EMLSAG00000003170, EMLSAG00000003170-685936 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000003170 vs. GO
Match: - (symbol:ddx26b "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B" species:7955 "Danio rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus" evidence=IEA] ZFIN:ZDB-GENE-040426-1150 GO:GO:0005634 Gene3D:3.40.50.410 InterPro:IPR002035 SMART:SM00327 PROSITE:PS50234 CTD:203522 eggNOG:NOG276796 HOGENOM:HOG000015308 HOVERGEN:HBG081468 EMBL:BC054905 RefSeq:NP_956728.1 UniGene:Dr.82458 ProteinModelPortal:Q7SYD9 STRING:7955.ENSDARP00000026435 PRIDE:Q7SYD9 GeneID:393406 KEGG:dre:393406 InParanoid:Q7SYD9 KO:K13143 NextBio:20814450 PRO:PR:Q7SYD9 Uniprot:Q7SYD9) HSP 1 Score: 46.2098 bits (108), Expect = 8.013e-6 Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHN-PIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LK MP PLRE++ + P R H GNPFK +K ++ + EFV Sbjct: 591 MGNYQEYLKMMPSPLREIDPDQPKRLHTFGNPFKQDKKGMMIDEADEFV 639
BLAST of EMLSAG00000003170 vs. GO
Match: - (symbol:INTS6 "Integrator complex subunit 6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] GO:GO:0005634 GO:GO:0015629 KO:K13143 EMBL:AL354820 EMBL:AL137780 UniGene:Hs.439440 GeneID:26512 KEGG:hsa:26512 CTD:26512 HGNC:HGNC:14879 ChiTaRS:INTS6 RefSeq:XP_005266398.1 Ensembl:ENST00000425000 HOGENOM:HOG000008189 NextBio:35484438 ArrayExpress:C9J0C6 Bgee:C9J0C6 Uniprot:C9J0C6) HSP 1 Score: 45.8246 bits (107), Expect = 8.085e-6 Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVE-HNPIRQHKSGNPFKINKTIILDEVFHEFVPN 50 M NYQ++LK++P PLRE++ P R H GNPFK++K ++ + EFV Sbjct: 155 MGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEADEFVAG 205
BLAST of EMLSAG00000003170 vs. GO
Match: - (symbol:INTS6 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0016180 "snRNA processing" evidence=IEA] [GO:0032039 "integrator complex" evidence=IEA] GO:GO:0015629 GO:GO:0032039 GeneTree:ENSGT00390000016655 OrthoDB:EOG7ZGX2C TreeFam:TF323386 GO:GO:0016180 OMA:EQCAEEN EMBL:DAAA02032953 EMBL:DAAA02032954 EMBL:DAAA02032955 Ensembl:ENSBTAT00000003868 Uniprot:E1BF57) HSP 1 Score: 46.2098 bits (108), Expect = 8.289e-6 Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHN-PIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LK++P PLRE++ + P R H GNPFK++K ++ + EFV Sbjct: 579 MGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEADEFV 627
BLAST of EMLSAG00000003170 vs. GO
Match: - (symbol:INTS6 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0016180 "snRNA processing" evidence=IEA] [GO:0032039 "integrator complex" evidence=IEA] GO:GO:0015629 GO:GO:0032039 GeneTree:ENSGT00390000016655 OrthoDB:EOG7ZGX2C TreeFam:TF323386 GO:GO:0016180 OMA:EQCAEEN EMBL:CU041247 Ensembl:ENSSSCT00000010282 Uniprot:F1RK31) HSP 1 Score: 45.8246 bits (107), Expect = 8.604e-6 Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHN-PIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LK++P PLRE++ + P R H GNPFK++K ++ + EFV Sbjct: 579 MGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEADEFV 627
BLAST of EMLSAG00000003170 vs. GO
Match: - (symbol:INTS6 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0016180 "snRNA processing" evidence=IEA] [GO:0032039 "integrator complex" evidence=IEA] GO:GO:0032039 GeneTree:ENSGT00390000016655 OrthoDB:EOG7ZGX2C TreeFam:TF323386 GO:GO:0016180 EMBL:AADN03001259 Ensembl:ENSGALT00000027488 NextBio:20822009 PRO:PR:E1BV07 Uniprot:E1BV07) HSP 1 Score: 45.8246 bits (107), Expect = 8.678e-6 Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHN-PIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LK++P PLRE++ + P R H GNPFK++K ++ + EFV Sbjct: 514 MGNYQEYLKQIPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEADEFV 562
BLAST of EMLSAG00000003170 vs. GO
Match: - (symbol:INTS6 "Integrator complex subunit 6" species:9606 "Homo sapiens" [GO:0004888 "transmembrane signaling receptor activity" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS] [GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0016180 "snRNA processing" evidence=IDA] [GO:0032039 "integrator complex" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] GO:GO:0015629 GO:GO:0004888 Gene3D:3.40.50.410 InterPro:IPR002035 SMART:SM00327 PROSITE:PS50234 GO:GO:0032039 eggNOG:NOG276796 HOGENOM:HOG000015308 HOVERGEN:HBG081468 OrthoDB:EOG7ZGX2C TreeFam:TF323386 GO:GO:0016180 KO:K13143 EMBL:AF097645 EMBL:AL833524 EMBL:AL354820 EMBL:AL137780 EMBL:BC013358 EMBL:BC018725 EMBL:BC032386 EMBL:BC039829 EMBL:AF141326 EMBL:AL117626 EMBL:BK005730 PIR:T17330 RefSeq:NP_001035026.1 RefSeq:NP_001035027.1 RefSeq:NP_036273.1 RefSeq:XP_005266396.1 UniGene:Hs.439440 ProteinModelPortal:Q9UL03 SMR:Q9UL03 BioGrid:117717 DIP:DIP-38627N IntAct:Q9UL03 MINT:MINT-4541530 STRING:9606.ENSP00000310260 PhosphoSite:Q9UL03 DMDM:74753376 PaxDb:Q9UL03 PRIDE:Q9UL03 Ensembl:ENST00000311234 Ensembl:ENST00000398119 Ensembl:ENST00000442263 GeneID:26512 KEGG:hsa:26512 UCSC:uc001vfi.3 UCSC:uc001vfm.2 CTD:26512 GeneCards:GC13M051928 HGNC:HGNC:14879 HPA:HPA001552 HPA:HPA001846 MIM:604331 neXtProt:NX_Q9UL03 PharmGKB:PA27212 InParanoid:Q9UL03 OMA:EQCAEEN PhylomeDB:Q9UL03 ChiTaRS:INTS6 GeneWiki:INTS6 GenomeRNAi:26512 NextBio:48812 PRO:PR:Q9UL03 ArrayExpress:Q9UL03 Bgee:Q9UL03 CleanEx:HS_INTS6 Genevestigator:Q9UL03 Uniprot:Q9UL03) HSP 1 Score: 45.8246 bits (107), Expect = 8.786e-6 Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHN-PIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LK++P PLRE++ + P R H GNPFK++K ++ + EFV Sbjct: 587 MGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEADEFV 635
BLAST of EMLSAG00000003170 vs. GO
Match: - (symbol:INTS6 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0016180 "snRNA processing" evidence=IEA] [GO:0032039 "integrator complex" evidence=IEA] GO:GO:0015629 GO:GO:0032039 GeneTree:ENSGT00390000016655 TreeFam:TF323386 GO:GO:0016180 OMA:EQCAEEN EMBL:AAEX03013062 EMBL:AAEX03013063 EMBL:AAEX03013064 EMBL:AAEX03013065 Ensembl:ENSCAFT00000030029 Uniprot:F1PKG3) HSP 1 Score: 45.8246 bits (107), Expect = 8.939e-6 Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHN-PIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LK++P PLRE++ + P R H GNPFK++K ++ + EFV Sbjct: 521 MGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEADEFV 569
BLAST of EMLSAG00000003170 vs. GO
Match: - (symbol:Ints6 "integrator complex subunit 6" species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO] [GO:0032039 "integrator complex" evidence=ISO] MGI:MGI:1202397 GO:GO:0015629 Gene3D:3.40.50.410 InterPro:IPR002035 SMART:SM00327 PROSITE:PS50234 GO:GO:0032039 eggNOG:NOG276796 GeneTree:ENSGT00390000016655 HOGENOM:HOG000015308 HOVERGEN:HBG081468 OrthoDB:EOG7ZGX2C TreeFam:TF323386 GO:GO:0016180 KO:K13143 CTD:26512 OMA:EQCAEEN ChiTaRS:INTS6 EMBL:AK046055 EMBL:AK172178 EMBL:BC058637 EMBL:BC059263 EMBL:U57368 PIR:T30176 RefSeq:NP_032741.2 RefSeq:XP_006518745.1 UniGene:Mm.319684 UniGene:Mm.441110 ProteinModelPortal:Q6PCM2 SMR:Q6PCM2 BioGrid:201810 IntAct:Q6PCM2 MINT:MINT-4109478 STRING:10090.ENSMUSP00000086788 PhosphoSite:Q6PCM2 PaxDb:Q6PCM2 PRIDE:Q6PCM2 Ensembl:ENSMUST00000053959 GeneID:18130 KEGG:mmu:18130 UCSC:uc007ugp.2 UCSC:uc007ugr.1 UCSC:uc007ugu.1 InParanoid:Q6PCM2 NextBio:293364 PRO:PR:Q6PCM2 Bgee:Q6PCM2 CleanEx:MM_INTS6 Genevestigator:Q6PCM2 Uniprot:Q6PCM2) HSP 1 Score: 45.8246 bits (107), Expect = 8.942e-6 Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHN-PIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LK++P PLRE++ + P R H GNPFK++K ++ + EFV Sbjct: 586 MGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEADEFV 634
BLAST of EMLSAG00000003170 vs. GO
Match: - (symbol:INTS6 "cDNA FLJ45485 fis, clone BRTHA2002661, highly similar to Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] GO:GO:0005634 GO:GO:0015629 EMBL:CH471075 HOGENOM:HOG000015308 HOVERGEN:HBG081468 KO:K13143 EMBL:AL354820 EMBL:AL137780 UniGene:Hs.439440 GeneID:26512 KEGG:hsa:26512 CTD:26512 HGNC:HGNC:14879 ChiTaRS:INTS6 EMBL:AK074946 EMBL:AK096696 EMBL:AK128795 RefSeq:XP_005266397.1 Ensembl:ENST00000497989 NextBio:35469368 Uniprot:B3KQH5) HSP 1 Score: 45.8246 bits (107), Expect = 9.405e-6 Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHN-PIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LK++P PLRE++ + P R H GNPFK++K ++ + EFV Sbjct: 409 MGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEADEFV 457
BLAST of EMLSAG00000003170 vs. GO
Match: - (symbol:INTS6 "Integrator complex subunit 6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] GO:GO:0005634 GO:GO:0015629 EMBL:CH471075 EMBL:AL354820 EMBL:AL137780 UniGene:Hs.439440 HGNC:HGNC:14879 ChiTaRS:INTS6 ProteinModelPortal:G5E9X1 Ensembl:ENST00000490542 NextBio:35518258 ArrayExpress:G5E9X1 Uniprot:G5E9X1) HSP 1 Score: 45.8246 bits (107), Expect = 9.438e-6 Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVE-HNPIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LK++P PLRE++ P R H GNPFK++K ++ + EFV Sbjct: 271 MGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEADEFV 319
BLAST of EMLSAG00000003170 vs. C. finmarchicus
Match: gi|592776723|gb|GAXK01177845.1| (TSA: Calanus finmarchicus comp14041_c7_seq5 transcribed RNA sequence) HSP 1 Score: 62.3882 bits (150), Expect = 3.084e-12 Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIIL-DEV 43 M NYQD+LK+ P+PLRE+E P+RQH GNPFKINK +++ DEV Sbjct: 49 MGNYQDYLKKQPLPLRELESQPVRQHMFGNPFKINKNLMMTDEV 180
BLAST of EMLSAG00000003170 vs. C. finmarchicus
Match: gi|592776726|gb|GAXK01177842.1| (TSA: Calanus finmarchicus comp14041_c7_seq2 transcribed RNA sequence) HSP 1 Score: 62.3882 bits (150), Expect = 4.587e-12 Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIIL-DEV 43 M NYQD+LK+ P+PLRE+E P+RQH GNPFKINK +++ DEV Sbjct: 49 MGNYQDYLKKQPLPLRELESQPVRQHMFGNPFKINKNLMMTDEV 180
BLAST of EMLSAG00000003170 vs. C. finmarchicus
Match: gi|592776717|gb|GAXK01177851.1| (TSA: Calanus finmarchicus comp14041_c7_seq11 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 7.603e-4 Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNP 22 M NYQD+LK+ P+PLRE+E P Sbjct: 3 MGNYQDYLKKQPLPLRELESQP 68
BLAST of EMLSAG00000003170 vs. C. finmarchicus
Match: gi|592776706|gb|GAXK01177862.1| (TSA: Calanus finmarchicus comp14041_c9_seq11 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 1.006e-3 Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNP 22 M NYQD+LK+ P+PLRE+E P Sbjct: 352 MGNYQDYLKKQPLPLRELESQP 417
BLAST of EMLSAG00000003170 vs. C. finmarchicus
Match: gi|592776722|gb|GAXK01177846.1| (TSA: Calanus finmarchicus comp14041_c7_seq6 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 3.498e-3 Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNP 22 M NYQD+LK+ P+PLRE+E P Sbjct: 3 MGNYQDYLKKQPLPLRELESQP 68
BLAST of EMLSAG00000003170 vs. C. finmarchicus
Match: gi|592776725|gb|GAXK01177843.1| (TSA: Calanus finmarchicus comp14041_c7_seq3 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 4.026e-3 Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNP 22 M NYQD+LK+ P+PLRE+E P Sbjct: 3 MGNYQDYLKKQPLPLRELESQP 68
BLAST of EMLSAG00000003170 vs. C. finmarchicus
Match: gi|592814388|gb|GAXK01140180.1| (TSA: Calanus finmarchicus comp5574747_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 1.731e+0 Identity = 21/56 (37.50%), Postives = 26/56 (46.43%), Query Frame = 0 Query: 3 NYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFVPNRMELLFIQ 58 N + FL P V N I++ KSG P KIN I E + E N E+L Q Sbjct: 70 NLKQFLSDNPDVNEGVLRNIIKKVKSGMPKKINSESIYYERYKESWKNNKEILDGQ 237
BLAST of EMLSAG00000003170 vs. C. finmarchicus
Match: gi|592784777|gb|GAXK01169791.1| (TSA: Calanus finmarchicus comp1184_c6_seq6 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 2.213e+0 Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 0 Query: 2 ENYQDFLKRMPIPLREVEHNPIR 24 + +QDFL + + REV H P R Sbjct: 123 KTFQDFLSCLHVAAREVNHQPSR 191
BLAST of EMLSAG00000003170 vs. L. salmonis peptides
Match: EMLSAP00000003170 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1769:18781:18963:1 gene:EMLSAG00000003170 transcript:EMLSAT00000003170 description:"snap_masked-LSalAtl2s1769-processed-gene-0.4") HSP 1 Score: 122.094 bits (305), Expect = 5.388e-38 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFVPNRMELLFIQEE 60 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFVPNRMELLFIQEE Sbjct: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFVPNRMELLFIQEE 60
BLAST of EMLSAG00000003170 vs. L. salmonis peptides
Match: EMLSAP00000001053 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1173:43730:64482:1 gene:EMLSAG00000001053 transcript:EMLSAT00000001053 description:"snap_masked-LSalAtl2s1173-processed-gene-0.12") HSP 1 Score: 73.1738 bits (178), Expect = 9.762e-17 Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQD+LKRMP PL+E+E+ P+RQH GNPFKINK I+LDEV E Sbjct: 513 MGNYQDYLKRMPTPLKEIENTPVRQHMFGNPFKINKNIMLDEVVDEIA 560
BLAST of EMLSAG00000003170 vs. L. salmonis peptides
Match: EMLSAP00000008481 (pep:novel supercontig:LSalAtl2s:LSalAtl2s51:917098:919923:1 gene:EMLSAG00000008481 transcript:EMLSAT00000008481 description:"augustus_masked-LSalAtl2s51-processed-gene-9.2") HSP 1 Score: 70.0922 bits (170), Expect = 1.413e-15 Identity = 34/48 (70.83%), Postives = 36/48 (75.00%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQDFLK MP PLRE+E PIRQH GNPFKINK I+LDEV E Sbjct: 605 MGNYQDFLKHMPPPLREIEDIPIRQHMFGNPFKINKNIMLDEVVDEIA 652
BLAST of EMLSAG00000003170 vs. SwissProt
Match: gi|126258172|sp|Q2TAF4.1|INT6A_XENLA (RecName: Full=Integrator complex subunit 6-A; Short=Int6-A) HSP 1 Score: 48.1358 bits (113), Expect = 2.676e-7 Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHN-PIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ+FLK +P PLRE++++ P R H GNPFK++K ++ + EFV Sbjct: 587 MGNYQEFLKHIPSPLRELDYDQPRRLHTFGNPFKLDKKGMMIDEADEFV 635
BLAST of EMLSAG00000003170 vs. SwissProt
Match: gi|82180065|sp|Q5U4W6.1|INT6B_XENLA (RecName: Full=Integrator complex subunit 6-B; Short=Int6-B) HSP 1 Score: 47.3654 bits (111), Expect = 5.530e-7 Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHN-PIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LK +P PLRE++++ P R H GNPFK++K ++ + EFV Sbjct: 587 MGNYQEYLKHIPSPLRELDYDQPRRLHTFGNPFKLDKKGMMIDEADEFV 635
BLAST of EMLSAG00000003170 vs. Select Arthropod Genomes
Match: XP_006564516.1 (PREDICTED: integrator complex subunit 6 isoform X1 [Apis mellifera]) HSP 1 Score: 60.077 bits (144), Expect = 7.006e-12 Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEV 43 M NYQ++LKRM PLRE+E P+RQH GNPFKI+K +++DE Sbjct: 633 MGNYQEYLKRMTPPLREIESAPVRQHMFGNPFKIDKRMMVDEA 675
BLAST of EMLSAG00000003170 vs. Select Arthropod Genomes
Match: XP_395179.2 (PREDICTED: integrator complex subunit 6 isoform X2 [Apis mellifera]) HSP 1 Score: 60.077 bits (144), Expect = 7.356e-12 Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEV 43 M NYQ++LKRM PLRE+E P+RQH GNPFKI+K +++DE Sbjct: 623 MGNYQEYLKRMTPPLREIESAPVRQHMFGNPFKIDKRMMVDEA 665
BLAST of EMLSAG00000003170 vs. Select Arthropod Genomes
Match: EFX73352.1 (hypothetical protein DAPPUDRAFT_188894 [Daphnia pulex]) HSP 1 Score: 59.6918 bits (143), Expect = 1.141e-11 Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LKR+ PLRE+E P+RQH GNPFKI+K +++DE + V Sbjct: 584 MGNYQEYLKRIAPPLREIESTPVRQHMFGNPFKIDKRMMVDEADIDLV 631
BLAST of EMLSAG00000003170 vs. Select Arthropod Genomes
Match: EEB20415.1 (dice1/dead/H box polypeptide, putative [Pediculus humanus corporis]) HSP 1 Score: 57.3806 bits (137), Expect = 6.769e-11 Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEV 43 M NYQ+ LKR+P PL+E+E P+RQH GNPFKI+K +++DE Sbjct: 602 MGNYQEHLKRLPPPLKEIETPPVRQHMFGNPFKIDKRMMVDEA 644
BLAST of EMLSAG00000003170 vs. Select Arthropod Genomes
Match: gb|EFA02055.1| (Integrator complex subunit 6-A-like Protein [Tribolium castaneum]) HSP 1 Score: 54.299 bits (129), Expect = 8.442e-10 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LKR LRE+E P+RQH GNPFKI+K +++DE + V Sbjct: 600 MGNYQEYLKRQTPQLREIESAPVRQHMFGNPFKIDKRMMVDEADIDLV 647
BLAST of EMLSAG00000003170 vs. Select Arthropod Genomes
Match: gb|KPM05515.1| (integrator complex subunit 6-A-like protein [Sarcoptes scabiei]) HSP 1 Score: 48.9062 bits (115), Expect = 6.350e-8 Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINK-TIILDEV 43 M NYQ++LKR PLRE+E P R GNPFKINK +++DE Sbjct: 598 MGNYQEYLKRKQNPLREIEAQPTRTQLFGNPFKINKGNVMIDEA 641
BLAST of EMLSAG00000003170 vs. Select Arthropod Genomes
Match: EAU77196.3 (AGAP000631-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 45.8246 bits (107), Expect = 8.744e-7 Identity = 19/40 (47.50%), Postives = 28/40 (70.00%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIIL 40 M NYQ++LK PLRE+E +RQH GNP+K +K +++ Sbjct: 588 MGNYQEYLKNKETPLRELEPTNVRQHMFGNPYKKDKNMVM 627
BLAST of EMLSAG00000003170 vs. Select Arthropod Genomes
Match: AGB95107.1 (integrator 6, isoform E [Drosophila melanogaster]) HSP 1 Score: 45.8246 bits (107), Expect = 8.829e-7 Identity = 19/40 (47.50%), Postives = 28/40 (70.00%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIIL 40 M NYQ++LK PLRE+E +RQH GNP+K +K +++ Sbjct: 606 MGNYQEYLKNKDNPLREIEPTNVRQHMFGNPYKKDKHMVM 645
BLAST of EMLSAG00000003170 vs. Select Arthropod Genomes
Match: AGB95106.1 (integrator 6, isoform D [Drosophila melanogaster]) HSP 1 Score: 45.8246 bits (107), Expect = 8.829e-7 Identity = 19/40 (47.50%), Postives = 28/40 (70.00%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIIL 40 M NYQ++LK PLRE+E +RQH GNP+K +K +++ Sbjct: 606 MGNYQEYLKNKDNPLREIEPTNVRQHMFGNPYKKDKHMVM 645
BLAST of EMLSAG00000003170 vs. Select Arthropod Genomes
Match: AGB95105.1 (integrator 6, isoform C [Drosophila melanogaster]) HSP 1 Score: 45.8246 bits (107), Expect = 8.829e-7 Identity = 19/40 (47.50%), Postives = 28/40 (70.00%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIIL 40 M NYQ++LK PLRE+E +RQH GNP+K +K +++ Sbjct: 606 MGNYQEYLKNKDNPLREIEPTNVRQHMFGNPYKKDKHMVM 645
BLAST of EMLSAG00000003170 vs. nr
Match: gi|1061488730|gb|ODN05774.1| (Integrator complex subunit 6-A [Orchesella cincta]) HSP 1 Score: 65.855 bits (159), Expect = 3.150e-11 Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEV 43 M NYQ++LKRMP PLRE+E P+RQH GNPFKI+K +I+DE Sbjct: 543 MGNYQEYLKRMPTPLREIESAPVRQHMFGNPFKIDKRMIIDEA 585
BLAST of EMLSAG00000003170 vs. nr
Match: gi|1058138492|gb|JAS72894.1| (hypothetical protein g.28196 [Homalodisca liturata]) HSP 1 Score: 65.0846 bits (157), Expect = 7.297e-11 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LKRMP PLREVE P+RQH GNPFKI+K +++DE + V Sbjct: 650 MGNYQEYLKRMPSPLREVESTPVRQHMFGNPFKIDKRMMVDEADIDLV 697
BLAST of EMLSAG00000003170 vs. nr
Match: gi|1058219836|gb|JAT13434.1| (hypothetical protein g.7125, partial [Graphocephala atropunctata]) HSP 1 Score: 64.6994 bits (156), Expect = 9.553e-11 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LKRMP PLREVE P+RQH GNPFKI+K +++DE + V Sbjct: 404 MGNYQEYLKRMPSPLREVESTPVRQHMFGNPFKIDKRMMVDEADIDLV 451
BLAST of EMLSAG00000003170 vs. nr
Match: gi|1058080058|gb|JAS43690.1| (hypothetical protein g.8924, partial [Cuerna arida]) HSP 1 Score: 64.3142 bits (155), Expect = 1.094e-10 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LKRMP PLREVE P+RQH GNPFKI+K +++DE + V Sbjct: 383 MGNYQEYLKRMPSPLREVESTPVRQHMFGNPFKIDKRMMVDEADIDLV 430
BLAST of EMLSAG00000003170 vs. nr
Match: gi|926613333|ref|XP_013771674.1| (PREDICTED: integrator complex subunit 6-like [Limulus polyphemus]) HSP 1 Score: 64.3142 bits (155), Expect = 1.154e-10 Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LKRMP PLRE+E P+RQH GNPFKI K +++DE + V Sbjct: 617 MGNYQEYLKRMPTPLREIESTPVRQHMFGNPFKIEKRMMVDEADIDLV 664
BLAST of EMLSAG00000003170 vs. nr
Match: gi|1073708711|gb|JAT97412.1| (putative dead box rna helicase, partial [Amblyomma aureolatum]) HSP 1 Score: 63.929 bits (154), Expect = 1.410e-10 Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDE 42 M NYQ++LKRMP PLRE+E P+RQH GNPFKI K +++DE Sbjct: 453 MGNYQEYLKRMPTPLREIESTPVRQHMFGNPFKIEKRMMVDE 494
BLAST of EMLSAG00000003170 vs. nr
Match: gi|443728925|gb|ELU15043.1| (hypothetical protein CAPTEDRAFT_170208 [Capitella teleta]) HSP 1 Score: 63.929 bits (154), Expect = 1.674e-10 Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEV 43 M NYQ++LK+MP PLRE+E P RQH GNPFK+NK +++DE Sbjct: 304 MGNYQEYLKKMPAPLREIETAPARQHTFGNPFKVNKNLMIDET 346
BLAST of EMLSAG00000003170 vs. nr
Match: gi|926626601|ref|XP_013778844.1| (PREDICTED: integrator complex subunit 6-A-like [Limulus polyphemus]) HSP 1 Score: 63.929 bits (154), Expect = 1.738e-10 Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEVFHEFV 48 M NYQ++LKRMP PLRE+E P+RQH GNPFKI K +++DE + V Sbjct: 592 MGNYQEYLKRMPTPLREIESAPVRQHMFGNPFKIEKRMMVDEADIDLV 639
BLAST of EMLSAG00000003170 vs. nr
Match: gi|957841054|ref|XP_014670851.1| (PREDICTED: integrator complex subunit 6-B-like [Priapulus caudatus]) HSP 1 Score: 63.5438 bits (153), Expect = 2.244e-10 Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDE 42 M NYQD+LK MP PLREVE P+R H GNPFK+NK +++DE Sbjct: 674 MGNYQDYLKHMPAPLREVEAVPVRTHMFGNPFKVNKAMMVDE 715
BLAST of EMLSAG00000003170 vs. nr
Match: gi|662220602|ref|XP_008484445.1| (PREDICTED: integrator complex subunit 6-like, partial [Diaphorina citri]) HSP 1 Score: 62.7734 bits (151), Expect = 4.338e-10 Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINKTIILDEV 43 M NYQ++LKRM PLREVE P+RQH GNPFKI+K +++DE Sbjct: 105 MGNYQEYLKRMAAPLREVESTPVRQHMFGNPFKIDKRMMVDEA 147 HSP 2 Score: 56.9954 bits (136), Expect = 4.166e-8 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 0 Query: 1 MENYQDFLKRMPIPLREVEHNPIRQHKSGNPFKINK 36 M NYQ++LKRM PLREVE P+RQH GNPFKI+K Sbjct: 321 MGNYQEYLKRMAAPLREVESTPVRQHMFGNPFKIDK 356 The following BLAST results are available for this feature:
BLAST of EMLSAG00000003170 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 12
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BLAST of EMLSAG00000003170 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 8
BLAST of EMLSAG00000003170 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000003170 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 2
BLAST of EMLSAG00000003170 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 12
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BLAST of EMLSAG00000003170 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000003170 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1769:18781..18963+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000003170-685936 ID=EMLSAG00000003170-685936|Name=EMLSAG00000003170|organism=Lepeophtheirus salmonis|type=gene|length=183bp|location=Sequence derived from alignment at LSalAtl2s1769:18781..18963+ (Lepeophtheirus salmonis)back to top Add to Basket
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