EMLSAG00000006292, EMLSAG00000006292-689058 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006292 vs. C. finmarchicus
Match: gi|592855429|gb|GAXK01102115.1| (TSA: Calanus finmarchicus comp1137351_c0_seq1 transcribed RNA sequence) HSP 1 Score: 45.0542 bits (105), Expect = 2.235e-5 Identity = 31/113 (27.43%), Postives = 59/113 (52.21%), Query Frame = 0 Query: 27 IITNFKTIGFMYQEFVEKKTQN--IPELYEYIEDKGSLQIVEFFYHEYRNVLNTNFNHL----------LKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPF 127 ++T K+ +Y F K+ ++ +P+LY ++ K L+IV+F + R+ + + HL + ++Q AI E+ G ++F+ RK++SAS +D D IP+ Sbjct: 1050 MLTYNKSPADLYDSFCHKQDRSYTVPQLYSFVR-KAGLEIVKF--SDMRDSVKLDLKHLVVEPEMKSKLMDFDLEHQEAIAELIDGTLHNHNVFLSKRKDTSASLDDNDMIPY 1379
BLAST of EMLSAG00000006292 vs. L. salmonis peptides
Match: EMLSAP00000006292 (pep:novel supercontig:LSalAtl2s:LSalAtl2s342:184811:185259:-1 gene:EMLSAG00000006292 transcript:EMLSAT00000006292 description:"maker-LSalAtl2s342-snap-gene-2.24") HSP 1 Score: 270.781 bits (691), Expect = 3.003e-94 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKLSIITNFKTIGFMYQEFVEKKTQNIPELYEYIEDKGSLQIVEFFYHEYRNVLNTNFNHLLKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133 MQDLIQIVNTGRNLSYQDEIIFGKLSIITNFKTIGFMYQEFVEKKTQNIPELYEYIEDKGSLQIVEFFYHEYRNVLNTNFNHLLKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN Sbjct: 1 MQDLIQIVNTGRNLSYQDEIIFGKLSIITNFKTIGFMYQEFVEKKTQNIPELYEYIEDKGSLQIVEFFYHEYRNVLNTNFNHLLKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133
BLAST of EMLSAG00000006292 vs. L. salmonis peptides
Match: EMLSAP00000007230 (pep:novel supercontig:LSalAtl2s:LSalAtl2s405:149523:150842:-1 gene:EMLSAG00000007230 transcript:EMLSAT00000007230 description:"augustus_masked-LSalAtl2s405-processed-gene-1.0") HSP 1 Score: 90.1225 bits (222), Expect = 4.463e-22 Identity = 57/147 (38.78%), Postives = 88/147 (59.86%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKLSIITNFK-----------------TIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNTNFNHLLKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFF 128 MQD ++I+ ++L+ +DE+ G++ + N K +GF Y ++ K+ + IPELYEYIEDKG L +V F+ +YR L+ HL K++ + + A+NE+ +GHE KQ IFV +K+S AS +D+DNIPFF Sbjct: 164 MQDTLKIMEGNKSLTLKDEVKIGRI-VYNNLKEEDWINVSGLGSEEAKSDVGF-YDLYLNKQDRAFTIPELYEYIEDKGGLHVVNFYGDQYRESLDYCPKHLKKLNTRARYAVNEVIIGHESKQVIFVSKKKSSKASLDDLDNIPFF 308
BLAST of EMLSAG00000006292 vs. L. salmonis peptides
Match: EMLSAP00000012234 (pep:novel supercontig:LSalAtl2s:LSalAtl2s88:714578:730796:-1 gene:EMLSAG00000012234 transcript:EMLSAT00000012234 description:"maker-LSalAtl2s88-augustus-gene-6.25") HSP 1 Score: 78.5666 bits (192), Expect = 2.371e-17 Identity = 54/149 (36.24%), Postives = 83/149 (55.70%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKLSIITNFKT---------------IGFMYQEFVEKKTQNIP----ELYEYIE--DKGSLQIVEFFYHEYRNVLNTNFNHLLKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFF 128 MQ+L++I+N RNLSY +E+ +L + + +GF Y ++ K Q++P ELYEYIE +K L++V+F+Y RN +N +L K+S++ +NEI G+E K FV + +S AS N+MDNIP F Sbjct: 1124 MQELLKILNENRNLSYHEEVQRSRLCYNNHLENSWIHMQGIFKEAESDVGF-YDMYLHK--QDLPFTLSELYEYIEQSEKNELKVVDFYYPVQRNWMNQRPAYLNKLSKRKLQIVNEIIYGYENKHIFFVSKKNDSVASLNNMDNIPIF 1269
BLAST of EMLSAG00000006292 vs. L. salmonis peptides
Match: EMLSAP00000003023 (pep:novel supercontig:LSalAtl2s:LSalAtl2s171:479458:480879:-1 gene:EMLSAG00000003023 transcript:EMLSAT00000003023 description:"augustus_masked-LSalAtl2s171-processed-gene-4.0") HSP 1 Score: 73.1738 bits (178), Expect = 5.824e-16 Identity = 48/143 (33.57%), Postives = 77/143 (53.85%), Query Frame = 0 Query: 1 MQDLIQIVNTG-RNLSYQDEIIFGKL--------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNTNFNHLLKMSRQNQLAINEITLGHEIKQSIFVCNRKNSSASHNDMDNIP 126 MQ+ +QI+N +N+S Q EI G++ I K Y ++ K+ Q IP+LY+++E G L IV+F+ + R V N + K++ Q + A+NEI GH IKQ+IFV + ++AS N+ +N+P Sbjct: 203 MQNTLQILNDNMKNISNQQEIKRGRVIYNNLQENNWVHVSGIFLETKQDPGFYDMYLHKQDQAFTIPDLYKWVEKSGRLHIVDFYDPQQRYVQNRSSEIYKKLTSQQKYAVNEIIYGHSIKQNIFVSRKNKTTASLNNFENVP 345
BLAST of EMLSAG00000006292 vs. nr
Match: gi|501103046|ref|WP_012152834.1| (methyltransferase [Rickettsia massiliae] >gi|157844358|gb|ABV84859.1| Putative methyltransferase [Rickettsia massiliae MTU5]) HSP 1 Score: 66.2402 bits (160), Expect = 3.715e-10 Identity = 52/160 (32.50%), Postives = 91/160 (56.88%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKLSI----ITNFKTIGF-------------MYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133 +QDL++++N S +E++ GKL + TN+ G+ +Y F+ K+ + ++PELYE++E K SL V++F + +L +F+ L K+ + +++ AI+EI G+ IK S +V NRK+S AS +D+DNIP+F ++ N Sbjct: 184 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNYGDVGVYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYFDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNRKDSVASLDDLDNIPYFHNIAN 341
BLAST of EMLSAG00000006292 vs. nr
Match: gi|504162189|ref|WP_014365771.1| (MULTISPECIES: methyltransferase [spotted fever group] >gi|376334451|gb|AFB31683.1| putative methyltransferase [Rickettsia massiliae str. AZT80] >gi|788110506|gb|KJV78796.1| ubiE/COQ5 methyltransferase family protein [Rickettsia rhipicephali str. Ect]) HSP 1 Score: 66.2402 bits (160), Expect = 3.862e-10 Identity = 52/160 (32.50%), Postives = 91/160 (56.88%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKLSI----ITNFKTIGF-------------MYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133 +QDL++++N S +E++ GKL + TN+ G+ +Y F+ K+ + ++PELYE++E K SL V++F + +L +F+ L K+ + +++ AI+EI G+ IK S +V NRK+S AS +D+DNIP+F ++ N Sbjct: 184 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNYGDVGVYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYFDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNRKDSVASLDDLDNIPYFHNIAN 341
BLAST of EMLSAG00000006292 vs. nr
Match: gi|788125259|gb|KJV93261.1| (methyltransferase domain protein [Rickettsia amblyommatis str. Darkwater]) HSP 1 Score: 62.3882 bits (150), Expect = 7.246e-9 Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKL------------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133 +QDL++++N S +E++ GKL S NF +G +Y F+ K+ + ++PELYE++E K SL V++ + +L +F+ L K+ + +++ AI+EI G+ IK S +V N+K+S AS +D+DNIP+F ++ N Sbjct: 82 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVG-VYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 239
BLAST of EMLSAG00000006292 vs. nr
Match: gi|1033122321|ref|WP_064429135.1| (methyltransferase [Rickettsia sp. Tenjiku01]) HSP 1 Score: 62.3882 bits (150), Expect = 8.423e-9 Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKL------------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133 +QDL++++N S +E++ GKL S NF +G +Y F+ K+ + ++PELYE++E K SL V++ + +L +F+ L K+ + +++ AI+EI G+ IK S +V N+K+S AS +D+DNIP+F ++ N Sbjct: 184 IQDLMKMINKDTK-SRIEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVG-VYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKMLLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 341
BLAST of EMLSAG00000006292 vs. nr
Match: gi|504205206|ref|WP_014392308.1| (methyltransferase [Rickettsia amblyommatis] >gi|378931282|gb|AFC69791.1| putative methyltransferase [Rickettsia amblyommatis str. GAT-30V]) HSP 1 Score: 62.003 bits (149), Expect = 9.460e-9 Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKL------------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133 +QDL++++N S +E++ GKL S NF +G +Y F+ K+ + ++PELYE++E K SL V++ + +L +F+ L K+ + +++ AI+EI G+ IK S +V N+K+S AS +D+DNIP+F ++ N Sbjct: 184 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVG-VYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 341
BLAST of EMLSAG00000006292 vs. nr
Match: gi|796869216|ref|WP_045799431.1| (methyltransferase [Rickettsia amblyommatis]) HSP 1 Score: 62.003 bits (149), Expect = 9.840e-9 Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKL------------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133 +QDL++++N S +E++ GKL S NF +G +Y F+ K+ + ++PELYE++E K SL V++ + +L +F+ L K+ + +++ AI+EI G+ IK S +V N+K+S AS +D+DNIP+F ++ N Sbjct: 185 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVG-VYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 342
BLAST of EMLSAG00000006292 vs. nr
Match: gi|796873054|ref|WP_045800343.1| (methyltransferase [Rickettsia amblyommatis] >gi|788092884|gb|KJV62224.1| ubiE/COQ5 methyltransferase family protein [Rickettsia amblyommatis str. Ac/Pa] >gi|922311061|gb|ALA61843.1| methyltransferase [Rickettsia amblyommatis]) HSP 1 Score: 62.003 bits (149), Expect = 9.930e-9 Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKL------------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133 +QDL++++N S +E++ GKL S NF +G +Y F+ K+ + ++PELYE++E K SL V++ + +L +F+ L K+ + +++ AI+EI G+ IK S +V N+K+S AS +D+DNIP+F ++ N Sbjct: 184 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVG-VYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 341
BLAST of EMLSAG00000006292 vs. nr
Match: gi|516012332|ref|WP_017442915.1| (methyltransferase [Candidatus Rickettsia gravesii]) HSP 1 Score: 62.003 bits (149), Expect = 9.930e-9 Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKL------------------SIITNFKTIGFMYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133 +QDL++++N S +E++ GKL S NF +G +Y F+ K+ + ++PELYE++E K SL V++ + +L +F+ L K+ + +++ AI+EI G+ IK S +V N+K+S AS +D+DNIP+F ++ N Sbjct: 184 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVG-VYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 341
BLAST of EMLSAG00000006292 vs. nr
Match: gi|692117344|ref|WP_032074253.1| (methyltransferase [Rickettsia aeschlimannii]) HSP 1 Score: 62.003 bits (149), Expect = 1.052e-8 Identity = 50/160 (31.25%), Postives = 90/160 (56.25%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKLSI----ITNFKTIGF-------------MYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133 +QDL++++N S +E++ GKL + TN+ G+ +Y F+ K+ + ++PELYE++E K SL V++ + +L +F+ L K+ + +++ AI+EI G+ IK S +V N+K+S AS +D+DNIP+F ++ N Sbjct: 184 IQDLMKMINKDAK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNYGDVGVYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 341
BLAST of EMLSAG00000006292 vs. nr
Match: gi|951273514|ref|WP_057700083.1| (methyltransferase [Rickettsia rhipicephali] >gi|950800722|gb|ALN41292.1| methyltransferase [Rickettsia rhipicephali]) HSP 1 Score: 62.003 bits (149), Expect = 1.229e-8 Identity = 50/160 (31.25%), Postives = 90/160 (56.25%), Query Frame = 0 Query: 1 MQDLIQIVNTGRNLSYQDEIIFGKLSI----ITNFKTIGF-------------MYQEFVEKKTQ--NIPELYEYIEDKGSLQIVEFFYHEYRNVLNT-----NFNHLLKMSRQNQL---AINEITLGHEIKQSIFVCNRKNSSASHNDMDNIPFFLSLEN 133 +QDL++++N S +E++ GKL + TN+ G+ +Y F+ K+ + ++PELYE++E K SL V++ + +L +F+ L K+ + +++ AI+EI G+ IK S +V N+K+S AS +D+DNIP+F ++ N Sbjct: 184 IQDLMKMINKDTK-SRVEEVMNGKLILDNLPATNWYKRGWELFSDYQNYGDVGVYDMFLHKQDRAYSVPELYEFVE-KASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNIIKHSFYVSNQKDSVASLDDLDNIPYFHNIAN 341 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006292 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006292 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000006292 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000006292 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006292 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006292 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000006292 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s342:184811..185259- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006292-689058 ID=EMLSAG00000006292-689058|Name=EMLSAG00000006292|organism=Lepeophtheirus salmonis|type=gene|length=449bp|location=Sequence derived from alignment at LSalAtl2s342:184811..185259- (Lepeophtheirus salmonis)back to top Add to Basket
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