EMLSAG00000006292, EMLSAG00000006292-689058 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000006292
Unique NameEMLSAG00000006292-689058
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000006292 vs. C. finmarchicus
Match: gi|592855429|gb|GAXK01102115.1| (TSA: Calanus finmarchicus comp1137351_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 2.235e-5
Identity = 31/113 (27.43%), Postives = 59/113 (52.21%), Query Frame = 0
Query:   27 IITNFKTIGFMYQEFVEKKTQN--IPELYEYIEDKGSLQIVEFFYHEYRNVLNTNFNHL----------LKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPF 127
            ++T  K+   +Y  F  K+ ++  +P+LY ++  K  L+IV+F   + R+ +  +  HL          +    ++Q AI E+  G     ++F+  RK++SAS +D D IP+
Sbjct: 1050 MLTYNKSPADLYDSFCHKQDRSYTVPQLYSFVR-KAGLEIVKF--SDMRDSVKLDLKHLVVEPEMKSKLMDFDLEHQEAIAELIDGTLHNHNVFLSKRKDTSASLDDNDMIPY 1379          
BLAST of EMLSAG00000006292 vs. L. salmonis peptides
Match: EMLSAP00000006292 (pep:novel supercontig:LSalAtl2s:LSalAtl2s342:184811:185259:-1 gene:EMLSAG00000006292 transcript:EMLSAT00000006292 description:"maker-LSalAtl2s342-snap-gene-2.24")

HSP 1 Score: 270.781 bits (691), Expect = 3.003e-94
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKLSIITNFKTIGFMYQEFVEKKTQNIPELYEYIEDKGSLQIVEFFYHEYRNVLNTNFNHLLKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133
            MQDLIQIVNTGRNLSYQDEIIFGKLSIITNFKTIGFMYQEFVEKKTQNIPELYEYIEDKGSLQIVEFFYHEYRNVLNTNFNHLLKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN
Sbjct:    1 MQDLIQIVNTGRNLSYQDEIIFGKLSIITNFKTIGFMYQEFVEKKTQNIPELYEYIEDKGSLQIVEFFYHEYRNVLNTNFNHLLKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133          
BLAST of EMLSAG00000006292 vs. L. salmonis peptides
Match: EMLSAP00000007230 (pep:novel supercontig:LSalAtl2s:LSalAtl2s405:149523:150842:-1 gene:EMLSAG00000007230 transcript:EMLSAT00000007230 description:"augustus_masked-LSalAtl2s405-processed-gene-1.0")

HSP 1 Score: 90.1225 bits (222), Expect = 4.463e-22
Identity = 57/147 (38.78%), Postives = 88/147 (59.86%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKLSIITNFK-----------------TIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNTNFNHLLKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFF 128
            MQD ++I+   ++L+ +DE+  G++ +  N K                  +GF Y  ++ K+ +   IPELYEYIEDKG L +V F+  +YR  L+    HL K++ + + A+NE+ +GHE KQ IFV  +K+S AS +D+DNIPFF
Sbjct:  164 MQDTLKIMEGNKSLTLKDEVKIGRI-VYNNLKEEDWINVSGLGSEEAKSDVGF-YDLYLNKQDRAFTIPELYEYIEDKGGLHVVNFYGDQYRESLDYCPKHLKKLNTRARYAVNEVIIGHESKQVIFVSKKKSSKASLDDLDNIPFF 308          
BLAST of EMLSAG00000006292 vs. L. salmonis peptides
Match: EMLSAP00000012234 (pep:novel supercontig:LSalAtl2s:LSalAtl2s88:714578:730796:-1 gene:EMLSAG00000012234 transcript:EMLSAT00000012234 description:"maker-LSalAtl2s88-augustus-gene-6.25")

HSP 1 Score: 78.5666 bits (192), Expect = 2.371e-17
Identity = 54/149 (36.24%), Postives = 83/149 (55.70%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKLSIITNFKT---------------IGFMYQEFVEKKTQNIP----ELYEYIE--DKGSLQIVEFFYHEYRNVLNTNFNHLLKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFF 128
            MQ+L++I+N  RNLSY +E+   +L    + +                +GF Y  ++ K  Q++P    ELYEYIE  +K  L++V+F+Y   RN +N    +L K+S++    +NEI  G+E K   FV  + +S AS N+MDNIP F
Sbjct: 1124 MQELLKILNENRNLSYHEEVQRSRLCYNNHLENSWIHMQGIFKEAESDVGF-YDMYLHK--QDLPFTLSELYEYIEQSEKNELKVVDFYYPVQRNWMNQRPAYLNKLSKRKLQIVNEIIYGYENKHIFFVSKKNDSVASLNNMDNIPIF 1269          
BLAST of EMLSAG00000006292 vs. L. salmonis peptides
Match: EMLSAP00000003023 (pep:novel supercontig:LSalAtl2s:LSalAtl2s171:479458:480879:-1 gene:EMLSAG00000003023 transcript:EMLSAT00000003023 description:"augustus_masked-LSalAtl2s171-processed-gene-4.0")

HSP 1 Score: 73.1738 bits (178), Expect = 5.824e-16
Identity = 48/143 (33.57%), Postives = 77/143 (53.85%), Query Frame = 0
Query:    1 MQDLIQIVNTG-RNLSYQDEIIFGKL--------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNTNFNHLLKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIP 126
            MQ+ +QI+N   +N+S Q EI  G++               I    K     Y  ++ K+ Q   IP+LY+++E  G L IV+F+  + R V N +     K++ Q + A+NEI  GH IKQ+IFV  +  ++AS N+ +N+P
Sbjct:  203 MQNTLQILNDNMKNISNQQEIKRGRVIYNNLQENNWVHVSGIFLETKQDPGFYDMYLHKQDQAFTIPDLYKWVEKSGRLHIVDFYDPQQRYVQNRSSEIYKKLTSQQKYAVNEIIYGHSIKQNIFVSRKNKTTASLNNFENVP 345          
BLAST of EMLSAG00000006292 vs. nr
Match: gi|501103046|ref|WP_012152834.1| (methyltransferase [Rickettsia massiliae] >gi|157844358|gb|ABV84859.1| Putative methyltransferase [Rickettsia massiliae MTU5])

HSP 1 Score: 66.2402 bits (160), Expect = 3.715e-10
Identity = 52/160 (32.50%), Postives = 91/160 (56.88%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKLSI----ITNFKTIGF-------------MYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133
            +QDL++++N     S  +E++ GKL +     TN+   G+             +Y  F+ K+ +  ++PELYE++E K SL  V++F    + +L       +F+ L K+ + +++   AI+EI  G+ IK S +V NRK+S AS +D+DNIP+F ++ N
Sbjct:  184 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNYGDVGVYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYFDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNRKDSVASLDDLDNIPYFHNIAN 341          
BLAST of EMLSAG00000006292 vs. nr
Match: gi|504162189|ref|WP_014365771.1| (MULTISPECIES: methyltransferase [spotted fever group] >gi|376334451|gb|AFB31683.1| putative methyltransferase [Rickettsia massiliae str. AZT80] >gi|788110506|gb|KJV78796.1| ubiE/COQ5 methyltransferase family protein [Rickettsia rhipicephali str. Ect])

HSP 1 Score: 66.2402 bits (160), Expect = 3.862e-10
Identity = 52/160 (32.50%), Postives = 91/160 (56.88%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKLSI----ITNFKTIGF-------------MYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133
            +QDL++++N     S  +E++ GKL +     TN+   G+             +Y  F+ K+ +  ++PELYE++E K SL  V++F    + +L       +F+ L K+ + +++   AI+EI  G+ IK S +V NRK+S AS +D+DNIP+F ++ N
Sbjct:  184 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNYGDVGVYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYFDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNRKDSVASLDDLDNIPYFHNIAN 341          
BLAST of EMLSAG00000006292 vs. nr
Match: gi|788125259|gb|KJV93261.1| (methyltransferase domain protein [Rickettsia amblyommatis str. Darkwater])

HSP 1 Score: 62.3882 bits (150), Expect = 7.246e-9
Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKL------------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133
            +QDL++++N     S  +E++ GKL                  S   NF  +G +Y  F+ K+ +  ++PELYE++E K SL  V++     + +L       +F+ L K+ + +++   AI+EI  G+ IK S +V N+K+S AS +D+DNIP+F ++ N
Sbjct:   82 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVG-VYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 239          
BLAST of EMLSAG00000006292 vs. nr
Match: gi|1033122321|ref|WP_064429135.1| (methyltransferase [Rickettsia sp. Tenjiku01])

HSP 1 Score: 62.3882 bits (150), Expect = 8.423e-9
Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKL------------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133
            +QDL++++N     S  +E++ GKL                  S   NF  +G +Y  F+ K+ +  ++PELYE++E K SL  V++     + +L       +F+ L K+ + +++   AI+EI  G+ IK S +V N+K+S AS +D+DNIP+F ++ N
Sbjct:  184 IQDLMKMINKDTK-SRIEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVG-VYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKMLLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 341          
BLAST of EMLSAG00000006292 vs. nr
Match: gi|504205206|ref|WP_014392308.1| (methyltransferase [Rickettsia amblyommatis] >gi|378931282|gb|AFC69791.1| putative methyltransferase [Rickettsia amblyommatis str. GAT-30V])

HSP 1 Score: 62.003 bits (149), Expect = 9.460e-9
Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKL------------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133
            +QDL++++N     S  +E++ GKL                  S   NF  +G +Y  F+ K+ +  ++PELYE++E K SL  V++     + +L       +F+ L K+ + +++   AI+EI  G+ IK S +V N+K+S AS +D+DNIP+F ++ N
Sbjct:  184 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVG-VYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 341          
BLAST of EMLSAG00000006292 vs. nr
Match: gi|796869216|ref|WP_045799431.1| (methyltransferase [Rickettsia amblyommatis])

HSP 1 Score: 62.003 bits (149), Expect = 9.840e-9
Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKL------------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133
            +QDL++++N     S  +E++ GKL                  S   NF  +G +Y  F+ K+ +  ++PELYE++E K SL  V++     + +L       +F+ L K+ + +++   AI+EI  G+ IK S +V N+K+S AS +D+DNIP+F ++ N
Sbjct:  185 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVG-VYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 342          
BLAST of EMLSAG00000006292 vs. nr
Match: gi|796873054|ref|WP_045800343.1| (methyltransferase [Rickettsia amblyommatis] >gi|788092884|gb|KJV62224.1| ubiE/COQ5 methyltransferase family protein [Rickettsia amblyommatis str. Ac/Pa] >gi|922311061|gb|ALA61843.1| methyltransferase [Rickettsia amblyommatis])

HSP 1 Score: 62.003 bits (149), Expect = 9.930e-9
Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKL------------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133
            +QDL++++N     S  +E++ GKL                  S   NF  +G +Y  F+ K+ +  ++PELYE++E K SL  V++     + +L       +F+ L K+ + +++   AI+EI  G+ IK S +V N+K+S AS +D+DNIP+F ++ N
Sbjct:  184 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVG-VYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 341          
BLAST of EMLSAG00000006292 vs. nr
Match: gi|516012332|ref|WP_017442915.1| (methyltransferase [Candidatus Rickettsia gravesii])

HSP 1 Score: 62.003 bits (149), Expect = 9.930e-9
Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKL------------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133
            +QDL++++N     S  +E++ GKL                  S   NF  +G +Y  F+ K+ +  ++PELYE++E K SL  V++     + +L       +F+ L K+ + +++   AI+EI  G+ IK S +V N+K+S AS +D+DNIP+F ++ N
Sbjct:  184 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVG-VYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 341          
BLAST of EMLSAG00000006292 vs. nr
Match: gi|692117344|ref|WP_032074253.1| (methyltransferase [Rickettsia aeschlimannii])

HSP 1 Score: 62.003 bits (149), Expect = 1.052e-8
Identity = 50/160 (31.25%), Postives = 90/160 (56.25%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKLSI----ITNFKTIGF-------------MYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133
            +QDL++++N     S  +E++ GKL +     TN+   G+             +Y  F+ K+ +  ++PELYE++E K SL  V++     + +L       +F+ L K+ + +++   AI+EI  G+ IK S +V N+K+S AS +D+DNIP+F ++ N
Sbjct:  184 IQDLMKMINKDAK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNYGDVGVYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 341          
BLAST of EMLSAG00000006292 vs. nr
Match: gi|951273514|ref|WP_057700083.1| (methyltransferase [Rickettsia rhipicephali] >gi|950800722|gb|ALN41292.1| methyltransferase [Rickettsia rhipicephali])

HSP 1 Score: 62.003 bits (149), Expect = 1.229e-8
Identity = 50/160 (31.25%), Postives = 90/160 (56.25%), Query Frame = 0
Query:    1 MQDLIQIVNTGRNLSYQDEIIFGKLSI----ITNFKTIGF-------------MYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133
            +QDL++++N     S  +E++ GKL +     TN+   G+             +Y  F+ K+ +  ++PELYE++E K SL  V++     + +L       +F+ L K+ + +++   AI+EI  G+ IK S +V N+K+S AS +D+DNIP+F ++ N
Sbjct:  184 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNYGDVGVYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 341          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000006292 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006292 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 1
Match NameE-valueIdentityDescription
gi|592855429|gb|GAXK01102115.1|2.235e-527.43TSA: Calanus finmarchicus comp1137351_c0_seq1 tran... [more]
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BLAST of EMLSAG00000006292 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 4
Match NameE-valueIdentityDescription
EMLSAP000000062923.003e-94100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s342:18481... [more]
EMLSAP000000072304.463e-2238.78pep:novel supercontig:LSalAtl2s:LSalAtl2s405:14952... [more]
EMLSAP000000122342.371e-1736.24pep:novel supercontig:LSalAtl2s:LSalAtl2s88:714578... [more]
EMLSAP000000030235.824e-1633.57pep:novel supercontig:LSalAtl2s:LSalAtl2s171:47945... [more]
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BLAST of EMLSAG00000006292 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006292 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006292 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|501103046|ref|WP_012152834.1|3.715e-1032.50methyltransferase [Rickettsia massiliae] >gi|15784... [more]
gi|504162189|ref|WP_014365771.1|3.862e-1032.50MULTISPECIES: methyltransferase [spotted fever gro... [more]
gi|788125259|gb|KJV93261.1|7.246e-931.68methyltransferase domain protein [Rickettsia ambly... [more]
gi|1033122321|ref|WP_064429135.1|8.423e-931.68methyltransferase [Rickettsia sp. Tenjiku01][more]
gi|504205206|ref|WP_014392308.1|9.460e-931.68methyltransferase [Rickettsia amblyommatis] >gi|37... [more]
gi|796869216|ref|WP_045799431.1|9.840e-931.68methyltransferase [Rickettsia amblyommatis][more]
gi|796873054|ref|WP_045800343.1|9.930e-931.68methyltransferase [Rickettsia amblyommatis] >gi|78... [more]
gi|516012332|ref|WP_017442915.1|9.930e-931.68methyltransferase [Candidatus Rickettsia gravesii][more]
gi|692117344|ref|WP_032074253.1|1.052e-831.25methyltransferase [Rickettsia aeschlimannii][more]
gi|951273514|ref|WP_057700083.1|1.229e-831.25methyltransferase [Rickettsia rhipicephali] >gi|95... [more]

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BLAST of EMLSAG00000006292 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s342supercontigLSalAtl2s342:184811..185259 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s342-snap-gene-2.24
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000006292 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000006292EMLSAT00000006292-702139Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s342:184811..185259-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000006292-689058 ID=EMLSAG00000006292-689058|Name=EMLSAG00000006292|organism=Lepeophtheirus salmonis|type=gene|length=449bp|location=Sequence derived from alignment at LSalAtl2s342:184811..185259- (Lepeophtheirus salmonis)
ATGCAAGATTTAATACAAATAGTGAACACTGGAAGAAATCTCTCGTATCA AGATGAAATTATATTTGGGAAACTGTCCATAATAACAAATTTCAAGACAA TTGGATTTATGTATCAGGAATTTGTAGAGAAGAAAACTCAGAAGTGGGTT TTTATGATATGTATCTCAATAAGCAGGATTGAGTTTTTAGTATACCAGAA TTATACGAATATATAGAAGATAAGGGAAGTCTTCAAATTGTTGAGTTTTT CTATCATGAATATAGAAATGTATTAAATACTAACTTTAATCACCTACTTA AGATGAGTAGACAAAACCAATTGGCTATCAATGAAATAACCTTGGGTCAT GAGATTAAGCAGTCCATATTTGTGTGTAATAGGAAAAATTCTTCAGCTTC ACATAATGACATGGACAATATTCCTTTTTTTTTGTCTCTCGAAAATTAG
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