EMLSAG00000005022, EMLSAG00000005022-687788 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000005022
Unique Name	EMLSAG00000005022-687788
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000005022 vs. GO
Match: - (symbol:B3GALT4 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA] [GO:0008378 "galactosyltransferase activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR002659 Pfam:PF01762 GO:GO:0016021 GO:GO:0005794 GO:GO:0006486 GO:GO:0008378 TreeFam:TF318639 PANTHER:PTHR11214 GeneTree:ENSGT00740000114871 CTD:8705 KO:K00715 OMA:PFCSWLQ OrthoDB:EOG76MK8S EMBL:CU607018 RefSeq:XP_001927603.1 Ensembl:ENSSSCT00000001676 GeneID:100155431 KEGG:ssc:100155431 Uniprot:F1RZT4)

HSP 1 Score: 47.3654 bits (111), Expect = 6.507e-5
Identity = 24/67 (35.82%), Postives = 34/67 (50.75%), Query Frame = 0

Query:   84 LLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSFE 150
            LLILV    D   +R  IR SWG+         +T+F+LG     +   +L  E   HGDI+Q +F+
Sbjct:   73 LLILVCTAPDNLNQRNAIRASWGRLREARGLRVQTLFLLGEPSGGSRENDLARESAAHGDIVQAAFQ 139

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BLAST of EMLSAG00000005022 vs. GO
Match: - (symbol:B3GNT3 "B3GNT3 protein" species:9913 "Bos taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA] [GO:0008378 "galactosyltransferase activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR002659 Pfam:PF01762 GO:GO:0016021 GO:GO:0005794 GO:GO:0006486 GO:GO:0008378 CAZy:GT31 TreeFam:TF318639 PANTHER:PTHR11214 HOVERGEN:HBG050653 OrthoDB:EOG7BGHKT CTD:10331 KO:K07970 OMA:CAQPVFL GeneTree:ENSGT00740000115239 EMBL:DAAA02019067 EMBL:BC134623 RefSeq:NP_001091943.1 RefSeq:XP_005208587.1 UniGene:Bt.1272 Ensembl:ENSBTAT00000064569 GeneID:784997 KEGG:bta:784997 NextBio:20927028 Uniprot:A4IFK5)

HSP 1 Score: 46.595 bits (109), Expect = 1.074e-4
Identity = 32/115 (27.83%), Postives = 52/115 (45.22%), Query Frame = 0

Query:   39 NSSTYTGPIVDGWPPNISRVLEDYVPRKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKE----LQNEINIHGDILQGSF 149
            N+S  + P   G PP+I   L     R       +P +       LL+++K     YE+RE +R +WG+    L    R +F++G + +   +++    L  E   H DILQ  F
Sbjct:   64 NTSLMSLPDFAGQPPHIRDFLLYKHCRDFALLQEVPPDKCADPVFLLLVIKSSPSNYERRELVRRTWGRERQILGVQLRRLFLVGTDSNPLEARKVNRLLAMEARTHEDILQWDF 178

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BLAST of EMLSAG00000005022 vs. GO
Match: - (symbol:brn "brainiac" species:7227 "Drosophila melanogaster" [GO:0005576 "extracellular region" evidence=ISS] [GO:0007293 "germarium-derived egg chamber formation" evidence=IMP] [GO:0042248 "maintenance of polarity of follicular epithelium" evidence=IMP] [GO:0007299 "ovarian follicle cell-cell adhesion" evidence=IMP] [GO:0007298 "border follicle cell migration" evidence=IMP] [GO:0016333 "morphogenesis of follicular epithelium" evidence=IMP] [GO:0030707 "ovarian follicle cell development" evidence=IMP;TAS] [GO:0046981 "beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase activity" evidence=IDA] [GO:0006688 "glycosphingolipid biosynthetic process" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=NAS] [GO:0008375 "acetylglucosaminyltransferase activity" evidence=TAS] [GO:0016020 "membrane" evidence=IEA] [GO:0008378 "galactosyltransferase activity" evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA] [GO:0001744 "optic lobe placode formation" evidence=IMP] InterPro:IPR002659 Pfam:PF01762 GO:GO:0016021 GO:GO:0005576 GO:GO:0000139 EMBL:AE014298 GO:GO:0006688 GO:GO:0006486 GO:GO:0005795 GO:GO:0007219 GO:GO:0007298 CAZy:GT31 PANTHER:PTHR11214 EMBL:AL033125 BRENDA:2.4.1.62 eggNOG:NOG271304 GO:GO:0047915 GeneTree:ENSGT00740000115616 KO:K02175 EMBL:U41449 EMBL:BT021250 EMBL:AY070536 RefSeq:NP_476901.1 UniGene:Dm.1589 ProteinModelPortal:Q24157 BioGrid:57876 IntAct:Q24157 MINT:MINT-283889 PaxDb:Q24157 PRIDE:Q24157 EnsemblMetazoa:FBtr0070638 GeneID:31358 KEGG:dme:Dmel_CG4934 CTD:31358 FlyBase:FBgn0000221 InParanoid:Q24157 OMA:EALFEMY OrthoDB:EOG708W0K PhylomeDB:Q24157 SignaLink:Q24157 GenomeRNAi:31358 NextBio:773230 PRO:PR:Q24157 Bgee:Q24157 GO:GO:0046981 GO:GO:0007293 GO:GO:0042248 GO:GO:0001744 GO:GO:0007299 Uniprot:Q24157)

HSP 1 Score: 46.2098 bits (108), Expect = 1.415e-4
Identity = 26/68 (38.24%), Postives = 35/68 (51.47%), Query Frame = 0

Query:   82 TELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSF 149
              L +L+K  V    +RE IR +WG        H R VF+LG  +D  + K++  E   HGDILQ  F
Sbjct:   78 ARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAED--SEKDVAWESREHGDILQAEF 143

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BLAST of EMLSAG00000005022 vs. GO
Match: - (symbol:B3gnt6 "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)" species:10116 "Rattus norvegicus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA] [GO:0008378 "galactosyltransferase activity" evidence=IEA;ISO] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR002659 Pfam:PF01762 RGD:1310926 GO:GO:0016021 GO:GO:0005794 EMBL:CH473956 GO:GO:0006486 GO:GO:0008378 TreeFam:TF318639 PANTHER:PTHR11214 OrthoDB:EOG7BGHKT GeneTree:ENSGT00740000115239 CTD:192134 KO:K00739 OMA:IRPFGVQ EMBL:AABR06007485 RefSeq:NP_001099681.1 RefSeq:XP_006229807.1 UniGene:Rn.104873 Ensembl:ENSRNOT00000046850 GeneID:292325 KEGG:rno:292325 UCSC:RGD:1310926 NextBio:634035 Uniprot:D3ZC66)

HSP 1 Score: 45.0542 bits (105), Expect = 3.154e-4
Identity = 29/94 (30.85%), Postives = 44/94 (46.81%), Query Frame = 0

Query:   77 IDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKE------LQNEINIHGDILQGSFELNDLNYQCNGPYLL 164
            + P    LL+ VK     YE+RE IR +WG+  +      R +F++G +     ++E      L  E   HGD+LQ  F+   LN      +LL
Sbjct:  107 VGPRGVFLLLAVKSSPAHYERRELIRRTWGQERSYSGQQVRRLFLVGTSSPEEAAREPQLADLLSLEAREHGDVLQWDFKDTFLNLTLKHLHLL 200

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BLAST of EMLSAG00000005022 vs. C. finmarchicus
Match: gi|592763546|gb|GAXK01191022.1| (TSA: Calanus finmarchicus comp2172992_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 51.6026 bits (122), Expect = 2.647e-7
Identity = 25/67 (37.31%), Postives = 38/67 (56.72%), Query Frame = 0

Query:   83 ELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSF 149
            ++L +V   V+ +  R+ IR SWG         SR VFILG   + T  +E+++E  +HGDI+Q  F
Sbjct:  225 DILSVVNSAVENFRARQAIRASWGASKQDYGVVSRVVFILGVGDNATLQEEVKDEYLLHGDIVQAEF 425

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BLAST of EMLSAG00000005022 vs. C. finmarchicus
Match: gi|592763545|gb|GAXK01191023.1| (TSA: Calanus finmarchicus comp2172992_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 50.447 bits (119), Expect = 4.688e-7
Identity = 26/76 (34.21%), Postives = 40/76 (52.63%), Query Frame = 0

Query:   74 PREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSF 149
            P+       ++L +V   V+ +  R+ IR SWG         SR VFILG   + T  +E+++E  +HGDI+Q  F
Sbjct:  175 PKFCSKRIIDILSVVHSAVENFGARQAIRASWGASKQDYGVVSRVVFILGVGDNATLQEEVKDEYLLHGDIVQAEF 402

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BLAST of EMLSAG00000005022 vs. C. finmarchicus
Match: gi|592763547|gb|GAXK01191021.1| (TSA: Calanus finmarchicus comp2172992_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 50.0618 bits (118), Expect = 9.082e-7
Identity = 26/67 (38.81%), Postives = 37/67 (55.22%), Query Frame = 0

Query:   83 ELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSF 149
            E+L +V   V+    R+ IR SWG         SR VFILG   + T  +E+++E  +HGDI+Q  F
Sbjct:  246 EILSVVHSAVENVAARDAIRASWGSPKHDYGIVSRVVFILGVGDNATLQEEVKDEYLLHGDIVQAEF 446

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BLAST of EMLSAG00000005022 vs. C. finmarchicus
Match: gi|592763544|gb|GAXK01191024.1| (TSA: Calanus finmarchicus comp2172992_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 48.521 bits (114), Expect = 2.860e-6
Identity = 25/67 (37.31%), Postives = 37/67 (55.22%), Query Frame = 0

Query:   83 ELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSF 149
            ++L +V   V+    R+ IR SWG         SR VFILG   + T  +E+++E  +HGDI+Q  F
Sbjct:  202 DILSVVHSAVENVAARDAIRASWGSPKHDYGIVSRVVFILGVGDNATLQEEVKDEYLLHGDIVQAEF 402

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BLAST of EMLSAG00000005022 vs. C. finmarchicus
Match: gi|592802540|gb|GAXK01152028.1| (TSA: Calanus finmarchicus comp927180_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 44.669 bits (104), Expect = 1.751e-4
Identity = 28/83 (33.73%), Postives = 39/83 (46.99%), Query Frame = 0

Query:   70 FTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSFELN 152
            F ILP ++       +I+V      +  R+ IR SWG        ++  VF++G   D     E+  E   HGDILQG FE N
Sbjct:  460 FAILP-QVGCSRARSVIIVFTAAHYFRDRQLIRQSWGSQKQLKIVNAVLVFVIGEFNDEKVQTEILKESKRHGDILQGQFEEN 705

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BLAST of EMLSAG00000005022 vs. C. finmarchicus
Match: gi|592952947|gb|GAXK01005606.1| (TSA: Calanus finmarchicus comp234255_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 42.743 bits (99), Expect = 6.566e-4
Identity = 25/67 (37.31%), Postives = 37/67 (55.22%), Query Frame = 0

Query:   84 LLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNN-KDWTNSKELQNEINIHGDILQGSF 149
            +L LVK  +   +KRE IR +WG          RTVF+LG+   D     +++ E  +H DI+QG+F
Sbjct:  631 VLFLVKSAMANTDKREVIRKTWGFEKRFSDVPIRTVFLLGHAPHDVRLQAQVEAESQLHNDIVQGNF 831

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BLAST of EMLSAG00000005022 vs. C. finmarchicus
Match: gi|592952948|gb|GAXK01005605.1| (TSA: Calanus finmarchicus comp234255_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 42.743 bits (99), Expect = 6.990e-4
Identity = 25/68 (36.76%), Postives = 37/68 (54.41%), Query Frame = 0

Query:   83 ELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNN-KDWTNSKELQNEINIHGDILQGSF 149
             +L LVK  +   +KRE IR +WG          RTVF+LG+   D     +++ E  +H DI+QG+F
Sbjct:  540 RVLFLVKSAMANTDKREVIRKTWGFEKRFSDVPIRTVFLLGHAPHDVRLQAQVEAESQLHNDIVQGNF 743

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BLAST of EMLSAG00000005022 vs. C. finmarchicus
Match: gi|592952949|gb|GAXK01005604.1| (TSA: Calanus finmarchicus comp234255_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 42.743 bits (99), Expect = 7.537e-4
Identity = 25/68 (36.76%), Postives = 37/68 (54.41%), Query Frame = 0

Query:   83 ELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNN-KDWTNSKELQNEINIHGDILQGSF 149
             +L LVK  +   +KRE IR +WG          RTVF+LG+   D     +++ E  +H DI+QG+F
Sbjct:  632 RVLFLVKSAMANTDKREVIRKTWGFEKRFSDVPIRTVFLLGHAPHDVRLQAQVEAESQLHNDIVQGNF 835

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BLAST of EMLSAG00000005022 vs. C. finmarchicus
Match: gi|592754387|gb|GAXK01200026.1| (TSA: Calanus finmarchicus comp2693984_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 37.7354 bits (86), Expect = 2.330e-2
Identity = 30/85 (35.29%), Postives = 43/85 (50.59%), Query Frame = 0

Query:   67 SDF-FTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHS-RTVFILGNNKDWTNSKELQNEINIHGDILQGSF 149
            +DF FTI     + I   L+ILV       E RE IR +WG   T++     + VF+LG        ++L+ E   H D++QGSF
Sbjct:  202 TDFHFTINNDICNTIPLTLVILVHSATLNKEAREIIRSTWGT--TRVQDFQIKLVFLLGQPDSSQIQEDLEAENAEHRDLVQGSF 450

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BLAST of EMLSAG00000005022 vs. C. finmarchicus
Match: gi|592820874|gb|GAXK01133694.1| (TSA: Calanus finmarchicus comp738729_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 5.409e-2
Identity = 30/85 (35.29%), Postives = 42/85 (49.41%), Query Frame = 0

Query:   66 KSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSFE 150
            K+    +L   I  I+ E++ILV      +E R + R S      KLS + + VFIL  +     S E+  E +IHGDIL G  E
Sbjct:  288 KAAIEILLKPNICDISDEVVILVHSHAANFELRSSQRKS-----GKLSQNIKFVFILFKSSSVEES-EIHKEHSIHGDILLGDKE 524

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BLAST of EMLSAG00000005022 vs. L. salmonis peptides
Match: EMLSAP00000005022 (pep:novel supercontig:LSalAtl2s:LSalAtl2s260:905331:907350:1 gene:EMLSAG00000005022 transcript:EMLSAT00000005022 description:"maker-LSalAtl2s260-snap-gene-9.19")

HSP 1 Score: 519.62 bits (1337), Expect = 0.000e+0
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0

Query:    1 MFEGSITMDSSLKSSACDKKTRRLFQSLPKTDFKFNYTNSSTYTGPIVDGWPPNISRVLEDYVPRKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSFELNDLNYQCNGPYLLGGLQNGVLPRMMSIMSFETESYNLPVFHLEDVFMTGFSAKRCGIEPRQQKGLLTWNIPLQSFDVNYHVAFHIIEYSKEIQTDLGG 249
            MFEGSITMDSSLKSSACDKKTRRLFQSLPKTDFKFNYTNSSTYTGPIVDGWPPNISRVLEDYVPRKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSFELNDLNYQCNGPYLLGGLQNGVLPRMMSIMSFETESYNLPVFHLEDVFMTGFSAKRCGIEPRQQKGLLTWNIPLQSFDVNYHVAFHIIEYSKEIQTDLGG
Sbjct:    1 MFEGSITMDSSLKSSACDKKTRRLFQSLPKTDFKFNYTNSSTYTGPIVDGWPPNISRVLEDYVPRKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSFELNDLNYQCNGPYLLGGLQNGVLPRMMSIMSFETESYNLPVFHLEDVFMTGFSAKRCGIEPRQQKGLLTWNIPLQSFDVNYHVAFHIIEYSKEIQTDLGG 249

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BLAST of EMLSAG00000005022 vs. L. salmonis peptides
Match: EMLSAP00000005012 (pep:novel supercontig:LSalAtl2s:LSalAtl2s260:579602:581406:-1 gene:EMLSAG00000005012 transcript:EMLSAT00000005012 description:"maker-LSalAtl2s260-snap-gene-6.17")

HSP 1 Score: 370.933 bits (951), Expect = 3.703e-129
Identity = 196/286 (68.53%), Postives = 214/286 (74.83%), Query Frame = 0

Query:    1 MFEGSITMDSSLKSSACDKKTRRLFQSLPKTDFKFNYTNSSTYTGPIVDGWPPNISRVLEDYVPRKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSFELNDLNYQCNGP-----------------YLLGG-LQNGVLPRMMSIMSFETES------YNLPV---------------FHLEDVFMTGFSAKRCGIEPRQQKGLLTWNIPLQSFDVNYHVAFHIIEYSKEIQTDL 247
            MFEG ITMDSSL+SSACDKKTRRLFQSLPKTDFKFNYTNSSTYTGPIVDGWPPNISRVLEDY+P+KSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSF  +  N     P                 Y+    +    L  MMSIMSFET+       Y+L +               F+LEDVF+TGF AKRCGIE R+ KGL+TW + LQSFDVN  VAF +I Y KE+  ++
Sbjct:    1 MFEGGITMDSSLRSSACDKKTRRLFQSLPKTDFKFNYTNSSTYTGPIVDGWPPNISRVLEDYIPKKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSFVDSYYNLTLKTPHTNPKSAKKLSKWGVPSYMFADEIYPPFLRGMMSIMSFETQVFLSFMIYDLKILNIFFTDRNPIISHFFYLEDVFITGFCAKRCGIERRELKGLITWPMGLQSFDVNNDVAFPVIHYRKEMYHEI 286

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BLAST of EMLSAG00000005022 vs. L. salmonis peptides
Match: EMLSAP00000006586 (pep:novel supercontig:LSalAtl2s:LSalAtl2s361:81765:93391:1 gene:EMLSAG00000006586 transcript:EMLSAT00000006586 description:"maker-LSalAtl2s361-augustus-gene-1.5")

HSP 1 Score: 191.43 bits (485), Expect = 1.849e-58
Identity = 116/314 (36.94%), Postives = 154/314 (49.04%), Query Frame = 0

Query:   13 KSSACDKKTRRLFQSLPKTDFKFNYTNSSTYTGPIVDGWPPNISRVLEDYVPRKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSF-----------------------------------------------ELNDLNYQCNGPYLLGGLQNG--------------------------VLPR----MMSIMSFET------ESYNLPVFHLEDVFMTGFSAKRCGIEPRQQKGLLTWNIPLQSFDVNYHVAFHIIEYSKEI 243
            KS +C +KT   F +L K D K NY NSS Y GPIV GWPP  SRV+E+YVP++ + F   P  ID   TELLI++K +V  ++ R  IR SW K L KLSP+S  VFI G      +S++L NE   HGDILQG+F                                                +NDLN +C GPYLLG L                             V P     + +IMSFE+      ES+ LP FH++DVF+TG+ A RCGI P Q  G++  ++ L +F+  YH+AF   +Y+ E+
Sbjct:   19 KSDSCQEKTHERFLNLSKIDLKLNYENSSNYKGPIVKGWPPTASRVIENYVPKQINTFITSPTNIDLTKTELLIIIKTRVYAFKNRWKIRESWAKVLAKLSPYSAIVFIAGEG----SSEKLGNETKTHGDILQGNFMDSYHNLTLKLISALKFASETIKWINEPKIIVVMDDDVFVNVPLLLKRINDLNKKCEGPYLLGHLYTNSRVEHDPPTYQFSSKWGVPSYMLTADVYPHYLHGLFTIMSFESSRCLLKESFQLPYFHIDDVFITGYCAIRCGIMPTQFNGIMNGHVELNAFNPGYHIAFPANQYNSEM 328

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BLAST of EMLSAG00000005022 vs. L. salmonis peptides
Match: EMLSAP00000004592 (pep:novel supercontig:LSalAtl2s:LSalAtl2s23:276374:278897:1 gene:EMLSAG00000004592 transcript:EMLSAT00000004592 description:"maker-LSalAtl2s23-snap-gene-2.49")

HSP 1 Score: 145.976 bits (367), Expect = 7.470e-42
Identity = 82/217 (37.79%), Postives = 117/217 (53.92%), Query Frame = 0

Query:    6 ITMDSSLKSSA---CDKKTRRLFQSLPKTDFKFNYTNSSTYTGPIVDGWPPNISRVLEDYVPRKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSF----------------------------------------------ELNDLNYQCNGPYLLGG-LQNGVL 172
            ++MD  +K  A   C+K+T+  +QS  +TDFK NY+NSSTY GPIV GW PN+SR ++ YVP++  FFTILPR ++   TELLI++K +VDG   R +IR SW K L +L   + TVF++G  +   +   L+ E   +GDI+QG+F                                               ++DLN +C GPY +GG LQN V+
Sbjct:   39 LSMDQIIKRRASFLCEKRTQHRYQSFIRTDFKLNYSNSSTYHGPIVKGWGPNVSRDIDKYVPKQKGFFTILPRAVNLETTELLIIIKTRVDGLNNRMDIRQSWLKTLKRLRKSAATVFLVGKKEGSVDYSSLKIESEKYGDIIQGNFVDSYFNLTLKTIATHKFVIETEWVNRPKMIITLDDDVFVNAPLFLKTVDDLNQRCEGPYYVGGLLQNNVV 255

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BLAST of EMLSAG00000005022 vs. L. salmonis peptides
Match: EMLSAP00000012205 (pep:novel supercontig:LSalAtl2s:LSalAtl2s884:137712:140689:-1 gene:EMLSAG00000012205 transcript:EMLSAT00000012205 description:"maker-LSalAtl2s884-snap-gene-1.15")

HSP 1 Score: 100.908 bits (250), Expect = 3.684e-25
Identity = 75/272 (27.57%), Postives = 116/272 (42.65%), Query Frame = 0

Query:   13 KSSACDKKTRRLFQSLPKTDFKFNYTNSSTYTGPIVDGWPPNISRVLEDYVPRKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWT--NSKELQNEINIHGDILQGSF--------------------------------ELND---LN------------YQCNGPYLLGGLQNGVLPRMMSIMSFETESYNLPVFHLEDVFMTGFSAKRCGIEPRQQKGLLTWNIPLQSFDVNYHVAFH 235
            K    +K+TRR         F   +TN+S+Y GP + GWPP+ SR +  Y+ ++S+ + + P+ +D   T+ LI++K                     KLS +S  +F++G  +  +  N K L  EI  HGDILQ  F                                +++D   LN              C  PYL G +     P  +S  +   E++NLP FHLED+F+T F+A +C I   + KG+L W    +   +    A H
Sbjct:   36 KDVITNKRTRR---------FNIEFTNASSYYGPTIPGWPPSASRDISKYISKESESYLVYPKSLDVKQTDFLIVLK---------------------KLSNNSSYIFVIGREESLSNGNRKILDTEITDHGDILQEDFIDSYYNLTLKSIISLKFLTRTVIWTKKPRRFLKIDDDVFLNIPLLLKSVFSPALWCKEPYLGGVILGNFTPNALSPTA--REAFNLPYFHLEDIFITSFAATKCNINLDRIKGILFWRTKKEHILLTKKFAIH 275

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BLAST of EMLSAG00000005022 vs. L. salmonis peptides
Match: EMLSAP00000008816 (pep:novel supercontig:LSalAtl2s:LSalAtl2s549:477472:489508:-1 gene:EMLSAG00000008816 transcript:EMLSAT00000008816 description:"maker-LSalAtl2s549-snap-gene-5.30")

HSP 1 Score: 48.521 bits (114), Expect = 6.115e-7
Identity = 37/107 (34.58%), Postives = 59/107 (55.14%), Query Frame = 0

Query:   47 IVDGWPPNISRVLEDYVPRKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSR-TVFILGN---NKDWTNSKELQNEINIHGDILQGSF 149
            +V  WP N SR ++ YV  KS+F  + P ++   + EL++ +      +EKRE+IR SW K     +P +   +F+LG    N+  T +  L++E   + DILQG F
Sbjct:   72 MVPIWPMNQSRDVDTYV--KSNFL-LEPDDVCSKSKELIVFITSSPRNFEKRESIRSSWAKD----APSNVGVIFVLGQYQGNQTVTLNITLESE--KYKDILQGDF 169

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BLAST of EMLSAG00000005022 vs. Select Arthropod Genomes
Match: EEB10287.1 (beta-1,3-galactosyltransferase, putative [Pediculus humanus corporis])

HSP 1 Score: 52.373 bits (124), Expect = 4.561e-7
Identity = 33/117 (28.21%), Postives = 58/117 (49.57%), Query Frame = 0

Query:   33 FKFNYTNSSTYTGPIVDGWPPNISRVLEDYVPRKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSF 149
            F F+  +S       ++GW  + SR +  YV   +D   I+  E+      LL+++   V+   +R  IR +WG      +P    VF+LG  ++ T  + ++ E N+H DI+Q +F
Sbjct:   61 FYFDDGDSKKPGNAAIEGWGVDTSRSVSHYVTPDNDTSLIVSNELCSEPLLLLVIICSAVNNTLERMTIRKTWGNC---SNPSYSLVFLLGTTENSTLQENVEEESNLHNDIIQENF 174

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BLAST of EMLSAG00000005022 vs. nr
Match: gi|225710604|gb|ACO11148.1| (Beta-1,3-galactosyltransferase 1 [Caligus rogercresseyi])

HSP 1 Score: 150.599 bits (379), Expect = 4.976e-40
Identity = 90/292 (30.82%), Postives = 135/292 (46.23%), Query Frame = 0

Query:   17 CDKKTRRLFQSLPKTDFKFNYTNSSTYTGPIVDGWPPNISRVLEDYVPRKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILG-NNKDWTNSKELQNEINIHGDILQGSF----------------------------------------------ELNDLNYQCNGPYLLGGLQNGVLPR------------------------------MMSIMSFET------ESYNLPVFHLEDVFMTGFSAKRCGIEPRQQKG---LLTWNIP 222
            C +K  +  + LP+ +F  ++T+  +Y GPIV GW P  +R++ DY+P+  + FT+LPR +DP+ T++L ++K +VDG+  R   R  WGK L  L P +R +FI+G  + +  N+K L  EIN HGDILQ +                                               ++ +++ QC GP L G   N   P                               +   MS ET      E+YNLP FH++DVF+ GF A RCGI+P++  G   L+T  IP
Sbjct:   45 CQRKMAQSMRRLPRRNFNLSHTDKDSYKGPIVLGWDPQRNRIINDYLPKNENVFTVLPRHVDPLTTDMLFIIKTRVDGFSNRNRTRSLWGKLLHILKPSARVIFIIGRTDLNSLNTKRLNEEINTHGDILQVNVSDSYYNLTLKTLAAHKFVVDKEWILEPEYVMILDDDMFLNVPLFLRKMKEMSDQCQGPLLHGYFSNNYFPVQDGLTQKLSSRWGAPSYMLVDKVYPAYVYGVHVTMSHETVKCLYEEAYNLPFFHIDDVFINGFCAYRCGIQPQRFIGVNILVTRFIP 336

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BLAST of EMLSAG00000005022 vs. nr
Match: gi|225718032|gb|ACO14862.1| (Beta-1,3-galactosyltransferase 1 [Caligus clemensi])

HSP 1 Score: 139.428 bits (350), Expect = 1.231e-35
Identity = 100/311 (32.15%), Postives = 141/311 (45.34%), Query Frame = 0

Query:   10 SSLKSSACDKKTRRLFQSLPKTDFKFNYTNSSTYTGPIVDGWPPNISRVLEDYVPRKSDFFTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKDWTNSKELQNEINIHGDILQGSF--------------------------------------------ELNDLNYQCNGPYLLGGL-----------------QNGVLPRM--------------MSIMSFET------ESYNLPVFHLEDVFMTGFSAKRCGIEPRQQKGLLTWNIPLQSFDVNYHVAFHIIEY 239
            S+ K + C+ KTR     L   D+ + Y + S   G +V GW PN SR + DY+P+ +  F + P+ IDP +TELLIL+K +V   E R  IR SW + L +L   S+ +F+LG N    +  EL +EI  +GDIL G+F                                            ++ DLN  C GPYLLG                   + GV P +              M IMSFET      E++NLP FH++D F+TGF   RCGI P Q + +   +I  Q F+V+ ++   I  Y
Sbjct:   42 SNSKLTPCEMKTRLTLDHLVTKDWVYKYESYSG--GVVVPGWLPNASRDINDYLPKNNLSFLVTPKNIDP-STELLILIKTRVINKEARSRIRNSWYRLLMRLHSRSKIIFVLGRNGSNWSIPELSDEIEGYGDILVGNFIDTYYNLTLKLVSAFEFTLNTEWKPKIVVTVDDDMFINVPVFLRKIKDLNSNCEGPYLLGYTGANYQPLVDNSNNKNIRKWGVPPYLASSNQSFPPYTHGAMVIMSFETVECIYKEAFNLPFFHIDDAFITGFCPYRCGIRPVQLENMQLGSINQQRFNVSSYIVSRINNY 349

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BLAST of EMLSAG00000005022 vs. nr
Match: gi|225711508|gb|ACO11600.1| (Beta-1,3-galactosyltransferase 1 [Caligus rogercresseyi])

HSP 1 Score: 93.5893 bits (231), Expect = 1.467e-18
Identity = 49/122 (40.16%), Postives = 70/122 (57.38%), Query Frame = 0

Query:   30 KTDFKFNYTNSSTYTGPIVDGWPPNISRVLEDYVPRKSDF-FTILPREIDPIATELLILVKMQVDGYEKRENIRGSWGKHLTKLSPHSRTVFILGNNKD-WTNSKELQNEINIHGDILQGSF 149
            + DF   Y N+S Y GPI+ GWPP+ SR +EDY+PR  +    + P+ ++   T  LI++  +   +E R  IR +WGK L  L+ +S  +FILG  K       +L+ EI  HGDI QG F
Sbjct:   68 RCDFNLEYGNASGYKGPIISGWPPSKSRRIEDYIPRGYEKPGRVFPKNLNLQNTRFLIIIHSRWKSFETRRVIRETWGKTLKALNRNSSYIFILGMTKAPHYLDDQLKEEIQAHGDIFQGDF 189

The following BLAST results are available for this feature:

BLAST of EMLSAG00000005022 vs. GO
BLAST of EMLSAG00000005022 vs. C. finmarchicus
BLAST of EMLSAG00000005022 vs. L. salmonis peptides
BLAST of EMLSAG00000005022 vs. SwissProt
BLAST of EMLSAG00000005022 vs. Select Arthropod Genomes
BLAST of EMLSAG00000005022 vs. nr
BLAST of EMLSAG00000005022 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000005022 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 4


Match Name	E-value	Identity	Description
-	6.507e-5	35.82	symbol:B3GALT4 "Uncharacterized protein" species:9...	[more]
-	1.074e-4	27.83	symbol:B3GNT3 "B3GNT3 protein" species:9913 "Bos t...	[more]
-	1.415e-4	38.24	symbol:brn "brainiac" species:7227 "Drosophila mel...	[more]
-	3.154e-4	30.85	symbol:B3gnt6 "UDP-GlcNAc:betaGal beta-1,3-N-acety...	[more]

BLAST of EMLSAG00000005022 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592763546\|gb\|GAXK01191022.1\|	2.647e-7	37.31	TSA: Calanus finmarchicus comp2172992_c0_seq2 tran...	[more]
gi\|592763545\|gb\|GAXK01191023.1\|	4.688e-7	34.21	TSA: Calanus finmarchicus comp2172992_c0_seq3 tran...	[more]
gi\|592763547\|gb\|GAXK01191021.1\|	9.082e-7	38.81	TSA: Calanus finmarchicus comp2172992_c0_seq1 tran...	[more]
gi\|592763544\|gb\|GAXK01191024.1\|	2.860e-6	37.31	TSA: Calanus finmarchicus comp2172992_c0_seq4 tran...	[more]
gi\|592802540\|gb\|GAXK01152028.1\|	1.751e-4	33.73	TSA: Calanus finmarchicus comp927180_c0_seq1 trans...	[more]
gi\|592952947\|gb\|GAXK01005606.1\|	6.566e-4	37.31	TSA: Calanus finmarchicus comp234255_c0_seq3 trans...	[more]
gi\|592952948\|gb\|GAXK01005605.1\|	6.990e-4	36.76	TSA: Calanus finmarchicus comp234255_c0_seq2 trans...	[more]
gi\|592952949\|gb\|GAXK01005604.1\|	7.537e-4	36.76	TSA: Calanus finmarchicus comp234255_c0_seq1 trans...	[more]
gi\|592754387\|gb\|GAXK01200026.1\|	2.330e-2	35.29	TSA: Calanus finmarchicus comp2693984_c0_seq1 tran...	[more]
gi\|592820874\|gb\|GAXK01133694.1\|	5.409e-2	35.29	TSA: Calanus finmarchicus comp738729_c0_seq2 trans...	[more]

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BLAST of EMLSAG00000005022 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 6


Match Name	E-value	Identity	Description
EMLSAP00000005022	0.000e+0	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s260:90533...	[more]
EMLSAP00000005012	3.703e-129	68.53	pep:novel supercontig:LSalAtl2s:LSalAtl2s260:57960...	[more]
EMLSAP00000006586	1.849e-58	36.94	pep:novel supercontig:LSalAtl2s:LSalAtl2s361:81765...	[more]
EMLSAP00000004592	7.470e-42	37.79	pep:novel supercontig:LSalAtl2s:LSalAtl2s23:276374...	[more]
EMLSAP00000012205	3.684e-25	27.57	pep:novel supercontig:LSalAtl2s:LSalAtl2s884:13771...	[more]
EMLSAP00000008816	6.115e-7	34.58	pep:novel supercontig:LSalAtl2s:LSalAtl2s549:47747...	[more]

BLAST of EMLSAG00000005022 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000005022 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1


Match Name	E-value	Identity	Description
EEB10287.1	4.561e-7	28.21	beta-1,3-galactosyltransferase, putative [Pediculu...	[more]

BLAST of EMLSAG00000005022 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 3


Match Name	E-value	Identity	Description
gi\|225710604\|gb\|ACO11148.1\|	4.976e-40	30.82	Beta-1,3-galactosyltransferase 1 [Caligus rogercre...	[more]
gi\|225718032\|gb\|ACO14862.1\|	1.231e-35	32.15	Beta-1,3-galactosyltransferase 1 [Caligus clemensi...	[more]
gi\|225711508\|gb\|ACO11600.1\|	1.467e-18	40.16	Beta-1,3-galactosyltransferase 1 [Caligus rogercre...	[more]

BLAST of EMLSAG00000005022 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s260	supercontig	LSalAtl2s260:905331..907350 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s260-snap-gene-9.19
Biotype	protein_coding
Evidence	IEA
Note	Beta-1,3-galactosyltransferase 1 [Caligus rogercresseyi]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000005022 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000005022	EMLSAT00000005022-700869	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s260:905331..907350+

gene from alignment at LSalAtl2s260:905331..907350+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000005022-687788 ID=EMLSAG00000005022-687788|Name=EMLSAG00000005022|organism=Lepeophtheirus salmonis|type=gene|length=2020bp|location=Sequence derived from alignment at LSalAtl2s260:905331..907350+ (Lepeophtheirus salmonis)
ATGTTTGAAGGGAGCATTACAATGGATTCATCACTGAAATCCTCTGCTTG
TGATAAAAAAACTAGAAGATTGTTCCAAAGTCTGCCAAAGACGGATTTTA
AGTTTAACTATACCAACAGCTCAACATACACTGGCCCAATAGTTGATGGA
TGGCCACCAAATATCTCACGAGTATTAGAGGACTATGTGCCTAGAAAATC
GGATTTCTTTACGATATTGCCTAGAGAAATTGACCCTATAGCCACAGAAC
TATTAATCCTTGTCAAAATGTAAGTACATCAAATGCCAATTTATCACAGA
ATTAACACTTTAATGAAAAACAATTTAGGCAAGTTGATGGTTACGAGAAA
CGGGAGAATATTCGTGGATCCTGGGGAAAACATCTTACTAAATTAAGTCC
TCATTCACGGACAGTATTTATATTAGGGAATAACAAGGACTGGACGAATT
CCAAGGAACTCCAAAATGAAATTAATATCCATGGAGATATTCTTCAAGGA
TCCTTTGTTGACTCCTATTATAACCTTACTCTTAAAACCGTCAGTGCTTT
CAAGTTCGTAGTAGGTAGAGTAAATTAAAGTCCGTAAATACAGGGGCGTC
CACATGATTGATTTTTTTTGGAGGGCAAATTAGTTTTTGGAATTTCTTCT
AAAAAAAAAAAATATTCAATTTTTTGCCTATGTATAATTTGCCCGAATGA
CGAAAAAAATTCTAGTAAACAGCAAAAGTTTAAAATAACCACCCTGTTGA
CKTACCCCAGAGTCCACCTCCTGCAGACGTCCCTTCAATAATTGGAGATA
TGATACTTTATTTGCGTACGTTTGTGTATTTTAGAGACTATTAAATGGAT
TCACAGGCCAAAAATAATTATAACAATAGATGATGACGTTTTTCTGAATA
TGCCTCTACTTTTAAAGGAGTTGAATGATTTAAACTACCAATGTAATGGT
CCATATCTATTGGGAGGACTTCAAAATGGAGTCCTCCCACGTAGGAATCC
CAAAAGTGRAAAAAAAAGTTCWAAATGGGGAGTTNCCAAGTTACATTTTT
GCGGATAAAATCTATCCTCCATATATCGAAGGAATGATGTCAATCATGTC
CTTTGAAACCGTACAATGTTTATTTGAAGCACGTTTCTTCATCCTTCTTG
ATTTATGATTTAAAAATTCTTAAATTTTTTTTTTTTACTGATAGGAATCC
TATAATCTCCCAGTTTTTCATCTTGAGGACGTTTTCATGACTGGTTTTTC
TGCTAAACGATGTGGAATAGAGCCAAGACAACAAAAGGGGTTATTAACTT
GGAATATTCCTCTACAGAGCTTTGACGTCAATTATCATGTAGCATTTCAT
ATTATTGAATACAGTAAAGAGATGTACAACGAAATAGAAAAAAATTTACC
CTTATAAAATGGTTAGAGATGTGATCTTACAGAACAAATTAAAATATTAA
TTTGTGTAAAAAACTATCTAACACAATTTTTATTAATTTTTAAATGATTT
TTTGTGAAATATATTTTTTCAGTATTTGATGTGTAACCGAATGACAGTTA
ATTTTTTCATATTTTACATTAAATGTAGTCCCAAATAAATTGTAATTTAT
TCATTGAAATACCTAACACATGGTGTTTAGGAATAAAACGTGTAAAAATG
AGACGTTTTATAATAAAAGACCTGGGATATAATAACAATATAGCACGGTG
TTAATCGTGGTATATTTTAAACATGTTAAAAAACAAAAAAATCAAAATAG
TAATCCCGATAATTTGAAGAATGTTTTGGAGCAAAGTAAAGCATAAAACC
AAGTAGCGCATGGAGGGCTAACATCCTCAACCGCTGAAAAATGTCTTGAT
CAAATTTTACTTTTTTTGGCCGCTAGAGCCGGGATATAATGAAGAAGGCG
AATGCAGCTCCATTTTTGGTCCTGCAGCTGGTGTTTTAGAAAATTAGTTG
AGTCCTTCTCGGTAACTCAAAATTAATTTTATTAATTAATCTTAATAGTC
AAACGGATCTTGGTGGGTAG

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