EMLSAG00000005933, EMLSAG00000005933-688699 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000005933
Unique NameEMLSAG00000005933-688699
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000005933 vs. C. finmarchicus
Match: gi|592805238|gb|GAXK01149330.1| (TSA: Calanus finmarchicus comp96297_c4_seq1 transcribed RNA sequence)

HSP 1 Score: 46.2098 bits (108), Expect = 3.853e-6
Identity = 24/87 (27.59%), Postives = 40/87 (45.98%), Query Frame = 0 
Query:   19 NSQSTVR-ERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
            N  S++R    P +  ++T+N Y    F+ + +               +S+IV  C PW LY    Y G  + V+ +S  +C PG+Y
Sbjct:  418 NDASSLRFTGAPDDYLYDTLNIYFSDYFIGDEEFMYNDTPLLNYDNRARSVIVTGCSPWTLYQYDHYSGSAMCVFPASTSDCTPGYY 678
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BLAST of EMLSAG00000005933 vs. C. finmarchicus
Match: gi|592806332|gb|GAXK01148236.1| (TSA: Calanus finmarchicus comp1026702_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.1282 bits (100), Expect = 9.469e-6
Identity = 19/40 (47.50%), Postives = 24/40 (60.00%), Query Frame = 0 
Query:   65 GKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
             KS+IVA C  W LY    Y+G  + V+ S + NC PGFY
Sbjct:   51 AKSVIVAGCSAWTLYQYDNYQGAALCVFPSHMGNCNPGFY 170
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BLAST of EMLSAG00000005933 vs. C. finmarchicus
Match: gi|592909389|gb|GAXK01048986.1| (TSA: Calanus finmarchicus comp65445_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 43.8986 bits (102), Expect = 1.322e-5
Identity = 26/89 (29.21%), Postives = 39/89 (43.82%), Query Frame = 0 
Query:   17 LENSQSTVR-ERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
             +N  S+VR    P + +++T+N Y    F+ + +                S+IV  C PW LY    Y G  + V+ SS   C PG Y
Sbjct:   17 FDNKASSVRFTGAPDDWNYDTLNIYFNDFFIGDEEFTYDDKTQLNYDNRAMSVIVTGCSPWTLYESDHYTGSAMCVFPSSSTACTPGLY 283
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BLAST of EMLSAG00000005933 vs. C. finmarchicus
Match: gi|592909390|gb|GAXK01048985.1| (TSA: Calanus finmarchicus comp65445_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 1.993e-5
Identity = 26/89 (29.21%), Postives = 39/89 (43.82%), Query Frame = 0 
Query:   17 LENSQSTVR-ERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
             +N  S+VR    P + +++T+N Y    F+ + +                S+IV  C PW LY    Y G  + V+ SS   C PG Y
Sbjct:   87 FDNQASSVRFTGAPDDWNYDTLNIYFNDFFIGDEEFTYDDKTQLNYDNRAMSVIVTGCSPWTLYESDHYTGSAMCVFPSSSTACTPGLY 353
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BLAST of EMLSAG00000005933 vs. C. finmarchicus
Match: gi|592909384|gb|GAXK01048991.1| (TSA: Calanus finmarchicus comp65445_c4_seq1 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 3.250e-5
Identity = 26/89 (29.21%), Postives = 39/89 (43.82%), Query Frame = 0 
Query:   17 LENSQSTVR-ERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
             +N  S+VR    P + +++T+N Y    F+ + +                S+IV  C PW LY    Y G  + V+ SS   C PG Y
Sbjct:  220 FDNQASSVRFTGAPDDWNYDTLNIYFNDFFIGDEEFTYDDKTQLNYDNRAMSVIVTGCSPWTLYESDHYTGSAMCVFPSSSTACTPGLY 486
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BLAST of EMLSAG00000005933 vs. C. finmarchicus
Match: gi|592953641|gb|GAXK01004912.1| (TSA: Calanus finmarchicus comp5770152_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.9726 bits (97), Expect = 4.344e-5
Identity = 18/39 (46.15%), Postives = 26/39 (66.67%), Query Frame = 0 
Query:   66 KSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
            +S+IV  C+P+ +Y +  Y+GD I V+ SS   C PGFY
Sbjct:  108 RSLIVTECRPFTIYEKWDYQGDAICVFPSSTNFCNPGFY 224
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BLAST of EMLSAG00000005933 vs. C. finmarchicus
Match: gi|592909388|gb|GAXK01048987.1| (TSA: Calanus finmarchicus comp65445_c2_seq3 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 1.009e-4
Identity = 22/76 (28.95%), Postives = 33/76 (43.42%), Query Frame = 0 
Query:   29 PKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
            P + +++T+N Y    F+ + +                S+IV  C PW LY    Y G  + V+ SS   C PG Y
Sbjct:   16 PDDWNYDTLNIYFNDFFIGDEEFTYDDKTQLNYDNRAMSVIVTGCSPWTLYESDHYTGSAMCVFPSSSTACTPGLY 243
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BLAST of EMLSAG00000005933 vs. C. finmarchicus
Match: gi|592766454|gb|GAXK01188114.1| (TSA: Calanus finmarchicus comp10051_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 37.3502 bits (85), Expect = 4.645e-3
Identity = 24/101 (23.76%), Postives = 42/101 (41.58%), Query Frame = 0 
Query:    6 SSTTYILTVDT-LENSQSTVR-ERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
            S   Y + V    +N  S++R    P +  ++T+N Y    F+ + +               +SIIV  C  W +Y    Y+G+ + ++      C PG Y
Sbjct:  252 SGDNYCIDVPAQFDNQASSLRFTGAPDDWKYDTLNIYFNDYFIGDEEFTYNDMPQLNYDNRARSIIVTGCDAWTIYQYDNYQGNAMCLFPGDSSACNPGLY 554
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BLAST of EMLSAG00000005933 vs. C. finmarchicus
Match: gi|592798422|gb|GAXK01156146.1| (TSA: Calanus finmarchicus comp284306_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.5798 bits (83), Expect = 6.882e-3
Identity = 27/105 (25.71%), Postives = 44/105 (41.90%), Query Frame = 0 
Query:    3 FMFSSTTYILTVDTLENSQSTVRERIPK-NMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFYLK 106
            +++   T +   D   N  S++R    K +  F++IN Y G  F      + F     +     +SIIV+    W LY    Y+G  + V+      C+P FY  
Sbjct:  305 WIYGDGTCLDVPDLFNNQASSLRYAGSKADWCFDSINLYYGLYFSGYESEWIFKDTPGLGSVSAQSIIVSGGSAWTLYEGENYQGRAVCVFPDVAGGCQPEFYFD 619
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BLAST of EMLSAG00000005933 vs. C. finmarchicus
Match: gi|592909385|gb|GAXK01048990.1| (TSA: Calanus finmarchicus comp65445_c2_seq6 transcribed RNA sequence)

HSP 1 Score: 33.8834 bits (76), Expect = 3.135e-2
Identity = 15/35 (42.86%), Postives = 17/35 (48.57%), Query Frame = 0 
Query:   70 VAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
            V  C PW LY    Y G  + V+ SS   C PG Y
Sbjct:    1 VTGCSPWTLYESDHYTGSAMCVFPSSSTACTPGLY 105
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BLAST of EMLSAG00000005933 vs. L. salmonis peptides
Match: EMLSAP00000005933 (pep:novel supercontig:LSalAtl2s:LSalAtl2s320:21267:21614:-1 gene:EMLSAG00000005933 transcript:EMLSAT00000005933 description:"augustus_masked-LSalAtl2s320-processed-gene-0.0")

HSP 1 Score: 244.588 bits (623), Expect = 2.032e-84
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 
Query:    1 MEFMFSSTTYILTVDTLENSQSTVRERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFYLKQTGYWSFCR 115
            MEFMFSSTTYILTVDTLENSQSTVRERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFYLKQTGYWSFCR
Sbjct:    1 MEFMFSSTTYILTVDTLENSQSTVRERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFYLKQTGYWSFCR 115
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BLAST of EMLSAG00000005933 vs. L. salmonis peptides
Match: EMLSAP00000000780 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1127:109598:110255:-1 gene:EMLSAG00000000780 transcript:EMLSAT00000000780 description:"snap_masked-LSalAtl2s1127-processed-gene-0.4")

HSP 1 Score: 115.931 bits (289), Expect = 1.976e-33
Identity = 61/103 (59.22%), Postives = 69/103 (66.99%), Query Frame = 0 
Query:   14 VDTLENSQSTVRERI----------PKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFYLK 106
            + TL NSQST  ERI          PKN ++NTI+ Y+GH FM NTQMFDF  GF  Q+G GKS      QPW LYSERGYKGD+I VY SSIE CEP FYL+
Sbjct:   22 IKTLGNSQSTFGERITRSHFYYAGSPKNRTYNTISLYNGHGFMGNTQMFDFSTGFSAQYGDGKS--DKGYQPWNLYSERGYKGDYISVYSSSIEKCEPAFYLE 122
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BLAST of EMLSAG00000005933 vs. L. salmonis peptides
Match: EMLSAP00000003853 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2094:10695:15319:1 gene:EMLSAG00000003853 transcript:EMLSAT00000003853 description:"snap_masked-LSalAtl2s2094-processed-gene-0.1")

HSP 1 Score: 81.2629 bits (199), Expect = 1.127e-19
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 0 
Query:   30 KNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFYLK 106
            +NM ++T+N Y+   FM + Q F F          GKSII+  CQPW LY    Y+GDHI +Y SS +NCEPGFYL+
Sbjct:  122 ENMKYSTLNFYEESGFMGDEQYFYFDNPSLYHDNFGKSIILTGCQPWTLYEHTSYRGDHICIYPSSTQNCEPGFYLE 198

HSP 2 Score: 66.6254 bits (161), Expect = 1.627e-14
Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 0 
Query:   45 FMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
            FM + Q F      F     GKSII+  CQPW LY    Y+GDHI +Y SS +NCEPGF+
Sbjct:  206 FMGDEQYFYLNNPSFYHDNFGKSIILTGCQPWTLYEHTLYRGDHICIYPSSTQNCEPGFF 265
[Close]
BLAST of EMLSAG00000005933 vs. L. salmonis peptides
Match: EMLSAP00000001479 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1251:119741:120448:1 gene:EMLSAG00000001479 transcript:EMLSAT00000001479 description:"augustus_masked-LSalAtl2s1251-processed-gene-0.0")

HSP 1 Score: 77.411 bits (189), Expect = 1.707e-18
Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = 0 
Query:   11 ILTVDTLENSQSTVR-ERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFYLKQTGYWSFC 114
            I +   L  + S+VR     +NM ++TIN Y+G  FM N Q F            G+SIIV  C PW LY ER Y+GD I V  +S + CEPGFY++   +  F 
Sbjct:   96 ISSFGQLNRALSSVRYSGAGENMKYSTINFYEGSGFMGNEQYFYSDTPSLNHDNFGESIIVTGCDPWTLYEERSYRGDRICVXPASTQKCEPGFYIQPQDFGHFV 200
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BLAST of EMLSAG00000005933 vs. L. salmonis peptides
Match: EMLSAP00000003799 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2069:15746:16444:1 gene:EMLSAG00000003799 transcript:EMLSAT00000003799 description:"augustus_masked-LSalAtl2s2069-processed-gene-0.2")

HSP 1 Score: 61.6178 bits (148), Expect = 5.898e-13
Identity = 32/89 (35.96%), Postives = 45/89 (50.56%), Query Frame = 0 
Query:   17 LENSQSTVRER-IPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
             +N  S++R   +  +    +IN Y+   F    + F     +F +   G SIIV  C PW LY E+ + GDHI VY S   NC PGF+
Sbjct:   95 FKNRASSLRNSGVGSSYKDKSINFYEREGFAGEEEYFSNDTPYFRKDNFGDSIIVTGCSPWTLYEEKYFAGDHICVYPSDENNCLPGFF 183
[Close]
BLAST of EMLSAG00000005933 vs. L. salmonis peptides
Match: EMLSAP00000011247 (pep:novel supercontig:LSalAtl2s:LSalAtl2s76:490659:497217:1 gene:EMLSAG00000011247 transcript:EMLSAT00000011247 description:"snap_masked-LSalAtl2s76-processed-gene-5.3")

HSP 1 Score: 59.3066 bits (142), Expect = 3.840e-12
Identity = 33/93 (35.48%), Postives = 52/93 (55.91%), Query Frame = 0 
Query:   22 STVRERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIEN-CEPGFYLKQTGYWSF 113
            S++R    ++++ NT+N Y+G  FM   Q     A        GKSII++ C+PW LY +  + G  I VY +SI + C+PGF+   T + +F
Sbjct:  104 SSIRYSGVEDLNANTLNFYEGPGFMGIEQYVYKDAPKLRYDNFGKSIIISGCKPWTLYEKANFAGKRICVYPASITSPCKPGFFETPTAFGNF 196
[Close]
BLAST of EMLSAG00000005933 vs. L. salmonis peptides
Match: EMLSAP00000004662 (pep:novel supercontig:LSalAtl2s:LSalAtl2s242:809507:810193:1 gene:EMLSAG00000004662 transcript:EMLSAT00000004662 description:"augustus_masked-LSalAtl2s242-processed-gene-8.1")

HSP 1 Score: 58.151 bits (139), Expect = 1.041e-11
Identity = 28/75 (37.33%), Postives = 43/75 (57.33%), Query Frame = 0 
Query:   32 MSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSI--ENCEPGFY 104
            + F+T+N Y    F+ N +M+        +   GKSII+  C+PW L++E  + G+HI +Y  SI   NC PGF+
Sbjct:  113 LQFDTLNFYKEPGFIGNEEMYYQDEAILTRPFFGKSIILTGCKPWTLFNETHFHGEHICIYPRSISSNNCTPGFF 187
[Close]
BLAST of EMLSAG00000005933 vs. L. salmonis peptides
Match: EMLSAP00000011248 (pep:novel supercontig:LSalAtl2s:LSalAtl2s76:503153:524576:1 gene:EMLSAG00000011248 transcript:EMLSAT00000011248 description:"snap_masked-LSalAtl2s76-processed-gene-6.6")

HSP 1 Score: 58.5362 bits (140), Expect = 1.553e-11
Identity = 32/93 (34.41%), Postives = 52/93 (55.91%), Query Frame = 0 
Query:   22 STVRERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIEN-CEPGFYLKQTGYWSF 113
            S++R    ++++ NT+N Y+G  FM   Q     A        GKSII++ C+PW LY +  + G  I VY +S+ + C+PGF+   T + +F
Sbjct:  104 SSIRYSGVEDLNANTLNFYEGPGFMGIEQYVYKDAPKLKYDNFGKSIIISGCKPWTLYEKANFAGKRICVYPASLTSPCKPGFFETPTAFGNF 196
[Close]
BLAST of EMLSAG00000005933 vs. L. salmonis peptides
Match: EMLSAP00000001539 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1268:62804:63481:-1 gene:EMLSAG00000001539 transcript:EMLSAT00000001539 description:"augustus_masked-LSalAtl2s1268-processed-gene-0.1")

HSP 1 Score: 56.225 bits (134), Expect = 5.726e-11
Identity = 34/115 (29.57%), Postives = 55/115 (47.83%), Query Frame = 0 
Query:    1 MEFMFSSTTYILTVDTLENSQSTVRERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCS-SIENCEPGFYLKQTGYWSFC 114
            + +++     I T+  +    S++R     ++  NTIN Y+G  FM   Q     +        GKSII+  C+PW LY +  + G  I VY + S   C+PGF  K + + +F 
Sbjct:   77 VSYVWGRNVQISTLGEINGKVSSIRYSGVDDLFANTINFYEGPGFMGIEQSVQRDSPKLNYDNFGKSIIITGCKPWTLYEKENFGGKKICVYPNFSSTPCKPGFLEKPSAFGNFA 191
[Close]
BLAST of EMLSAG00000005933 vs. L. salmonis peptides
Match: EMLSAP00000003145 (pep:novel supercontig:LSalAtl2s:LSalAtl2s175:564159:564836:1 gene:EMLSAG00000003145 transcript:EMLSAT00000003145 description:"augustus_masked-LSalAtl2s175-processed-gene-5.3")

HSP 1 Score: 54.6842 bits (130), Expect = 2.453e-10
Identity = 32/103 (31.07%), Postives = 52/103 (50.49%), Query Frame = 0 
Query:   13 TVDTLENSQSTVRERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIEN-CEPGFYLKQTGYWSFC 114
            T+  +    S++R     + S NT+N Y+G  FM   Q     +        GKSII+  C+PW LY    + G  I VY +S+ + C+PGF+++ + +  F 
Sbjct:   89 TLGGINGKVSSIRYSGVDDHSANTLNFYEGPGFMGIEQNVYKDSPKLNYDNFGKSIIITGCKPWTLYETENFGGSSICVYPNSMSSPCKPGFFVEPSDFGHFA 191
[Close]
BLAST of EMLSAG00000005933 vs. nr
Match: gi|290561783|gb|ADD38289.1| (Gamma-crystallin A [Lepeophtheirus salmonis])

HSP 1 Score: 81.2629 bits (199), Expect = 1.823e-16
Identity = 38/85 (44.71%), Postives = 50/85 (58.82%), Query Frame = 0 
Query:   30 KNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFYLKQTGYWSFC 114
            +NM ++T+N Y+   FM + Q F F          GKSII+  CQPW LY    Y+GDHI +Y SS +NCEPGFYL+   +  F 
Sbjct:  116 ENMKYSTLNFYEESGFMGDEQYFYFDNPSLYHDNFGKSIILTGCQPWTLYEHTSYRGDHICIYPSSTQNCEPGFYLEPQDFGHFV 200
[Close]
BLAST of EMLSAG00000005933 vs. nr
Match: gi|290561421|gb|ADD38111.1| (Beta-crystallin A1 [Lepeophtheirus salmonis])

HSP 1 Score: 61.6178 bits (148), Expect = 3.441e-9
Identity = 32/89 (35.96%), Postives = 45/89 (50.56%), Query Frame = 0 
Query:   17 LENSQSTVRER-IPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
             +N  S++R   +  +    +IN Y+   F    + F     +F +   G SIIV  C PW LY E+ + GDHI VY S   NC PGF+
Sbjct:   95 FKNRASSLRNSGVGSSYKDKSINFYEREGFAGEEEYFSNDTPYFRKDNFGDSIIVTGCSPWTLYEEKYFAGDHICVYPSDENNCLPGFF 183
[Close]
BLAST of EMLSAG00000005933 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold94_size379870-snap-gene-2.32 (protein:Tk09637 transcript:maker-scaffold94_size379870-snap-gene-2.32-mRNA-1 annotation:"gamma-crystallin a")

HSP 1 Score: 60.8474 bits (146), Expect = 2.696e-12
Identity = 32/93 (34.41%), Postives = 47/93 (50.54%), Query Frame = 0 
Query:   17 LENSQSTVR-ERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFYLKQT 108
             +N  S++R    P    ++TIN Y+G  FM   Q F   A  F    +G+S+IV  C PW +Y    Y+G    +Y S  ENC P F+ + +
Sbjct:  109 FDNRASSIRFAGAPDGYKYDTINFYEGKNFMGLEQFFYDDAPQFNYDNLGRSVIVTGCSPWTIYQYDNYQGYSACLYPSDTENCYPSFFPEPS 201

HSP 2 Score: 58.5362 bits (140), Expect = 1.549e-11
Identity = 31/89 (34.83%), Postives = 44/89 (49.44%), Query Frame = 0 
Query:   17 LENSQSTVR-ERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFY 104
             +N  S++R    P    ++TIN Y+G  FM   Q F   A  F    +G+S+IV  C PW +Y    Y+G    +Y S   NC P F+
Sbjct:  345 FDNKASSIRFSGAPDGYKYDTINFYEGKNFMGLEQFFYDDAPQFNYDNLGRSVIVTGCSPWTIYQYDNYQGYSACLYPSDTANCYPSFF 433
[Close]
BLAST of EMLSAG00000005933 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold94_size379870-snap-gene-2.29 (protein:Tk09638 transcript:maker-scaffold94_size379870-snap-gene-2.29-mRNA-1 annotation:"gamma-crystallin d")

HSP 1 Score: 56.6102 bits (135), Expect = 4.007e-11
Identity = 32/92 (34.78%), Postives = 46/92 (50.00%), Query Frame = 0 
Query:   16 TLENSQSTVR-ERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFYLK 106
            T +N  S++R    P   +++ +  Y G  F+   Q F   A        G+S IV  C PW LYSE  YKG+ I ++ +   NC PGF+ K
Sbjct:  122 TFDNKASSLRFAGAPDGYNYDVLTLYAGDYFIGREQYFYDEAPQLNFAKFGRSAIVNGCSPWTLYSEDNYKGNAICLHPADESNCYPGFFPK 213
[Close]
BLAST of EMLSAG00000005933 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold94_size379870-snap-gene-2.28 (protein:Tk09640 transcript:maker-scaffold94_size379870-snap-gene-2.28-mRNA-1 annotation:"beta-crystallin b1")

HSP 1 Score: 52.373 bits (124), Expect = 1.884e-9
Identity = 31/101 (30.69%), Postives = 46/101 (45.54%), Query Frame = 0 
Query:    9 TYILTVDT-LENSQSTVR-ERIPKNMSFNTINQYDGHKFMANTQMFDFGAGFFVQHGVGKSIIVAVCQPWILYSERGYKGDHIGVYCSSIENCEPGFYLKQ 107
             Y + +D+ ++N  S+VR    P    ++TIN Y+G  FM   Q     A        G+S+IV  C PW  Y    ++G     Y S  + C P F+  Q
Sbjct:  106 NYCVNLDSAMDNKASSVRFSGAPDGYKYDTINLYEGDYFMGMEQFLYDDAYQMNYDNFGRSMIVTGCSPWTAYQYDNFQGYSKCFYPSDTQQCHPAFFTSQ 206
The following BLAST results are available for this feature:
BLAST of EMLSAG00000005933 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005933 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 17
Match NameE-valueIdentityDescription
gi|592805238|gb|GAXK01149330.1|3.853e-627.59TSA: Calanus finmarchicus comp96297_c4_seq1 transc... [more]
gi|592806332|gb|GAXK01148236.1|9.469e-647.50TSA: Calanus finmarchicus comp1026702_c0_seq1 tran... [more]
gi|592909389|gb|GAXK01048986.1|1.322e-529.21TSA: Calanus finmarchicus comp65445_c2_seq2 transc... [more]
gi|592909390|gb|GAXK01048985.1|1.993e-529.21TSA: Calanus finmarchicus comp65445_c2_seq1 transc... [more]
gi|592909384|gb|GAXK01048991.1|3.250e-529.21TSA: Calanus finmarchicus comp65445_c4_seq1 transc... [more]
gi|592953641|gb|GAXK01004912.1|4.344e-546.15TSA: Calanus finmarchicus comp5770152_c0_seq1 tran... [more]
gi|592909388|gb|GAXK01048987.1|1.009e-428.95TSA: Calanus finmarchicus comp65445_c2_seq3 transc... [more]
gi|592766454|gb|GAXK01188114.1|4.645e-323.76TSA: Calanus finmarchicus comp10051_c0_seq1 transc... [more]
gi|592798422|gb|GAXK01156146.1|6.882e-325.71TSA: Calanus finmarchicus comp284306_c0_seq1 trans... [more]
gi|592909385|gb|GAXK01048990.1|3.135e-242.86TSA: Calanus finmarchicus comp65445_c2_seq6 transc... [more]

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BLAST of EMLSAG00000005933 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 13
Match NameE-valueIdentityDescription
EMLSAP000000059332.032e-84100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s320:21267... [more]
EMLSAP000000007801.976e-3359.22pep:novel supercontig:LSalAtl2s:LSalAtl2s1127:1095... [more]
EMLSAP000000038531.127e-1948.05pep:novel supercontig:LSalAtl2s:LSalAtl2s2094:1069... [more]
EMLSAP000000014791.707e-1840.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1251:1197... [more]
EMLSAP000000037995.898e-1335.96pep:novel supercontig:LSalAtl2s:LSalAtl2s2069:1574... [more]
EMLSAP000000112473.840e-1235.48pep:novel supercontig:LSalAtl2s:LSalAtl2s76:490659... [more]
EMLSAP000000046621.041e-1137.33pep:novel supercontig:LSalAtl2s:LSalAtl2s242:80950... [more]
EMLSAP000000112481.553e-1134.41pep:novel supercontig:LSalAtl2s:LSalAtl2s76:503153... [more]
EMLSAP000000015395.726e-1129.57pep:novel supercontig:LSalAtl2s:LSalAtl2s1268:6280... [more]
EMLSAP000000031452.453e-1031.07pep:novel supercontig:LSalAtl2s:LSalAtl2s175:56415... [more]

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BLAST of EMLSAG00000005933 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005933 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005933 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 2
Match NameE-valueIdentityDescription
gi|290561783|gb|ADD38289.1|1.823e-1644.71Gamma-crystallin A [Lepeophtheirus salmonis][more]
gi|290561421|gb|ADD38111.1|3.441e-935.96Beta-crystallin A1 [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000005933 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3
Match NameE-valueIdentityDescription
maker-scaffold94_size379870-snap-gene-2.322.696e-1234.41protein:Tk09637 transcript:maker-scaffold94_size37... [more]
maker-scaffold94_size379870-snap-gene-2.294.007e-1134.78protein:Tk09638 transcript:maker-scaffold94_size37... [more]
maker-scaffold94_size379870-snap-gene-2.281.884e-930.69protein:Tk09640 transcript:maker-scaffold94_size37... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s320supercontigLSalAtl2s320:21267..21614 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s320-processed-gene-0.0
Biotypeprotein_coding
EvidenceIEA
NoteGamma-crystallin A [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000005933 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000005933EMLSAT00000005933-701780Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s320:21267..21614-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000005933-688699 ID=EMLSAG00000005933-688699|Name=EMLSAG00000005933|organism=Lepeophtheirus salmonis|type=gene|length=348bp|location=Sequence derived from alignment at LSalAtl2s320:21267..21614- (Lepeophtheirus salmonis)
ATGGAATTTATGTTTTCTTCCACGACGTATATTTTAACAGTTGATACTTT
GGAAAACTCTCAGTCTACGGTTAGGGAAAGGATACCCAAAAACATGTCAT
TTAACACTATAAATCAGTACGATGGACATAAATTTATGGCTAACACGCAA
ATGTTTGACTTCGGGGCTGGCTTTTTTGTTCAACATGGTGTGGGGAAATC
TATTATTGTTGCAGTATGCCAACCATGGATTTTATATTCAGAAAGAGGAT
ACAAGGGCGATCATATTGGTGTTTACTGTTCCTCTATTGAGAATTGTGAG
CCTGGATTTTATCTTAAACAAACAGGATATTGGTCATTTTGTAGATAA
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