EMLSAG00000003274, EMLSAG00000003274-686040 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003274
Unique NameEMLSAG00000003274-686040
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000003274 vs. C. finmarchicus
Match: gi|592777079|gb|GAXK01177489.1| (TSA: Calanus finmarchicus comp461590_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 31.187 bits (69), Expect = 1.900e+0
Identity = 17/33 (51.52%), Postives = 20/33 (60.61%), Query Frame = 0 
Query:   44 GDKIKLRCPILG-PSPFKITWRKTTVCRAFNAW 75
            GD IKLRCPI G P+P  ++W K      F AW
Sbjct: 1309 GDDIKLRCPIHGYPTPM-VSWEKDQDTITF-AW 1401
[Close]
BLAST of EMLSAG00000003274 vs. C. finmarchicus
Match: gi|592815719|gb|GAXK01138849.1| (TSA: Calanus finmarchicus comp1078571_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.6462 bits (65), Expect = 3.450e+0
Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 0 
Query:   39 IEYSNGDKIKLRCPILGPSPFKITWRK 65
            +E S GD + + C   G  P KITW+K
Sbjct:  224 LEVSAGDDLTILCEATGNPPPKITWKK 304
[Close]
BLAST of EMLSAG00000003274 vs. C. finmarchicus
Match: gi|592912035|gb|GAXK01046340.1| (TSA: Calanus finmarchicus comp581162_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 4.219e+0
Identity = 13/27 (48.15%), Postives = 16/27 (59.26%), Query Frame = 0 
Query:   39 IEYSNGDKIKLRCPILGPSPFKITWRK 65
            +E S GD + + C   G  P KITWRK
Sbjct: 1067 LEVSAGDDLTIICEATGNPPPKITWRK 1147
[Close]
BLAST of EMLSAG00000003274 vs. C. finmarchicus
Match: gi|592912037|gb|GAXK01046338.1| (TSA: Calanus finmarchicus comp581162_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 4.402e+0
Identity = 13/27 (48.15%), Postives = 16/27 (59.26%), Query Frame = 0 
Query:   39 IEYSNGDKIKLRCPILGPSPFKITWRK 65
            +E S GD + + C   G  P KITWRK
Sbjct: 1836 LEVSAGDDLTIICEATGNPPPKITWRK 1916
[Close]
BLAST of EMLSAG00000003274 vs. C. finmarchicus
Match: gi|592912036|gb|GAXK01046339.1| (TSA: Calanus finmarchicus comp581162_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 4.406e+0
Identity = 13/27 (48.15%), Postives = 16/27 (59.26%), Query Frame = 0 
Query:   39 IEYSNGDKIKLRCPILGPSPFKITWRK 65
            +E S GD + + C   G  P KITWRK
Sbjct: 1159 LEVSAGDDLTIICEATGNPPPKITWRK 1239
[Close]
BLAST of EMLSAG00000003274 vs. C. finmarchicus
Match: gi|592893425|gb|GAXK01064950.1| (TSA: Calanus finmarchicus comp988159_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 4.501e+0
Identity = 25/100 (25.00%), Postives = 44/100 (44.00%), Query Frame = 0 
Query:   34 AITNRIEYSNG--DKIKLRCP-ILGPSPFKITWRKTTVCRAFNAWEVEGKVCRKAHNMKSDRNRGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATR 130
            ++ N+++++    DK  +RCP +L P P    W+   VC     W++        H +   RN+  S+ LV  +            D++HI+  S   TR
Sbjct: 2238 SLPNQLQFTLC*CDKEDIRCPSLLAPCPTTAPWQPMHVCWEKVRWQIN-------HLLSFRRNQIPSEYLVVIS------------DREHIVRRSPANTR 2480
[Close]
BLAST of EMLSAG00000003274 vs. C. finmarchicus
Match: gi|592833411|gb|GAXK01124133.1| (TSA: Calanus finmarchicus comp257116_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 6.832e+0
Identity = 14/43 (32.56%), Postives = 20/43 (46.51%), Query Frame = 0 
Query:   23 DTKLPKIIEKLAITNRIEYSNGDKIKLRCPILGPSPFKITWRK 65
            D  +P  I+ L  +  +    GD + L C   G    KITWR+
Sbjct:  120 DVNVPPDIDYLKTSKDVVVQEGDNVTLVCKASGHPRPKITWRR 248
[Close]
BLAST of EMLSAG00000003274 vs. C. finmarchicus
Match: gi|592833412|gb|GAXK01124132.1| (TSA: Calanus finmarchicus comp257116_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 7.572e+0
Identity = 14/43 (32.56%), Postives = 20/43 (46.51%), Query Frame = 0 
Query:   23 DTKLPKIIEKLAITNRIEYSNGDKIKLRCPILGPSPFKITWRK 65
            D  +P  I+ L  +  +    GD + L C   G    KITWR+
Sbjct:  136 DVNVPPDIDYLKTSKDVVVQEGDNVTLVCKASGHPRPKITWRR 264
[Close]
BLAST of EMLSAG00000003274 vs. L. salmonis peptides
Match: EMLSAP00000003274 (pep:novel supercontig:LSalAtl2s:LSalAtl2s179:129069:132730:-1 gene:EMLSAG00000003274 transcript:EMLSAT00000003274 description:"snap-LSalAtl2s179-processed-gene-1.24")

HSP 1 Score: 334.724 bits (857), Expect = 1.796e-118
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 
Query:    1 MNQIYFIIITLYTLLIPLIDSNDTKLPKIIEKLAITNRIEYSNGDKIKLRCPILGPSPFKITWRKTTVCRAFNAWEVEGKVCRKAHNMKSDRNRGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVDRS 162
            MNQIYFIIITLYTLLIPLIDSNDTKLPKIIEKLAITNRIEYSNGDKIKLRCPILGPSPFKITWRKTTVCRAFNAWEVEGKVCRKAHNMKSDRNRGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVDRS
Sbjct:    1 MNQIYFIIITLYTLLIPLIDSNDTKLPKIIEKLAITNRIEYSNGDKIKLRCPILGPSPFKITWRKTTVCRAFNAWEVEGKVCRKAHNMKSDRNRGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVDRS 162
[Close]
BLAST of EMLSAG00000003274 vs. L. salmonis peptides
Match: EMLSAP00000008303 (pep:novel supercontig:LSalAtl2s:LSalAtl2s503:210067:213886:1 gene:EMLSAG00000008303 transcript:EMLSAT00000008303 description:"snap_masked-LSalAtl2s503-processed-gene-2.8")

HSP 1 Score: 152.14 bits (383), Expect = 1.546e-45
Identity = 79/129 (61.24%), Postives = 90/129 (69.77%), Query Frame = 0 
Query:   61 ITWRKTTVCRAFNAWEVEGKVCRKAHNMKSDR---------------------------NRGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVDRS 162
            + +  TTV R FNAWE++GK C KAH+M+SDR                           N GVSKQLVSKAV++DLGYRSYRM KQHILTASMKATRL NG RLLNDL+SHGGRIIFFSD+KNWT +RS
Sbjct:   12 LNYPNTTVYRIFNAWEIKGKFCCKAHSMRSDRIRTFRFLEGLRKSIKASPGTSLSRLVKNXGVSKQLVSKAVNEDLGYRSYRMVKQHILTASMKATRLANGMRLLNDLESHGGRIIFFSDEKNWTFNRS 140
[Close]
BLAST of EMLSAG00000003274 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold3744_size7625-processed-gene-0.1 (protein:Tk07316 transcript:snap_masked-scaffold3744_size7625-processed-gene-0.1-mRNA-1 annotation:"hypothetical protein EAG_00300")

HSP 1 Score: 88.5817 bits (218), Expect = 1.035e-22
Identity = 41/71 (57.75%), Postives = 55/71 (77.46%), Query Frame = 0 
Query:   92 RNRGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVDRS 162
            +NR VS   +S+A++ DL   SY++  +HILT +MK  R+ NG ++LNDLKSHG RIIFFSD+KNWTVDR+
Sbjct:    6 KNRNVSTSTISRAINNDLDMTSYKLYTRHILTEAMKIRRVENGSKILNDLKSHGRRIIFFSDEKNWTVDRT 76
[Close]
BLAST of EMLSAG00000003274 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold253_size237113-processed-gene-1.22 (protein:Tk00295 transcript:snap_masked-scaffold253_size237113-processed-gene-1.22-mRNA-1 annotation:"cuticle protein")

HSP 1 Score: 62.3882 bits (150), Expect = 2.069e-12
Identity = 28/69 (40.58%), Postives = 47/69 (68.12%), Query Frame = 0 
Query:   92 RNRGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVD 160
            R R V++  +SKA+  DLG + + +  +H+LTA+ +  R+ + +R+L   KS GG + FFSD+K++TVD
Sbjct:  138 RRRNVARSTISKAIKDDLGMKGFALRVRHLLTATQRENRVLHCRRILASWKSTGGHLRFFSDEKSFTVD 206
[Close]
BLAST of EMLSAG00000003274 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold534_size144770-processed-gene-0.19 (protein:Tk11149 transcript:snap_masked-scaffold534_size144770-processed-gene-0.19-mRNA-1 annotation:"transposable element tcb2 transposase")

HSP 1 Score: 59.3066 bits (142), Expect = 2.020e-11
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0 
Query:   94 RGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVD 160
            R V +  V +AV +DLG +SY   ++H+LTA MKATRL   K+L    K + G I  FSD+ N+TVD
Sbjct:   88 RSVGRSTVMRAVKEDLGLKSYIRGRRHLLTAKMKATRLERSKKLRRLCKVNPGIIKLFSDESNFTVD 154
[Close]
BLAST of EMLSAG00000003274 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1081_size63831-snap-gene-0.10 (protein:Tk03225 transcript:maker-scaffold1081_size63831-snap-gene-0.10-mRNA-1 annotation:"frizzled- partial")

HSP 1 Score: 59.3066 bits (142), Expect = 4.023e-11
Identity = 38/119 (31.93%), Postives = 60/119 (50.42%), Query Frame = 0 
Query:   65 KTTVCRAFNAWEVEGKVCRKAHNMKSDRN----------RGVS-------------KQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVD 160
            ++TV    NA++ +GKV    H  + DR           R V              + +   A+  DLG +S+ +  +H+L+ + K  RL + +R+L  LKS GG + FFSD+KN+TVD
Sbjct:  567 RSTVYNIINAFKDKGKVSSNEHKPRRDRKMTPMLLAGLKRSVKANSQIPMAELARKRNVARSAIKDDLGVKSFPLRVRHLLSTTQKEKRLLHCRRILASLKSTGGHLRFFSDEKNFTVD 685
[Close]
BLAST of EMLSAG00000003274 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold58_size443543-snap-gene-0.8 (protein:Tk00687 transcript:maker-scaffold58_size443543-snap-gene-0.8-mRNA-1 annotation:"hypothetical protein BRAFLDRAFT_61918")

HSP 1 Score: 57.7658 bits (138), Expect = 1.429e-10
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0 
Query:  101 VSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVDR 161
            + KAV  DLG +S+    + +LTA+MK  RL   K++L DLK +G RI  FSDKK +TVD+
Sbjct:  738 IRKAVHDDLGLKSFVRVPRQLLTATMKERRLERWKKILVDLKHNGSRIKIFSDKKIFTVDQ 798
[Close]
BLAST of EMLSAG00000003274 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold348_size200312-snap-gene-0.28 (protein:Tk10904 transcript:maker-scaffold348_size200312-snap-gene-0.28-mRNA-1 annotation:"glycoprotein-n-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform x3")

HSP 1 Score: 55.4546 bits (132), Expect = 6.600e-10
Identity = 28/67 (41.79%), Postives = 44/67 (65.67%), Query Frame = 0 
Query:   94 RGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVD 160
            RG+S++ ++KA+ +DLG  SY   ++H+LT  MKA RL   ++L    KS+ G +  FSD+  +TVD
Sbjct:  521 RGLSRKTMAKAIKEDLGLTSYVRGRRHLLTEKMKAVRLERSRKLRRICKSNPGVVRLFSDESIFTVD 587
[Close]
BLAST of EMLSAG00000003274 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold572_size133628-snap-gene-0.11 (protein:Tk01141 transcript:maker-scaffold572_size133628-snap-gene-0.11-mRNA-1 annotation:"similar to H28G03.4")

HSP 1 Score: 55.0694 bits (131), Expect = 8.638e-10
Identity = 28/67 (41.79%), Postives = 44/67 (65.67%), Query Frame = 0 
Query:   94 RGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVD 160
            RG+S++ ++KA+ +DLG  SY   ++H+LT  MKA RL   ++L    KS+ G +  FSD+  +TVD
Sbjct:  146 RGLSRKTMAKAIKEDLGLTSYVRGRRHLLTEKMKAVRLERSRKLRRICKSNPGVVRLFSDESIFTVD 212
[Close]
BLAST of EMLSAG00000003274 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1099_size62903-processed-gene-0.6 (protein:Tk01128 transcript:snap_masked-scaffold1099_size62903-processed-gene-0.6-mRNA-1 annotation:"kinesin-like protein kif3a isoform x2")

HSP 1 Score: 52.373 bits (124), Expect = 9.342e-9
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 0 
Query:   92 RNRGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVD 160
            +N  VSK  VS+AV K  G +S R+ ++ +L+   +  RL     LLN LK H  R+IF+SD+K +TVD
Sbjct:   77 KNTNVSKATVSRAVKK-AGGKSLRLVERPLLSQRQQDLRLERCGTLLNSLKHHKRRVIFYSDEKTFTVD 144
[Close]
BLAST of EMLSAG00000003274 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold61_size441589-snap-gene-2.11 (protein:Tk06308 transcript:maker-scaffold61_size441589-snap-gene-2.11-mRNA-1 annotation:"hypothetical protein Y032_0001g415")

HSP 1 Score: 51.2174 bits (121), Expect = 2.139e-8
Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 0 
Query:   83 RKAHNMKSDRNRGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVD 160
            R    +  D N  VS++ + + VS DLG RS   ++   LTA+ +A R+    ++LN +KS+  + I FSD+KNW VD
Sbjct:  384 RSMRQLAKDAN--VSERTMRRVVSNDLGLRSRAKERCQPLTATNRARRVECCTKILNWMKSNPRKNIVFSDEKNWLVD 459

HSP 2 Score: 50.8322 bits (120), Expect = 3.043e-8
Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0 
Query:   92 RNRGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVD 160
            ++  VS++ + + VS DLG RS   ++   LTA+ +A R+    ++LN +KS+  + I FSD+KNW VD
Sbjct:  510 KDANVSERTMRRVVSNDLGLRSRAKERCQPLTATNRARRVECCTKILNWMKSNPRKNIVFSDEKNWLVD 578
[Close]
BLAST of EMLSAG00000003274 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold129_size324999-snap-gene-1.23 (protein:Tk10956 transcript:maker-scaffold129_size324999-snap-gene-1.23-mRNA-1 annotation:"cytochrome p450 cyp3a78")

HSP 1 Score: 49.2914 bits (116), Expect = 1.035e-7
Identity = 31/78 (39.74%), Postives = 43/78 (55.13%), Query Frame = 0 
Query:   84 KAHNM-KSDRNRGVSKQLVSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIFFSDKKNWTVD 160
            KA NM K  R+  V +  V +   +DLG RS  + K   LT   +  RL   K LLN +K   G+++ FSD+K +TVD
Sbjct:  497 KAKNMRKMARDVNVHESSVRRTFKRDLGLRSRAVTKVQGLTTVQRQKRLARCKILLNKIKKGDGKVLIFSDEKIFTVD 574
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003274 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003274 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 8
Match NameE-valueIdentityDescription
gi|592777079|gb|GAXK01177489.1|1.900e+051.52TSA: Calanus finmarchicus comp461590_c1_seq1 trans... [more]
gi|592815719|gb|GAXK01138849.1|3.450e+044.44TSA: Calanus finmarchicus comp1078571_c0_seq1 tran... [more]
gi|592912035|gb|GAXK01046340.1|4.219e+048.15TSA: Calanus finmarchicus comp581162_c0_seq3 trans... [more]
gi|592912037|gb|GAXK01046338.1|4.402e+048.15TSA: Calanus finmarchicus comp581162_c0_seq1 trans... [more]
gi|592912036|gb|GAXK01046339.1|4.406e+048.15TSA: Calanus finmarchicus comp581162_c0_seq2 trans... [more]
gi|592893425|gb|GAXK01064950.1|4.501e+025.00TSA: Calanus finmarchicus comp988159_c0_seq1 trans... [more]
gi|592833411|gb|GAXK01124133.1|6.832e+032.56TSA: Calanus finmarchicus comp257116_c0_seq2 trans... [more]
gi|592833412|gb|GAXK01124132.1|7.572e+032.56TSA: Calanus finmarchicus comp257116_c0_seq1 trans... [more]
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BLAST of EMLSAG00000003274 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000032741.796e-118100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s179:12906... [more]
EMLSAP000000083031.546e-4561.24pep:novel supercontig:LSalAtl2s:LSalAtl2s503:21006... [more]
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BLAST of EMLSAG00000003274 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003274 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003274 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003274 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 13
Match NameE-valueIdentityDescription
snap_masked-scaffold3744_size7625-processed-gene-0.11.035e-2257.75protein:Tk07316 transcript:snap_masked-scaffold374... [more]
snap_masked-scaffold253_size237113-processed-gene-1.222.069e-1240.58protein:Tk00295 transcript:snap_masked-scaffold253... [more]
snap_masked-scaffold534_size144770-processed-gene-0.192.020e-1147.76protein:Tk11149 transcript:snap_masked-scaffold534... [more]
maker-scaffold1081_size63831-snap-gene-0.104.023e-1131.93protein:Tk03225 transcript:maker-scaffold1081_size... [more]
maker-scaffold58_size443543-snap-gene-0.81.429e-1049.18protein:Tk00687 transcript:maker-scaffold58_size44... [more]
maker-scaffold348_size200312-snap-gene-0.286.600e-1041.79protein:Tk10904 transcript:maker-scaffold348_size2... [more]
maker-scaffold572_size133628-snap-gene-0.118.638e-1041.79protein:Tk01141 transcript:maker-scaffold572_size1... [more]
snap_masked-scaffold1099_size62903-processed-gene-0.69.342e-943.48protein:Tk01128 transcript:snap_masked-scaffold109... [more]
maker-scaffold61_size441589-snap-gene-2.112.139e-838.46protein:Tk06308 transcript:maker-scaffold61_size44... [more]
maker-scaffold129_size324999-snap-gene-1.231.035e-739.74protein:Tk10956 transcript:maker-scaffold129_size3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s179supercontigLSalAtl2s179:129069..132730 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap-LSalAtl2s179-processed-gene-1.24
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003274 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003274EMLSAT00000003274-699121Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s179:129069..132730-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003274-686040 ID=EMLSAG00000003274-686040|Name=EMLSAG00000003274|organism=Lepeophtheirus salmonis|type=gene|length=3662bp|location=Sequence derived from alignment at LSalAtl2s179:129069..132730- (Lepeophtheirus salmonis)
ATGAATCAAATTTATTTCATCATTATCACACTTTATACTCTTCTCATTCC
ATTAATAGGTAAGATGATATAGAATTATGTTGGTGGTGAGTTAACACAAA
AACAATCAGGAACAAAAATCCAGACAACGAAAAATGTCTTCTTTATATTT
TTGTAGCATACAACACATTTATTCACAGACATAAAGGGGTCAATTATAAA
CTTTGTATTCAATTTTCTGTTATAAATAAAAATTGTTAAGAATATTCACT
ATAGTTTAAAGACTTAAGTGTATTTTTGAGCCTTAATTAGACTGGATATG
GCATTTCAAATAGAAACTCTCAATTTATCATTTAATTTATTCATTTTCGT
TGTGTCAACGACAGGCTTTGTATTCAATTTTCTGGTCCAATTTGAGATAC
CTTTAAACTTTAGCAATAGTTATAAGTCTTTTTTGCTTTTACCATTTATA
ATTTAGCGCCGAAATTACCTTTCTGCGCGAAATCGTCAATTTATCATTCT
TTCATTGTGTCAAATTAAATAGTTTATGTACATATTTTGGGAAATTTTAG
GCTTTGTATTCAAATTTCGGTTATGAGTCTATATGCACACAGTATTTAGC
TATAGTTTAAAGCCTTCAATGAATTTTTAAGTCTTAATTTATCCCCGATA
TCATCTTTCAAATAAAAATATTTATTGGACATAATTCGAATAATTATAGG
CTTTGTATTTAAAGTTCTTCTAAGTGTTAACATATCTAAGAGTTTAAACT
ATAGTTTGAAGCCTTCATTTCATTTATTAGACTAAATTTTATCCTGACCT
AGCCTTTTTCAATATTAATTCTACCAATTTTTAATTATTTCACTGTAAGG
ATGCATTTTTTCCTAGATTTAAACTCTTTTGTGGCACCTCTTGAAGATTC
ATCATTAAATTTTGTTTATAGAAATGGACCATAATCCGTTGAATAGAACA
AATATAATCTCCCCTCAATTTTAAGACTAATCATTCTTGGTTGCTTTTGT
GTAGACGGGCCACTAATATACTTTTGAAATTAAGTTTACTTAGTTTGTTT
TGTTGATATCAAAATTTTCAGACTCAAATGATACAAAATTACCTAAAATC
ATCGAAAAACTTGCAATCACAAATCGAATCGAGTACTCAAATGGCGATAA
AATAAAACTCCGATGTCCCATTCTTGGACCAAGCCCTTTTAAAATCACTT
GGAGAAAGGTAAGGTCTAAAAATAGGCAGCTTATTCATTGTTGAAAATAA
TTATGTATGACTATGTTTGTCGTATATGATTCGAATTCCTTATTATTTTA
ATGACGCAGTCTTACTTATCAATGAATAATAATTCACAACAACTATTTCA
AAGGGAATTAGTTATTGTTAGTAATGTCATAACAATCAAAATGATAAACA
ATTTGATCTATTTGATGATTAATTCAGTCATATCTGATTCAATTCAATCC
AATAATTGAAATTATAAGATTGTATATCCGGTAGCTAAATAATCTATTTA
TAGTGAACGCAATAATTTCAATTCCGCTTTAGAGGATTTTAGCACTATTA
CTGGTAAATTGATTTACCTTTAATTGGCACTATTAGAAAGATCAAAGTCG
GCCACTTTTAGAAATGGTTCATTTCTTTAAAATCAACGGAAAACTAAACA
TATGTTTAACTTAAAACTACACAAAGCGTTTTCCTTTGGCGGGTAGCACT
TTCCCAATAATCAGAATCCATGTCCTATTGATATTGTTGGTGTGACTCCT
TGTTTGATTATCTTGCCCACTCATCTTACACTTGGTCTTGCAGGCAATGG
ACTTGAGAGCCCTAATGAGCTTCTGAATGTTCTTCCCGTATTACCCAATA
GGCTTACAATCTGGAATTGACTTTTCCAAGCCTACCGTTGGTCCACACTT
TGATCATATTGCTGTTGGGGATCAGGGGTGCAATACTAAAAATAATAATA
AAAAATTAGTTAAATGATTTCGACGTCCATAATTTGAAAGCTAATTATTT
ACTCCTTAAGTTAATTATACTTGCAAAAGATTGGTTTTTTCATAACTAGA
GTACAACCGCAGAGCACATACAAAATTTGATCTGTCCTGGCTCAGAAGTT
GAATTGTAGTACGGCAAAAAAATAAAATATATATGTAATATATTTGGGCT
AATTGTTTATGTGCTAGATTCCATGATTCTATATTCAATACTGTTAGTGC
AAATATATATTGTTGTGGTATCGGAATTAATGTGGATTTTGTATATAGGG
CCGATTAGATCAATCATAGTCCCATTAAAACTTACCAAAAAACTTGACCC
ATTAACGGCGATAAATATTAAATAAGTTTTTAACAACAAATTACAAATAA
TCAATTTTTTAGGAAAACAAAATTCAAAAATCTATTCATAAAAATGAAAT
TTCAAATAACACAAAAACTAAACTTCCAATATGATATTTTTTTGAAATAG
GAAATCTTAAAAAAAAATTTCGCATAGTTTTGAGTAAAATTTATTCATCC
TAACCCAAAAAATTTCTAGTAATAATAAAAAAAACCTTAACTTATGGGGG
GGGGGGTTACAGGGGNCTCCTCTGGTATCTTACATGTTTGATTCAAAGCT
TACAGCCCTTATTCAACGTTGATGACTTGTTAACGGCGTAGACGGTAGTC
CTGTAGACGCCCAATTGTTTGGAGTGCGCGAATGGAAATTTTCCGATCAC
GTTTATGTGTCATTTTCTCGACTTGTACCAAAGGTAGAGAGCTCAAGTTT
GTTTTGTTTTGTAACTAATTGTTTATGCTTCAATATAAAGGAATATGAAT
TAGTTTCAATCACTCAACCTTAACTAATTATTGATTTTGTTTGTGTGAAT
ATATCAATGGACTGCCCGGTATACTGATTAACATTTTTATTGTCAATTAT
TACTTATATCTACCCCAACTTCCCCCATTGACAGTATTAGTAAATACGTT
TAATTACCCACATAAAAATTAATATAATAGCTAAGGTACTGTTAACTATT
CTCTGCCATTGGTGTACAAAGTTCCATATTGTTTTAAACTCTGCAAATCA
GAAAAATATGTCTCAATATCAGTTTAAAAAGCTTTGTAATATATCGAATA
CGGTTTTTTTGTCCTTACTCACCAATTACAGGGTGTCCACGATAAATTGT
AACTACTTTAAACTTCATTCAGATCCATAATGTGGATATTTGGGGTTAAA
TCAACCTAATATAAAAGGTTGCGTGAACAATAAACTATAACTTCCACCAC
AATTGTTTTGACAACAAACAATAGTCATCATGGAATAAGCAAGGAGAGKC
CCCATCCTCGAATTGGCTCGCATGGAACACAAGCCTCTGCTATCTACAAG
CTTCTTAATTACCCTAAGACCACGGTGTGCCGGGCGTTCAATGCCTGGGA
GGTTGAGGGGAAGGTATGTCGCAAGGCCCACAACATGAAAAGTGACCGAA
ACCGTGGAGTGAGCAAGCAGCTGGTCTCCAAGGCTGTGAGTAAGGACCTC
GGGTACAGGTCATACCGAATGGACAAACAACACATCCTCACGGCATCCAT
GAAGGCCACCAGGCTCACCAACGGTAAGCGTCTCCTCAATGACCTGAAGA
GCCATGGAGGAAGAATCATTTTCTTCTCCGACAAGAAGAACTGGACTGTC
GACAGAAGCTAA
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