EMLSAG00000004227, EMLSAG00000004227-686993 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000004227 vs. GO
Match: - (symbol:Rnf14 "Rnf14 protein" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019787 "small conjugating protein ligase activity" evidence=IEA] [GO:0032355 "response to estradiol" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=IEA] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 RGD:1589576 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0008152 GO:GO:0032355 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 EMBL:CH473974 eggNOG:NOG266709 KO:K11971 OMA:QYFCWLC GeneTree:ENSGT00740000115249 CTD:9604 HOVERGEN:HBG057296 OrthoDB:EOG7BGHKF EMBL:AABR06094692 EMBL:AABR06094695 EMBL:AABR06094693 EMBL:AABR06094694 EMBL:BC103648 RefSeq:NP_001030167.1 RefSeq:XP_006254698.1 RefSeq:XP_006254699.1 RefSeq:XP_006254700.1 UniGene:Rn.115357 UniGene:Rn.233743 STRING:10116.ENSRNOP00000057069 Ensembl:ENSRNOT00000075159 GeneID:619577 KEGG:rno:619577 InParanoid:Q3ZAU6 NextBio:714669 Genevestigator:Q3ZAU6 Uniprot:Q3ZAU6) HSP 1 Score: 56.6102 bits (135), Expect = 1.426e-8 Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 92 CSWLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELV 150
C L S + + C HVYCK C++ YFE +I++G + CP +CS A P Q+KELV
Sbjct: 230 CEKLGSDCMYFLECRHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCSSVATPGQVKELV 288
BLAST of EMLSAG00000004227 vs. GO
Match: - (symbol:Rnf14 "ring finger protein 14" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0019787 "small conjugating protein ligase activity" evidence=IEA;ISO] [GO:0032355 "response to estradiol" evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=IEA;ISO] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 RGD:1589576 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0008152 GO:GO:0032355 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 EMBL:CH473974 eggNOG:NOG266709 KO:K11971 OMA:QYFCWLC GeneTree:ENSGT00740000115249 CTD:9604 HOVERGEN:HBG057296 OrthoDB:EOG7BGHKF EMBL:AABR06094692 EMBL:AABR06094695 EMBL:AABR06094693 EMBL:AABR06094694 EMBL:BC103648 RefSeq:NP_001030167.1 RefSeq:XP_006254698.1 RefSeq:XP_006254699.1 RefSeq:XP_006254700.1 UniGene:Rn.115357 UniGene:Rn.233743 STRING:10116.ENSRNOP00000057069 Ensembl:ENSRNOT00000075159 GeneID:619577 KEGG:rno:619577 InParanoid:Q3ZAU6 NextBio:714669 Genevestigator:Q3ZAU6 Uniprot:Q3ZAU6) HSP 1 Score: 56.6102 bits (135), Expect = 1.426e-8 Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 92 CSWLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELV 150
C L S + + C HVYCK C++ YFE +I++G + CP +CS A P Q+KELV
Sbjct: 230 CEKLGSDCMYFLECRHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCSSVATPGQVKELV 288
BLAST of EMLSAG00000004227 vs. GO
Match: - (symbol:Rnf14 "ring finger protein 14" species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA] [GO:0019787 "small conjugating protein ligase activity" evidence=ISO;ISS] [GO:0032355 "response to estradiol" evidence=ISO] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=ISO] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=ISO] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 MGI:MGI:1929668 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CH466528 GO:GO:0032355 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0050681 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 eggNOG:NOG266709 KO:K11971 OMA:QYFCWLC GeneTree:ENSGT00740000115249 CTD:9604 HOVERGEN:HBG057296 TreeFam:TF314401 EMBL:AF249667 EMBL:AF249668 EMBL:AK011316 EMBL:AK009783 EMBL:AK010162 EMBL:BC054841 EMBL:BC094250 RefSeq:NP_001158093.1 RefSeq:NP_001158094.1 RefSeq:NP_064396.2 RefSeq:XP_006526184.1 RefSeq:XP_006526185.1 RefSeq:XP_006526186.1 RefSeq:XP_006526187.1 RefSeq:XP_006526188.1 RefSeq:XP_006526189.1 RefSeq:XP_006526190.1 UniGene:Mm.228903 ProteinModelPortal:Q9JI90 SMR:Q9JI90 BioGrid:208150 IntAct:Q9JI90 PhosphoSite:Q9JI90 PaxDb:Q9JI90 PRIDE:Q9JI90 Ensembl:ENSMUST00000072376 Ensembl:ENSMUST00000171461 GeneID:56736 KEGG:mmu:56736 UCSC:uc008ese.2 HOGENOM:HOG000237334 InParanoid:Q7TPR0 OrthoDB:EOG7BGHKF NextBio:313224 PRO:PR:Q9JI90 ArrayExpress:Q9JI90 Bgee:Q9JI90 CleanEx:MM_RNF14 Genevestigator:Q9JI90 Uniprot:Q9JI90) HSP 1 Score: 55.0694 bits (131), Expect = 3.966e-8 Identity = 35/130 (26.92%), Postives = 62/130 (47.69%), Query Frame = 0
Query: 26 EKHSKGQISNTIELN--GSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLT---CSWLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELV 150
++ + Q S++ EL G+ + T++ + + + L + +L+F + F + C L S + + C HVYCK C++ YFE +I++G + CP +C A P Q+KELV
Sbjct: 155 QRRATAQASSSTELGVGGAAAADVDQEETVDERAVQDVESLSSLIQEILDFNQARQTKCFNSKLFLCSICFCEKLGSDCMYFLECKHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCPSVATPGQVKELV 284
BLAST of EMLSAG00000004227 vs. GO
Match: - (symbol:RNF14 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019787 "small conjugating protein ligase activity" evidence=IEA] [GO:0032355 "response to estradiol" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=IEA] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0008152 GO:GO:0032355 GO:GO:0008270 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 KO:K11971 OMA:QYFCWLC GeneTree:ENSGT00740000115249 CTD:9604 TreeFam:TF314401 OrthoDB:EOG7BGHKF EMBL:FP102264 RefSeq:XP_003124055.1 RefSeq:XP_003124056.1 RefSeq:XP_005661830.1 RefSeq:XP_005661831.1 UniGene:Ssc.5933 Ensembl:ENSSSCT00000015732 GeneID:100512591 KEGG:ssc:100512591 Uniprot:F1RM50) HSP 1 Score: 54.6842 bits (130), Expect = 5.318e-8 Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 92 CSWLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELV 150
C L S+ + + C HVYCK C++ YFE +I++G + CP +C A P Q+KELV
Sbjct: 225 CEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELV 283
BLAST of EMLSAG00000004227 vs. GO
Match: - (symbol:RNF14 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019787 "small conjugating protein ligase activity" evidence=IEA] [GO:0032355 "response to estradiol" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=IEA] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0008152 GO:GO:0032355 GO:GO:0008270 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 KO:K11971 OMA:QYFCWLC GeneTree:ENSGT00740000115249 CTD:9604 TreeFam:TF314401 OrthoDB:EOG7BGHKF EMBL:AAEX03001403 RefSeq:XP_005617372.1 RefSeq:XP_005617373.1 RefSeq:XP_005617374.1 RefSeq:XP_005617375.1 RefSeq:XP_005617376.1 RefSeq:XP_005617377.1 RefSeq:XP_849246.1 ProteinModelPortal:E2QX80 Ensembl:ENSCAFT00000035645 GeneID:478042 KEGG:cfa:478042 NextBio:20853425 Uniprot:E2QX80) HSP 1 Score: 54.6842 bits (130), Expect = 5.318e-8 Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 92 CSWLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELV 150
C L S+ + + C HVYCK C++ YFE +I++G + CP +C A P Q+KELV
Sbjct: 225 CEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELV 283
BLAST of EMLSAG00000004227 vs. GO
Match: - (symbol:RNF14 "Ring finger protein 14" species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019787 "small conjugating protein ligase activity" evidence=IEA] [GO:0032355 "response to estradiol" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=IEA] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0008152 GO:GO:0032355 GO:GO:0008270 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 eggNOG:NOG266709 KO:K11971 OMA:QYFCWLC GeneTree:ENSGT00740000115249 CTD:9604 HOVERGEN:HBG057296 TreeFam:TF314401 HOGENOM:HOG000237334 OrthoDB:EOG7BGHKF EMBL:DAAA02020447 EMBL:BC133406 RefSeq:NP_001075009.1 RefSeq:XP_005209531.1 RefSeq:XP_005209532.1 RefSeq:XP_005209533.1 RefSeq:XP_005209534.1 RefSeq:XP_005209535.1 RefSeq:XP_005209536.1 RefSeq:XP_005209537.1 UniGene:Bt.6818 STRING:9913.ENSBTAP00000006908 Ensembl:ENSBTAT00000006908 GeneID:540274 KEGG:bta:540274 InParanoid:A2VDU5 NextBio:20878533 Uniprot:A2VDU5) HSP 1 Score: 54.6842 bits (130), Expect = 5.367e-8 Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 92 CSWLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELV 150
C L S+ + + C HVYCK C++ YFE +I++G + CP +C A P Q+KELV
Sbjct: 225 CEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELV 283
BLAST of EMLSAG00000004227 vs. GO
Match: - (symbol:RNF14 "E3 ubiquitin-protein ligase RNF14" species:9606 "Homo sapiens" [GO:0003713 "transcription coactivator activity" evidence=NAS;TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IDA] [GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA;IEP] [GO:0019787 "small conjugating protein ligase activity" evidence=IDA] [GO:0030521 "androgen receptor signaling pathway" evidence=NAS] [GO:0032355 "response to estradiol" evidence=IDA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IDA;NAS] [GO:0050681 "androgen receptor binding" evidence=IPI] [GO:0060765 "regulation of androgen receptor signaling pathway" evidence=IDA] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0030521 EMBL:CH471062 GO:GO:0032355 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016567 GO:GO:0003713 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0060765 InterPro:IPR017907 GO:GO:0019787 EMBL:AC005740 eggNOG:NOG266709 KO:K11971 OMA:QYFCWLC EMBL:AB022663 EMBL:AF060544 EMBL:AK023884 EMBL:AK057868 EMBL:CR456702 EMBL:BC126185 EMBL:BC144061 EMBL:AB015333 RefSeq:NP_001188294.1 RefSeq:NP_004281.1 RefSeq:NP_899645.1 RefSeq:NP_899646.1 RefSeq:NP_899647.1 RefSeq:NP_899648.1 RefSeq:XP_005268593.1 RefSeq:XP_005268594.1 RefSeq:XP_005268595.1 RefSeq:XP_005268596.1 RefSeq:XP_005268597.1 RefSeq:XP_005268598.1 UniGene:Hs.483616 ProteinModelPortal:Q9UBS8 SMR:Q9UBS8 BioGrid:114968 IntAct:Q9UBS8 MINT:MINT-1187964 STRING:9606.ENSP00000324956 PhosphoSite:Q9UBS8 DMDM:17380293 PaxDb:Q9UBS8 PRIDE:Q9UBS8 DNASU:9604 Ensembl:ENST00000347642 Ensembl:ENST00000356143 Ensembl:ENST00000394514 Ensembl:ENST00000394519 Ensembl:ENST00000394520 GeneID:9604 KEGG:hsa:9604 UCSC:uc003lly.3 CTD:9604 GeneCards:GC05P141358 HGNC:HGNC:10058 HPA:HPA008716 MIM:605675 neXtProt:NX_Q9UBS8 PharmGKB:PA34423 HOVERGEN:HBG057296 InParanoid:Q9UBS8 PhylomeDB:Q9UBS8 TreeFam:TF314401 ChiTaRS:RNF14 GeneWiki:RNF14 GenomeRNAi:9604 NextBio:36027 PRO:PR:Q9UBS8 ArrayExpress:Q9UBS8 Bgee:Q9UBS8 CleanEx:HS_RNF14 Genevestigator:Q9UBS8 Uniprot:Q9UBS8) HSP 1 Score: 54.6842 bits (130), Expect = 5.615e-8 Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 92 CSWLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELV 150
C L S+ + + C HVYCK C++ YFE +I++G + CP +C A P Q+KELV
Sbjct: 225 CEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELV 283
BLAST of EMLSAG00000004227 vs. GO
Match: - (symbol:rnf14 "ring finger protein 14" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591 SMART:SM00647 Prosite:PS00518 ZFIN:ZDB-GENE-040625-65 GO:GO:0008270 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR017907 eggNOG:NOG266709 KO:K11971 CTD:9604 HOVERGEN:HBG057296 HOGENOM:HOG000237334 EMBL:BC071542 RefSeq:NP_001002087.1 UniGene:Dr.132353 ProteinModelPortal:Q6IQ68 STRING:7955.ENSDARP00000017558 GeneID:415177 KEGG:dre:415177 InParanoid:Q6IQ68 NextBio:20818847 Uniprot:Q6IQ68) HSP 1 Score: 53.1434 bits (126), Expect = 1.664e-7 Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 0
Query: 105 CDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSE 152
C+HVYCK C++ YF+ +I++G + CP +C+ A PTQ+K LV E
Sbjct: 222 CEHVYCKACIKEYFQIQIKDGKVQCLNCPEPKCASTATPTQVKLLVGE 269 HSP 2 Score: 46.9802 bits (110), Expect = 1.810e-5 Identity = 23/96 (23.96%), Postives = 49/96 (51.04%), Query Frame = 0
Query: 8 DEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKVINI 103
DE++ L+ I+ ++ F +G+I +EL + + +++ H ++ +PP++L F+ P +YPS S P F ++ WL ++ +
Sbjct: 10 DELLALASIYDEEEFHRAGSAKEGEIHLCLELPPNFKLLVKGQKSAEH-------NISFLPPLVLSFDLPDDYPSTSAPVFTISSKWLTRVQITAL 98
BLAST of EMLSAG00000004227 vs. GO
Match: - (symbol:ankib1b "ankyrin repeat and IBR domain containing 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR002110 InterPro:IPR002867 Pfam:PF01485 PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184 SMART:SM00248 SMART:SM00647 ZFIN:ZDB-GENE-100920-6 GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.40.10 InterPro:IPR013083 OMA:NNPAIKW OrthoDB:EOG7T7GSP TreeFam:TF331104 GeneTree:ENSGT00740000114903 EMBL:BX248082 Ensembl:ENSDART00000112288 Ensembl:ENSDART00000131227 Uniprot:E7EYI2) HSP 1 Score: 50.8322 bits (120), Expect = 1.256e-6 Identity = 20/55 (36.36%), Postives = 32/55 (58.18%), Query Frame = 0
Query: 101 INIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEKTL 155
++I C H +C+ C S+ KIQEG I CP Y+C F+ +P ++ E + K +
Sbjct: 348 VDIPCGHEFCRGCWESFLNLKIQEGEAHNIFCPAYDC-FQLVPVEVIESIVSKEM 401
BLAST of EMLSAG00000004227 vs. GO
Match: - (symbol:Ankib1 "ankyrin repeat and IBR domain containing 1" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR002110 InterPro:IPR002867 Pfam:PF01485 PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184 SMART:SM00248 SMART:SM00647 RGD:1597088 GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11967 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 CTD:54467 OMA:NNPAIKW OrthoDB:EOG7T7GSP TreeFam:TF331104 GeneTree:ENSGT00740000114903 EMBL:AABR06029403 EMBL:AABR06029404 UniGene:Rn.2999 RefSeq:NP_001128253.1 Ensembl:ENSRNOT00000007940 GeneID:368062 KEGG:rno:368062 UCSC:RGD:1597088 NextBio:35573066 ArrayExpress:D4A731 Uniprot:D4A731) HSP 1 Score: 50.0618 bits (118), Expect = 2.142e-6 Identity = 21/55 (38.18%), Postives = 31/55 (56.36%), Query Frame = 0
Query: 101 INIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEKTL 155
+++ C H +C+ C S+ KIQEG I CP YEC F+ +P + E V K +
Sbjct: 348 VDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYEC-FQLVPVDVIESVVSKEM 401
BLAST of EMLSAG00000004227 vs. C. finmarchicus
Match: gi|592927905|gb|GAXK01030580.1| (TSA: Calanus finmarchicus comp116313_c3_seq1 transcribed RNA sequence) HSP 1 Score: 62.7734 bits (151), Expect = 5.941e-11 Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 0
Query: 103 IRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELV 150
+ C+HVYCK CM +YF+ KI G+ S ++CPT++C +ALP Q+ ELV
Sbjct: 1799 VVCNHVYCKDCMANYFKEKISTGAVSSLMCPTFKCDTQALPNQVAELV 1942 HSP 2 Score: 47.7506 bits (112), Expect = 3.929e-6 Identity = 32/97 (32.99%), Postives = 48/97 (49.48%), Query Frame = 0
Query: 2 DLCEQTDEVMVLSEIFGDKLFEFDEKH---SKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWL 95
D EQ DE++ LS I F E KG + + + G+ + I + + N K K ++PP+ LEF PA+YPS + P + +TC WL
Sbjct: 35 DREEQNDELLALSGILDTTAFSHSESQCGGHKGVLEVVVRVPGAGL-IEIVRG--NGKPNFTVK---YLPPVKLEFSLPADYPSQACPLYCITCPWL 307
BLAST of EMLSAG00000004227 vs. C. finmarchicus
Match: gi|592927904|gb|GAXK01030581.1| (TSA: Calanus finmarchicus comp116313_c3_seq2 transcribed RNA sequence) HSP 1 Score: 62.7734 bits (151), Expect = 6.260e-11 Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 0
Query: 103 IRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELV 150
+ C+HVYCK CM +YF+ KI G+ S ++CPT++C +ALP Q+ ELV
Sbjct: 1787 VVCNHVYCKDCMANYFKEKISTGAVSSLMCPTFKCDTQALPNQVAELV 1930 HSP 2 Score: 47.7506 bits (112), Expect = 3.926e-6 Identity = 32/97 (32.99%), Postives = 48/97 (49.48%), Query Frame = 0
Query: 2 DLCEQTDEVMVLSEIFGDKLFEFDEKH---SKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWL 95
D EQ DE++ LS I F E KG + + + G+ + I + + N K K ++PP+ LEF PA+YPS + P + +TC WL
Sbjct: 35 DREEQNDELLALSGILDTTAFSHSESQCGGHKGVLEVVVRVPGAGL-IEIVRG--NGKPNFTVK---YLPPVKLEFSLPADYPSQACPLYCITCPWL 307
BLAST of EMLSAG00000004227 vs. C. finmarchicus
Match: gi|592918361|gb|GAXK01040014.1| (TSA: Calanus finmarchicus comp1096235_c0_seq1 transcribed RNA sequence) HSP 1 Score: 46.2098 bits (108), Expect = 1.215e-5 Identity = 23/62 (37.10%), Postives = 34/62 (54.84%), Query Frame = 0
Query: 94 WLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEKTL 155
W +V+ C+H YCK C +Y TKI EG S I+CP + CS +P + EL+ + +
Sbjct: 1056 WKRPTRVMT--CEHNYCKSCWETYLTTKINEGDASHILCPAFGCSI-LVPVDMIELLVSRDV 1232
BLAST of EMLSAG00000004227 vs. C. finmarchicus
Match: gi|592912685|gb|GAXK01045690.1| (TSA: Calanus finmarchicus comp995558_c0_seq1 transcribed RNA sequence) HSP 1 Score: 37.7354 bits (86), Expect = 9.100e-3 Identity = 30/114 (26.32%), Postives = 58/114 (50.88%), Query Frame = 0
Query: 5 EQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKD---LYHIPPILLEFEFPANYPSVSVPKFNLTCSWLN-------SKKVINIRCDHV 108
E DE+ VL I D + D+ S I+ ++L+ +K+GV + + ++ ++D + ++PPI+L P YP S P+F + SW+ ++ +I +R D++
Sbjct: 1515 ELHDELEVLVAIMEDDIKIHDDNIS-ADINIVLKLD-DPLKVGV--SYLEAQMLVKAEDEIMVRYLPPIILRVSLPEGYPEKSPPEFTIDNSWMTDEDKKLITESLIKVRDDNI 1844 HSP 2 Score: 37.3502 bits (85), Expect = 1.481e-2 Identity = 17/49 (34.69%), Postives = 26/49 (53.06%), Query Frame = 0
Query: 105 CDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEK 153
C H +C C+ Y ET I++GS I CP C + + +LVS++
Sbjct: 1149 CSHAFCHSCLGQYCETHIKDGSSRTIDCPDPSCRSKVEIGVVHKLVSKE 1295
BLAST of EMLSAG00000004227 vs. C. finmarchicus
Match: gi|592808821|gb|GAXK01145747.1| (TSA: Calanus finmarchicus comp571820_c0_seq4 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 5.001e-2 Identity = 15/33 (45.45%), Postives = 19/33 (57.58%), Query Frame = 0
Query: 105 CDHVYCKICMRSYFETKIQEGSESGIVCPTYEC 137
C H +C C R Y T+I+ GS S + CP Y C
Sbjct: 87 CGHTFCSQCWRFYTATQIKAGSTS-MTCPAYLC 182
BLAST of EMLSAG00000004227 vs. C. finmarchicus
Match: gi|592808822|gb|GAXK01145746.1| (TSA: Calanus finmarchicus comp571820_c0_seq3 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 5.053e-2 Identity = 15/33 (45.45%), Postives = 19/33 (57.58%), Query Frame = 0
Query: 105 CDHVYCKICMRSYFETKIQEGSESGIVCPTYEC 137
C H +C C R Y T+I+ GS S + CP Y C
Sbjct: 87 CGHTFCSQCWRFYTATQIKAGSTS-MTCPAYLC 182
BLAST of EMLSAG00000004227 vs. C. finmarchicus
Match: gi|592808823|gb|GAXK01145745.1| (TSA: Calanus finmarchicus comp571820_c0_seq2 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 6.920e-2 Identity = 15/33 (45.45%), Postives = 19/33 (57.58%), Query Frame = 0
Query: 105 CDHVYCKICMRSYFETKIQEGSESGIVCPTYEC 137
C H +C C R Y T+I+ GS S + CP Y C
Sbjct: 220 CGHTFCSQCWRFYTATQIRAGSTS-MTCPAYLC 315
BLAST of EMLSAG00000004227 vs. C. finmarchicus
Match: gi|592808824|gb|GAXK01145744.1| (TSA: Calanus finmarchicus comp571820_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 6.980e-2 Identity = 15/33 (45.45%), Postives = 19/33 (57.58%), Query Frame = 0
Query: 105 CDHVYCKICMRSYFETKIQEGSESGIVCPTYEC 137
C H +C C R Y T+I+ GS S + CP Y C
Sbjct: 220 CGHTFCSQCWRFYTATQIRAGSTS-MTCPAYLC 315
BLAST of EMLSAG00000004227 vs. C. finmarchicus
Match: gi|592861219|gb|GAXK01096343.1| (TSA: Calanus finmarchicus comp55730_c3_seq1 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 4.011e-1 Identity = 18/52 (34.62%), Postives = 29/52 (55.77%), Query Frame = 0
Query: 105 CDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEKTLL 156
C H++C +C++ Y +IQEG + CP +C+ P I+ LV E + L
Sbjct: 1065 CHHLFCIVCLQQYVRIEIQEG-RVNLKCP--QCNEILHPNDIEMLVGEDSSL 1211
BLAST of EMLSAG00000004227 vs. C. finmarchicus
Match: gi|592784839|gb|GAXK01169729.1| (TSA: Calanus finmarchicus comp551_c0_seq2 transcribed RNA sequence) HSP 1 Score: 32.7278 bits (73), Expect = 4.394e-1 Identity = 18/53 (33.96%), Postives = 25/53 (47.17%), Query Frame = 0
Query: 82 SVSVPKFNLTCSWLNSKKVINIRCDHVYCKICMRSYFETKI-QEGSESGIVCP 133
+ SV + + C L + + C H+YC C Y TKI EG+ I CP
Sbjct: 499 ASSVVECEICCLSLTKSMMTGLECGHLYCTSCWTEYLTTKIMDEGASQMIECP 657
BLAST of EMLSAG00000004227 vs. L. salmonis peptides
Match: EMLSAP00000004227 (pep:novel supercontig:LSalAtl2s:LSalAtl2s222:1044169:1045182:-1 gene:EMLSAG00000004227 transcript:EMLSAT00000004227 description:"maker-LSalAtl2s222-augustus-gene-10.34") HSP 1 Score: 319.701 bits (818), Expect = 8.645e-113 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query: 1 MDLCEQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEKTLL 156
MDLCEQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEKTLL
Sbjct: 1 MDLCEQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEKTLL 156
BLAST of EMLSAG00000004227 vs. L. salmonis peptides
Match: EMLSAP00000004223 (pep:novel supercontig:LSalAtl2s:LSalAtl2s222:1015290:1022052:-1 gene:EMLSAG00000004223 transcript:EMLSAT00000004223 description:"augustus_masked-LSalAtl2s222-processed-gene-10.2") HSP 1 Score: 170.244 bits (430), Expect = 7.870e-51 Identity = 85/103 (82.52%), Postives = 94/103 (91.26%), Query Frame = 0
Query: 1 MDLCEQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTIN---HKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKV 100
+DLCEQTDEVMVLSEIFG+KLFEFDEKHSKGQISNTIELNGSTIKIGV KR+IN +EILLSKDL HIPPI L FEFPANYPSVS+PKF+L+C WLNSK++
Sbjct: 36 VDLCEQTDEVMVLSEIFGNKLFEFDEKHSKGQISNTIELNGSTIKIGVSKRSINDNHEREILLSKDLDHIPPISLVFEFPANYPSVSMPKFSLSCLWLNSKQI 138 HSP 2 Score: 101.293 bits (251), Expect = 8.686e-26 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
Query: 105 CDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEK 153
CDHVYCKICMRSYFETKIQEGSESGIVCPT+ECS EALPTQIKELVSEK
Sbjct: 237 CDHVYCKICMRSYFETKIQEGSESGIVCPTHECSVEALPTQIKELVSEK 285
BLAST of EMLSAG00000004227 vs. L. salmonis peptides
Match: EMLSAP00000004222 (pep:novel supercontig:LSalAtl2s:LSalAtl2s222:1009525:1011516:-1 gene:EMLSAG00000004222 transcript:EMLSAT00000004222 description:"snap_masked-LSalAtl2s222-processed-gene-10.13") HSP 1 Score: 91.6633 bits (226), Expect = 5.186e-24 Identity = 56/99 (56.57%), Postives = 66/99 (66.67%), Query Frame = 0
Query: 1 MDLCEQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFP-ANYPSVSVPKFNLTCSWLNSK 98
MDL EQ DEVMVL EI+ +KLFEFDEKHSKGQISN IELNGS IKIGV KRTIN K S + +I L P A++ V P NL ++N++
Sbjct: 3 MDLTEQKDEVMVLYEIYRNKLFEFDEKHSKGQISNAIELNGSVIKIGVSKRTINDK---CSTNFCYICGTKLFASNPYAHFSDVRSPCANLLFDFINNE 98
BLAST of EMLSAG00000004227 vs. SwissProt
Match: gi|341941986|sp|Q9JI90.2|RNF14_MOUSE (RecName: Full=E3 ubiquitin-protein ligase RNF14; AltName: Full=Androgen receptor-associated protein 54; AltName: Full=Protein Triad2; AltName: Full=RING finger protein 14) HSP 1 Score: 55.0694 bits (131), Expect = 2.170e-8 Identity = 35/130 (26.92%), Postives = 62/130 (47.69%), Query Frame = 0
Query: 26 EKHSKGQISNTIELN--GSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLT---CSWLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELV 150
++ + Q S++ EL G+ + T++ + + + L + +L+F + F + C L S + + C HVYCK C++ YFE +I++G + CP +C A P Q+KELV
Sbjct: 155 QRRATAQASSSTELGVGGAAAADVDQEETVDERAVQDVESLSSLIQEILDFNQARQTKCFNSKLFLCSICFCEKLGSDCMYFLECKHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCPSVATPGQVKELV 284
BLAST of EMLSAG00000004227 vs. SwissProt
Match: gi|17380293|sp|Q9UBS8.1|RNF14_HUMAN (RecName: Full=E3 ubiquitin-protein ligase RNF14; AltName: Full=Androgen receptor-associated protein 54; AltName: Full=HFB30; AltName: Full=RING finger protein 14; AltName: Full=Triad2 protein) HSP 1 Score: 54.6842 bits (130), Expect = 3.168e-8 Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 92 CSWLNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELV 150
C L S+ + + C HVYCK C++ YFE +I++G + CP +C A P Q+KELV
Sbjct: 225 CEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELV 283
BLAST of EMLSAG00000004227 vs. Select Arthropod Genomes
Match: EFX69743.1 (hypothetical protein DAPPUDRAFT_217662 [Daphnia pulex]) HSP 1 Score: 68.1662 bits (165), Expect = 3.316e-13 Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0
Query: 105 CDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEKTL 155
C+HVYCK CMRSYFE KI EG+ +G+ CP +C+ +A P Q+KELVS T
Sbjct: 232 CNHVYCKECMRSYFEIKIAEGAVNGLHCPEDKCASQASPGQVKELVSADTF 282
BLAST of EMLSAG00000004227 vs. Select Arthropod Genomes
Match: EEB12059.1 (RING finger protein, putative [Pediculus humanus corporis]) HSP 1 Score: 59.6918 bits (143), Expect = 2.456e-10 Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 0
Query: 105 CDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEK 153
C+HV+C C++SYF KI++G I CP +CS EALP+Q+KE+VSE+
Sbjct: 253 CNHVFCISCIKSYFTIKIRDGMVQSIKCPEDKCSTEALPSQVKEIVSEE 301
BLAST of EMLSAG00000004227 vs. Select Arthropod Genomes
Match: XP_006562487.1 (PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Apis mellifera]) HSP 1 Score: 51.6026 bits (122), Expect = 2.047e-7 Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 0
Query: 105 CDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVS 151
C H++CK C+ Y E +I++G+ I CP +C+ EA P IK+LVS
Sbjct: 252 CGHIFCKDCITGYLEVRIKDGNVQNIYCPEEKCTSEATPALIKDLVS 298
BLAST of EMLSAG00000004227 vs. nr
Match: gi|831566580|ref|XP_012733414.1| (PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Fundulus heteroclitus]) HSP 1 Score: 78.5666 bits (192), Expect = 4.183e-14 Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 0
Query: 2 DLCEQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKVINIR 104
DL EQ DE++ L IFG F DE S G+ ++EL +G F + H + + D+ +PP+LL FE P +YPS S P F LTCSWL ++ ++R
Sbjct: 4 DLEEQEDELLALQSIFGSDEFLRDESKSAGECRVSVEL-----PVG-FNVLLKHDQTIRQYDVSFLPPLLLTFELPEDYPSSSPPSFTLTCSWLTQPQLTSLR 100
BLAST of EMLSAG00000004227 vs. nr
Match: gi|961834384|ref|XP_014885605.1| (PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Poecilia latipinna]) HSP 1 Score: 78.1814 bits (191), Expect = 4.356e-14 Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 0
Query: 2 DLCEQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKVINI 103
DL EQ DE++ L IFG + F +E S G+ ++EL F +NH + D+ +PP+LL FE P +YPS + P F LTCSWL ++ ++
Sbjct: 4 DLVEQEDELLALQSIFGSEEFVRNESKSAGEFRVSVELPAG------FTVLLNHGGTIRQYDVSFLPPLLLTFELPGDYPSSAPPSFTLTCSWLTHPQLTSL 99
BLAST of EMLSAG00000004227 vs. nr
Match: gi|47213740|emb|CAF96101.1| (unnamed protein product, partial [Tetraodon nigroviridis]) HSP 1 Score: 72.0182 bits (175), Expect = 3.633e-12 Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = 0
Query: 5 EQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKVINI 103
EQ DE++ L IFG + F E + G+I EL F I EIL ++ +PP+LL F+ P +YPS + P F LTCSWL+ +V N+
Sbjct: 4 EQEDELLALQSIFGPEEFCRKEPNGGGEIRVHAELPAG------FSVAIKEGEILSQYEISFLPPLLLNFDLPEDYPSSAPPSFTLTCSWLSHTQVQNL 96
BLAST of EMLSAG00000004227 vs. nr
Match: gi|1007778217|ref|XP_015826569.1| (PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Nothobranchius furzeri]) HSP 1 Score: 70.0922 bits (170), Expect = 3.662e-11 Identity = 40/101 (39.60%), Postives = 53/101 (52.48%), Query Frame = 0
Query: 1 MDLCEQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHK-EILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKV 100
MD EQ DE++ L IF + F E S G+I ++EL F + H E L D+ +PP+LL FE P +YPS S P F LTCSWL ++
Sbjct: 1 MDQEEQEDELLALQSIFASEEFIRKESKSAGEIRVSVELPED------FTVVLKHGGETLRQYDISFLPPLLLNFELPEDYPSSSPPAFTLTCSWLTHTQL 95
BLAST of EMLSAG00000004227 vs. nr
Match: gi|1079804079|ref|XP_018527073.1| (PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Lates calcarifer]) HSP 1 Score: 68.9366 bits (167), Expect = 7.839e-11 Identity = 35/99 (35.35%), Postives = 53/99 (53.54%), Query Frame = 0
Query: 2 DLCEQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKV 100
D+ EQ DE++ L IF + F E + G+I ++EL F ++ E + ++ +PP+LL FE P +YPS S P F LTCSWL ++
Sbjct: 4 DMEEQEDELLALQSIFDSEEFVRKESNPAGEIRVSVELPAD------FSVSLTEGETVRQYEISFLPPLLLAFELPEDYPSSSPPSFTLTCSWLTHSQL 96
BLAST of EMLSAG00000004227 vs. nr
Match: gi|321458679|gb|EFX69743.1| (hypothetical protein DAPPUDRAFT_217662 [Daphnia pulex]) HSP 1 Score: 68.1662 bits (165), Expect = 1.623e-10 Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0
Query: 105 CDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEKTL 155
C+HVYCK CMRSYFE KI EG+ +G+ CP +C+ +A P Q+KELVS T
Sbjct: 232 CNHVYCKECMRSYFEIKIAEGAVNGLHCPEDKCASQASPGQVKELVSADTF 282
BLAST of EMLSAG00000004227 vs. nr
Match: gi|1108930419|ref|XP_010746985.2| (PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Larimichthys crocea] >gi|808879039|gb|KKF27185.1| E3 ubiquitin-protein ligase RNF14 [Larimichthys crocea]) HSP 1 Score: 67.0106 bits (162), Expect = 4.060e-10 Identity = 36/96 (37.50%), Postives = 51/96 (53.12%), Query Frame = 0
Query: 5 EQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKV 100
EQ DE++ L IF + F +E S G+I +EL F + + L ++ +PP+LL FE PA+YPS S P F LTCSWL ++
Sbjct: 7 EQEDELLALQSIFDPEEFVRNETKSAGEIRVCVELPTD------FTVALREGDSLRQYEISFLPPLLLTFELPADYPSSSPPSFTLTCSWLTDTQL 96
BLAST of EMLSAG00000004227 vs. nr
Match: gi|1070947919|gb|OEL24952.1| (hypothetical protein BAE44_0014030 [Dichanthelium oligosanthes]) HSP 1 Score: 66.6254 bits (161), Expect = 5.616e-10 Identity = 40/163 (24.54%), Postives = 71/163 (43.56%), Query Frame = 0
Query: 9 EVMVLSEIFGDKLFEFD--------------EKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLN----SKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEK 153
+++ L I+GD + FD + Q+ + +G+T + + +L + L H+PPI L P +YPS P F + WL+ S+ I + C+H +C CM SY ++EGS + + P C P ++ L+ ++
Sbjct: 138 QLLALQAIYGDDMVIFDNMDGLRFFQISLHYQLQGDIQVYMNVCTDGTTETVDEDDDEDANDGLLYACSLRHLPPITLTCLLPRSYPSTHAPYFVIAVKWLDEPEVSRNFIQLPCNHSFCVKCMESYCSIHVKEGSVTTLARPDTSCRAPLPPPVLRRLLDKE 300
BLAST of EMLSAG00000004227 vs. nr
Match: gi|657578044|ref|XP_008292878.1| (PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Stegastes partitus]) HSP 1 Score: 66.2402 bits (160), Expect = 7.013e-10 Identity = 36/99 (36.36%), Postives = 52/99 (52.53%), Query Frame = 0
Query: 2 DLCEQTDEVMVLSEIFGDKLFEFDEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKV 100
DL EQ DE++ L IF + F DE G+I ++EL F + + L ++ +PP+LL F+ P +YPS S P F LTCSWL ++
Sbjct: 4 DLEEQEDELLALQSIFDSQEFVRDEPKCAGEIRVSVELPPD------FSVVLKEGDSLRQYEISFLPPLLLTFDLPHDYPSSSPPSFTLTCSWLTHPQL 96
BLAST of EMLSAG00000004227 vs. nr
Match: gi|762089235|ref|XP_011426961.1| (PREDICTED: E3 ubiquitin-protein ligase RNF14-like isoform X1 [Crassostrea gigas]) HSP 1 Score: 65.0846 bits (157), Expect = 1.629e-9 Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 0
Query: 95 LNSKKVINIRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKELVSEKTL 155
L S+ + + CDHVYCK CMR YF +I EG+ G++CP +C +A P Q++ELV+++
Sbjct: 213 LGSQCIKFLDCDHVYCKSCMRDYFNVQINEGNVKGLICPYDKCETQAHPCQVQELVNQEVF 273 HSP 2 Score: 60.8474 bits (146), Expect = 5.360e-8 Identity = 30/98 (30.61%), Postives = 53/98 (54.08%), Query Frame = 0
Query: 5 EQTDEVMVLSEIFGDKLFEF--DEKHSKGQISNTIELNGSTIKIGVFKRTINHKEILLSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKV 100
+Q DE++ LS I+ D + D+ GQ S + + + +T + + L H+PP++L+F+ P +YPS + P+F L+C WLN K++
Sbjct: 17 QQEDELLALSSIYDDTVISLVQDDNDCGGQFSARLHFPENFQLAVITDKTDDEIKPEEFHTLKHLPPLILDFQLPPDYPSDNPPQFTLSCKWLNRKQL 114
BLAST of EMLSAG00000004227 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1319_size48508-processed-gene-0.4 (protein:Tk12532 transcript:snap_masked-scaffold1319_size48508-processed-gene-0.4-mRNA-1 annotation:"hypothetical protein YQE_04067 partial") HSP 1 Score: 49.6766 bits (117), Expect = 6.207e-8 Identity = 30/91 (32.97%), Postives = 42/91 (46.15%), Query Frame = 0
Query: 60 LSKDLYHIPPILLEFEFPANYPSVSVPKFNLTCSWLNSKKVIN--IRCDHVYCKICMRSYFETKIQEGSESGIVCPTYECSFEALPTQIKE 148
+SK L+ P I E F + C L S K ++ + C H +C C + Y TKIQEG+ I CP +EC +P Q+ E
Sbjct: 338 MSKSLHLTPKIHSENSFIVDEELAEEGLLCEICCDLMSPKPVDSDMSCGHRFCTRCWKHYLHTKIQEGNTQSIQCPAFECDI-LVPNQVIE 427 The following BLAST results are available for this feature:
BLAST of EMLSAG00000004227 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000004227 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 22
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BLAST of EMLSAG00000004227 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000004227 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 2
BLAST of EMLSAG00000004227 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 3
BLAST of EMLSAG00000004227 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000004227 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s222:1044169..1045182- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000004227-686993 ID=EMLSAG00000004227-686993|Name=EMLSAG00000004227|organism=Lepeophtheirus salmonis|type=gene|length=1014bp|location=Sequence derived from alignment at LSalAtl2s222:1044169..1045182- (Lepeophtheirus salmonis)back to top Add to Basket
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