCKDFI 505
[Close]
BLAST of EMLSAG00000003169 vs. Select Arthropod Genomes
Match: gb|EEC07918.1| (dice1/dead/H box polypeptide, putative, partial [Ixodes scapularis])

HSP 1 Score: 70.4774 bits (171), Expect = 9.005e-15
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDK 55
            MP YYAG L++AL RMGA NL    +PDS++NCLS  V  YLKR KNQAK EY+K
Sbjct:  339 MPLYYAGPLKRALQRMGAHNL----VPDSMENCLSYTVLNYLKRLKNQAKAEYEK 389
[Close]
BLAST of EMLSAG00000003169 vs. Select Arthropod Genomes
Match: gb|KFM66593.1| (Integrator complex subunit 6, partial [Stegodyphus mimosarum])

HSP 1 Score: 66.2402 bits (160), Expect = 5.652e-14
Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSS 59
            MP YYA  L++AL RMGA NL    +PD+++NCLS  V  YLKR KNQAK E++K  S+
Sbjct:    1 MPLYYAAPLKRALQRMGAPNL----VPDTMENCLSYNVLNYLKRLKNQAKTEFEKLIST 55
[Close]
BLAST of EMLSAG00000003169 vs. Select Arthropod Genomes
Match: gb|EFA02055.1| (Integrator complex subunit 6-A-like Protein [Tribolium castaneum])

HSP 1 Score: 64.6994 bits (156), Expect = 1.042e-12
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAG-NLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKG------------IVPRSPLRKELL 78
            +P YYAG LR+AL RMG    LA +LIP++ +N LS  V+ YLKR KNQAK+EYDK  S  +L +              ++P+  L+KEL+
Sbjct:  432 LPAYYAGPLRRALTRMGTPLALAQTLIPENSEN-LSYSVSNYLKRLKNQAKVEYDKLCSEITLRQNAQLNMKQNSEQIRVMPKVTLKKELI 521
[Close]
BLAST of EMLSAG00000003169 vs. Select Arthropod Genomes
Match: gb|KFM75737.1| (Integrator complex subunit 6-A, partial [Stegodyphus mimosarum])

HSP 1 Score: 58.9214 bits (141), Expect = 1.199e-11
Identity = 29/55 (52.73%), Postives = 38/55 (69.09%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDK 55
            MP YYA  L++AL +MG  NL    + D+++NCLS  V  YLKR KNQAK E++K
Sbjct:   38 MPLYYAAPLKRALQKMGPPNL----VHDTMENCLSYNVLNYLKRLKNQAKTEFEK 88
[Close]
BLAST of EMLSAG00000003169 vs. Select Arthropod Genomes
Match: EEB20415.1 (dice1/dead/H box polypeptide, putative [Pediculus humanus corporis])

HSP 1 Score: 55.4546 bits (132), Expect = 1.817e-9
Identity = 32/87 (36.78%), Postives = 55/87 (63.22%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGA-GNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDK-------TPSSSSLPRK-GIVPRSPLRKELL 78
            MP+YY G LR+AL +MG   +LA +LIP++ ++ +S  V  YLK+ K QAK ++++         ++ ++P    ++PR PL+K L+
Sbjct:  431 MPSYYVGPLRRALTKMGVPASLAQTLIPETTESSISYSVMQYLKKLKIQAKNDFERLCDEVNNKQNNKNIPEGIRVIPRMPLKKSLV 517
[Close]
BLAST of EMLSAG00000003169 vs. nr
Match: gi|321462328|gb|EFX73352.1| (hypothetical protein DAPPUDRAFT_188894 [Daphnia pulex])

HSP 1 Score: 79.7221 bits (195), Expect = 2.894e-15
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRKGIV------PRSPLRKELL 78
            MP YYA  LR+AL RMGA NLA +LIP+SLDN LS  +  YLKR K+QAK+E+D+  S     R+ +V      PRS  RK+ +
Sbjct:  426 MPPYYAAPLRRALTRMGAPNLASTLIPESLDNNLSYSIVNYLKRLKHQAKVEFDRVCSEVGRTRQVVVDSIKVIPRSAFRKDFI 509
[Close]
BLAST of EMLSAG00000003169 vs. nr
Match: gi|942404305|gb|JAN84082.1| (DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA protein [Daphnia magna])

HSP 1 Score: 79.7221 bits (195), Expect = 2.992e-15
Identity = 50/109 (45.87%), Postives = 64/109 (58.72%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRK------GIVPRSPLRKELLFSSFPQYKVVHSQAIDRFFWLYFRM 103
            MP YYA  LR+AL RMGA NLA +LIP+SLDN LS  +  YLKR K+QAK+E+D+  S     R+       ++PRS  RK+  F S P         ID+F  L  +M
Sbjct:  446 MPPYYAAPLRRALTRMGAPNLASTLIPESLDNNLSYSIVNYLKRLKHQAKVEFDRVCSEVGRNRQIVVDSIKVIPRSAFRKD--FISNPTL-------IDKFLNLREQM 545
[Close]
BLAST of EMLSAG00000003169 vs. nr
Match: gi|942304319|gb|JAN34092.1| (DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA protein [Daphnia magna])

HSP 1 Score: 79.7221 bits (195), Expect = 3.049e-15
Identity = 50/109 (45.87%), Postives = 64/109 (58.72%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRK------GIVPRSPLRKELLFSSFPQYKVVHSQAIDRFFWLYFRM 103
            MP YYA  LR+AL RMGA NLA +LIP+SLDN LS  +  YLKR K+QAK+E+D+  S     R+       ++PRS  RK+  F S P         ID+F  L  +M
Sbjct:  433 MPPYYAAPLRRALTRMGAPNLASTLIPESLDNNLSYSIVNYLKRLKHQAKVEFDRVCSEVGRNRQIVVDSIKVIPRSAFRKD--FISNPTL-------IDKFLNLREQM 532
[Close]
BLAST of EMLSAG00000003169 vs. nr
Match: gi|1022765533|gb|KZS10731.1| (Integrator complex subunit 6 [Daphnia magna])

HSP 1 Score: 79.7221 bits (195), Expect = 3.139e-15
Identity = 50/109 (45.87%), Postives = 64/109 (58.72%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRK------GIVPRSPLRKELLFSSFPQYKVVHSQAIDRFFWLYFRM 103
            MP YYA  LR+AL RMGA NLA +LIP+SLDN LS  +  YLKR K+QAK+E+D+  S     R+       ++PRS  RK+  F S P         ID+F  L  +M
Sbjct:  432 MPPYYAAPLRRALTRMGAPNLASTLIPESLDNNLSYSIVNYLKRLKHQAKVEFDRVCSEVGRNRQIVVDSIKVIPRSAFRKD--FISNPTL-------IDKFLNLREQM 531
[Close]
BLAST of EMLSAG00000003169 vs. nr
Match: gi|942337917|gb|JAN50891.1| (DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA protein [Daphnia magna])

HSP 1 Score: 79.7221 bits (195), Expect = 3.312e-15
Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRK------GIVPRSPLRKELL 78
            MP YYA  LR+AL RMGA NLA +LIP+SLDN LS  +  YLKR K+QAK+E+D+  S     R+       ++PRS  RK+ +
Sbjct:  432 MPPYYAAPLRRALTRMGAPNLASTLIPESLDNNLSYSIVNYLKRLKHQAKVEFDRVCSEVGRNRQIVVDSIKVIPRSAFRKDFI 515
[Close]
BLAST of EMLSAG00000003169 vs. nr
Match: gi|942324489|gb|JAN44177.1| (DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA protein [Daphnia magna])

HSP 1 Score: 79.337 bits (194), Expect = 3.473e-15
Identity = 47/109 (43.12%), Postives = 63/109 (57.80%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRK------GIVPRSPLRKELLFSSFPQYKVVHSQAIDRFFWLYFRM 103
            MP YYA  LR+AL RMGA NLA +LIP+SLDN LS  +  YLKR K+QAK+E+D+  S     R+       ++PRS  RK+          + +   ID+F  L  +M
Sbjct:  432 MPPYYAAPLRRALTRMGAPNLASTLIPESLDNNLSYSIVNYLKRLKHQAKVEFDRVCSEVGRNRQIVVDSIKVIPRSAFRKDF---------ISNPTLIDKFLNLREQM 531
[Close]
BLAST of EMLSAG00000003169 vs. nr
Match: gi|942327287|gb|JAN45576.1| (DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA protein [Daphnia magna])

HSP 1 Score: 79.337 bits (194), Expect = 3.507e-15
Identity = 50/109 (45.87%), Postives = 64/109 (58.72%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRK------GIVPRSPLRKELLFSSFPQYKVVHSQAIDRFFWLYFRM 103
            MP YYA  LR+AL RMGA NLA +LIP+SLDN LS  +  YLKR K+QAK+E+D+  S     R+       ++PRS  RK+  F S P         ID+F  L  +M
Sbjct:  432 MPPYYAAPLRRALTRMGAPNLASTLIPESLDNNLSYSIVNYLKRLKHQAKVEFDRVCSEVGRNRQIVVDSIKVIPRSAFRKD--FISNPTL-------IDKFLNLREQM 531
[Close]
BLAST of EMLSAG00000003169 vs. nr
Match: gi|942333799|gb|JAN48832.1| (DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA protein [Daphnia magna])

HSP 1 Score: 79.337 bits (194), Expect = 3.716e-15
Identity = 50/109 (45.87%), Postives = 64/109 (58.72%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRK------GIVPRSPLRKELLFSSFPQYKVVHSQAIDRFFWLYFRM 103
            MP YYA  LR+AL RMGA NLA +LIP+SLDN LS  +  YLKR K+QAK+E+D+  S     R+       ++PRS  RK+  F S P         ID+F  L  +M
Sbjct:  327 MPPYYAAPLRRALTRMGAPNLASTLIPESLDNNLSYSIVNYLKRLKHQAKVEFDRVCSEVGRNRQIVVDSIKVIPRSAFRKD--FISNPTL-------IDKFLNLREQM 426
[Close]
BLAST of EMLSAG00000003169 vs. nr
Match: gi|942321601|gb|JAN42733.1| (DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA protein [Daphnia magna])

HSP 1 Score: 79.337 bits (194), Expect = 3.732e-15
Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGNLAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDKTPSSSSLPRK------GIVPRSPLRKELL 78
            MP YYA  LR+AL RMGA NLA +LIP+SLDN LS  +  YLKR K+QAK+E+D+  S     R+       ++PRS  RK+ +
Sbjct:  432 MPPYYAAPLRRALTRMGAPNLASTLIPESLDNNLSYSIVNYLKRLKHQAKVEFDRVCSEVGRNRQIVVDSIKVIPRSAFRKDFI 515
[Close]
BLAST of EMLSAG00000003169 vs. nr
Match: gi|1009373937|gb|KYM97765.1| (Integrator complex subunit 6 [Cyphomyrmex costatus])

HSP 1 Score: 78.1814 bits (191), Expect = 9.846e-15
Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 0 
Query:    1 MPTYYAGSLRKALLRMGAGN-LAISLIPDSLDNCLSIRVTTYLKRHKNQAKLEYDK-------------------TPSSSSLPRKG--IVPRSPLRKELL 78
            MPTYYA SLR+AL RMGA   LA +LIPD++DN LS  V  YLKR KNQAK+E+D+                   +  ++S+  +G  +VP+SPL+K+L+
Sbjct:  495 MPTYYAASLRRALTRMGASTPLAQTLIPDNMDNSLSYSVLNYLKRLKNQAKIEFDRLCNEVISKQVAASNLTKNLSNCTTSVVTEGVRVVPKSPLKKDLV 594
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003169 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 9
Match NameE-valueIdentityDescription
-4.626e-648.21symbol:INTS6 "cDNA FLJ45485 fis, clone BRTHA200266... [more]
-4.835e-648.21symbol:INTS6 "Integrator complex subunit 6" specie... [more]
-4.873e-648.21symbol:Ints6 "integrator complex subunit 6" specie... [more]
-4.891e-647.46symbol:INTS6 "Integrator complex subunit 6" specie... [more]
-5.048e-648.21symbol:INTS6 "Uncharacterized protein" species:961... [more]
-5.091e-648.21symbol:INTS6 "Uncharacterized protein" species:991... [more]
-5.137e-648.21symbol:INTS6 "Uncharacterized protein" species:982... [more]
-1.327e-546.43symbol:INTS6 "Uncharacterized protein" species:903... [more]
-2.945e-549.09symbol:ddx26b "DEAD/H (Asp-Glu-Ala-Asp/His) box po... [more]
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BLAST of EMLSAG00000003169 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 8
Match NameE-valueIdentityDescription
gi|592776710|gb|GAXK01177858.1|3.201e-2157.95TSA: Calanus finmarchicus comp14041_c9_seq7 transc... [more]
gi|592776711|gb|GAXK01177857.1|4.913e-2157.95TSA: Calanus finmarchicus comp14041_c9_seq6 transc... [more]
gi|592776722|gb|GAXK01177846.1|1.342e-2057.95TSA: Calanus finmarchicus comp14041_c7_seq6 transc... [more]
gi|592776723|gb|GAXK01177845.1|1.523e-2057.95TSA: Calanus finmarchicus comp14041_c7_seq5 transc... [more]
gi|592776725|gb|GAXK01177843.1|3.583e-2057.95TSA: Calanus finmarchicus comp14041_c7_seq3 transc... [more]
gi|592776726|gb|GAXK01177842.1|4.038e-2057.95TSA: Calanus finmarchicus comp14041_c7_seq2 transc... [more]
gi|592844082|gb|GAXK01113462.1|4.311e+032.14TSA: Calanus finmarchicus comp95099_c0_seq1 transc... [more]
gi|592776719|gb|GAXK01177849.1|9.357e+084.62TSA: Calanus finmarchicus comp14041_c7_seq9 transc... [more]
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BLAST of EMLSAG00000003169 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAP000000031695.487e-75100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1769:1835... [more]
EMLSAP000000084811.786e-4177.23pep:novel supercontig:LSalAtl2s:LSalAtl2s51:917098... [more]
EMLSAP000000010531.468e-3873.27pep:novel supercontig:LSalAtl2s:LSalAtl2s1173:4373... [more]
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BLAST of EMLSAG00000003169 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
gi|126258172|sp|Q2TAF4.1|INT6A_XENLA1.049e-750.00RecName: Full=Integrator complex subunit 6-A; Shor... [more]
gi|82180065|sp|Q5U4W6.1|INT6B_XENLA4.558e-748.21RecName: Full=Integrator complex subunit 6-B; Shor... [more]
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BLAST of EMLSAG00000003169 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 9
Match NameE-valueIdentityDescription
EFX73352.15.915e-1851.19hypothetical protein DAPPUDRAFT_188894 [Daphnia pu... [more]
XP_006564516.12.440e-1645.00PREDICTED: integrator complex subunit 6 isoform X1... [more]
XP_395179.22.511e-1645.00PREDICTED: integrator complex subunit 6 isoform X2... [more]
EFX66579.19.856e-1648.84hypothetical protein DAPPUDRAFT_331956 [Daphnia pu... [more]
gb|EEC07918.1|9.005e-1563.64dice1/dead/H box polypeptide, putative, partial [I... [more]
gb|KFM66593.1|5.652e-1455.93Integrator complex subunit 6, partial [Stegodyphus... [more]
gb|EFA02055.1|1.042e-1245.05Integrator complex subunit 6-A-like Protein [Tribo... [more]
gb|KFM75737.1|1.199e-1152.73Integrator complex subunit 6-A, partial [Stegodyph... [more]
EEB20415.11.817e-936.78dice1/dead/H box polypeptide, putative [Pediculus ... [more]
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BLAST of EMLSAG00000003169 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|321462328|gb|EFX73352.1|2.894e-1551.19hypothetical protein DAPPUDRAFT_188894 [Daphnia pu... [more]
gi|942404305|gb|JAN84082.1|2.992e-1545.87DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (D... [more]
gi|942304319|gb|JAN34092.1|3.049e-1545.87DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (D... [more]
gi|1022765533|gb|KZS10731.1|3.139e-1545.87Integrator complex subunit 6 [Daphnia magna][more]
gi|942337917|gb|JAN50891.1|3.312e-1550.00DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (D... [more]
gi|942324489|gb|JAN44177.1|3.473e-1543.12DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (D... [more]
gi|942327287|gb|JAN45576.1|3.507e-1545.87DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (D... [more]
gi|942333799|gb|JAN48832.1|3.716e-1545.87DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (D... [more]
gi|942321601|gb|JAN42733.1|3.732e-1550.00DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (D... [more]
gi|1009373937|gb|KYM97765.1|9.846e-1546.00Integrator complex subunit 6 [Cyphomyrmex costatus... [more]

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BLAST of EMLSAG00000003169 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1769supercontigLSalAtl2s1769:18358..18678 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s1769-processed-gene-0.0
Biotypeprotein_coding
EvidenceIEA
NoteIntegrator complex subunit 6-A
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003169 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003169EMLSAT00000003169-699016Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1769:18358..18678+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003169-685935 ID=EMLSAG00000003169-685935|Name=EMLSAG00000003169|organism=Lepeophtheirus salmonis|type=gene|length=321bp|location=Sequence derived from alignment at LSalAtl2s1769:18358..18678+ (Lepeophtheirus salmonis)
ATGCCTACTTACTATGCTGGATCACTGAGGAAAGCCCTCCTAAGGATGGG
AGCAGGAAATCTCGCGATATCTCTTATACCAGATAGTTTAGATAATTGTT
TAAGTATTAGAGTAACTACCTATCTCAAAAGACACAAAAATCAAGCTAAG
TTAGAGTATGATAAAACCCCAAGTTCTTCTTCTCTTCCGAGAAAAGGAAT
TGTACCTCGATCCCCTTTGAGGAAGGAATTGTTGTTCTCTAGTTTCCCTC
AATATAAAGTTGTTCACTCTCAAGCAATCGATAGATTTTTCTGGTTATAC
TTTAGAATGCAAGGAGACTAA
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