EMLSAG00000003222, EMLSAG00000003222-685988 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000003222 vs. GO
Match: - (symbol:HTR3B "Uncharacterized protein" species:9913 "Bos taurus" [GO:0005230 "extracellular ligand-gated ion channel activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008132 InterPro:IPR008134 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01708 PRINTS:PR01710 GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 GO:GO:0034220 Gene3D:1.20.120.370 Gene3D:2.70.170.10 InterPro:IPR027361 PANTHER:PTHR18945 SUPFAM:SSF63712 SUPFAM:SSF90112 TIGRFAMs:TIGR00860 GeneTree:ENSGT00740000115495 EMBL:DAAA02040316 EMBL:DAAA02040317 ProteinModelPortal:F1MAT3 Ensembl:ENSBTAT00000029852 Uniprot:F1MAT3) HSP 1 Score: 58.5362 bits (140), Expect = 1.290e-8 Identity = 46/171 (26.90%), Postives = 81/171 (47.37%), Query Frame = 0
Query: 37 HTSFMAQHPAINTLLSTYNKVTPPYPE--NKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKW---IDDTSNEVLVPKRLIHIPGILPISKYVREXFDHRELATIYRN--GTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSV 200
H+ A H LL TY K P ++L +S+ + T+ L+ ++WY W+D L W + D E+ +P I P I+ I++YV + +L +Y N GT+ ++ +++ C+ T+ P+D+ NCS T++ H +DL L T+ +
Sbjct: 22 HSRSPALHHLTKQLLQTYRKEVRPVHNWTQATTVYLDVSVHAVLDVDTQNQKLKTSIWYREVWDDEFLSWNSSMFDEIREISLPLSAIWAPDII-INEYV-DIERSPDLPYVYVNSSGTIKHSKPIQVVSACNLETYAFPFDVQNCSLTFSSILHTVEDVDLAFLRSTEDI 190
BLAST of EMLSAG00000003222 vs. GO
Match: - (symbol:HTR3B "Uncharacterized protein" species:9913 "Bos taurus" [GO:0004993 "serotonin receptor activity" evidence=IEA] [GO:0005232 "serotonin-activated cation-selective channel activity" evidence=IEA] [GO:0005887 "integral component of plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008132 InterPro:IPR008134 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01708 PRINTS:PR01710 GO:GO:0005887 GO:GO:0004993 GO:GO:0045211 GO:GO:0006812 GO:GO:0034220 Gene3D:1.20.120.370 Gene3D:2.70.170.10 InterPro:IPR027361 PANTHER:PTHR18945 SUPFAM:SSF63712 SUPFAM:SSF90112 TIGRFAMs:TIGR00860 TreeFam:TF315605 GO:GO:0005232 GeneTree:ENSGT00740000115495 OMA:EVWNDEF OrthoDB:EOG7FXZZK EMBL:DAAA02040316 EMBL:DAAA02040317 ProteinModelPortal:G3N1Q1 Ensembl:ENSBTAT00000062928 Uniprot:G3N1Q1) HSP 1 Score: 58.151 bits (139), Expect = 1.959e-8 Identity = 46/171 (26.90%), Postives = 81/171 (47.37%), Query Frame = 0
Query: 37 HTSFMAQHPAINTLLSTYNKVTPPYPE--NKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKW---IDDTSNEVLVPKRLIHIPGILPISKYVREXFDHRELATIYRN--GTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSV 200
H+ A H LL TY K P ++L +S+ + T+ L+ ++WY W+D L W + D E+ +P I P I+ I++YV + +L +Y N GT+ ++ +++ C+ T+ P+D+ NCS T++ H +DL L T+ +
Sbjct: 27 HSRSPALHHLTKQLLQTYRKEVRPVHNWTQATTVYLDVSVHAVLDVDTQNQKLKTSIWYREVWDDEFLSWNSSMFDEIREISLPLSAIWAPDII-INEYV-DIERSPDLPYVYVNSSGTIKHSKPIQVVSACNLETYAFPFDVQNCSLTFSSILHTVEDVDLAFLRSTEDI 195
BLAST of EMLSAG00000003222 vs. GO
Match: - (symbol:chrna2b "cholinergic receptor, nicotinic, alpha polypeptide 2b (neuronal)" species:7955 "Danio rerio" [GO:0004889 "acetylcholine-activated cation-selective channel activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254 InterPro:IPR018000 ZFIN:ZDB-GENE-041001-99 GO:GO:0016021 GO:GO:0030054 GO:GO:0045211 GO:GO:0006812 GO:GO:0034220 Gene3D:1.20.120.370 Gene3D:2.70.170.10 InterPro:IPR027361 PANTHER:PTHR18945 SUPFAM:SSF63712 SUPFAM:SSF90112 TIGRFAMs:TIGR00860 PROSITE:PS00236 TreeFam:TF315605 GO:GO:0004889 GeneTree:ENSGT00740000115194 EMBL:BX510657 ProteinModelPortal:F1QFE7 Ensembl:ENSDART00000079613 OMA:NITSIRI PRO:PR:F1QFE7 Bgee:F1QFE7 Uniprot:F1QFE7) HSP 1 Score: 56.225 bits (134), Expect = 8.620e-8 Identity = 55/209 (26.32%), Postives = 87/209 (41.63%), Query Frame = 0
Query: 42 AQHPAINTLLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKWID---DTSNEVLVPKRLIHIPGILPISKYVRE-XFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQR 244
A+ L YNK + P P V+ + L+ ++ E+ + T VW +W D +L+W D + VP LI +P I+ + E H A ++ G V K C P+D NC + WT++ A IDL ++ T VDL Y E+ +IN ++ Y + Y I Y F+++R
Sbjct: 40 AEDELFKKLFDGYNKWSRPVPNTSDVVIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWKPSDYDNVTSIRVPSELIWVPDIVLYNNADGEFAVTHMTKAHLFHTGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLERIENT--VDLKDY-WESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRR 245
BLAST of EMLSAG00000003222 vs. GO
Match: - (symbol:CHRNA2 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0004889 "acetylcholine-activated cation-selective channel activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex" evidence=IEA] [GO:0015464 "acetylcholine receptor activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254 InterPro:IPR018000 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0006812 GO:GO:0034220 Gene3D:1.20.120.370 Gene3D:2.70.170.10 InterPro:IPR027361 PANTHER:PTHR18945 SUPFAM:SSF63712 SUPFAM:SSF90112 TIGRFAMs:TIGR00860 PROSITE:PS00236 TreeFam:TF315605 GO:GO:0004889 OrthoDB:EOG72JWGV GO:GO:0005892 GO:GO:0015464 OMA:ACAGHVA GeneTree:ENSGT00740000115194 EMBL:CU633626 Ensembl:ENSSSCT00000010597 Uniprot:F1RJS5) HSP 1 Score: 53.9138 bits (128), Expect = 4.613e-7 Identity = 53/201 (26.37%), Postives = 86/201 (42.79%), Query Frame = 0
Query: 50 LLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKWID---DTSNEVLVPKRLIHIPGILPISKYVRE-XFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQR 244
L YN+ P P V+ + L+ ++ E+ + T VW +W D +L+W D + VP +I IP I+ + E H A ++ +GTV K C P+D NC + WT++ A IDL ++ +T VDL Y E+ ++N S+ Y Y + Y F+++R
Sbjct: 68 LFRGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPADFDNITSLRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSSGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLVQMEQT--VDLKDY-WESGEWAIVNATGTYNSKKYDCCAEIYPDVTYAFVIRR 265
BLAST of EMLSAG00000003222 vs. GO
Match: - (symbol:Chrna2 "Neuronal acetylcholine receptor subunit alpha-2" species:10116 "Rattus norvegicus" [GO:0006812 "cation transport" evidence=IDA] [GO:0015464 "acetylcholine receptor activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254 InterPro:IPR018000 RGD:621533 GO:GO:0051291 GO:GO:0008144 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 Gene3D:1.20.120.370 Gene3D:2.70.170.10 InterPro:IPR027361 PANTHER:PTHR18945 SUPFAM:SSF63712 SUPFAM:SSF90112 TIGRFAMs:TIGR00860 PROSITE:PS00236 TreeFam:TF315605 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756 OrthoDB:EOG72JWGV ChEMBL:CHEMBL2094110 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464 CTD:1135 KO:K04804 GuidetoPHARMACOLOGY:463 OMA:ACAGHVA GeneTree:ENSGT00740000115194 EMBL:L10077 EMBL:M20297 EMBL:M20292 EMBL:M20293 EMBL:M20294 EMBL:M20295 EMBL:M20296 EMBL:AY574253 PIR:A40110 RefSeq:NP_596911.1 UniGene:Rn.9713 ProteinModelPortal:P12389 SMR:P12389 STRING:10116.ENSRNOP00000023475 BindingDB:P12389 PhosphoSite:P12389 PaxDb:P12389 Ensembl:ENSRNOT00000023475 GeneID:170945 KEGG:rno:170945 UCSC:RGD:621533 InParanoid:P12389 NextBio:621469 PRO:PR:P12389 Genevestigator:P12389 Uniprot:P12389) HSP 1 Score: 53.9138 bits (128), Expect = 5.441e-7 Identity = 54/201 (26.87%), Postives = 83/201 (41.29%), Query Frame = 0
Query: 50 LLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKWIDDTSNEVL---VPKRLIHIPGILPISKYVRE-XFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQR 244
L YN+ P P V+ + L+ ++ E+ + T VW +W D +L+W V VP +I IP I+ + E H A ++ GTV K C P+D NC + WT++ A IDL ++ T VDL Y E+ +IN S+ Y Y + Y F+++R
Sbjct: 43 LFGGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWDPAEFGNVTSLRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQMERT--VDLKDY-WESGEWAIINATGTYNSKKYDCCAEIYPDVTYYFVIRR 240
BLAST of EMLSAG00000003222 vs. GO
Match: - (symbol:Chrna2 "cholinergic receptor, nicotinic, alpha 2 (neuronal)" species:10116 "Rattus norvegicus" [GO:0004889 "acetylcholine-activated cation-selective channel activity" evidence=ISO;IDA] [GO:0005892 "acetylcholine-gated channel complex" evidence=ISO;IDA] [GO:0006812 "cation transport" evidence=ISO;IDA] [GO:0007165 "signal transduction" evidence=ISO] [GO:0008144 "drug binding" evidence=IDA] [GO:0015464 "acetylcholine receptor activity" evidence=IEA;ISO] [GO:0016020 "membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0051291 "protein heterooligomerization" evidence=IDA] [GO:0071944 "cell periphery" evidence=ISO] InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254 InterPro:IPR018000 RGD:621533 GO:GO:0051291 GO:GO:0008144 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 Gene3D:1.20.120.370 Gene3D:2.70.170.10 InterPro:IPR027361 PANTHER:PTHR18945 SUPFAM:SSF63712 SUPFAM:SSF90112 TIGRFAMs:TIGR00860 PROSITE:PS00236 TreeFam:TF315605 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756 OrthoDB:EOG72JWGV ChEMBL:CHEMBL2094110 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464 CTD:1135 KO:K04804 GuidetoPHARMACOLOGY:463 OMA:ACAGHVA GeneTree:ENSGT00740000115194 EMBL:L10077 EMBL:M20297 EMBL:M20292 EMBL:M20293 EMBL:M20294 EMBL:M20295 EMBL:M20296 EMBL:AY574253 PIR:A40110 RefSeq:NP_596911.1 UniGene:Rn.9713 ProteinModelPortal:P12389 SMR:P12389 STRING:10116.ENSRNOP00000023475 BindingDB:P12389 PhosphoSite:P12389 PaxDb:P12389 Ensembl:ENSRNOT00000023475 GeneID:170945 KEGG:rno:170945 UCSC:RGD:621533 InParanoid:P12389 NextBio:621469 PRO:PR:P12389 Genevestigator:P12389 Uniprot:P12389) HSP 1 Score: 53.9138 bits (128), Expect = 5.441e-7 Identity = 54/201 (26.87%), Postives = 83/201 (41.29%), Query Frame = 0
Query: 50 LLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKWIDDTSNEVL---VPKRLIHIPGILPISKYVRE-XFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQR 244
L YN+ P P V+ + L+ ++ E+ + T VW +W D +L+W V VP +I IP I+ + E H A ++ GTV K C P+D NC + WT++ A IDL ++ T VDL Y E+ +IN S+ Y Y + Y F+++R
Sbjct: 43 LFGGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWDPAEFGNVTSLRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQMERT--VDLKDY-WESGEWAIINATGTYNSKKYDCCAEIYPDVTYYFVIRR 240
BLAST of EMLSAG00000003222 vs. GO
Match: - (symbol:CHRNA2 "Neuronal acetylcholine receptor subunit alpha-2" species:9606 "Homo sapiens" [GO:0004889 "acetylcholine-activated cation-selective channel activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS] [GO:0005892 "acetylcholine-gated channel complex" evidence=IDA] [GO:0006811 "ion transport" evidence=NAS] [GO:0006812 "cation transport" evidence=IDA] [GO:0007165 "signal transduction" evidence=IDA] [GO:0007268 "synaptic transmission" evidence=TAS] [GO:0008144 "drug binding" evidence=IEA] [GO:0015464 "acetylcholine receptor activity" evidence=IDA] [GO:0016021 "integral component of membrane" evidence=NAS] [GO:0030054 "cell junction" evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0051291 "protein heterooligomerization" evidence=IEA] Reactome:REACT_13685 InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254 InterPro:IPR018000 GO:GO:0051291 GO:GO:0008144 GO:GO:0030054 GO:GO:0045211 Gene3D:1.20.120.370 Gene3D:2.70.170.10 InterPro:IPR027361 PANTHER:PTHR18945 SUPFAM:SSF63712 SUPFAM:SSF90112 TIGRFAMs:TIGR00860 PROSITE:PS00236 DrugBank:DB01199 TreeFam:TF315605 DrugBank:DB01245 DrugBank:DB00483 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 DrugBank:DB00184 HOGENOM:HOG000006756 OrthoDB:EOG72JWGV eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464 CTD:1135 KO:K04804 EMBL:U62431 EMBL:Y16281 EMBL:AF311103 EMBL:BC153866 RefSeq:NP_000733.2 UniGene:Hs.57718 ProteinModelPortal:Q15822 SMR:Q15822 STRING:9606.ENSP00000240132 BindingDB:Q15822 ChEMBL:CHEMBL2109236 DrugBank:DB00732 DrugBank:DB00810 DrugBank:DB00411 DrugBank:DB00565 DrugBank:DB00514 DrugBank:DB01334 DrugBank:DB01135 DrugBank:DB00504 DrugBank:DB00657 DrugBank:DB01336 DrugBank:DB00416 DrugBank:DB01226 DrugBank:DB01337 DrugBank:DB01338 DrugBank:DB00728 GuidetoPHARMACOLOGY:463 PhosphoSite:Q15822 DMDM:308153405 PaxDb:Q15822 PRIDE:Q15822 Ensembl:ENST00000407991 Ensembl:ENST00000520933 GeneID:1135 KEGG:hsa:1135 UCSC:uc010lur.3 GeneCards:GC08M027374 H-InvDB:HIX0034372 HGNC:HGNC:1956 MIM:118502 MIM:610353 neXtProt:NX_Q15822 Orphanet:98784 PharmGKB:PA26489 InParanoid:Q15822 OMA:ACAGHVA PhylomeDB:Q15822 ChiTaRS:CHRNA2 GeneWiki:CHRNA2 GenomeRNAi:1135 NextBio:4722 PRO:PR:Q15822 ArrayExpress:Q15822 Bgee:Q15822 CleanEx:HS_CHRNA2 Genevestigator:Q15822 Uniprot:Q15822) HSP 1 Score: 53.9138 bits (128), Expect = 5.671e-7 Identity = 54/201 (26.87%), Postives = 86/201 (42.79%), Query Frame = 0
Query: 50 LLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKW-IDDTSN--EVLVPKRLIHIPGILPISKYVRE-XFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQR 244
L YN+ P P V+ + L+ ++ E+ + T VW +W D +L+W D N + VP +I IP I+ + E H A ++ GTV K C P+D NC + WT++ A IDL ++ +T VDL Y E+ ++N S+ Y Y + Y F+++R
Sbjct: 66 LFRGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPTDFGNITSLRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQMEQT--VDLKDY-WESGEWAIVNATGTYNSKKYDCCAEIYPDVTYAFVIRR 263
BLAST of EMLSAG00000003222 vs. GO
Match: - (symbol:CHRNA2 "Neuronal acetylcholine receptor subunit alpha-2" species:9031 "Gallus gallus" [GO:0004889 "acetylcholine-activated cation-selective channel activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254 InterPro:IPR018000 GO:GO:0016021 GO:GO:0030054 GO:GO:0045211 GO:GO:0006812 GO:GO:0034220 Gene3D:1.20.120.370 Gene3D:2.70.170.10 InterPro:IPR027361 PANTHER:PTHR18945 SUPFAM:SSF63712 SUPFAM:SSF90112 TIGRFAMs:TIGR00860 PROSITE:PS00236 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756 eggNOG:NOG290206 EMBL:X07339 EMBL:X07340 EMBL:X07341 EMBL:X07342 EMBL:X07343 EMBL:X07344 EMBL:AJ250360 PIR:S00377 RefSeq:NP_990146.1 UniGene:Gga.337 ProteinModelPortal:P09480 SMR:P09480 STRING:9031.ENSGALP00000030930 GeneID:395607 KEGG:gga:395607 CTD:1135 KO:K04804 NextBio:20815680 Uniprot:P09480) HSP 1 Score: 53.1434 bits (126), Expect = 9.418e-7 Identity = 54/210 (25.71%), Postives = 87/210 (41.43%), Query Frame = 0
Query: 41 MAQHPAINTLLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKWID---DTSNEVLVPKRLIHIPGILPISKYVRE-XFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQR 244
A+ L + YN+ + P P V+ + L+ ++ E+ + T VW +W D +L+W D + VP +I IP I+ + E H A ++ NG V K C P+D NC + WT++ A IDL + VDL Y E+ +IN + S+ Y Y I + F+++R
Sbjct: 32 FAEDRLFKHLFTGYNRWSRPVPNTSDVVIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSNGKVKWVPPAIYKSSCSIDVTYFPFDQQNCKMKFGSWTYDKAKIDLENMEH--HVDLKDY-WESGEWAIINAIGRYNSKKYDCCTEIYPDITFYFVIRR 238
BLAST of EMLSAG00000003222 vs. GO
Match: - (symbol:CHRNA2 "Neuronal acetylcholine receptor subunit alpha-2" species:9031 "Gallus gallus" [GO:0004889 "acetylcholine-activated cation-selective channel activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex" evidence=IEA] [GO:0015464 "acetylcholine receptor activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254 InterPro:IPR018000 GO:GO:0016021 GO:GO:0030054 GO:GO:0045211 GO:GO:0006812 GO:GO:0034220 Gene3D:1.20.120.370 Gene3D:2.70.170.10 InterPro:IPR027361 PANTHER:PTHR18945 SUPFAM:SSF63712 SUPFAM:SSF90112 TIGRFAMs:TIGR00860 PROSITE:PS00236 GO:GO:0004889 OrthoDB:EOG72JWGV GeneTree:ENSGT00740000115194 EMBL:AADN03003149 Ensembl:ENSGALT00000026738 Uniprot:F1NHP4) HSP 1 Score: 53.1434 bits (126), Expect = 1.033e-6 Identity = 54/210 (25.71%), Postives = 87/210 (41.43%), Query Frame = 0
Query: 41 MAQHPAINTLLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKWID---DTSNEVLVPKRLIHIPGILPISKYVRE-XFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQR 244
A+ L + YN+ + P P V+ + L+ ++ E+ + T VW +W D +L+W D + VP +I IP I+ + E H A ++ NG V K C P+D NC + WT++ A IDL + VDL Y E+ +IN + S+ Y Y I + F+++R
Sbjct: 32 FAEDRLFKHLFTGYNRWSRPVPNTSDVVIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSNGKVKWVPPAIYKSSCSIDVTYFPFDQQNCKMKFGSWTYDKAKIDLENMEH--HVDLKDY-WESGEWAIINAIGRYNSKKYDCCTEIYPDITFYFVIRR 238
BLAST of EMLSAG00000003222 vs. GO
Match: - (symbol:Chrna2 "cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal)" species:10090 "Mus musculus" [GO:0004889 "acetylcholine-activated cation-selective channel activity" evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex" evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006812 "cation transport" evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO] [GO:0008144 "drug binding" evidence=ISO] [GO:0015464 "acetylcholine receptor activity" evidence=ISO] [GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0042166 "acetylcholine binding" evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0051291 "protein heterooligomerization" evidence=ISO] [GO:0071944 "cell periphery" evidence=IDA] InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254 InterPro:IPR018000 MGI:MGI:87886 GO:GO:0051291 GO:GO:0008144 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0006812 GO:GO:0034220 Gene3D:1.20.120.370 Gene3D:2.70.170.10 InterPro:IPR027361 PANTHER:PTHR18945 SUPFAM:SSF63712 SUPFAM:SSF90112 TIGRFAMs:TIGR00860 PROSITE:PS00236 TreeFam:TF315605 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756 OrthoDB:EOG72JWGV eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464 CTD:1135 KO:K04804 EMBL:AY574261 EMBL:BC011490 RefSeq:NP_659052.1 RefSeq:XP_006518497.1 RefSeq:XP_006518498.1 RefSeq:XP_006518499.1 RefSeq:XP_006518500.1 RefSeq:XP_006518501.1 UniGene:Mm.57350 ProteinModelPortal:Q91X60 SMR:Q91X60 PhosphoSite:Q91X60 PRIDE:Q91X60 Ensembl:ENSMUST00000022620 GeneID:110902 KEGG:mmu:110902 UCSC:uc007ujx.1 GeneTree:ENSGT00740000115194 InParanoid:Q91X60 OMA:EDENICM NextBio:364901 PRO:PR:Q91X60 ArrayExpress:Q91X60 Bgee:Q91X60 Genevestigator:Q91X60 GO:GO:0071944 Uniprot:Q91X60) HSP 1 Score: 52.7582 bits (125), Expect = 1.049e-6 Identity = 53/201 (26.37%), Postives = 83/201 (41.29%), Query Frame = 0
Query: 50 LLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKWIDDTSNEVL---VPKRLIHIPGILPISKYVRE-XFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQR 244
L YN+ P P V+ + L+ ++ E+ + T VW +W D +L+W + VP +I IP I+ + E H A ++ GTV K C P+D NC + WT++ A IDL ++ T VDL Y E+ +IN S+ Y Y + Y F+++R
Sbjct: 43 LFGGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWDPAEFGNITSLRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQMERT--VDLKDY-WESGEWAIINATGTYNSKKYDCCAEIYPDVTYYFVIRR 240
BLAST of EMLSAG00000003222 vs. C. finmarchicus
Match: gi|592823086|gb|GAXK01131482.1| (TSA: Calanus finmarchicus comp161957_c0_seq1 transcribed RNA sequence) HSP 1 Score: 68.9366 bits (167), Expect = 1.462e-12 Identity = 52/192 (27.08%), Postives = 84/192 (43.75%), Query Frame = 0
Query: 72 LSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWI----DDTSNEVLVPKRLIHIPGILPISKYVREXFDHRELAT----------IYRNGTVFLNQRVRIKVPCDGYTWDN-PWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWLV 248
L L P +L G L +W W D RL W D+ ++ ++ P L +S Y ++ DH LA I NG + V KV C+G T+ N PW C+ ++ WTH+S + DL+ G D +DL ++ N K++ E + Y Y+ + + F ++R ++V
Sbjct: 228 LGLAPSWMDLDSNGVLTAILWLRLTWSDYRLSWDPEDHDNITSLLITPDELWKPD----VSLYNKQDLDHGILAADPRSANTNAHIASNGNILWILPVSHKVLCEGITYSNWPWGTQTCNLSFGSWTHDSMSYDLQFYGGLDKMDLRQFGEHN-QFKILKQEGLREVKKYDCCPNPYVNLNFFFSIKRKYVV 788
BLAST of EMLSAG00000003222 vs. C. finmarchicus
Match: gi|592864736|gb|GAXK01092826.1| (TSA: Calanus finmarchicus comp614976_c0_seq1 transcribed RNA sequence) HSP 1 Score: 51.2174 bits (121), Expect = 1.133e-6 Identity = 44/170 (25.88%), Postives = 70/170 (41.18%), Query Frame = 0
Query: 46 AINTLLSTYNKVTPPYPENKGVIFLYLSLTPICF-ELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNEVLV----PKRL----IHIPGILPISKY-VREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDN-PWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSK 204
+N+LL YN+ P + I + L I +L++ G L T W W+D RL W V V P +L I + S++ + F A +Y +G V V +KV C +T + P C+ WTH+ ++L D +D+S+
Sbjct: 166 VVNSLLKDYNRHLVPQNSSNHTISVAAGLAIIHVDQLSQTGVLSATAWLRMTWKDYRLAWDKADYGGVTVFRIDPHKLWLPDIEVYNTAETSQFSISSQFTSGTNALVYPDGEVLFIPPVSLKVYCHNFTHSSWPQGEQECNIKLGSWTHDGLVLNLTLYNNKDYMDISE 675
BLAST of EMLSAG00000003222 vs. C. finmarchicus
Match: gi|592893910|gb|GAXK01064465.1| (TSA: Calanus finmarchicus comp584881_c0_seq2 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 2.152e-6 Identity = 42/199 (21.11%), Postives = 77/199 (38.69%), Query Frame = 0
Query: 57 VTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKW----------IDDTSNEVLVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCD-GYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQR 244
++P +N + L L L+ I +++ G L W W D RLKW I +++ P I+ + + LA +Y G V + I V C+ D + C+ WT++ I+L GE+D +DL++ + L + +Y + Y+ + Y F +++
Sbjct: 157 ISPAGDDNDNAVNLALGLSVISMDVSTRGVLSANTWLRTFWTDYRLKWNPADYQGVKSIRVPPSQLWKPDLSIYNAANVGCGSFEERLSSSPTLAIVYSTGDVLWMPPIPIDVNCNHDKVMVTSNDEIACNIRIGSWTYDGNHINLTSFGESDILDLNEMSSNTAYDVTSQKGDALATSHYPCCSEPYIAMDYQFTVKK 753
BLAST of EMLSAG00000003222 vs. C. finmarchicus
Match: gi|592893911|gb|GAXK01064464.1| (TSA: Calanus finmarchicus comp584881_c0_seq1 transcribed RNA sequence) HSP 1 Score: 49.6766 bits (117), Expect = 3.103e-6 Identity = 42/199 (21.11%), Postives = 77/199 (38.69%), Query Frame = 0
Query: 57 VTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKW----------IDDTSNEVLVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCD-GYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQR 244
++P +N + L L L+ I +++ G L W W D RLKW I +++ P I+ + + LA +Y G V + I V C+ D + C+ WT++ I+L GE+D +DL++ + L + +Y + Y+ + Y F +++
Sbjct: 157 ISPAGDDNDNAVNLALGLSVISMDVSTRGVLSANTWLRTFWTDYRLKWNPADYQGVKSIRVPPSQLWKPDLSIYNAANVGCGSFEERLSSSPTLAIVYSTGDVLWMPPIPIDVNCNHDKVMVTSNDEIACNIRIGSWTYDGNHINLTSFGESDILDLNEMSSNTAYDVTSQKGDALATSHYPCCSEPYIAMDYQFTVKK 753
BLAST of EMLSAG00000003222 vs. C. finmarchicus
Match: gi|592791742|gb|GAXK01162826.1| (TSA: Calanus finmarchicus comp1239661_c0_seq1 transcribed RNA sequence) HSP 1 Score: 47.7506 bits (112), Expect = 1.588e-5 Identity = 53/213 (24.88%), Postives = 94/213 (44.13%), Query Frame = 0
Query: 47 INTLLSTYNKVTPPYPE--NKGVIFLYLSLTPICFEL-TEEGDLEGTVWYHWKWEDSRLKWI----DDTSNEVLVPKRLIHIPGILPISKYVREXFDHRELATIYRN-GTVFLNQRVRIKVPCDGYTWDN-PWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLING--ETKLWSEYYGHQNYGYLYIKYLFLLQRNWLV 248
I +L Y+ + P + ++GV + +++ P+ + TE L VW+ KW D+RLKW+ ++ S L P++ I P I+ + E FD+ + + N G V+ V + CD W PWD C WT +D++ L + + + L+ G E +L +Y G +Y ++ I ++ R L+
Sbjct: 107 IKDILKDYSPSSRPAGKVSDRGV-SMGINIVPLHVNVDTETSTLNSHVWFVMKWTDTRLKWVPTNYENVSTIHLAPEK-IWRPDIMVYNSV--EHFDYEKTELLVLNDGQVWWVPPVNLHTSCD-LDWTYWPWDRQTCHLVVGSWTKTGWELDIQNLNGQNRTKVDSANFAKGAWDLVGGVQERRLNDDYGGTADY-FVDIDVTLIMDRRSLL 727
BLAST of EMLSAG00000003222 vs. C. finmarchicus
Match: gi|592848272|gb|GAXK01109272.1| (TSA: Calanus finmarchicus comp390366_c0_seq1 transcribed RNA sequence) HSP 1 Score: 48.1358 bits (113), Expect = 1.698e-5 Identity = 43/168 (25.60%), Postives = 80/168 (47.62%), Query Frame = 0
Query: 47 INTLLSTYNK-VTPPYPENKGVIF-LYLSLTPICFELTEEGDLEGT-VWYHWKWEDSRLKWIDDTSN---EVLVPKRLIHIPGIL---PISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKY 205
+N L++ Y++ V P Y +K V+ + ++LT I F++ E+ + T +W +W+D ++W N ++ VP + +P I+ Y + F R LAT+ G VF + + C P+D C+ + W ++ +D+ T++VDL Y
Sbjct: 246 LNYLMANYDREVRPVYNASKAVVVRVGITLTQI-FDMDEKNQVMTTNIWLDQEWKDEMMRWDPKDFNGITKLQVPCDKLWLPDIVLYNSADDYSKGYF--RSLATVDHTGNVFWPPPTKFRSTCPVNVMYFPFDDQTCNLKLSSWMYDGTKVDVT--NRTNNVDLENY 734
BLAST of EMLSAG00000003222 vs. C. finmarchicus
Match: gi|592921182|gb|GAXK01037193.1| (TSA: Calanus finmarchicus comp536200_c0_seq1 transcribed RNA sequence) HSP 1 Score: 43.5134 bits (101), Expect = 4.232e-4 Identity = 43/167 (25.75%), Postives = 70/167 (41.92%), Query Frame = 0
Query: 47 INTLLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKWIDDT---SNEVLVPKRLIHIPGILPISKYVREXFD--HRELATIYRNGTVFLNQRVRIKVPCD-GYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKY 205
IN L + YNK+ P + L LT ++ E+ + T +W +W+W D ++W + ++ +P + P IL + E FD + + GT K C TW P+D NC + WT+N +DL+ E+ D+S Y
Sbjct: 271 INDLTANYNKLERPVANESEAVVLKFGLTLQQIMDVDEKNQIITTNIWLNWEWTDVNMRWNESEYGDIKDIRMPPSNLWKPDIL-MYNSASEAFDGTYPTNVVVTSKGTCTYIPPGIFKSSCQIDITW-FPFDDQNCEMKFGSWTYNGFKLDLKSNSESGG-DVSTY 762
BLAST of EMLSAG00000003222 vs. C. finmarchicus
Match: gi|592921181|gb|GAXK01037194.1| (TSA: Calanus finmarchicus comp536200_c0_seq2 transcribed RNA sequence) HSP 1 Score: 43.5134 bits (101), Expect = 4.267e-4 Identity = 43/167 (25.75%), Postives = 70/167 (41.92%), Query Frame = 0
Query: 47 INTLLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKWIDDT---SNEVLVPKRLIHIPGILPISKYVREXFD--HRELATIYRNGTVFLNQRVRIKVPCD-GYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKY 205
IN L + YNK+ P + L LT ++ E+ + T +W +W+W D ++W + ++ +P + P IL + E FD + + GT K C TW P+D NC + WT+N +DL+ E+ D+S Y
Sbjct: 271 INDLTANYNKLERPVANESEAVVLKFGLTLQQIMDVDEKNQIITTNIWLNWEWTDVNMRWNESEYGDIKDIRMPPSNLWKPDIL-MYNSASEAFDGTYPTNVVVTSKGTCTYIPPGIFKSSCQIDITW-FPFDDQNCEMKFGSWTYNGFKLDLKSNSESGG-DVSTY 762
BLAST of EMLSAG00000003222 vs. C. finmarchicus
Match: gi|592866093|gb|GAXK01091469.1| (TSA: Calanus finmarchicus comp260470_c1_seq1 transcribed RNA sequence) HSP 1 Score: 42.3578 bits (98), Expect = 8.335e-4 Identity = 37/180 (20.56%), Postives = 66/180 (36.67%), Query Frame = 0
Query: 33 IYSIHTSFMAQHPAINTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKW-------IDDTSNEVLVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKY 205
I+S + L Y P + + + L +T ++ L G W + +W D L W + + ++ + I +P I + RE R++ + G V ++ C T P+D C + WT N ++L K+ TD +D+S Y
Sbjct: 28 IFSTAEGSSQEKTLTKRFLEDYVVSARPVKNDSKAVEVSLGVTLHSITKIDKNSLSGIFWLNMEWVDENLAWRSGDWDDVFEKVGDIRLSTEDIWVPDIELFNMIEREPLITRDMVVVSDTGAVIWVPPYKMISSCKIDTTWFPFDEQRCDLKFGSWTFNGFKLNL-KMKVTDGMDISSY 564
BLAST of EMLSAG00000003222 vs. C. finmarchicus
Match: gi|592853875|gb|GAXK01103669.1| (TSA: Calanus finmarchicus comp166907_c0_seq2 transcribed RNA sequence) HSP 1 Score: 41.9726 bits (97), Expect = 1.578e-3 Identity = 42/164 (25.61%), Postives = 67/164 (40.85%), Query Frame = 0
Query: 50 LLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKWID---DTSNEVLVPKRLIHIPGILPISKYVREXFDHR---ELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKY 205
LL+ YNK+ P + L LT ++ E+ + T VW + +W D L W + +V +P + P IL + E FD + ++ + + TW P+D NC + WT+N +DL KL +D D+S Y
Sbjct: 1036 LLAYYNKLERPVANESEAVVLTFGLTLQQIIDVDEKNQILTTNVWLNLEWNDVNLAWNETEYGNVQDVRIPPSSLWKPDIL-MYNSASEAFDGTYPTNVVVTSSGSCTYIPPGIFMSTCKIDITW-FPFDDQNCEMKFGSWTYNGFKLDL-KLKSSDGGDISTY 1518
BLAST of EMLSAG00000003222 vs. L. salmonis peptides
Match: EMLSAP00000003222 (pep:novel supercontig:LSalAtl2s:LSalAtl2s177:50291:51169:-1 gene:EMLSAG00000003222 transcript:EMLSAT00000003222 description:"maker-LSalAtl2s177-snap-gene-0.6") HSP 1 Score: 520.776 bits (1340), Expect = 0.000e+0 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
Query: 1 MSLLNSINSVTTTMNTTTNHLLNLLLVLLLNKIYSIHTSFMAQHPAINTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNEVLVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWLVQSYDKH 254
MSLLNSINSVTTTMNTTTNHLLNLLLVLLLNKIYSIHTSFMAQHPAINTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNEVLVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWLVQSYDKH
Sbjct: 1 MSLLNSINSVTTTMNTTTNHLLNLLLVLLLNKIYSIHTSFMAQHPAINTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNEVLVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWLVQSYDKH 254
BLAST of EMLSAG00000003222 vs. L. salmonis peptides
Match: EMLSAP00000009380 (pep:novel supercontig:LSalAtl2s:LSalAtl2s59:537101:537984:-1 gene:EMLSAG00000009380 transcript:EMLSAT00000009380 description:"maker-LSalAtl2s59-snap-gene-5.30") HSP 1 Score: 104.375 bits (259), Expect = 1.673e-26 Identity = 66/233 (28.33%), Postives = 115/233 (49.36%), Query Frame = 0
Query: 21 LLNLLLVLLLNKIYSIHTSFMAQHPAI-NTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSN--EVLVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWLVQS 250
L+ +++L + + S +A+H ++ + L ++Y+ + PY NK ++ + LTPI ++TE G +EG WY+ W D RL+W ++ N ++ + K +I P I+P+S V E D R A + G + RV ++ C+G NPW NCS Y W+H +D + +++ + + N PV +I E + + Y I L+RN L+ S
Sbjct: 4 LITPSIIILFSVATASANSVIAEHESLMHDLFASYSVFSGPYHSNKPLL-IGFHLTPIYIDVTEXGFIEGEFWYNLAWNDFRLRWDEEARNIRDLHISKEIIWTPDIVPLSGDVVETIDDRRSAILDYKGEIIFFPRVFLRGRCNGVDLWNPWKEFNCSLKYGSWSHTKEYLDFTNIVQSEPIFFNDLSN---PVNVIRISVSKEFENRNNDDKIYAVINIKLTLKRNRLIYS 232
BLAST of EMLSAG00000003222 vs. L. salmonis peptides
Match: EMLSAP00000008789 (pep:novel supercontig:LSalAtl2s:LSalAtl2s546:116340:118829:1 gene:EMLSAG00000008789 transcript:EMLSAT00000008789 description:"maker-LSalAtl2s546-augustus-gene-1.9") HSP 1 Score: 87.0409 bits (214), Expect = 1.531e-20 Identity = 62/231 (26.84%), Postives = 113/231 (48.92%), Query Frame = 0
Query: 27 VLLLNKIYSIHTSFMA-QHPAINTLLSTYN-KVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTS---NEVLVPKRLIHIPGILPISKY----VREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWLV 248
++LL ++ + S+ + Q + L S Y+ V P P + G + S +P+C +L+ +G LEG +W H W D RL W + N++ VP + P I+P K ++E F+ A +Y NG + ++++ CD + W + C+ Y WT ++ ++L + D VD+S++ + CP+K ++ +L + Y Y + Y LQR +L+
Sbjct: 5 MILLLSLFFLRVSYGSPQGELVKKLFSDYDLSVYPGTPTSIGKV--EFSASPLCMDLSLDGVLEGRMWVHMSWMDDRLVWTPEDHEGINQLRVPINKLWKPDIVPYIKKDITEIQEEFN----AIVYSNGKILYVPDTKLRIDCDNANLTDVWAVNECTIKYGSWTFDNDMMELVQF--KDPVDISEF-VKLCPIKTLDVMKELKLKIYECCPEPYASLDYTLKLQRKFLI 226
BLAST of EMLSAG00000003222 vs. L. salmonis peptides
Match: EMLSAP00000003233 (pep:novel supercontig:LSalAtl2s:LSalAtl2s178:159770:165601:1 gene:EMLSAG00000003233 transcript:EMLSAT00000003233 description:"augustus_masked-LSalAtl2s178-processed-gene-1.1") HSP 1 Score: 82.4185 bits (202), Expect = 5.966e-19 Identity = 50/169 (29.59%), Postives = 75/169 (44.38%), Query Frame = 0
Query: 48 NTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNEVL-VPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLI 215
N +L YN P N + + ++P C L G + G +WY W D RL W + E L +P LI P I+P +D + ++ NG V V K C T + I+ C+ + WT++S ++L G SVD S YD + CP K++
Sbjct: 34 NEVLKDYNPAARPNDLNGNIGNVTFGISPTCLNLRYYGLVFGNIWYKINWYDPRLTWNSSSGVESLSLPNDLIWKPDIVPFFGRDGTHYDSKYPVKVFPNGMVLFVPSVEFKHRCFRQTKRSARKIIRCNVEFGSWTYDSEIMNLNFFGGKASVDTSTYDFDFCPTKIL 202
BLAST of EMLSAG00000003222 vs. L. salmonis peptides
Match: EMLSAP00000007149 (pep:novel supercontig:LSalAtl2s:LSalAtl2s402:878025:878915:1 gene:EMLSAG00000007149 transcript:EMLSAT00000007149 description:"maker-LSalAtl2s402-snap-gene-8.11") HSP 1 Score: 71.2478 bits (173), Expect = 3.905e-15 Identity = 60/229 (26.20%), Postives = 108/229 (47.16%), Query Frame = 0
Query: 22 LNLLLVLLLNKIYSIHTSFMAQHPAINTLLSTYN-KVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNEVLVPKRLIHIPG--ILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWL 247
+N ++ LL+ + + Q + L + Y+ V P P + G + + P+C +L+ +G LEG VW H W D RL W + ++ + RLI+ + ISK ++E F+ A +Y NG V ++++ CD + W + C+ Y WT ++ ++L ++ VD+S++ + CP+K + +L + Y Y Y LQR +L
Sbjct: 1 MNSKMIFLLSFFFLGVSYGSPQGELVKKLFADYDLSVHPGSPNSIGKV--EFTANPLCMDLSLDGVLEGRVWIHMSWMDDRLVW-NPEDHKGINQLRLINCGSQTLCHISK-IQEEFN----ALVYSNGKVLYIPDTKLRLYCDNANLTDVWAVHECNIKYGSWTFDNNLMELVEIKH--PVDVSEF-VKFCPMKTLEVIKELKIKAYVCCPEHYASFDYTLKLQRKFL 218
BLAST of EMLSAG00000003222 vs. L. salmonis peptides
Match: EMLSAP00000007364 (pep:novel supercontig:LSalAtl2s:LSalAtl2s419:308585:312911:1 gene:EMLSAG00000007364 transcript:EMLSAT00000007364 description:"augustus_masked-LSalAtl2s419-processed-gene-2.1") HSP 1 Score: 46.9802 bits (110), Expect = 3.086e-7 Identity = 34/109 (31.19%), Postives = 48/109 (44.04%), Query Frame = 0
Query: 25 LLVLLLNKIYSIHTSFMAQHPAINTLLSTY---NKVTPPYPENKG--VIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNEVL-VPKRLIHIPGILPI 127
+ + +L+ IY+++T + P L N P NKG + + PIC L G + G VWY W D RLKW + E L +P L+ P ILP
Sbjct: 1 MWIEILSFIYAVNTVMSGKPPNYTQTLKKIIFENYDASVMPNNKGGNIGNVTFGFNPICLHLNNFGRVSGYVWYEITWYDERLKWDNFKDIESLSLPHNLVWKPDILPF 109
BLAST of EMLSAG00000003222 vs. SwissProt
Match: gi|61211728|sp|Q5IS52.1|ACHA2_PANTR (RecName: Full=Neuronal acetylcholine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 54.299 bits (129), Expect = 3.115e-7 Identity = 54/201 (26.87%), Postives = 86/201 (42.79%), Query Frame = 0
Query: 50 LLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKW-IDDTSN--EVLVPKRLIHIPGILPISKYVRE-XFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQR 244
L YN+ P P V+ + L+ ++ E+ + T VW +W D +L+W D N + VP +I IP I+ + E H A ++ GTV K C P+D NC + WT++ A IDL ++ +T VDL Y E+ ++N S+ Y Y + Y F+++R
Sbjct: 66 LFRGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPADFGNITSLRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQMEQT--VDLKDY-WESGEWAIVNATGTYNSKKYDCCAEIYPDVTYAFIIRR 263
BLAST of EMLSAG00000003222 vs. SwissProt
Match: gi|308153405|sp|Q15822.2|ACHA2_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 53.9138 bits (128), Expect = 4.177e-7 Identity = 54/201 (26.87%), Postives = 86/201 (42.79%), Query Frame = 0
Query: 50 LLSTYNKVTPPYPENKGVIFLYLSLT-PICFELTEEGDLEGT-VWYHWKWEDSRLKW-IDDTSN--EVLVPKRLIHIPGILPISKYVRE-XFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQR 244
L YN+ P P V+ + L+ ++ E+ + T VW +W D +L+W D N + VP +I IP I+ + E H A ++ GTV K C P+D NC + WT++ A IDL ++ +T VDL Y E+ ++N S+ Y Y + Y F+++R
Sbjct: 66 LFRGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPTDFGNITSLRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQMEQT--VDLKDY-WESGEWAIVNATGTYNSKKYDCCAEIYPDVTYAFVIRR 263
BLAST of EMLSAG00000003222 vs. Select Arthropod Genomes
Match: EFX86859.1 (hypothetical protein DAPPUDRAFT_43557 [Daphnia pulex]) HSP 1 Score: 54.299 bits (129), Expect = 1.272e-7 Identity = 46/167 (27.54%), Postives = 73/167 (43.71%), Query Frame = 0
Query: 48 NTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLE-------GTVWYHWKWEDSRLKWIDDT---SNEVLVPKRLIHIPGIL----PISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSV 200
+ LLS YN++ P N V+ + L L L++ DL+ VW W DS+L W D +++VP L+ +P IL +YV A ++ +G V N K C+ P+D C + PW+HN +DLR + +D++
Sbjct: 48 DDLLSHYNRLIRPVSNNSEVVTVRLGL-----HLSQLIDLDLKNQILTTNVWVEHDWMDSKLNWEPDEYGGVEQLIVPSELLWLPDILLYNNADGEYVVTTMTK---AILHYDGHVKWNPPAIFKSYCEIDVEWFPFDTQTCFLKFGPWSHNGLQMDLRHINSSDNL 206
BLAST of EMLSAG00000003222 vs. nr
Match: gi|225711280|gb|ACO11486.1| (Neuronal acetylcholine receptor subunit alpha-3 precursor [Caligus rogercresseyi]) HSP 1 Score: 95.9005 bits (237), Expect = 3.615e-20 Identity = 63/234 (26.92%), Postives = 115/234 (49.15%), Query Frame = 0
Query: 19 NHLLNLLLVLLLNKIYSIHTSFMAQHPAI-NTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSN--EVLVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLY--IKYLFLLQRNWL 247
+ +L+L+ + LL I S ++ H ++ + L S YN ++ P +K ++ + +TP F++ ++G +EG WY W W DSRL W + ++ + V + +I P I+P+S V+E FD R A + +G V + +V ++ C G + +PW C+ + W+ ID + + Y++ + PV L L +Y G +Y ++ +LQR L
Sbjct: 2 DQMLHLVTLFLLFWTSHIQCSRLSIHQSLRDELFSDYNPLSAPLDPSKPIL-IQFHITPKYFDVRDDGFIEGEFWYSWVWRDSRLTWNETVASVPRIRVDRDMIWRPDIVPLSGDVKEEFDDRISALVDNDGQVTWSPKVFLRARCSGANFKDPWKEFRCTLKFGSWSLPRDIIDFYEGSAS-----GMYNDPDSPVDL--KAMTLNKDYEERHQNGKIYSVLRVDMILQRRRL 227
BLAST of EMLSAG00000003222 vs. nr
Match: gi|225709802|gb|ACO10747.1| (Neuronal acetylcholine receptor subunit alpha-3 precursor [Caligus rogercresseyi]) HSP 1 Score: 93.9745 bits (232), Expect = 1.114e-19 Identity = 55/199 (27.64%), Postives = 101/199 (50.75%), Query Frame = 0
Query: 19 NHLLNLLLVLLLNKIYSIHTSFMAQHPAI-NTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSN--EVLVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKL 214
+ +L+L+ + LL I S ++ H ++ + L S YN ++ P +K ++ + +TP F++ ++G +EG WY W W DSRL W + ++ + V + +I P I+P+S V+E FD R A + +G V + +V ++ C G + +PW C+ Y W ID + + Y++ + PV +
Sbjct: 2 DQMLHLVTLFLLFWTSHIQCSRLSIHQSLRDELFSDYNPLSAPLDPSKPIL-IQFHITPKYFDVRDDGFIEGEFWYSWVWRDSRLTWNETEASVPRIRVDRDMIWRPDIVPLSGDVKEEFDDRISALVDNDGQVTWSPKVFLRARCSGANFKDPWKEFRCTLKYGSWNLPRDIIDFYEGSAS-----GMYNDPDSPVDV 194
BLAST of EMLSAG00000003222 vs. nr
Match: gi|225719006|gb|ACO15349.1| (Neuronal acetylcholine receptor subunit alpha-3 precursor [Caligus clemensi]) HSP 1 Score: 93.5893 bits (231), Expect = 2.028e-19 Identity = 59/208 (28.37%), Postives = 99/208 (47.60%), Query Frame = 0
Query: 47 INTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNE-----VLVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGE--TDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWL 247
I L Y+ PP + + ++ P C EL+ +G+LEG +W + W+D RL W ++S E + VP + I +P ++ K + D A +Y +G V +R K+ CD NPW + C+ Y WT +S L +GE +D + ++Y C +K + + +L ++ Y Y +I+Y LQR +L
Sbjct: 25 IGRLFKNYDPAIPPSNSEGIIGKVDFNIRPQCMELSLDGELEGNIWAYQSWQDDRLAW--NSSEESGIELIRVPAKKIWLPDVVLYMKKSAQLVDEEYNAVVYSSGRVIYVPDIRSKMDCDNANLTNPWAVNECNLRYGSWTFDSRLTQL-SIGEHSSDETEYTQY----CSIKTLEIKEELKTKVYDCCPEPYSHIEYKLRLQRKFL 225
BLAST of EMLSAG00000003222 vs. nr
Match: gi|225718814|gb|ACO15253.1| (Neuronal acetylcholine receptor subunit alpha-3 precursor [Caligus clemensi]) HSP 1 Score: 92.4337 bits (228), Expect = 5.726e-19 Identity = 58/208 (27.88%), Postives = 99/208 (47.60%), Query Frame = 0
Query: 47 INTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNE-----VLVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGE--TDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWL 247
I L Y+ PP + + ++ P C EL+ +G+LEG +W + W+D RL W ++S E + VP + +P ++ K + D A +Y +G V +R K+ CD NPW + C+ Y WT +S + L +GE +D + ++Y C +K + + +L ++ Y Y +I+Y LQR +L
Sbjct: 25 IGRLFKNYDPAIPPSNSEGIIGKVDFNIRPQCMELSLDGELEGNIWAYQSWQDDRLAW--NSSEESGIELIRVPAKKNWLPDVVLYMKKSAQLVDEEYNAVVYSSGRVIYVPDIRFKMDCDNANLTNPWAVNECNLRYGSWTFDSRLMQL-SIGEHSSDETEYTQY----CSIKTLEIKEELKTKVYDCCPEPYSHIEYKLRLQRKFL 225
BLAST of EMLSAG00000003222 vs. nr
Match: gi|290562631|gb|ADD38711.1| (Neuronal acetylcholine receptor subunit alpha-3 [Lepeophtheirus salmonis]) HSP 1 Score: 87.0409 bits (214), Expect = 5.514e-17 Identity = 62/231 (26.84%), Postives = 113/231 (48.92%), Query Frame = 0
Query: 27 VLLLNKIYSIHTSFMA-QHPAINTLLSTYN-KVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTS---NEVLVPKRLIHIPGILPISKY----VREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWLV 248
++LL ++ + S+ + Q + L S Y+ V P P + G + S +P+C +L+ +G LEG +W H W D RL W + N++ VP + P I+P K ++E F+ A +Y NG + ++++ CD + W + C+ Y WT ++ ++L + D VD+S++ + CP+K ++ +L + Y Y + Y LQR +L+
Sbjct: 5 MILLLSLFFLRVSYGSPQGELVKKLFSDYDLSVYPGTPTSIGKV--EFSASPLCMDLSLDGVLEGRMWVHMSWMDDRLVWTPEDHEGINQLRVPINKLWKPDIVPYIKKDITEIQEEFN----AIVYSNGKILYVPDTKLRIDCDNANLTDVWAVNECTIKYGSWTFDNDMMELVQF--KDPVDISEF-VKLCPIKTLDVMKELKLKIYECCPEPYASLDYTLKLQRKFLI 226
BLAST of EMLSAG00000003222 vs. nr
Match: gi|225714526|gb|ACO13109.1| (Neuronal acetylcholine receptor subunit alpha-3 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 86.6557 bits (213), Expect = 6.987e-17 Identity = 62/231 (26.84%), Postives = 113/231 (48.92%), Query Frame = 0
Query: 27 VLLLNKIYSIHTSFMA-QHPAINTLLSTYN-KVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTS---NEVLVPKRLIHIPGILPISKY----VREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWLV 248
++LL ++ + S+ + Q + L S Y+ V P P + G + S +P+C +L+ +G LEG +W H W D RL W + N++ VP + P I+P K ++E F+ A +Y NG + ++++ CD + W + C+ Y WT ++ ++L + D VD+S++ + CP+K ++ +L + Y Y + Y LQR +L+
Sbjct: 5 MILLLSLFFLRVSYGSPQGDLVKKLFSDYDLSVHPGTPTSIGKV--EFSASPLCMDLSLDGVLEGRMWVHMSWMDDRLVWTPEDHEGINQLRVPINKLWKPDIVPYIKKDITEIQEEFN----AIVYSNGKILYVPDTKLRIDCDNANLTDIWAVNECTIKYGSWTFDNDMMELVQF--KDPVDISEF-VKLCPIKTLDVMKELKLKIYECCPEPYASLDYTLKLQRKFLI 226
BLAST of EMLSAG00000003222 vs. nr
Match: gi|225709060|gb|ACO10376.1| (Neuronal acetylcholine receptor subunit alpha-3 precursor [Caligus rogercresseyi]) HSP 1 Score: 86.6557 bits (213), Expect = 1.001e-16 Identity = 68/236 (28.81%), Postives = 108/236 (45.76%), Query Frame = 0
Query: 19 NHLLNLLLVLLLNKIYSI-HTSFMAQHPAINTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNEVLVPKRLIH-----IPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWLV 248
N +LN L+LL + ++ S ++ I L Y++ PP ++ + + SL P C EL+ EG+LEG+VW W+D RL W + + V + +H P I+ SK D IY G + RI+V C + +PW + C Y WT++ ++L T V S++ NE CP+KL++ +L + Y Y I+ QR +LV
Sbjct: 5 NKMLNTSLILLCLAVGALGSASSSSKGRLIAELFQDYDRDVPP-GSDELISPVAFSLDPTCMELSSEGELEGSVWERINWQDDRLVWEPKNYSGISVLR--VHNSKLWKPDIVLYSKKSAIYLDPDYNILIYSTGKILSVPDKRIRVHCTNANFTSPWALQECKLKYGSWTYHQGQLELSIRNGTSLV--SEF-NEYCPLKLLDMTNELTIKKYDCCEEDYASIEVKLRFQRQFLV 234
BLAST of EMLSAG00000003222 vs. nr
Match: gi|225714016|gb|ACO12854.1| (Acetylcholine receptor subunit beta-like 1 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 83.1889 bits (204), Expect = 1.707e-15 Identity = 50/169 (29.59%), Postives = 75/169 (44.38%), Query Frame = 0
Query: 48 NTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNEVL-VPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLI 215
N +L YN P N + + ++P C L G + G +WY W D RL W + E L +P LI P I+P +D + ++ NG V V K C T + I+ C+ + WT++S ++L G SVD S YD + CP K++
Sbjct: 34 NEVLKDYNPAARPNDLNGNIGNVTFGISPTCLNLRYYGLVFGNIWYKINWYDPRLTWNSSSGVESLNLPNDLIWKPDIVPFFGRDGTHYDSKYPVKVFSNGMVLFVPSVEFKHRCFRQTKRSARKIIRCNVEFGSWTYDSEIMNLNFFGGKASVDTSTYDFDFCPTKIL 202
BLAST of EMLSAG00000003222 vs. nr
Match: gi|225709282|gb|ACO10487.1| (Neuronal acetylcholine receptor subunit alpha-3 precursor [Caligus rogercresseyi]) HSP 1 Score: 81.2629 bits (199), Expect = 8.439e-15 Identity = 58/207 (28.02%), Postives = 91/207 (43.96%), Query Frame = 0
Query: 47 INTLLSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNEVLVPKRLIH-----IPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWLV 248
I L Y++ PP ++ + + SL P C EL+ EG+LEG+VW W+D RL W + + V + +H P I+ SK D IY G + RI++ C + +PW + C Y WT++ + KL + L NE CP+K+++ +L + Y Y I+ QR +LV
Sbjct: 29 IAELFQDYDRDVPP-GSDELISPVAFSLDPTCMELSSEGELEGSVWERIIWQDDRLVWEPKNYSGISVLR--VHNSKLWKPDIVLYSKKSGIYLDPDYNILIYSTGKILSVPDKRIRIHCTNANFTSPWALQECKLKYGSWTYHQGQL---KLSIRNGTSLVSEFNEYCPLKVLDMTNELTIKKYDCCEEDYASIEAKLRFQRQFLV 229
BLAST of EMLSAG00000003222 vs. nr
Match: gi|225711636|gb|ACO11664.1| (Acetylcholine receptor subunit alpha-like 1 precursor [Caligus rogercresseyi]) HSP 1 Score: 76.6406 bits (187), Expect = 3.423e-13 Identity = 54/206 (26.21%), Postives = 94/206 (45.63%), Query Frame = 0
Query: 48 NTLLSTYN-KVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNEV---LVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGE-TDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWLV 248
+L YN V P P++ G + S+ P C L+ +G L+G +W W D RL W + + + +P + P I +K F + A +Y G V +K C G + W + C TY WT++ ++L++ TD+ +++ Y CP++ ++ +L + Y Y +I+Y LLQR +L+
Sbjct: 25 KSLFENYNPSVHPGTPQSIGPVGF--SIVPQCMSLSLDGQLDGHIWARISWMDERLMWNPEDHDGIKLLRIPIEKLWSPDITLYTKRNENDFYGKFNAIVYNTGKVLYVPDTHVKADCSGLNTTDIWAVNECKLTYGSWTYDHQLMELKESKRITDADEITAY----CPLQTVDVLHELKIKKYSCCEEPYSHIEYKILLQRRYLM 224
BLAST of EMLSAG00000003222 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1347_size46067-snap-gene-0.13 (protein:Tk02972 transcript:maker-scaffold1347_size46067-snap-gene-0.13-mRNA-1 annotation:"neuronal acetylcholine receptor subunit alpha-7-like") HSP 1 Score: 73.559 bits (179), Expect = 2.509e-15 Identity = 49/172 (28.49%), Postives = 75/172 (43.60%), Query Frame = 0
Query: 50 LLSTYNKVT-PPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWI--DDTSN--EVLVPKRLIHIPGILPISK-------YVREXFDHRELATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNEN 209
L Y+ T PP GV + LT + +L ++G L G+VW ++W D RL W +D+S + V I P I +K Y HR A + G V + V I+ C+ W+ NC+ + WTH+ ID+ G+ + +DLS Y +
Sbjct: 30 LFVDYDPTTQPPSSSTDGVTRVQFGLTGVWLDLDKQGILRGSVWQRFRWNDERLAWTVNNDSSQPKSIYVDPSQIWTPDITLFNKFNSDSPMYPERINGHRANAVVTAKGDVIMVPSVGIQAICEDANLVYVWEEQNCTLRFGSWTHDGFEIDMDLFGKANKMDLSYYQRSS 201
BLAST of EMLSAG00000003222 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1347_size46067-snap-gene-0.10 (protein:Tk02969 transcript:maker-scaffold1347_size46067-snap-gene-0.10-mRNA-1 annotation:"neuronal acetylcholine receptor subunit alpha-3 precursor") HSP 1 Score: 70.4774 bits (171), Expect = 1.376e-14 Identity = 51/206 (24.76%), Postives = 89/206 (43.20%), Query Frame = 0
Query: 56 KVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKW----IDDTSNEVLVPKRLIHIPGILPISKYVREXFDHREL-------ATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETD---SVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWL 247
+V PP + + + P+ ++ +G L+G +WY + W D RL W + ++ + V L+ IP I+P + H L A IY G + + V I+ CD D+ W CS + WT + +DL+ D +D++ Y ++ P + T+L ++YY Y YI + QR ++
Sbjct: 43 EVKPPGINGSTSVQVKFTFAPVRLSMSVDGILKGQIWYRFVWNDPRLGWNPEDMGGFADPIRVDSSLLWIPDIVPYGRLDEFQSMHNSLTPGAWSNALIYPTGEILVVPSVHIEYQCDT-NLDDIWAEQQCSLKFGSWTQDGYMLDLQIYENDDNSTGLDMTDY-QKSSPFMITESATELVTKYYPCCEEPYPYILFNITGQRRFI 246
BLAST of EMLSAG00000003222 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1347_size46067-snap-gene-0.11 (protein:Tk02970 transcript:maker-scaffold1347_size46067-snap-gene-0.11-mRNA-1 annotation:"neuronal acetylcholine receptor subunit alpha-3 precursor") HSP 1 Score: 65.4698 bits (158), Expect = 1.040e-12 Identity = 60/244 (24.59%), Postives = 101/244 (41.39%), Query Frame = 0
Query: 20 HLLNLLLVLLLNKIYSIHTSFMAQHPAINTLLSTYNKVTPPYPEN-KGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDSRLKWIDDTSNEVLVPKRLIHIPGIL---PISKYVREXFDHREL------------ATIYRNGTVFLNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSVDLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWL 247
L L+ + L + I + A LLS Y++ T P + GV + L + EL + G L G+VW KW D RL W + +N +P+ P + IS + R FD + + NG V L V I+ C+ + W NC+ Y WT++ +D+ D VDLS Y ++ P+++ + + + Y Y+ ++ +QR ++
Sbjct: 2 QALLLVSIALASGIQAFPDRASATTKLREGLLSNYDEATQPSSTSLNGVTQVDFGLNALWLELDDRGILCGSVWLKMKWNDERLSW--NANNVTGIPENFHVAPSQIWTPDISLFNR--FDSGAPMFPEKTKGFSGNSIVMANGDVILIPSVGIQAICEDVNLADRWGEQNCTLKYGSWTYSGYKLDMGMYDGHDQVDLSMY-QKSSPLEIKSSKVVRREKTYDCCPEPYISMEIHLTVQRRFV 240 The following BLAST results are available for this feature:
BLAST of EMLSAG00000003222 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000003222 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000003222 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 6
BLAST of EMLSAG00000003222 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 2
BLAST of EMLSAG00000003222 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000003222 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 22
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BLAST of EMLSAG00000003222 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 3
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s177:50291..51169- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000003222-685988 ID=EMLSAG00000003222-685988|Name=EMLSAG00000003222|organism=Lepeophtheirus salmonis|type=gene|length=879bp|location=Sequence derived from alignment at LSalAtl2s177:50291..51169- (Lepeophtheirus salmonis)back to top Add to Basket
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