EMLSAG00000004225, EMLSAG00000004225-686991 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000004225
Unique Name	EMLSAG00000004225-686991
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000004225 vs. GO
Match: - (symbol:CELE_F56D2.5 "Protein F56D2.5" species:6239 "Caenorhabditis elegans" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00591 SMART:SM00647 GO:GO:0008270 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 EMBL:FO080358 eggNOG:NOG266709 KO:K11971 GeneTree:ENSGT00740000115249 OrthoDB:EOG7BGHKF PIR:T16477 RefSeq:NP_498196.1 UniGene:Cel.34385 ProteinModelPortal:Q20871 SMR:Q20871 STRING:6239.F56D2.5 EnsemblMetazoa:F56D2.5 GeneID:186378 KEGG:cel:CELE_F56D2.5 UCSC:F56D2.5 CTD:186378 WormBase:F56D2.5 HOGENOM:HOG000018787 InParanoid:Q20871 OMA:ECESAEC NextBio:931628 Uniprot:Q20871)

HSP 1 Score: 49.2914 bits (116), Expect = 7.470e-7
Identity = 25/73 (34.25%), Postives = 41/73 (56.16%), Query Frame = 0

Query:    7 RFHAKNNENL---WINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            +F  ++ E +   W  AD+  +++M K Y +K +   +   L+   +++ S  CP CL  I+K EGCNKM CT
Sbjct:  316 KFRKEDEERIMKEWNEADEAGKEEMYKRYGEKNMKALEERFLNRGWLEENSKQCPKCLVYIEKDEGCNKMHCT 388

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BLAST of EMLSAG00000004225 vs. GO
Match: - (symbol:Rnf14 "ring finger protein 14" species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA] [GO:0019787 "small conjugating protein ligase activity" evidence=ISO;ISS] [GO:0032355 "response to estradiol" evidence=ISO] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=ISO] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=ISO] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 MGI:MGI:1929668 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CH466528 GO:GO:0032355 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0050681 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 eggNOG:NOG266709 KO:K11971 OMA:QYFCWLC GeneTree:ENSGT00740000115249 CTD:9604 HOVERGEN:HBG057296 TreeFam:TF314401 EMBL:AF249667 EMBL:AF249668 EMBL:AK011316 EMBL:AK009783 EMBL:AK010162 EMBL:BC054841 EMBL:BC094250 RefSeq:NP_001158093.1 RefSeq:NP_001158094.1 RefSeq:NP_064396.2 RefSeq:XP_006526184.1 RefSeq:XP_006526185.1 RefSeq:XP_006526186.1 RefSeq:XP_006526187.1 RefSeq:XP_006526188.1 RefSeq:XP_006526189.1 RefSeq:XP_006526190.1 UniGene:Mm.228903 ProteinModelPortal:Q9JI90 SMR:Q9JI90 BioGrid:208150 IntAct:Q9JI90 PhosphoSite:Q9JI90 PaxDb:Q9JI90 PRIDE:Q9JI90 Ensembl:ENSMUST00000072376 Ensembl:ENSMUST00000171461 GeneID:56736 KEGG:mmu:56736 UCSC:uc008ese.2 HOGENOM:HOG000237334 InParanoid:Q7TPR0 OrthoDB:EOG7BGHKF NextBio:313224 PRO:PR:Q9JI90 ArrayExpress:Q9JI90 Bgee:Q9JI90 CleanEx:MM_RNF14 Genevestigator:Q9JI90 Uniprot:Q9JI90)

HSP 1 Score: 46.9802 bits (110), Expect = 4.961e-6
Identity = 21/62 (33.87%), Postives = 38/62 (61.29%), Query Frame = 0

Query:   15 NLWINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            N ++ AD+  ++ +++ Y ++ + +   E+ S D ++  S +CP C   IQK +GCNKM CT
Sbjct:  363 NEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCT 424

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BLAST of EMLSAG00000004225 vs. GO
Match: - (symbol:Rnf14 "Rnf14 protein" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019787 "small conjugating protein ligase activity" evidence=IEA] [GO:0032355 "response to estradiol" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=IEA] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 RGD:1589576 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0008152 GO:GO:0032355 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 EMBL:CH473974 eggNOG:NOG266709 KO:K11971 OMA:QYFCWLC GeneTree:ENSGT00740000115249 CTD:9604 HOVERGEN:HBG057296 OrthoDB:EOG7BGHKF EMBL:AABR06094692 EMBL:AABR06094695 EMBL:AABR06094693 EMBL:AABR06094694 EMBL:BC103648 RefSeq:NP_001030167.1 RefSeq:XP_006254698.1 RefSeq:XP_006254699.1 RefSeq:XP_006254700.1 UniGene:Rn.115357 UniGene:Rn.233743 STRING:10116.ENSRNOP00000057069 Ensembl:ENSRNOT00000075159 GeneID:619577 KEGG:rno:619577 InParanoid:Q3ZAU6 NextBio:714669 Genevestigator:Q3ZAU6 Uniprot:Q3ZAU6)

HSP 1 Score: 46.9802 bits (110), Expect = 5.459e-6
Identity = 21/62 (33.87%), Postives = 38/62 (61.29%), Query Frame = 0

Query:   15 NLWINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            N ++ AD+  ++ +++ Y ++ + +   E+ S D ++  S +CP C   IQK +GCNKM CT
Sbjct:  367 NEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCT 428

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BLAST of EMLSAG00000004225 vs. GO
Match: - (symbol:Rnf14 "ring finger protein 14" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0019787 "small conjugating protein ligase activity" evidence=IEA;ISO] [GO:0032355 "response to estradiol" evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=IEA;ISO] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 RGD:1589576 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0008152 GO:GO:0032355 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 EMBL:CH473974 eggNOG:NOG266709 KO:K11971 OMA:QYFCWLC GeneTree:ENSGT00740000115249 CTD:9604 HOVERGEN:HBG057296 OrthoDB:EOG7BGHKF EMBL:AABR06094692 EMBL:AABR06094695 EMBL:AABR06094693 EMBL:AABR06094694 EMBL:BC103648 RefSeq:NP_001030167.1 RefSeq:XP_006254698.1 RefSeq:XP_006254699.1 RefSeq:XP_006254700.1 UniGene:Rn.115357 UniGene:Rn.233743 STRING:10116.ENSRNOP00000057069 Ensembl:ENSRNOT00000075159 GeneID:619577 KEGG:rno:619577 InParanoid:Q3ZAU6 NextBio:714669 Genevestigator:Q3ZAU6 Uniprot:Q3ZAU6)

HSP 1 Score: 46.9802 bits (110), Expect = 5.459e-6
Identity = 21/62 (33.87%), Postives = 38/62 (61.29%), Query Frame = 0

Query:   15 NLWINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            N ++ AD+  ++ +++ Y ++ + +   E+ S D ++  S +CP C   IQK +GCNKM CT
Sbjct:  367 NEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCT 428

[Close]

BLAST of EMLSAG00000004225 vs. GO
Match: - (symbol:RNF14 "E3 ubiquitin-protein ligase RNF14" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR002867 Pfam:PF01485 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 EMBL:AC005740 HGNC:HGNC:10058 ChiTaRS:RNF14 ProteinModelPortal:E7EP22 SMR:E7EP22 Ensembl:ENST00000512565 NextBio:35499686 ArrayExpress:E7EP22 Bgee:E7EP22 Uniprot:E7EP22)

HSP 1 Score: 43.8986 bits (102), Expect = 9.577e-6
Identity = 19/62 (30.65%), Postives = 37/62 (59.68%), Query Frame = 0

Query:   15 NLWINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            N ++ AD+  ++ + + Y ++ + +   E+ S + ++  S +CP C   I+K +GCNKM CT
Sbjct:   59 NEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCT 120

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BLAST of EMLSAG00000004225 vs. GO
Match: - (symbol:RNF14 "cDNA FLJ58064, highly similar to RING finger protein 14" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR002867 Pfam:PF01485 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 EMBL:AC005740 UniGene:Hs.483616 HGNC:HGNC:10058 ChiTaRS:RNF14 HOVERGEN:HBG105974 EMBL:AK295965 ProteinModelPortal:B7Z3J5 SMR:B7Z3J5 Ensembl:ENST00000540015 UCSC:uc011dbh.2 HOGENOM:HOG000169202 NextBio:35479257 ArrayExpress:B7Z3J5 Uniprot:B7Z3J5)

HSP 1 Score: 43.8986 bits (102), Expect = 1.294e-5
Identity = 19/62 (30.65%), Postives = 37/62 (59.68%), Query Frame = 0

Query:   15 NLWINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            N ++ AD+  ++ + + Y ++ + +   E+ S + ++  S +CP C   I+K +GCNKM CT
Sbjct:   59 NEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCT 120

[Close]

BLAST of EMLSAG00000004225 vs. GO
Match: - (symbol:RNF14 "cDNA FLJ58057, highly similar to RING finger protein 14" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50908 SMART:SM00591 SMART:SM00647 GO:GO:0005737 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 EMBL:AC005740 KO:K11971 UniGene:Hs.483616 GeneID:9604 KEGG:hsa:9604 CTD:9604 HGNC:HGNC:10058 ChiTaRS:RNF14 EMBL:AK294262 RefSeq:XP_005268599.1 RefSeq:XP_005268600.1 ProteinModelPortal:B7Z229 SMR:B7Z229 Ensembl:ENST00000394515 UCSC:uc011dbg.2 HOVERGEN:HBG105974 NextBio:35478890 ArrayExpress:B7Z229 Uniprot:B7Z229)

HSP 1 Score: 44.669 bits (104), Expect = 1.889e-5
Identity = 19/62 (30.65%), Postives = 37/62 (59.68%), Query Frame = 0

Query:   15 NLWINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            N ++ AD+  ++ + + Y ++ + +   E+ S + ++  S +CP C   I+K +GCNKM CT
Sbjct:  186 NEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCT 247

[Close]

BLAST of EMLSAG00000004225 vs. GO
Match: - (symbol:RNF14 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019787 "small conjugating protein ligase activity" evidence=IEA] [GO:0032355 "response to estradiol" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=IEA] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0008152 GO:GO:0032355 GO:GO:0008270 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 KO:K11971 OMA:QYFCWLC GeneTree:ENSGT00740000115249 CTD:9604 TreeFam:TF314401 OrthoDB:EOG7BGHKF EMBL:FP102264 RefSeq:XP_003124055.1 RefSeq:XP_003124056.1 RefSeq:XP_005661830.1 RefSeq:XP_005661831.1 UniGene:Ssc.5933 Ensembl:ENSSSCT00000015732 GeneID:100512591 KEGG:ssc:100512591 Uniprot:F1RM50)

HSP 1 Score: 45.0542 bits (105), Expect = 2.259e-5
Identity = 19/62 (30.65%), Postives = 38/62 (61.29%), Query Frame = 0

Query:   15 NLWINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            N ++ AD+  ++ +++ Y ++ + +   E+ S + ++  S +CP C   I+K +GCNKM CT
Sbjct:  362 NEYLQADETNKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCT 423

[Close]

BLAST of EMLSAG00000004225 vs. GO
Match: - (symbol:RNF14 "E3 ubiquitin-protein ligase RNF14" species:9606 "Homo sapiens" [GO:0003713 "transcription coactivator activity" evidence=NAS;TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IDA] [GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA;IEP] [GO:0019787 "small conjugating protein ligase activity" evidence=IDA] [GO:0030521 "androgen receptor signaling pathway" evidence=NAS] [GO:0032355 "response to estradiol" evidence=IDA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IDA;NAS] [GO:0050681 "androgen receptor binding" evidence=IPI] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=IDA] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0030521 EMBL:CH471062 GO:GO:0032355 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016567 GO:GO:0003713 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 EMBL:AC005740 eggNOG:NOG266709 KO:K11971 OMA:QYFCWLC EMBL:AB022663 EMBL:AF060544 EMBL:AK023884 EMBL:AK057868 EMBL:CR456702 EMBL:BC126185 EMBL:BC144061 EMBL:AB015333 RefSeq:NP_001188294.1 RefSeq:NP_004281.1 RefSeq:NP_899645.1 RefSeq:NP_899646.1 RefSeq:NP_899647.1 RefSeq:NP_899648.1 RefSeq:XP_005268593.1 RefSeq:XP_005268594.1 RefSeq:XP_005268595.1 RefSeq:XP_005268596.1 RefSeq:XP_005268597.1 RefSeq:XP_005268598.1 UniGene:Hs.483616 ProteinModelPortal:Q9UBS8 SMR:Q9UBS8 BioGrid:114968 IntAct:Q9UBS8 MINT:MINT-1187964 STRING:9606.ENSP00000324956 PhosphoSite:Q9UBS8 DMDM:17380293 PaxDb:Q9UBS8 PRIDE:Q9UBS8 DNASU:9604 Ensembl:ENST00000347642 Ensembl:ENST00000356143 Ensembl:ENST00000394514 Ensembl:ENST00000394519 Ensembl:ENST00000394520 GeneID:9604 KEGG:hsa:9604 UCSC:uc003lly.3 CTD:9604 GeneCards:GC05P141358 HGNC:HGNC:10058 HPA:HPA008716 MIM:605675 neXtProt:NX_Q9UBS8 PharmGKB:PA34423 HOVERGEN:HBG057296 InParanoid:Q9UBS8 PhylomeDB:Q9UBS8 TreeFam:TF314401 ChiTaRS:RNF14 GeneWiki:RNF14 GenomeRNAi:9604 NextBio:36027 PRO:PR:Q9UBS8 ArrayExpress:Q9UBS8 Bgee:Q9UBS8 CleanEx:HS_RNF14 Genevestigator:Q9UBS8 Uniprot:Q9UBS8)

HSP 1 Score: 44.669 bits (104), Expect = 3.127e-5
Identity = 19/62 (30.65%), Postives = 37/62 (59.68%), Query Frame = 0

Query:   15 NLWINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            N ++ AD+  ++ + + Y ++ + +   E+ S + ++  S +CP C   I+K +GCNKM CT
Sbjct:  362 NEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCT 423

[Close]

BLAST of EMLSAG00000004225 vs. GO
Match: - (symbol:RNF14 "Ring finger protein 14" species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019787 "small conjugating protein ligase activity" evidence=IEA] [GO:0032355 "response to estradiol" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=IEA] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0008152 GO:GO:0032355 GO:GO:0008270 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 eggNOG:NOG266709 KO:K11971 OMA:QYFCWLC GeneTree:ENSGT00740000115249 CTD:9604 HOVERGEN:HBG057296 TreeFam:TF314401 HOGENOM:HOG000237334 OrthoDB:EOG7BGHKF EMBL:DAAA02020447 EMBL:BC133406 RefSeq:NP_001075009.1 RefSeq:XP_005209531.1 RefSeq:XP_005209532.1 RefSeq:XP_005209533.1 RefSeq:XP_005209534.1 RefSeq:XP_005209535.1 RefSeq:XP_005209536.1 RefSeq:XP_005209537.1 UniGene:Bt.6818 STRING:9913.ENSBTAP00000006908 Ensembl:ENSBTAT00000006908 GeneID:540274 KEGG:bta:540274 InParanoid:A2VDU5 NextBio:20878533 Uniprot:A2VDU5)

HSP 1 Score: 43.8986 bits (102), Expect = 5.553e-5
Identity = 19/62 (30.65%), Postives = 38/62 (61.29%), Query Frame = 0

Query:   15 NLWINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            N ++ AD+  ++ +++ Y ++ + +   E+ S + ++  S +CP C   I+K +GCNKM CT
Sbjct:  362 NEYLQADEANKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCT 423

[Close]

BLAST of EMLSAG00000004225 vs. C. finmarchicus
Match: gi|592927904|gb|GAXK01030581.1| (TSA: Calanus finmarchicus comp116313_c3_seq2 transcribed RNA sequence)

HSP 1 Score: 40.817 bits (94), Expect = 1.965e-4
Identity = 20/59 (33.90%), Postives = 32/59 (54.24%), Query Frame = 0

Query:   17 WINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFC 75
            + N+  +E+  ++K Y +K L      + S D +   +  CP C A I+K EGCNK+ C
Sbjct: 2171 YNNSTGDEKTFLEKRYGKKQLATMSATLASEDYMASHARQCPHCNAPIEKNEGCNKITC 2347

[Close]

BLAST of EMLSAG00000004225 vs. C. finmarchicus
Match: gi|592927905|gb|GAXK01030580.1| (TSA: Calanus finmarchicus comp116313_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 40.817 bits (94), Expect = 1.967e-4
Identity = 20/59 (33.90%), Postives = 32/59 (54.24%), Query Frame = 0

Query:   17 WINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFC 75
            + N+  +E+  ++K Y +K L      + S D +   +  CP C A I+K EGCNK+ C
Sbjct: 2183 YNNSTGDEKTFLEKRYGKKQLATMSATLASEDYMASHARQCPHCNAPIEKNEGCNKITC 2359

[Close]

BLAST of EMLSAG00000004225 vs. C. finmarchicus
Match: gi|592912685|gb|GAXK01045690.1| (TSA: Calanus finmarchicus comp995558_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.4906 bits (62), Expect = 1.884e+0
Identity = 10/20 (50.00%), Postives = 12/20 (60.00%), Query Frame = 0

Query:   57 CPICLAAIQKTEGCNKMFCT 76
            CP C   I+K  GC+ M CT
Sbjct:  444 CPSCFVPIEKNGGCHHMSCT 503

[Close]

BLAST of EMLSAG00000004225 vs. C. finmarchicus
Match: gi|592784839|gb|GAXK01169729.1| (TSA: Calanus finmarchicus comp551_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 28.4906 bits (62), Expect = 1.886e+0
Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 0

Query:   57 CPICLAAIQKTEGCNKMFC 75
            CP C A I+K  GCN M C
Sbjct:  988 CPKCGATIEKDGGCNHMIC 1044

[Close]

BLAST of EMLSAG00000004225 vs. C. finmarchicus
Match: gi|592784840|gb|GAXK01169728.1| (TSA: Calanus finmarchicus comp551_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.4906 bits (62), Expect = 1.886e+0
Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 0

Query:   57 CPICLAAIQKTEGCNKMFC 75
            CP C A I+K  GCN M C
Sbjct:  988 CPKCGATIEKDGGCNHMIC 1044

[Close]

BLAST of EMLSAG00000004225 vs. C. finmarchicus
Match: gi|592762012|gb|GAXK01192401.1| (TSA: Calanus finmarchicus comp523312_c2_seq9 transcribed RNA sequence)

HSP 1 Score: 28.1054 bits (61), Expect = 2.843e+0
Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 0

Query:   48 DLIKDISTNCPICLAAIQKTEGCNKMFC 75
            DL ++I   CP C   I++ EGC +M C
Sbjct:  309 DLEENIK-KCPQCQVPIERNEGCAQMMC 389

[Close]

BLAST of EMLSAG00000004225 vs. C. finmarchicus
Match: gi|592768963|gb|GAXK01185605.1| (TSA: Calanus finmarchicus comp45492_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.1054 bits (61), Expect = 3.199e+0
Identity = 16/50 (32.00%), Postives = 27/50 (54.00%), Query Frame = 0

Query:   23 EERKKMKKIYSQKFLLE---TQNEILSHDLIKDISTNCPICLAAIQKTEG 69
            EERKK + + S++  +E   T+N + + + I +    CPIC   +   EG
Sbjct: 4340 EERKKSRVLRSRQQSMENLDTENRMANKEDILEEDALCPICQDEMHDEEG 4489

[Close]

BLAST of EMLSAG00000004225 vs. C. finmarchicus
Match: gi|592762014|gb|GAXK01192399.1| (TSA: Calanus finmarchicus comp523312_c2_seq7 transcribed RNA sequence)

HSP 1 Score: 27.335 bits (59), Expect = 4.800e+0
Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 0

Query:   48 DLIKDISTNCPICLAAIQKTEGCNKMFC 75
            DL ++I   CP C   I++ EGC +M C
Sbjct:  309 DLEENIK-KCPQCQVPIERNEGCAQMMC 389

[Close]

BLAST of EMLSAG00000004225 vs. C. finmarchicus
Match: gi|592762015|gb|GAXK01192398.1| (TSA: Calanus finmarchicus comp523312_c2_seq6 transcribed RNA sequence)

HSP 1 Score: 27.335 bits (59), Expect = 4.821e+0
Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 0

Query:   48 DLIKDISTNCPICLAAIQKTEGCNKMFC 75
            DL ++I   CP C   I++ EGC +M C
Sbjct:  309 DLEENIK-KCPQCQVPIERNEGCAQMMC 389

[Close]

BLAST of EMLSAG00000004225 vs. C. finmarchicus
Match: gi|592762016|gb|GAXK01192397.1| (TSA: Calanus finmarchicus comp523312_c2_seq5 transcribed RNA sequence)

HSP 1 Score: 27.335 bits (59), Expect = 4.867e+0
Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 0

Query:   48 DLIKDISTNCPICLAAIQKTEGCNKMFC 75
            DL ++I   CP C   I++ EGC +M C
Sbjct:  309 DLEENIK-KCPQCQVPIERNEGCAQMMC 389

[Close]

BLAST of EMLSAG00000004225 vs. L. salmonis peptides
Match: EMLSAP00000004225 (pep:novel supercontig:LSalAtl2s:LSalAtl2s222:1029529:1029812:-1 gene:EMLSAG00000004225 transcript:EMLSAT00000004225 description:"snap_masked-LSalAtl2s222-processed-gene-10.15")

HSP 1 Score: 160.229 bits (404), Expect = 1.875e-52
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0

Query:    1 MDSILARFHAKNNENLWINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCTW 77
            MDSILARFHAKNNENLWINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCTW
Sbjct:    1 MDSILARFHAKNNENLWINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCTW 77

[Close]

BLAST of EMLSAG00000004225 vs. L. salmonis peptides
Match: EMLSAP00000004223 (pep:novel supercontig:LSalAtl2s:LSalAtl2s222:1015290:1022052:-1 gene:EMLSAG00000004223 transcript:EMLSAT00000004223 description:"augustus_masked-LSalAtl2s222-processed-gene-10.2")

HSP 1 Score: 109.768 bits (273), Expect = 4.295e-30
Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = 0

Query:    8 FHAKNNENL---WINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            FH +    L   + NADDEERKKM+KIYSQKFLLE+QNEILSHDLIKDI TNCP C AAIQKTEGCN MFCT
Sbjct:  332 FHLQXQRELMDKYNNADDEERKKMEKIYSQKFLLESQNEILSHDLIKDICTNCPNCFAAIQKTEGCNIMFCT 403

[Close]

BLAST of EMLSAG00000004225 vs. L. salmonis peptides
Match: EMLSAP00000004226 (pep:novel supercontig:LSalAtl2s:LSalAtl2s222:1043554:1044146:-1 gene:EMLSAG00000004226 transcript:EMLSAT00000004226 description:"maker-LSalAtl2s222-augustus-gene-10.33")

HSP 1 Score: 53.5286 bits (127), Expect = 9.889e-11
Identity = 29/55 (52.73%), Postives = 36/55 (65.45%), Query Frame = 0

Query:   22 DEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            DEE KK       K L ++QNE L  DLI+ IS +CP CL++IQK+ GCN M CT
Sbjct:   69 DEESKK-------KLLEDSQNETLCLDLIEKISRHCPKCLSSIQKSAGCNSMVCT 116

[Close]

BLAST of EMLSAG00000004225 vs. Select Arthropod Genomes
Match: gb|EEC05346.1| (RING finger protein, putative, partial [Ixodes scapularis])

HSP 1 Score: 51.6026 bits (122), Expect = 1.333e-8
Identity = 22/59 (37.29%), Postives = 37/59 (62.71%), Query Frame = 0

Query:   17 WINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFC 75
            ++N    E+++M+K Y ++ L    +E LS D +++ S  CP C  +I+K +GCNKM C
Sbjct:  278 YLNGSAAEKRQMEKRYGRRTLQLVVDESLSQDWMQEHSKKCPHCAVSIEKQDGCNKMTC 336

[Close]

BLAST of EMLSAG00000004225 vs. Select Arthropod Genomes
Match: EFX69743.1 (hypothetical protein DAPPUDRAFT_217662 [Daphnia pulex])

HSP 1 Score: 50.8322 bits (120), Expect = 2.818e-8
Identity = 26/60 (43.33%), Postives = 34/60 (56.67%), Query Frame = 0

Query:   17 WINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFCT 76
            +IN DD  R+ M+K Y +K L    N+I +   I   S  CP C A I+K +GCNKM C 
Sbjct:  358 YINGDDSTRESMEKRYGKKQLKSMVNDIQAETWIGQNSKPCPHCNAPIEKKDGCNKMSCP 417

[Close]

BLAST of EMLSAG00000004225 vs. Select Arthropod Genomes
Match: gb|KFM57360.1| (E3 ubiquitin-protein ligase RNF14, partial [Stegodyphus mimosarum])

HSP 1 Score: 46.9802 bits (110), Expect = 6.939e-7
Identity = 21/59 (35.59%), Postives = 35/59 (59.32%), Query Frame = 0

Query:   17 WINADDEERKKMKKIYSQKFLLETQNEILSHDLIKDISTNCPICLAAIQKTEGCNKMFC 75
            ++  D+  R++++K + ++ +     + LS   I   S  CP C A+I+KTEGCNKM C
Sbjct:  402 YLTGDNARREELEKRHGKRVVRSLVEDTLSAKWIHSYSKKCPHCGASIEKTEGCNKMTC 460

The following BLAST results are available for this feature:

BLAST of EMLSAG00000004225 vs. GO
BLAST of EMLSAG00000004225 vs. C. finmarchicus
BLAST of EMLSAG00000004225 vs. L. salmonis peptides
BLAST of EMLSAG00000004225 vs. SwissProt
BLAST of EMLSAG00000004225 vs. Select Arthropod Genomes
BLAST of EMLSAG00000004225 vs. nr
BLAST of EMLSAG00000004225 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000004225 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 14


Match Name	E-value	Identity	Description
-	7.470e-7	34.25	symbol:CELE_F56D2.5 "Protein F56D2.5" species:6239...	[more]
-	4.961e-6	33.87	symbol:Rnf14 "ring finger protein 14" species:1009...	[more]
-	5.459e-6	33.87	symbol:Rnf14 "Rnf14 protein" species:10116 "Rattus...	[more]
-	5.459e-6	33.87	symbol:Rnf14 "ring finger protein 14" species:1011...	[more]
-	9.577e-6	30.65	symbol:RNF14 "E3 ubiquitin-protein ligase RNF14" s...	[more]
-	1.294e-5	30.65	symbol:RNF14 "cDNA FLJ58064, highly similar to RIN...	[more]
-	1.889e-5	30.65	symbol:RNF14 "cDNA FLJ58057, highly similar to RIN...	[more]
-	2.259e-5	30.65	symbol:RNF14 "Uncharacterized protein" species:982...	[more]
-	3.127e-5	30.65	symbol:RNF14 "E3 ubiquitin-protein ligase RNF14" s...	[more]
-	5.553e-5	30.65	symbol:RNF14 "Ring finger protein 14" species:9913...	[more]

Pages

BLAST of EMLSAG00000004225 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 19


Match Name	E-value	Identity	Description
gi\|592927904\|gb\|GAXK01030581.1\|	1.965e-4	33.90	TSA: Calanus finmarchicus comp116313_c3_seq2 trans...	[more]
gi\|592927905\|gb\|GAXK01030580.1\|	1.967e-4	33.90	TSA: Calanus finmarchicus comp116313_c3_seq1 trans...	[more]
gi\|592912685\|gb\|GAXK01045690.1\|	1.884e+0	50.00	TSA: Calanus finmarchicus comp995558_c0_seq1 trans...	[more]
gi\|592784839\|gb\|GAXK01169729.1\|	1.886e+0	57.89	TSA: Calanus finmarchicus comp551_c0_seq2 transcri...	[more]
gi\|592784840\|gb\|GAXK01169728.1\|	1.886e+0	57.89	TSA: Calanus finmarchicus comp551_c0_seq1 transcri...	[more]
gi\|592762012\|gb\|GAXK01192401.1\|	2.843e+0	42.86	TSA: Calanus finmarchicus comp523312_c2_seq9 trans...	[more]
gi\|592768963\|gb\|GAXK01185605.1\|	3.199e+0	32.00	TSA: Calanus finmarchicus comp45492_c0_seq1 transc...	[more]
gi\|592762014\|gb\|GAXK01192399.1\|	4.800e+0	42.86	TSA: Calanus finmarchicus comp523312_c2_seq7 trans...	[more]
gi\|592762015\|gb\|GAXK01192398.1\|	4.821e+0	42.86	TSA: Calanus finmarchicus comp523312_c2_seq6 trans...	[more]
gi\|592762016\|gb\|GAXK01192397.1\|	4.867e+0	42.86	TSA: Calanus finmarchicus comp523312_c2_seq5 trans...	[more]

Pages

BLAST of EMLSAG00000004225 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3


Match Name	E-value	Identity	Description
EMLSAP00000004225	1.875e-52	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s222:10295...	[more]
EMLSAP00000004223	4.295e-30	76.39	pep:novel supercontig:LSalAtl2s:LSalAtl2s222:10152...	[more]
EMLSAP00000004226	9.889e-11	52.73	pep:novel supercontig:LSalAtl2s:LSalAtl2s222:10435...	[more]

BLAST of EMLSAG00000004225 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000004225 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 3


Match Name	E-value	Identity	Description
gb\|EEC05346.1\|	1.333e-8	37.29	RING finger protein, putative, partial [Ixodes sca...	[more]
EFX69743.1	2.818e-8	43.33	hypothetical protein DAPPUDRAFT_217662 [Daphnia pu...	[more]
gb\|KFM57360.1\|	6.939e-7	35.59	E3 ubiquitin-protein ligase RNF14, partial [Stegod...	[more]

BLAST of EMLSAG00000004225 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000004225 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s222	supercontig	LSalAtl2s222:1029529..1029812 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	snap_masked-LSalAtl2s222-processed-gene-10.15
Biotype	protein_coding
Evidence	IEA
Note	Hypothetical protein

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000004225 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000004225	EMLSAT00000004225-700072	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s222:1029529..1029812-

gene from alignment at LSalAtl2s222:1029529..1029812-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000004225-686991 ID=EMLSAG00000004225-686991|Name=EMLSAG00000004225|organism=Lepeophtheirus salmonis|type=gene|length=284bp|location=Sequence derived from alignment at LSalAtl2s222:1029529..1029812- (Lepeophtheirus salmonis)
ATGGACTCAATCCTTGCAAGTAAGTCATTTTGTTATATTTATTTTAATCA
ATTAAATTATTCTTCCAAGGGTTCCACGCGAAAAACAACGAGAACTTATG
GATAAATGCTGATGATGAAGAGCGTAAAAAAATGAAAAAAATATATAGTC
AAAAGTTTTTATTAGAAACTCAAAACGAAATTCTCTCTCATGATTTAATT
AAGGACATATCTACGAATTGCCCAATTTGTTTAGCGGCAATCCAAAAGAC
TGAAGGATGTAACAAAATGTTTTGCACTTGGTGA

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