EMLSAG00000003863, EMLSAG00000003863-686629 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000003863
Unique Name	EMLSAG00000003863-686629
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of EMLSAG00000003863 vs. GO
Match: - (symbol:mRpL27 "mitochondrial ribosomal protein L27" species:7227 "Drosophila melanogaster" [GO:0003735 "structural constituent of ribosome" evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412 "translation" evidence=IEA] [GO:0032543 "mitochondrial translation" evidence=IC] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 EMBL:AE014134 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 KO:K02899 PANTHER:PTHR15893 GeneTree:ENSGT00390000014660 CTD:51264 OMA:HVVPAKP OrthoDB:EOG7R834K RefSeq:NP_001260028.1 RefSeq:NP_787971.1 UniGene:Dm.26576 SMR:Q86BM8 IntAct:Q86BM8 MINT:MINT-800309 EnsemblMetazoa:FBtr0077451 GeneID:318825 KEGG:dme:Dmel_CG33002 UCSC:CG33002-RA FlyBase:FBgn0053002 InParanoid:Q86BM8 GenomeRNAi:318825 NextBio:846234 PRO:PR:Q86BM8 Bgee:Q86BM8 Uniprot:Q86BM8)

HSP 1 Score: 81.2629 bits (199), Expect = 2.880e-18
Identity = 42/125 (33.60%), Postives = 74/125 (59.20%), Query Frame = 0

Query:   41 LLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            L+  VR   K++ GST+N+ G    K RG +V DG  V  G+ L  Q+     PGLN  FG   ++ A  HG+V  T E  + ++++ +++QR ++   +G+N+++   +V+P+ QHQ F+L++ 
Sbjct:   15 LMTTVRNASKKTGGSTRNKKGHARPKHRGWRVQDGHHVSEGTILATQLTTRFHPGLNVGFGRNGTLFAMEHGKVYVTCEAIDPNWDH-TWIQRNYA-GRQGQNIYKKFFNVVPENQHQRFRLVEE 137

[Close]

BLAST of EMLSAG00000003863 vs. GO
Match: - (symbol:Mrpl27 "mitochondrial ribosomal protein L27" species:10116 "Rattus norvegicus" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0044822 "poly(A) RNA binding" evidence=ISO] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 RGD:1309090 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH473948 KO:K02899 PANTHER:PTHR15893 GeneTree:ENSGT00390000014660 CTD:51264 OMA:HVVPAKP OrthoDB:EOG7R834K TreeFam:TF323523 EMBL:AABR06065320 RefSeq:NP_001099301.1 UniGene:Rn.18445 Ensembl:ENSRNOT00000004947 GeneID:287635 KEGG:rno:287635 UCSC:RGD:1309090 NextBio:35570123 Uniprot:D3ZTW8)

HSP 1 Score: 53.1434 bits (126), Expect = 2.791e-8
Identity = 44/147 (29.93%), Postives = 63/147 (42.86%), Query Frame = 0

Query:   18 LASGAGTTVLLDGGVSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLD 164
            +AS A    L     +    T+     VR   K++ GS+KN  G   GK  G K  +G  V  G+ L  Q      PG +   G    + A   G V +T E    + +N   V    S   KG  +++T VHV+P +    FKL+D
Sbjct:    1 MASAAAALTLRTRAAALLSPTAPTALAVRSASKKTGGSSKNLGGKSRGKHYGIKKMEGHYVHAGNILGTQRQFRWHPGAHVGLGKNKCLYALEEGIVRYTKEVYVPNPKNSEAVNLVTSLP-KGAVLYKTFVHVVPAKPEGTFKLVD 146

[Close]

BLAST of EMLSAG00000003863 vs. GO
Match: - (symbol:MRPL27 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR15893 GeneTree:ENSGT00390000014660 OMA:HVVPAKP OrthoDB:EOG7R834K TreeFam:TF323523 EMBL:AAEX03006536 Ensembl:ENSCAFT00000026969 Uniprot:E2QYN6)

HSP 1 Score: 51.9878 bits (123), Expect = 7.760e-8
Identity = 37/120 (30.83%), Postives = 56/120 (46.67%), Query Frame = 0

Query:   44 GVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLL 163
             VR   K++ GS+KN  G   GK+ G +  +G  V  G+ L  Q H    PG +   G +  + A   G V +T E       N   V+   +   KG  +++T VHV+P +    FKL+
Sbjct:   28 AVRYASKKTGGSSKNLGGKSPGKRFGLRKMEGHYVHAGNILATQRHFRWHPGAHVGLGKKKHLYALEEGVVHYTKEVYVPSPSNTEAVE-LVTRLPKGAVLYKTFVHVVPVKPEGTFKLV 146

[Close]

BLAST of EMLSAG00000003863 vs. GO
Match: - (symbol:Mrpl27 "mitochondrial ribosomal protein L27" species:10090 "Mus musculus" [GO:0003735 "structural constituent of ribosome" evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0044822 "poly(A) RNA binding" evidence=ISO] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 MGI:MGI:2137224 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893 GeneTree:ENSGT00390000014660 CTD:51264 HOVERGEN:HBG018255 OMA:HVVPAKP OrthoDB:EOG7R834K TreeFam:TF323523 EMBL:AB049648 EMBL:BC030074 RefSeq:NP_444391.1 UniGene:Mm.34951 ProteinModelPortal:Q99N92 SMR:Q99N92 IntAct:Q99N92 MINT:MINT-1844243 PhosphoSite:Q99N92 PaxDb:Q99N92 PRIDE:Q99N92 Ensembl:ENSMUST00000025278 GeneID:94064 KEGG:mmu:94064 UCSC:uc007kzg.1 InParanoid:Q99N92 NextBio:352041 PRO:PR:Q99N92 Bgee:Q99N92 CleanEx:MM_MRPL27 Genevestigator:Q99N92 Uniprot:Q99N92)

HSP 1 Score: 51.9878 bits (123), Expect = 8.053e-8
Identity = 47/164 (28.66%), Postives = 70/164 (42.68%), Query Frame = 0

Query:    1 MMASSLSNSLRPLVSGLLASGAGTTVLLDGGVSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLD 164
            M A++L+   R  V+ LL+  A T +                  VR   K++ GS+KN  G   GK  G K  +G  V  G+ L  Q      PG +   G    + A   G V +T +    + +N   V    S   KG  +++T VHV+P +    FKL+D
Sbjct:    1 MAAAALTLRTRAAVTALLSPTAPTAL-----------------AVRHASKKTGGSSKNLGGKSRGKHYGIKKMEGHYVHAGNILGTQRQFRWHPGAHVGLGRNKCLYALEEGIVRYTKDVYVPNPKNTEAVDLVTSLP-KGAVLYKTFVHVVPAKPEGTFKLVD 146

[Close]

BLAST of EMLSAG00000003863 vs. GO
Match: - (symbol:MRPL27 "39S ribosomal protein L27, mitochondrial" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=NAS] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=NAS] [GO:0006412 "translation" evidence=NAS] [GO:0044822 "poly(A) RNA binding" evidence=IDA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 EMBL:CH471109 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893 CTD:51264 HOVERGEN:HBG018255 OMA:HVVPAKP OrthoDB:EOG7R834K TreeFam:TF323523 EMBL:AB049647 EMBL:AF151084 EMBL:AK315758 EMBL:BC001066 EMBL:BC021986 RefSeq:NP_057588.1 UniGene:Hs.7736 ProteinModelPortal:Q9P0M9 SMR:Q9P0M9 BioGrid:119418 IntAct:Q9P0M9 MINT:MINT-3077897 STRING:9606.ENSP00000225969 PhosphoSite:Q9P0M9 DMDM:20139806 PaxDb:Q9P0M9 PRIDE:Q9P0M9 Ensembl:ENST00000225969 GeneID:51264 KEGG:hsa:51264 UCSC:uc002iqq.3 GeneCards:GC17M048445 HGNC:HGNC:14483 HPA:HPA021416 MIM:611837 neXtProt:NX_Q9P0M9 PharmGKB:PA30957 eggNOG:NOG290823 PhylomeDB:Q9P0M9 ChiTaRS:MRPL27 GenomeRNAi:51264 NextBio:54441 PRO:PR:Q9P0M9 ArrayExpress:Q9P0M9 Bgee:Q9P0M9 CleanEx:HS_MRPL27 Genevestigator:Q9P0M9 Uniprot:Q9P0M9)

HSP 1 Score: 51.9878 bits (123), Expect = 8.381e-8
Identity = 37/120 (30.83%), Postives = 55/120 (45.83%), Query Frame = 0

Query:   44 GVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLL 163
             VR   K+S GS+KN  G   G+++G K  +G  V  G+ +  Q H    PG +   G    + A   G V +T E       N   V    +   KG  +++T VHV+P +    FKL+
Sbjct:   27 AVRYASKKSGGSSKNLGGKSSGRRQGIKKMEGHYVHAGNIIATQRHFRWHPGAHVGVGKNKCLYALEEGIVRYTKEVYVPHPRNTEAVD-LITRLPKGAVLYKTFVHVVPAKPEGTFKLV 145

[Close]

BLAST of EMLSAG00000003863 vs. GO
Match: - (symbol:MRPL27 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 KO:K02899 PANTHER:PTHR15893 GeneTree:ENSGT00390000014660 CTD:51264 OMA:HVVPAKP OrthoDB:EOG7R834K TreeFam:TF323523 PDB:4CE4 PDBsum:4CE4 EMBL:FP102382 EMBL:FP565647 RefSeq:XP_003131628.3 RefSeq:XP_003483058.1 Ensembl:ENSSSCT00000024316 Ensembl:ENSSSCT00000031817 GeneID:100514487 GeneID:100737651 KEGG:ssc:100514487 KEGG:ssc:100737651 Uniprot:F1RT79)

HSP 1 Score: 51.6026 bits (122), Expect = 1.087e-7
Identity = 37/120 (30.83%), Postives = 55/120 (45.83%), Query Frame = 0

Query:   44 GVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLL 163
             VR   K++ GS+KN  G   GK+ G K  +G  V  G+ L  Q H    PG +   G    + A   G V +T E    +  N   V    +   +G  +++T VHV+P +    FKL+
Sbjct:   27 AVRYASKKTGGSSKNLGGKSPGKRFGIKKMEGHYVHAGNILATQRHFRWHPGAHVGLGKNKCLYALEEGVVRYTKEVYVPNPSNSEAVD-LVTRLPQGAVLYKTFVHVVPAKPEGTFKLV 145

[Close]

BLAST of EMLSAG00000003863 vs. GO
Match: - (symbol:MRPL27 "39S ribosomal protein L27, mitochondrial" species:9913 "Bos taurus" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893 PDB:2FTC PDBsum:2FTC GeneTree:ENSGT00390000014660 EMBL:BC108174 RefSeq:NP_001032530.1 UniGene:Bt.3038 ProteinModelPortal:Q32PC3 STRING:9913.ENSBTAP00000028954 PRIDE:Q32PC3 Ensembl:ENSBTAT00000028954 GeneID:510058 KEGG:bta:510058 CTD:51264 HOVERGEN:HBG018255 InParanoid:Q32PC3 OMA:HVVPAKP OrthoDB:EOG7R834K TreeFam:TF323523 EvolutionaryTrace:Q32PC3 NextBio:20869255 Uniprot:Q32PC3)

HSP 1 Score: 50.447 bits (119), Expect = 3.230e-7
Identity = 35/120 (29.17%), Postives = 56/120 (46.67%), Query Frame = 0

Query:   44 GVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLL 163
             VR   K++ GS+KN  G   GK+ G +  +G  V  G+ L  Q H    PG +   G    + A   G V +T E   +   ++S      +   +G  +++T VHV+P +    FKL+
Sbjct:   27 AVRYASKKTGGSSKNLGGKSPGKRFGIRKMEGHYVHAGNILATQRHFRWHPGAHVGLGKNKCLYALEEGVVRYTKE-VYVPSPSNSEAVDLVTRLPEGAVLYKTFVHVVPAKPEGTFKLV 145

[Close]

BLAST of EMLSAG00000003863 vs. GO
Match: - (symbol:mrpl27 "mitochondrial ribosomal protein L27" species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 ZFIN:ZDB-GENE-050522-129 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893 CTD:51264 HOVERGEN:HBG018255 eggNOG:NOG290823 EMBL:BC095759 RefSeq:NP_001018516.1 UniGene:Dr.85554 ProteinModelPortal:Q502C4 STRING:7955.ENSDARP00000043545 GeneID:553709 KEGG:dre:553709 InParanoid:Q502C4 NextBio:20880439 Uniprot:Q502C4)

HSP 1 Score: 47.7506 bits (112), Expect = 3.364e-6
Identity = 36/121 (29.75%), Postives = 57/121 (47.11%), Query Frame = 0

Query:   46 RGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIH--MTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLD 164
            R   K+S GS+KN  G   G++ G K  DG  V  G+ L  Q    M   PG +   G+  ++ A   G V +T E   +     +  +    +  KG  +++T V+V+P +Q   F L+D
Sbjct:   27 RFASKKSGGSSKNLGGKSSGRRYGYKKQDGNFVHAGNILATQRKGLMRWHPGAHVGIGTNKTLYALEDGIVRYTKE-VYVPLPRSAEARENIPQLPKGAVLYKTFVNVVPTKQENKFTLVD 146

[Close]

BLAST of EMLSAG00000003863 vs. GO
Match: - (symbol:MRPL27 "39S ribosomal protein L27, mitochondrial" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR15893 HGNC:HGNC:14483 ChiTaRS:MRPL27 EMBL:AC015909 EMBL:AC004707 ProteinModelPortal:H7C5U8 Ensembl:ENST00000508200 NextBio:35530640 Uniprot:H7C5U8)

HSP 1 Score: 46.9802 bits (110), Expect = 4.720e-6
Identity = 38/125 (30.40%), Postives = 55/125 (44.00%), Query Frame = 0

Query:   44 GVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPG-----LNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLL 163
             VR   K+S GS+KN  G   G+++G K  +G  V  G+ +  Q H    PG     L    G    + A   G V +T E       N   V    +   KG  +++T VHV+P +    FKL+
Sbjct:   10 AVRYASKKSGGSSKNLGGKSSGRRQGIKKMEGHYVHAGNIIATQRHFRWHPGAHVCVLQVGVGKNKCLYALEEGIVRYTKEVYVPHPRNTEAVD-LITRLPKGAVLYKTFVHVVPAKPEGTFKLV 133

[Close]

BLAST of EMLSAG00000003863 vs. C. finmarchicus
Match: gi|592793276|gb|GAXK01161292.1| (TSA: Calanus finmarchicus comp34005_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 118.627 bits (296), Expect = 1.621e-32
Identity = 57/126 (45.24%), Postives = 80/126 (63.49%), Query Frame = 0

Query:   45 VRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSY------VQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLD 164
            VR   K++  ST+N+C    GK+RG KV+DGQRVP+G  LV Q+ + V PG NT+  + C+I+A  HGR M T E+  +D + D+Y      +     + L   N++R  VHV+PDEQHQYFKL+D
Sbjct:   64 VRNASKKAGASTRNRCQRTPGKRRGIKVFDGQRVPHGKLLVKQLRLQVLPGWNTKMLNTCNIVALTHGRAMLTTEK--IDPKLDAYSALPARLGEVMPQHLLNENIYRVHVHVVPDEQHQYFKLVD 435

[Close]

BLAST of EMLSAG00000003863 vs. C. finmarchicus
Match: gi|592793277|gb|GAXK01161291.1| (TSA: Calanus finmarchicus comp34005_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 118.627 bits (296), Expect = 2.073e-32
Identity = 57/126 (45.24%), Postives = 80/126 (63.49%), Query Frame = 0

Query:   45 VRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSY------VQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLD 164
            VR   K++  ST+N+C    GK+RG KV+DGQRVP+G  LV Q+ + V PG NT+  + C+I+A  HGR M T E+  +D + D+Y      +     + L   N++R  VHV+PDEQHQYFKL+D
Sbjct:   64 VRNASKKAGASTRNRCQRTPGKRRGIKVFDGQRVPHGKLLVKQLRLQVLPGWNTKMLNTCNIVALTHGRAMLTTEK--IDPKLDAYSALPARLGEVMPQHLLNENIYRVHVHVVPDEQHQYFKLVD 435

[Close]

BLAST of EMLSAG00000003863 vs. C. finmarchicus
Match: gi|592915090|gb|GAXK01043285.1| (TSA: Calanus finmarchicus comp51372_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.187 bits (69), Expect = 1.759e+0
Identity = 17/66 (25.76%), Postives = 34/66 (51.52%), Query Frame = 0

Query:   39 SWLLGGVRGKKKQSSGSTKNQCGFP---VGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFG 101
            SW+ G  R + ++   + K   G+P   + +K+   +Y+   V  G   +N I+M+++ G N  +G
Sbjct: 1629 SWMDGETRERARKKLSTMKEYIGYPKEIMIEKKLEDLYENLHVNLGDHFINGINMSIW-GTNYAWG 1823

[Close]

BLAST of EMLSAG00000003863 vs. L. salmonis peptides
Match: EMLSAP00000003863 (pep:novel supercontig:LSalAtl2s:LSalAtl2s209:636122:636750:-1 gene:EMLSAG00000003863 transcript:EMLSAT00000003863 description:"maker-LSalAtl2s209-augustus-gene-5.13")

HSP 1 Score: 342.813 bits (878), Expect = 1.902e-121
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0

Query:    1 MMASSLSNSLRPLVSGLLASGAGTTVLLDGGVSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDSN 166
            MMASSLSNSLRPLVSGLLASGAGTTVLLDGGVSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDSN
Sbjct:    1 MMASSLSNSLRPLVSGLLASGAGTTVLLDGGVSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDSN 166

[Close]

BLAST of EMLSAG00000003863 vs. SwissProt
Match: gi|20139649|sp|Q99N92.1|RM27_MOUSE (RecName: Full=39S ribosomal protein L27, mitochondrial; Short=L27mt; Short=MRP-L27; Flags: Precursor)

HSP 1 Score: 51.9878 bits (123), Expect = 7.440e-8
Identity = 47/164 (28.66%), Postives = 70/164 (42.68%), Query Frame = 0

Query:    1 MMASSLSNSLRPLVSGLLASGAGTTVLLDGGVSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLD 164
            M A++L+   R  V+ LL+  A T +                  VR   K++ GS+KN  G   GK  G K  +G  V  G+ L  Q      PG +   G    + A   G V +T +    + +N   V    S   KG  +++T VHV+P +    FKL+D
Sbjct:    1 MAAAALTLRTRAAVTALLSPTAPTAL-----------------AVRHASKKTGGSSKNLGGKSRGKHYGIKKMEGHYVHAGNILGTQRQFRWHPGAHVGLGRNKCLYALEEGIVRYTKDVYVPNPKNTEAVDLVTSLP-KGAVLYKTFVHVVPAKPEGTFKLVD 146

[Close]

BLAST of EMLSAG00000003863 vs. SwissProt
Match: gi|20139806|sp|Q9P0M9.1|RM27_HUMAN (RecName: Full=39S ribosomal protein L27, mitochondrial; Short=L27mt; Short=MRP-L27; Flags: Precursor)

HSP 1 Score: 51.9878 bits (123), Expect = 7.753e-8
Identity = 37/120 (30.83%), Postives = 55/120 (45.83%), Query Frame = 0

Query:   44 GVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLL 163
             VR   K+S GS+KN  G   G+++G K  +G  V  G+ +  Q H    PG +   G    + A   G V +T E       N   V    +   KG  +++T VHV+P +    FKL+
Sbjct:   27 AVRYASKKSGGSSKNLGGKSSGRRQGIKKMEGHYVHAGNIIATQRHFRWHPGAHVGVGKNKCLYALEEGIVRYTKEVYVPHPRNTEAVD-LITRLPKGAVLYKTFVHVVPAKPEGTFKLV 145

[Close]

BLAST of EMLSAG00000003863 vs. SwissProt
Match: gi|108860946|sp|Q32PC3.1|RM27_BOVIN (RecName: Full=39S ribosomal protein L27, mitochondrial; Short=L27mt; Short=MRP-L27; Flags: Precursor)

HSP 1 Score: 50.447 bits (119), Expect = 3.068e-7
Identity = 35/120 (29.17%), Postives = 56/120 (46.67%), Query Frame = 0

Query:   44 GVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLL 163
             VR   K++ GS+KN  G   GK+ G +  +G  V  G+ L  Q H    PG +   G    + A   G V +T E   +   ++S      +   +G  +++T VHV+P +    FKL+
Sbjct:   27 AVRYASKKTGGSSKNLGGKSPGKRFGIRKMEGHYVHAGNILATQRHFRWHPGAHVGLGKNKCLYALEEGVVRYTKE-VYVPSPSNSEAVDLVTRLPEGAVLYKTFVHVVPAKPEGTFKLV 145

[Close]

BLAST of EMLSAG00000003863 vs. Select Arthropod Genomes
Match: EAA08179.5 (AGAP002470-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 81.6481 bits (200), Expect = 1.814e-19
Identity = 44/121 (36.36%), Postives = 70/121 (57.85%), Query Frame = 0

Query:   45 VRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            VR   K++ GS++N    P  K RG KV DG  V  G+ LV Q      PGLN  FG   ++ A  HG+V  T E+ + ++++ ++VQR ++   +G+ +++   +V+P  QHQ FKL+D 
Sbjct:   23 VRNASKKTGGSSRNPPKHPRPKHRGWKVQDGHHVSAGTILVTQRTTRFHPGLNVGFGKNGTLFAMEHGKVYVTCEKIDPNWDH-TWVQRCYA-GREGQTIYKKFFNVVPAPQHQRFKLIDE 141

[Close]

BLAST of EMLSAG00000003863 vs. Select Arthropod Genomes
Match: AHN54117.1 (mitochondrial ribosomal protein L27, isoform C [Drosophila melanogaster])

HSP 1 Score: 81.2629 bits (199), Expect = 1.991e-19
Identity = 42/125 (33.60%), Postives = 74/125 (59.20%), Query Frame = 0

Query:   41 LLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            L+  VR   K++ GST+N+ G    K RG +V DG  V  G+ L  Q+     PGLN  FG   ++ A  HG+V  T E  + ++++ +++QR ++   +G+N+++   +V+P+ QHQ F+L++ 
Sbjct:   15 LMTTVRNASKKTGGSTRNKKGHARPKHRGWRVQDGHHVSEGTILATQLTTRFHPGLNVGFGRNGTLFAMEHGKVYVTCEAIDPNWDH-TWIQRNYA-GRQGQNIYKKFFNVVPENQHQRFRLVEE 137

[Close]

BLAST of EMLSAG00000003863 vs. Select Arthropod Genomes
Match: AGB92564.1 (mitochondrial ribosomal protein L27, isoform B [Drosophila melanogaster])

HSP 1 Score: 81.2629 bits (199), Expect = 1.991e-19
Identity = 42/125 (33.60%), Postives = 74/125 (59.20%), Query Frame = 0

Query:   41 LLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            L+  VR   K++ GST+N+ G    K RG +V DG  V  G+ L  Q+     PGLN  FG   ++ A  HG+V  T E  + ++++ +++QR ++   +G+N+++   +V+P+ QHQ F+L++ 
Sbjct:   15 LMTTVRNASKKTGGSTRNKKGHARPKHRGWRVQDGHHVSEGTILATQLTTRFHPGLNVGFGRNGTLFAMEHGKVYVTCEAIDPNWDH-TWIQRNYA-GRQGQNIYKKFFNVVPENQHQRFRLVEE 137

[Close]

BLAST of EMLSAG00000003863 vs. Select Arthropod Genomes
Match: AAO41158.1 (mitochondrial ribosomal protein L27, isoform A [Drosophila melanogaster])

HSP 1 Score: 81.2629 bits (199), Expect = 1.991e-19
Identity = 42/125 (33.60%), Postives = 74/125 (59.20%), Query Frame = 0

Query:   41 LLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            L+  VR   K++ GST+N+ G    K RG +V DG  V  G+ L  Q+     PGLN  FG   ++ A  HG+V  T E  + ++++ +++QR ++   +G+N+++   +V+P+ QHQ F+L++ 
Sbjct:   15 LMTTVRNASKKTGGSTRNKKGHARPKHRGWRVQDGHHVSEGTILATQLTTRFHPGLNVGFGRNGTLFAMEHGKVYVTCEAIDPNWDH-TWIQRNYA-GRQGQNIYKKFFNVVPENQHQRFRLVEE 137

[Close]

BLAST of EMLSAG00000003863 vs. Select Arthropod Genomes
Match: EFX73953.1 (hypothetical protein DAPPUDRAFT_200344 [Daphnia pulex])

HSP 1 Score: 79.7221 bits (195), Expect = 9.344e-19
Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 0

Query:   27 LLDGGVSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLD 164
            LL   +++ Q    L   VR   K++ GS++N  G   GK+RG K  DG +V   S L+ Q+H+   PGLN   G   S+ A   GRV+ T E+   +F+     + Y S      N+++   HVIP+     FKL+D
Sbjct:    3 LLTQILTNLQPCKTLNSTVRWASKKAGGSSRNPKGHAPGKRRGIKTQDGSKVTQSSILLRQLHIRCHPGLNVGMGKDGSLYALQPGRVLITCEKFEPNFDKYWTNKAYGSRKENMNNVYKKYFHVIPEPLEPKFKLVD 140

[Close]

BLAST of EMLSAG00000003863 vs. Select Arthropod Genomes
Match: gb|EEZ99502.1| (39S ribosomal protein L27, mitochondrial-like Protein [Tribolium castaneum])

HSP 1 Score: 75.0998 bits (183), Expect = 5.145e-17
Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 0

Query:   45 VRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            VR   K++ GST+N       K RG KV DG RV  GS L  Q ++   PGLN  FG   ++ A   GRV+ T E+ +L++ + ++VQR      + +  ++   +++PD+QHQ FKL+D 
Sbjct:   23 VRFASKKTGGSTQNTHTKVRPKHRGWKVQDGHRVEAGSILATQRNLRFHPGLNVGFGRNGTLFAIVPGRVVVTCEKVDLNWTH-TWVQRCHGLR-QDKEFYKKYFNILPDKQHQNFKLIDQ 141

[Close]

BLAST of EMLSAG00000003863 vs. Select Arthropod Genomes
Match: gb|EEC00188.1| (ribosomal protein L27, putative, partial [Ixodes scapularis])

HSP 1 Score: 63.929 bits (154), Expect = 9.618e-13
Identity = 46/140 (32.86%), Postives = 65/140 (46.43%), Query Frame = 0

Query:   24 TTVLLDGGVSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLL 163
            T+ L     S A    W    VRG  K +    ++  G   G + G + + GQRV  G  LV Q  +   PGLN  FG R S++A   GRV  T E+ N  ++N      Y   D+   ++ +   HVIPD Q   F+L+
Sbjct:    2 TSTLCQSTDSRAGGPQWQ--AVRGATKGNRACRQD--GPQRGHRYGWRKWSGQRVHEGELLVKQRTLRFHPGLNVVFGYRHSLLAAVEGRVAVTFEKVNPCWDNPRVQSFYEGRDVS--SLHKKYYHVIPDPQENKFRLV 135

[Close]

BLAST of EMLSAG00000003863 vs. Select Arthropod Genomes
Match: XP_395088.1 (PREDICTED: 39S ribosomal protein L27, mitochondrial isoform X2 [Apis mellifera])

HSP 1 Score: 63.5438 bits (153), Expect = 1.663e-12
Identity = 40/124 (32.26%), Postives = 59/124 (47.58%), Query Frame = 0

Query:   42 LGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            L  VR   K+SS ST+N     + K RG +V DG  V   + L  Q+     PGL   FG   ++ A   G+VM T E+ N +         Y   D +   +++   +VIP+ QH  F L+D+
Sbjct:   25 LACVRYASKKSSTSTRNAPIRTIPKHRGWRVQDGHYVKESTILATQLKPRFHPGLYVGFGKNGTLYALESGKVMITCEKINPNMSRSWARLNY--ADRENNVIYKKHFNVIPESQHNRFVLIDT 146

[Close]

BLAST of EMLSAG00000003863 vs. Select Arthropod Genomes
Match: XP_006562041.1 (PREDICTED: 39S ribosomal protein L27, mitochondrial isoform X2 [Apis mellifera])

HSP 1 Score: 63.5438 bits (153), Expect = 1.663e-12
Identity = 40/124 (32.26%), Postives = 59/124 (47.58%), Query Frame = 0

Query:   42 LGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            L  VR   K+SS ST+N     + K RG +V DG  V   + L  Q+     PGL   FG   ++ A   G+VM T E+ N +         Y   D +   +++   +VIP+ QH  F L+D+
Sbjct:   25 LACVRYASKKSSTSTRNAPIRTIPKHRGWRVQDGHYVKESTILATQLKPRFHPGLYVGFGKNGTLYALESGKVMITCEKINPNMSRSWARLNY--ADRENNVIYKKHFNVIPESQHNRFVLIDT 146

[Close]

BLAST of EMLSAG00000003863 vs. Select Arthropod Genomes
Match: XP_006562040.1 (PREDICTED: 39S ribosomal protein L27, mitochondrial isoform X1 [Apis mellifera])

HSP 1 Score: 63.1586 bits (152), Expect = 2.947e-12
Identity = 40/124 (32.26%), Postives = 59/124 (47.58%), Query Frame = 0

Query:   42 LGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            L  VR   K+SS ST+N     + K RG +V DG  V   + L  Q+     PGL   FG   ++ A   G+VM T E+ N +         Y   D +   +++   +VIP+ QH  F L+D+
Sbjct:   38 LACVRYASKKSSTSTRNAPIRTIPKHRGWRVQDGHYVKESTILATQLKPRFHPGLYVGFGKNGTLYALESGKVMITCEKINPNMSRSWARLNY--ADRENNVIYKKHFNVIPESQHNRFVLIDT 159

[Close]

BLAST of EMLSAG00000003863 vs. nr
Match: gi|290561557|gb|ADD38179.1| (39S ribosomal protein L27, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 343.199 bits (879), Expect = 1.455e-119
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0

Query:    1 MMASSLSNSLRPLVSGLLASGAGTTVLLDGGVSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDSN 166
            MMASSLSNSLRPLVSGLLASGAGTTVLLDGGVSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGS LVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDSN
Sbjct:    1 MMASSLSNSLRPLVSGLLASGAGTTVLLDGGVSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSVLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDSN 166

[Close]

BLAST of EMLSAG00000003863 vs. nr
Match: gi|568255155|gb|ETN63995.1| (mitochondrial 39S ribosomal protein L27 [Anopheles darlingi])

HSP 1 Score: 87.0409 bits (214), Expect = 6.231e-19
Identity = 48/134 (35.82%), Postives = 79/134 (58.96%), Query Frame = 0

Query:   32 VSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            ++S+  +S  L  VR   K++ GS++N    P  K RG KV DG  V  G+ LV Q      PGLN  FG   ++ A  HG+V  T E+ +L++++ ++VQR ++   +G+ +++   +V+P+ QHQ FKL+D 
Sbjct:    8 IASSWTSSPFLVPVRNASKKTGGSSRNPPKNPRPKHRGWKVQDGHNVSAGTILVTQRTPRFHPGLNVGFGKNGTLFAMEHGKVYVTCEKVDLNWDH-TWVQRCYA-GREGQTIYKKFFNVVPEPQHQRFKLIDE 139

[Close]

BLAST of EMLSAG00000003863 vs. nr
Match: gi|751472383|ref|XP_011191501.1| (PREDICTED: 39S ribosomal protein L27, mitochondrial [Bactrocera cucurbitae])

HSP 1 Score: 85.8853 bits (211), Expect = 2.015e-18
Identity = 44/125 (35.20%), Postives = 75/125 (60.00%), Query Frame = 0

Query:   41 LLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            L+  +R   K++ GST+N+ G P  K RG +V DG  V  G+ L  Q+     PG+N  FG   ++ A  HGRV  T E+ + D+++ ++VQR ++   +G+ +++   +VIP+ QHQ F+L++ 
Sbjct:   20 LITTIRNASKKTGGSTRNKKGHPRPKHRGWRVQDGHWVSQGTLLATQLTTRFHPGMNVGFGRNGTLYAMEHGRVYVTCEQLDPDWDH-TWVQRNYA-GREGQTIYKKFFNVIPEPQHQRFRLIEE 142

[Close]

BLAST of EMLSAG00000003863 vs. nr
Match: gi|1062661160|ref|XP_017954456.1| (PREDICTED: 39S ribosomal protein L27, mitochondrial [Drosophila navojoa])

HSP 1 Score: 85.8853 bits (211), Expect = 2.149e-18
Identity = 43/125 (34.40%), Postives = 76/125 (60.80%), Query Frame = 0

Query:   41 LLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            L+  +R   K++ GST+N+ G P  K RG +V DG  V +G+ L  Q+     PGLN   G   ++ A  HG+V+ T E  + ++++ +++QR ++   +G+ +++   +VIP+EQHQ F+L+D 
Sbjct:   20 LITTIRNASKKTGGSTRNKKGHPRPKHRGWRVQDGHYVSHGTILATQLTTRFHPGLNVGLGRNGTLFAIEHGKVVVTCEPIDPNWDH-TWIQRNYA-GRQGQTIYKKFFNVIPEEQHQRFRLVDE 142

[Close]

BLAST of EMLSAG00000003863 vs. nr
Match: gi|907740255|ref|XP_013116345.1| (PREDICTED: 39S ribosomal protein L27, mitochondrial [Stomoxys calcitrans])

HSP 1 Score: 85.5001 bits (210), Expect = 2.317e-18
Identity = 45/125 (36.00%), Postives = 75/125 (60.00%), Query Frame = 0

Query:   41 LLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            LL  +R   K++ GST+N+ G P  K RG +V DG  V  G+ L  Q+     PGLN  FG   ++ A  HG+V  T E  + ++++ ++VQR+++   +G+ + +   +V+P+EQHQ F+L+D 
Sbjct:   20 LLTTIRNASKKTGGSTRNKKGHPRPKHRGWRVQDGHWVSQGTILATQLTTRFHPGLNVGFGRNGTLFAMDHGKVYVTCEPLDPNWDH-TWVQRHYA-GREGQPIHKKFFNVVPEEQHQRFRLVDE 142

[Close]

BLAST of EMLSAG00000003863 vs. nr
Match: gi|751801386|ref|XP_011210736.1| (PREDICTED: 39S ribosomal protein L27, mitochondrial [Bactrocera dorsalis] >gi|1098652828|ref|XP_018790792.1| PREDICTED: 39S ribosomal protein L27, mitochondrial [Bactrocera latifrons])

HSP 1 Score: 85.5001 bits (210), Expect = 2.811e-18
Identity = 44/125 (35.20%), Postives = 75/125 (60.00%), Query Frame = 0

Query:   41 LLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            L+  +R   K++ GST+N+ G P  K RG +V DG  V  G+ L  Q+     PG+N  FG   ++ A  HGRV  T E+ + ++++ ++VQR ++   +G+ +++   +VIP+ QHQ F+L+D 
Sbjct:   20 LITTIRNASKKTGGSTRNKKGHPRPKHRGWRVQDGHWVSQGTLLATQLTTRFHPGMNVGFGRNGTLYAMEHGRVYVTCEQLDPNWDH-TWVQRNYA-GREGQTIYKKFFNVIPEPQHQRFRLIDE 142

[Close]

BLAST of EMLSAG00000003863 vs. nr
Match: gi|906460072|gb|KNC22918.1| (hypothetical protein FF38_00357 [Lucilia cuprina])

HSP 1 Score: 84.3445 bits (207), Expect = 7.799e-18
Identity = 46/141 (32.62%), Postives = 81/141 (57.45%), Query Frame = 0

Query:   25 TVLLDGGVSSAQRTSWLLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            T+L    ++  +    LL  +R   K++ GST+N+ G P  K RG +V DG  V  G+ L  Q+     PGLN  FG   ++ A  HG+V  T E  + ++++ +++QR+++   +G+ + +   +VIP++QHQ F+L+D 
Sbjct:    4 TILQKLSLTCLKADQPLLTTIRNASKKTGGSTRNKKGHPRPKHRGWRVQDGHYVSQGTLLATQLTTRFHPGLNVGFGRNGTLFAMEHGKVYVTCEPIDPNWDH-TWIQRHYA-GREGQPIHKKFFNVIPEKQHQRFRLVDE 142

[Close]

BLAST of EMLSAG00000003863 vs. nr
Match: gi|924552836|gb|ALC38111.1| (mRpL27 [Drosophila busckii])

HSP 1 Score: 83.9593 bits (206), Expect = 9.587e-18
Identity = 44/125 (35.20%), Postives = 75/125 (60.00%), Query Frame = 0

Query:   41 LLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            LL  +R   K++ GST+N+ G P  K RG +V DG  V  G+ L  Q+     PGLN  FG   ++ A  HG+V+ T E  + ++++ S+VQR ++   + + +++   +VIP++QHQ F+L++ 
Sbjct:   15 LLTTIRNASKKTGGSTRNKKGHPRPKHRGWRVLDGHNVSEGTILATQLTTRFHPGLNVGFGRNGTLFAMEHGKVVITCETIDPNWDH-SWVQRNYA-GRQDQTIYKKFFNVIPEKQHQRFRLVEE 137

[Close]

BLAST of EMLSAG00000003863 vs. nr
Match: gi|1060151646|ref|XP_017849788.1| (PREDICTED: 39S ribosomal protein L27, mitochondrial [Drosophila busckii])

HSP 1 Score: 83.9593 bits (206), Expect = 1.053e-17
Identity = 44/125 (35.20%), Postives = 75/125 (60.00%), Query Frame = 0

Query:   41 LLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            LL  +R   K++ GST+N+ G P  K RG +V DG  V  G+ L  Q+     PGLN  FG   ++ A  HG+V+ T E  + ++++ S+VQR ++   + + +++   +VIP++QHQ F+L++ 
Sbjct:   20 LLTTIRNASKKTGGSTRNKKGHPRPKHRGWRVLDGHNVSEGTILATQLTTRFHPGLNVGFGRNGTLFAMEHGKVVITCETIDPNWDH-SWVQRNYA-GRQDQTIYKKFFNVIPEKQHQRFRLVEE 142

[Close]

BLAST of EMLSAG00000003863 vs. nr
Match: gi|498943421|ref|XP_004521875.1| (PREDICTED: 39S ribosomal protein L27, mitochondrial [Ceratitis capitata])

HSP 1 Score: 83.9593 bits (206), Expect = 1.185e-17
Identity = 44/125 (35.20%), Postives = 74/125 (59.20%), Query Frame = 0

Query:   41 LLGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTNLDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLDS 165
            L+  +R   K++ GST+N+ G P  K RG +V DG  V  G+ L  Q+     PG+N  FG   ++ A  HGRV  T E+ + ++++ ++VQR ++   +G+ +++   +VIP+ QHQ F+L D 
Sbjct:   20 LITTIRNASKKTGGSTRNKKGHPRPKHRGWRVQDGHWVSQGTLLATQLTTRFHPGMNVGFGRNGTLYAMEHGRVYVTCEQLDPNWDH-TWVQRNYA-GREGQTIYKKFFNVIPEPQHQRFRLKDE 142

[Close]

BLAST of EMLSAG00000003863 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1518_size37722-snap-gene-0.13 (protein:Tk01678 transcript:maker-scaffold1518_size37722-snap-gene-0.13-mRNA-1 annotation:"39s ribosomal protein mitochondrial")

HSP 1 Score: 109.383 bits (272), Expect = 3.756e-31
Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 0

Query:   42 LGGVRGKKKQSSGSTKNQCGFPVGKKRGAKVYDGQRVPYGSXLVNQIHMTVFPGLNTRFGSRCSIMATHHGRVMFTVERTN----LDFENDSYVQRYFSEDLKGRNMFRTTVHVIPDEQHQYFKLLD 164
            LGGVRGKK ++SGSTKN  G P GKKRG KV+DGQRV  G+ L    H+ + PG N    +R ++ AT HGRVM T E  +    +D         +   D     ++R  +H+IPDEQHQYFKL +
Sbjct:   32 LGGVRGKKIKASGSTKNVAGHPTGKKRGVKVFDGQRVQIGTRLAMLRHLDILPGWNVVSRTR-NLFATCHGRVMITTEVCDPGEHVDLLMSPTRHPFHKYDADKGRVYRLHLHIIPDEQHQYFKLTE 157

The following BLAST results are available for this feature:

BLAST of EMLSAG00000003863 vs. GO
BLAST of EMLSAG00000003863 vs. C. finmarchicus
BLAST of EMLSAG00000003863 vs. L. salmonis peptides
BLAST of EMLSAG00000003863 vs. SwissProt
BLAST of EMLSAG00000003863 vs. Select Arthropod Genomes
BLAST of EMLSAG00000003863 vs. nr
BLAST of EMLSAG00000003863 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000003863 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 9


Match Name	E-value	Identity	Description
-	2.880e-18	33.60	symbol:mRpL27 "mitochondrial ribosomal protein L27...	[more]
-	2.791e-8	29.93	symbol:Mrpl27 "mitochondrial ribosomal protein L27...	[more]
-	7.760e-8	30.83	symbol:MRPL27 "Uncharacterized protein" species:96...	[more]
-	8.053e-8	28.66	symbol:Mrpl27 "mitochondrial ribosomal protein L27...	[more]
-	8.381e-8	30.83	symbol:MRPL27 "39S ribosomal protein L27, mitochon...	[more]
-	1.087e-7	30.83	symbol:MRPL27 "Uncharacterized protein" species:98...	[more]
-	3.230e-7	29.17	symbol:MRPL27 "39S ribosomal protein L27, mitochon...	[more]
-	3.364e-6	29.75	symbol:mrpl27 "mitochondrial ribosomal protein L27...	[more]
-	4.720e-6	30.40	symbol:MRPL27 "39S ribosomal protein L27, mitochon...	[more]

BLAST of EMLSAG00000003863 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 3


Match Name	E-value	Identity	Description
gi\|592793276\|gb\|GAXK01161292.1\|	1.621e-32	45.24	TSA: Calanus finmarchicus comp34005_c0_seq2 transc...	[more]
gi\|592793277\|gb\|GAXK01161291.1\|	2.073e-32	45.24	TSA: Calanus finmarchicus comp34005_c0_seq1 transc...	[more]
gi\|592915090\|gb\|GAXK01043285.1\|	1.759e+0	25.76	TSA: Calanus finmarchicus comp51372_c0_seq1 transc...	[more]

BLAST of EMLSAG00000003863 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAP00000003863	1.902e-121	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s209:63612...	[more]

BLAST of EMLSAG00000003863 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
gi\|20139649\|sp\|Q99N92.1\|RM27_MOUSE	7.440e-8	28.66	RecName: Full=39S ribosomal protein L27, mitochond...	[more]
gi\|20139806\|sp\|Q9P0M9.1\|RM27_HUMAN	7.753e-8	30.83	RecName: Full=39S ribosomal protein L27, mitochond...	[more]
gi\|108860946\|sp\|Q32PC3.1\|RM27_BOVIN	3.068e-7	29.17	RecName: Full=39S ribosomal protein L27, mitochond...	[more]

BLAST of EMLSAG00000003863 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 12


Match Name	E-value	Identity	Description
EAA08179.5	1.814e-19	36.36	AGAP002470-PA [Anopheles gambiae str. PEST]	[more]
AHN54117.1	1.991e-19	33.60	mitochondrial ribosomal protein L27, isoform C [Dr...	[more]
AGB92564.1	1.991e-19	33.60	mitochondrial ribosomal protein L27, isoform B [Dr...	[more]
AAO41158.1	1.991e-19	33.60	mitochondrial ribosomal protein L27, isoform A [Dr...	[more]
EFX73953.1	9.344e-19	34.06	hypothetical protein DAPPUDRAFT_200344 [Daphnia pu...	[more]
gb\|EEZ99502.1\|	5.145e-17	37.19	39S ribosomal protein L27, mitochondrial-like Prot...	[more]
gb\|EEC00188.1\|	9.618e-13	32.86	ribosomal protein L27, putative, partial [Ixodes s...	[more]
XP_395088.1	1.663e-12	32.26	PREDICTED: 39S ribosomal protein L27, mitochondria...	[more]
XP_006562041.1	1.663e-12	32.26	PREDICTED: 39S ribosomal protein L27, mitochondria...	[more]
XP_006562040.1	2.947e-12	32.26	PREDICTED: 39S ribosomal protein L27, mitochondria...	[more]

Pages

BLAST of EMLSAG00000003863 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|290561557\|gb\|ADD38179.1\|	1.455e-119	99.40	39S ribosomal protein L27, mitochondrial [Lepeopht...	[more]
gi\|568255155\|gb\|ETN63995.1\|	6.231e-19	35.82	mitochondrial 39S ribosomal protein L27 [Anopheles...	[more]
gi\|751472383\|ref\|XP_011191501.1\|	2.015e-18	35.20	PREDICTED: 39S ribosomal protein L27, mitochondria...	[more]
gi\|1062661160\|ref\|XP_017954456.1\|	2.149e-18	34.40	PREDICTED: 39S ribosomal protein L27, mitochondria...	[more]
gi\|907740255\|ref\|XP_013116345.1\|	2.317e-18	36.00	PREDICTED: 39S ribosomal protein L27, mitochondria...	[more]
gi\|751801386\|ref\|XP_011210736.1\|	2.811e-18	35.20	PREDICTED: 39S ribosomal protein L27, mitochondria...	[more]
gi\|906460072\|gb\|KNC22918.1\|	7.799e-18	32.62	hypothetical protein FF38_00357 [Lucilia cuprina]	[more]
gi\|924552836\|gb\|ALC38111.1\|	9.587e-18	35.20	mRpL27 [Drosophila busckii]	[more]
gi\|1060151646\|ref\|XP_017849788.1\|	1.053e-17	35.20	PREDICTED: 39S ribosomal protein L27, mitochondria...	[more]
gi\|498943421\|ref\|XP_004521875.1\|	1.185e-17	35.20	PREDICTED: 39S ribosomal protein L27, mitochondria...	[more]

Pages

BLAST of EMLSAG00000003863 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1


Match Name	E-value	Identity	Description
maker-scaffold1518_size37722-snap-gene-0.13	3.756e-31	46.46	protein:Tk01678 transcript:maker-scaffold1518_size...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s209	supercontig	LSalAtl2s209:636122..636750 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s209-augustus-gene-5.13
Biotype	protein_coding
Evidence	IEA
Note	39S ribosomal protein L27, mitochondrial [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000003863 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000003863	EMLSAT00000003863-699710	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s209:636122..636750-

gene from alignment at LSalAtl2s209:636122..636750-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000003863-686629 ID=EMLSAG00000003863-686629|Name=EMLSAG00000003863|organism=Lepeophtheirus salmonis|type=gene|length=629bp|location=Sequence derived from alignment at LSalAtl2s209:636122..636750- (Lepeophtheirus salmonis)
ATGATGGCCTCTTCTTTATCAAATAGTCTTCGTCCCTTAGTGTCTGGCCT
TCTCGCATCTGGAGCTGGRACGACTGTGTTATTAGATGGAGGCGTTTCTT
CTGCTCAGCGTAATTTTTATATAACTTTTGGTGTTTTTAAATGATTTTAC
AGAATTTTTTTTATCCGTTAACGAACTTCTAGGAACTTCCTGGCTCCTTG
GAGGTGTAAGAGGTAAGAAGAAACAAAGCTCTGGTTCTACAAAAAATCAA
TGCGGTTTCCCCGTGGGTAAGAAAAGAGGAGCCAAGGTCTACGATGGCCA
ACGCGTTCCTTATGGCAGCGKTCTTGTGAATCAAATACATATGACTGTTT
TTCCTGGCCTCAATGTATGAATATTTATTTTGTAACCCTTAAATTTTCAT
TGATTCAGGTTTATTGCAGACTCGATTTGGCTCTAGATGTAGCATTATGG
CCACTCATCACGGACGAGTAATGTTTACTGTTGAACGAACTAATTTAGAC
TTTGAAAATGATAGTTATGTTCAGCGTTATTTTAGTGAAGATCTAAAGGG
AAGAAACATGTTCAGAACAACGGTTCACGTCATACCCGATGAGCAGCATC
AATATTTTAAATTATTGGACTCTAATTAA

Add to Basket

Pages

Pages

Search form