EMLSAG00000006647, EMLSAG00000006647-689413 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000006647
Unique Name	EMLSAG00000006647-689413
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of EMLSAG00000006647 vs. GO
Match: - (symbol:SLC44A2 "Choline transporter-like protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral component of membrane" evidence=IEA] Pfam:PF04515 GO:GO:0016021 InterPro:IPR007603 PANTHER:PTHR12385 EMBL:AC011475 HGNC:HGNC:17292 Ensembl:ENST00000586549 Uniprot:K7ESP7)

HSP 1 Score: 52.7582 bits (125), Expect = 2.348e-8
Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 0

Query:   18 TVLCGLHMI--------NMAIDTTFICFCEDCEMNNG-ESKPYFMNVSLMNFVSGNSAKSGKR 71
            TV+ G ++I         M +DT F+CFCED E N+G + +PYFM+  L + +   SA+ GKR
Sbjct:   81 TVIVGSYLIAHGFFSVYGMCVDTLFLCFCEDLERNDGSQERPYFMSPELRDILLKGSAEEGKR 143

[Close]

BLAST of EMLSAG00000006647 vs. GO
Match: - (symbol:slc44a2 "solute carrier family 44 protein member 2" species:44689 "Dictyostelium discoideum" [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] dictyBase:DDB_G0289013 Pfam:PF04515 GO:GO:0016021 EMBL:AAFI02000129 eggNOG:NOG310633 InterPro:IPR007603 PANTHER:PTHR12385 RefSeq:XP_636423.1 STRING:44689.DDBDRAFT_0188210 EnsemblProtists:DDB0266389 GeneID:8626914 KEGG:ddi:DDB_G0289013 OMA:DAYENTI ProtClustDB:CLSZ2728820 Uniprot:Q54I48)

HSP 1 Score: 53.5286 bits (127), Expect = 9.518e-8
Identity = 28/72 (38.89%), Postives = 44/72 (61.11%), Query Frame = 0

Query:    5 FVLFLTKLGIVAPTVLCG-LHMINMAIDTTFICFCEDCEMNNGE-SKPYFMNVSLMNFVSGNSAKSGKRRSK 74
            +++ +  +G +A  +  G + + +M+IDT  +CFCEDCE N+G   +PY+M+ SL  FV       GK RSK
Sbjct:  561 YIIPVILIGFIAFAISTGFMSVYDMSIDTMLLCFCEDCERNDGSPERPYYMSKSLRKFV------DGKGRSK 626

[Close]

BLAST of EMLSAG00000006647 vs. GO
Match: - (symbol:SLC44A5 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0016021 "integral component of membrane" evidence=IEA] Pfam:PF04515 GO:GO:0016021 GeneTree:ENSGT00550000074521 KO:K15377 OMA:IRQRISI InterPro:IPR007603 PANTHER:PTHR12385 TreeFam:TF313325 OrthoDB:EOG7FR7G4 CTD:204962 EMBL:AADN03005533 RefSeq:XP_426673.2 Ensembl:ENSGALT00000018563 GeneID:429117 KEGG:gga:429117 NextBio:20829940 PRO:PR:E1BWG8 Uniprot:E1BWG8)

HSP 1 Score: 46.595 bits (109), Expect = 1.806e-5
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 0

Query:   28 MAIDTTFICFCEDCEMNNGES-KPYFMNVSL 57
            M +DT F+CFCED E N+G + KPYFM+ SL
Sbjct:  669 MCVDTLFLCFCEDLERNDGSTAKPYFMSASL 699

[Close]

BLAST of EMLSAG00000006647 vs. GO
Match: - (symbol:CG11880 species:7227 "Drosophila melanogaster" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150 "biological_process" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] Pfam:PF04515 EMBL:AE014297 GO:GO:0016021 eggNOG:NOG310633 GeneTree:ENSGT00550000074521 KO:K15377 InterPro:IPR007603 PANTHER:PTHR12385 OrthoDB:EOG7FR7G4 RefSeq:NP_651670.1 RefSeq:NP_733268.1 RefSeq:NP_733269.1 UniGene:Dm.10965 BioGrid:68311 MINT:MINT-801158 PaxDb:Q9VAP3 PRIDE:Q9VAP3 EnsemblMetazoa:FBtr0085371 EnsemblMetazoa:FBtr0085372 EnsemblMetazoa:FBtr0085373 GeneID:43440 KEGG:dme:Dmel_CG11880 UCSC:CG11880-RA FlyBase:FBgn0039637 InParanoid:Q9VAP3 OMA:NNENCIC PhylomeDB:Q9VAP3 GenomeRNAi:43440 NextBio:833938 Bgee:Q9VAP3 Uniprot:Q9VAP3)

HSP 1 Score: 45.4394 bits (106), Expect = 3.970e-5
Identity = 22/48 (45.83%), Postives = 30/48 (62.50%), Query Frame = 0

Query:   29 AIDTTFICFCEDCEMNNG-ESKPYFMNVSLMNFV-SGNSAKSGKRRSK 74
            A+DT F+CF EDCE N+G   KP+FM+  LM  +   N+    +RR K
Sbjct:  749 AVDTLFLCFLEDCERNDGSPEKPFFMSKQLMKILGKKNNLPPRQRRGK 796

[Close]

BLAST of EMLSAG00000006647 vs. GO
Match: - (symbol:slc44a1a "solute carrier family 44, member 1a" species:7955 "Danio rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0003674 "molecular_function" evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] Pfam:PF04515 ZFIN:ZDB-GENE-050417-204 GO:GO:0016021 GeneTree:ENSGT00550000074521 InterPro:IPR007603 PANTHER:PTHR12385 OMA:CEDKTIN TreeFam:TF313325 EMBL:BX004781 Ensembl:ENSDART00000011725 PRO:PR:F1Q9M4 Bgee:F1Q9M4 Uniprot:F1Q9M4)

HSP 1 Score: 45.4394 bits (106), Expect = 4.740e-5
Identity = 34/110 (30.91%), Postives = 51/110 (46.36%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGES-KPYFMNVSLMNFVSGNSAKSGKRRSKSITES 79
            VGDFVLFL K+ IV+ T   G+  +N                               + +D  F+CF  D + N+G   + Y+M+ SLM FV  NS K+ ++ SK+  +S
Sbjct:  531 VGDFVLFLGKILIVSCTAFAGVLSLNYQREYSVWVLPLIIVCVFAFLVAHCFLSVFEIVVDVLFLCFAIDTKQNDGSPGREYYMDKSLMEFVE-NSRKATEKYSKAEGDS 639

[Close]

BLAST of EMLSAG00000006647 vs. GO
Match: - (symbol:slc44a4 "solute carrier family 44, member 4" species:7955 "Danio rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0003674 "molecular_function" evidence=ND] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] Pfam:PF04515 ZFIN:ZDB-GENE-040426-1371 GO:GO:0016021 eggNOG:NOG310633 KO:K15377 InterPro:IPR007603 PANTHER:PTHR12385 HOVERGEN:HBG062155 CTD:80736 EMBL:BC054620 RefSeq:NP_956707.1 UniGene:Dr.151382 STRING:7955.ENSDARP00000030718 GeneID:393385 KEGG:dre:393385 NextBio:20814432 Uniprot:Q7T2B0)

HSP 1 Score: 45.0542 bits (105), Expect = 5.602e-5
Identity = 23/54 (42.59%), Postives = 34/54 (62.96%), Query Frame = 0

Query:   18 TVLCGLHMI--------NMAIDTTFICFCEDCEMNNGES-KPYFMNVSLMNFVS 62
            TV+ G ++I        NM +DT F+CF ED E N+G + KPYFM+ +LM  ++
Sbjct:  661 TVVFGAYLIAHGFFSVYNMGVDTLFLCFLEDLERNDGSAEKPYFMSKNLMKILN 714

[Close]

BLAST of EMLSAG00000006647 vs. GO
Match: - (symbol:SLC44A5 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0016021 "integral component of membrane" evidence=IEA] Pfam:PF04515 GO:GO:0016021 GeneTree:ENSGT00550000074521 InterPro:IPR007603 PANTHER:PTHR12385 TreeFam:TF313325 EMBL:AAEX03004899 EMBL:AAEX03004900 Ensembl:ENSCAFT00000032485 Uniprot:F1P6W3)

HSP 1 Score: 43.8986 bits (102), Expect = 9.425e-5
Identity = 20/31 (64.52%), Postives = 23/31 (74.19%), Query Frame = 0

Query:   28 MAIDTTFICFCEDCEMNNGES-KPYFMNVSL 57
            M IDT FICFCED E NNG + KPYF+  +L
Sbjct:  298 MCIDTIFICFCEDMERNNGSTGKPYFIAPTL 328

[Close]

BLAST of EMLSAG00000006647 vs. GO
Match: - (symbol:SLC44A3 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0016021 "integral component of membrane" evidence=IEA] Pfam:PF04515 GO:GO:0016021 GeneTree:ENSGT00550000074521 InterPro:IPR007603 PANTHER:PTHR12385 OrthoDB:EOG72JWFP TreeFam:TF313325 CTD:126969 KO:K15282 EMBL:AADN03005552 RefSeq:XP_422327.3 Ensembl:ENSGALT00000009004 GeneID:424486 KEGG:gga:424486 Uniprot:F1NQQ2)

HSP 1 Score: 44.2838 bits (103), Expect = 9.693e-5
Identity = 30/106 (28.30%), Postives = 49/106 (46.23%), Query Frame = 0

Query:    3 GDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGES-KPYFMNVSLMNFVSGNSAKSGKRRSKSI 76
            G F++FL K+ +V  TV  GL   N                               + +DTTF+CF  D E N+G + KPYF++  L+ FV+ N+  + +++  S+
Sbjct:  534 GGFIIFLGKVFVVCFTVFGGLMAFNYHRELQAWVVPLLLVGFFAYLMSHSFLSVFEVTLDTTFLCFAIDMETNDGSAEKPYFVDQELLMFVNQNNKLTDRQKHGSM 639

[Close]

BLAST of EMLSAG00000006647 vs. GO
Match: - (symbol:SLC44A4 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0016021 "integral component of membrane" evidence=IEA] Pfam:PF04515 GO:GO:0016021 GeneTree:ENSGT00550000074521 KO:K15377 InterPro:IPR007603 PANTHER:PTHR12385 TreeFam:TF313325 OrthoDB:EOG7FR7G4 CTD:80736 OMA:PVNSSCP EMBL:AAEX03008219 RefSeq:XP_538839.3 ProteinModelPortal:F1P9U5 Ensembl:ENSCAFT00000001024 GeneID:481718 KEGG:cfa:481718 Uniprot:F1P9U5)

HSP 1 Score: 43.5134 bits (101), Expect = 1.781e-4
Identity = 20/52 (38.46%), Postives = 33/52 (63.46%), Query Frame = 0

Query:   25 MINMAIDTTFICFCEDCEMNNGES-KPYFMNVSLMNFVS-GNSAKSGKRRSK 74
            +  M +DT F+CF ED E N+G + +PY+M+ +L+  +S  N A  G ++ K
Sbjct:  656 VFGMCVDTLFLCFLEDLERNDGSADRPYYMSKTLLKILSKKNEALPGHKKRK 707

[Close]

BLAST of EMLSAG00000006647 vs. GO
Match: - (symbol:SLC44A5 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0016021 "integral component of membrane" evidence=IEA] Pfam:PF04515 GO:GO:0016021 GeneTree:ENSGT00550000074521 KO:K15377 InterPro:IPR007603 PANTHER:PTHR12385 OrthoDB:EOG7FR7G4 OMA:IYDIGIQ EMBL:AAEX03004899 EMBL:AAEX03004900 RefSeq:XP_005622115.1 Ensembl:ENSCAFT00000032487 GeneID:490208 Uniprot:F1P6W2)

HSP 1 Score: 43.1282 bits (100), Expect = 2.072e-4
Identity = 19/44 (43.18%), Postives = 29/44 (65.91%), Query Frame = 0

Query:   28 MAIDTTFICFCEDCEMNNGES-KPYFMNVSLMNFVSGNSAKSGK 70
            M IDT FICF ED E N+G + +PY+M+ SL+  +   + ++ K
Sbjct:  661 MCIDTIFICFLEDLERNDGSTERPYYMSQSLLKILKEPTVRTKK 704

[Close]

BLAST of EMLSAG00000006647 vs. C. finmarchicus
Match: gi|592771837|gb|GAXK01182731.1| (TSA: Calanus finmarchicus comp849138_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 56.6102 bits (135), Expect = 3.441e-9
Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0

Query:   21 CGLHMINMAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFV--SGNSAKSGKRRSKSITES 79
            C + +  M+IDT F+CFCED   N+G +KPYFM+  LM FV  S  + ++ +RR    +ES
Sbjct: 2181 CFISVYGMSIDTIFLCFCEDSSRNDGINKPYFMSKGLMEFVENSKKALEAAERRKMKQSES 2363

[Close]

BLAST of EMLSAG00000006647 vs. C. finmarchicus
Match: gi|592958541|gb|GAXK01000015.1| (TSA: Calanus finmarchicus comp1143175_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 46.9802 bits (110), Expect = 5.135e-6
Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 0

Query:   21 CGLHMINMAIDTTFICFCEDCEMNNG-ESKPYFMNVSLMNFVSGNSAKSGKRRSKSITES 79
            C   + +MA+DT FICF ED E N+G   KPY+M+ SL   + G   K+ +R +  +  S
Sbjct: 2186 CFFSVYSMAVDTLFICFLEDLERNDGTPEKPYYMSKSLRK-ILGKMEKTARRTNYRLVRS 2362

[Close]

BLAST of EMLSAG00000006647 vs. C. finmarchicus
Match: gi|592958542|gb|GAXK01000014.1| (TSA: Calanus finmarchicus comp1143175_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 46.9802 bits (110), Expect = 5.155e-6
Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 0

Query:   21 CGLHMINMAIDTTFICFCEDCEMNNG-ESKPYFMNVSLMNFVSGNSAKSGKRRSKSITES 79
            C   + +MA+DT FICF ED E N+G   KPY+M+ SL   + G   K+ +R +  +  S
Sbjct: 2231 CFFSVYSMAVDTLFICFLEDLERNDGTPEKPYYMSKSLRK-ILGKMEKTARRTNYRLVRS 2407

[Close]

BLAST of EMLSAG00000006647 vs. C. finmarchicus
Match: gi|592774728|gb|GAXK01179840.1| (TSA: Calanus finmarchicus comp769657_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 6.255e-5
Identity = 25/77 (32.47%), Postives = 40/77 (51.95%), Query Frame = 0

Query:   15 VAPTVL----------CGLHMINMAIDTTFICFCEDCEMNNG-ESKPYFMNVSLMNFVSGN---SAKSGKRRSKSIT 77
            + PT+L          C   +  MAIDT F+CF +D E+N+G   KP++M+  LM  +      S + GK + + I+
Sbjct:   92 ILPTILISMAAYLISSCFFSVYEMAIDTLFLCFLQDSEINDGSREKPFYMSRKLMKILGKKNVGSEEDGKTK*RYIS 322

[Close]

BLAST of EMLSAG00000006647 vs. C. finmarchicus
Match: gi|592871162|gb|GAXK01086400.1| (TSA: Calanus finmarchicus comp479240_c0_seq26 transcribed RNA sequence)

HSP 1 Score: 43.1282 bits (100), Expect = 6.491e-5
Identity = 29/86 (33.72%), Postives = 45/86 (52.33%), Query Frame = 0

Query:   27 NMAIDTTFICFCEDCEMNNGE-SKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQSWLSDSLFR-----EKLENIDLIILLQHL 106
            +MA+DT F+CF ED E N+G  +KPYFM+  L   +        + R+   TE    + LS  + +      KL + DL ++L H+
Sbjct:   50 SMAVDTLFLCFLEDLERNDGSAAKPYFMSRKLKKVLGKMEEPEVQPRNIPTTEF*HLTPLSFCMRKLE*LDAKLVSCDLCLILFHV 307

[Close]

BLAST of EMLSAG00000006647 vs. C. finmarchicus
Match: gi|592871164|gb|GAXK01086398.1| (TSA: Calanus finmarchicus comp479240_c0_seq24 transcribed RNA sequence)

HSP 1 Score: 43.1282 bits (100), Expect = 7.014e-5
Identity = 29/86 (33.72%), Postives = 45/86 (52.33%), Query Frame = 0

Query:   27 NMAIDTTFICFCEDCEMNNGE-SKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQSWLSDSLFR-----EKLENIDLIILLQHL 106
            +MA+DT F+CF ED E N+G  +KPYFM+  L   +        + R+   TE    + LS  + +      KL + DL ++L H+
Sbjct:   50 SMAVDTLFLCFLEDLERNDGSAAKPYFMSRKLKKVLGKMEEPEVQPRNIPTTEF*HLTPLSFCMRKLE*LDAKLVSCDLCLILFHV 307

[Close]

BLAST of EMLSAG00000006647 vs. C. finmarchicus
Match: gi|592854150|gb|GAXK01103394.1| (TSA: Calanus finmarchicus comp60629_c2_seq7 transcribed RNA sequence)

HSP 1 Score: 42.3578 bits (98), Expect = 1.065e-4
Identity = 22/57 (38.60%), Postives = 31/57 (54.39%), Query Frame = 0

Query:   28 MAIDTTFICFCEDCEMNNGE-SKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQS 83
            MA+DT F+CF ED E N+G   KPY+M+ SL   +        + R +S  E   +S
Sbjct:  109 MAVDTLFLCFLEDLERNDGSMEKPYYMSKSLKKILGKMEKTVNESRYRSP*ECIPRS 279

[Close]

BLAST of EMLSAG00000006647 vs. C. finmarchicus
Match: gi|592854143|gb|GAXK01103401.1| (TSA: Calanus finmarchicus comp60629_c5_seq6 transcribed RNA sequence)

HSP 1 Score: 41.9726 bits (97), Expect = 1.163e-4
Identity = 22/57 (38.60%), Postives = 31/57 (54.39%), Query Frame = 0

Query:   28 MAIDTTFICFCEDCEMNNGE-SKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQS 83
            MA+DT F+CF ED E N+G   KPY+M+ SL   +        + R +S  E   +S
Sbjct:  464 MAVDTLFLCFLEDLERNDGSMEKPYYMSKSLKKILGKMEKTVNESRYRSP*ECIPRS 634

[Close]

BLAST of EMLSAG00000006647 vs. C. finmarchicus
Match: gi|592854144|gb|GAXK01103400.1| (TSA: Calanus finmarchicus comp60629_c5_seq5 transcribed RNA sequence)

HSP 1 Score: 42.3578 bits (98), Expect = 1.245e-4
Identity = 22/57 (38.60%), Postives = 31/57 (54.39%), Query Frame = 0

Query:   28 MAIDTTFICFCEDCEMNNGE-SKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQS 83
            MA+DT F+CF ED E N+G   KPY+M+ SL   +        + R +S  E   +S
Sbjct:  714 MAVDTLFLCFLEDLERNDGSMEKPYYMSKSLKKILGKMEKTVNESRYRSP*ECIPRS 884

[Close]

BLAST of EMLSAG00000006647 vs. C. finmarchicus
Match: gi|592854146|gb|GAXK01103398.1| (TSA: Calanus finmarchicus comp60629_c5_seq3 transcribed RNA sequence)

HSP 1 Score: 42.3578 bits (98), Expect = 1.362e-4
Identity = 22/57 (38.60%), Postives = 31/57 (54.39%), Query Frame = 0

Query:   28 MAIDTTFICFCEDCEMNNGE-SKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQS 83
            MA+DT F+CF ED E N+G   KPY+M+ SL   +        + R +S  E   +S
Sbjct:  973 MAVDTLFLCFLEDLERNDGSMEKPYYMSKSLKKILGKMEKTVNESRYRSP*ECIPRS 1143

[Close]

BLAST of EMLSAG00000006647 vs. L. salmonis peptides
Match: EMLSAP00000006647 (pep:novel supercontig:LSalAtl2s:LSalAtl2s367:331768:337748:1 gene:EMLSAG00000006647 transcript:EMLSAT00000006647 description:"snap_masked-LSalAtl2s367-processed-gene-2.5")

HSP 1 Score: 261.922 bits (668), Expect = 6.352e-91
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0

Query:    1 MVGDFVLFLTKLGIVAPTVLCGLHMINMAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQSWLSDSLFREKLENIDLIILLQHLFGAVSGASRDHLTRSMWIHT 126
            MVGDFVLFLTKLGIVAPTVLCGLHMINMAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQSWLSDSLFREKLENIDLIILLQHLFGAVSGASRDHLTRSMWIHT
Sbjct:    1 MVGDFVLFLTKLGIVAPTVLCGLHMINMAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQSWLSDSLFREKLENIDLIILLQHLFGAVSGASRDHLTRSMWIHT 126

[Close]

BLAST of EMLSAG00000006647 vs. SwissProt
Match: gi|74852384|sp|Q54I48.1|CTL2_DICDI (RecName: Full=Choline transporter-like protein 2; AltName: Full=Solute carrier family 44 member 2)

HSP 1 Score: 53.5286 bits (127), Expect = 3.351e-8
Identity = 28/72 (38.89%), Postives = 44/72 (61.11%), Query Frame = 0

Query:    5 FVLFLTKLGIVAPTVLCG-LHMINMAIDTTFICFCEDCEMNNGE-SKPYFMNVSLMNFVSGNSAKSGKRRSK 74
            +++ +  +G +A  +  G + + +M+IDT  +CFCEDCE N+G   +PY+M+ SL  FV       GK RSK
Sbjct:  561 YIIPVILIGFIAFAISTGFMSVYDMSIDTMLLCFCEDCERNDGSPERPYYMSKSLRKFV------DGKGRSK 626

[Close]

BLAST of EMLSAG00000006647 vs. SwissProt
Match: gi|73918930|sp|Q5R5L9.1|CTL2_PONAB (RecName: Full=Choline transporter-like protein 2; AltName: Full=Solute carrier family 44 member 2)

HSP 1 Score: 52.7582 bits (125), Expect = 7.158e-8
Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 0

Query:   18 TVLCGLHMI--------NMAIDTTFICFCEDCEMNNG-ESKPYFMNVSLMNFVSGNSAKSGKR 71
            TV+ G ++I         M +DT F+CFCED E N+G + +PYFM+  L + +   SA+ GKR
Sbjct:  644 TVIVGSYLIAHGFFSVYGMCVDTLFLCFCEDLERNDGSQERPYFMSPELRDILLKGSAEEGKR 706

[Close]

BLAST of EMLSAG00000006647 vs. Select Arthropod Genomes
Match: gb|KXZ75649.1| (CTL-like protein 1 [Tribolium castaneum])

HSP 1 Score: 72.0182 bits (175), Expect = 3.890e-15
Identity = 48/127 (37.80%), Postives = 62/127 (48.82%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQSWLSDSLFREKLENI 97
            VGDFVLFL K+ +VA TVL G  M+                                MAIDT F+CFCEDCE N+G +KPY+M+  LM FV  NS K     S    +  +Q+W      +EK+ +I
Sbjct:  209 VGDFVLFLGKVLVVAATVLIGTKMLQNKEGLQHMWVPLTLAGLFAYFVAHCFMTVYEMAIDTIFLCFCEDCEQNDGIAKPYYMSRGLMEFVE-NSKKV--LESHDCRQKGSQAW------QEKVPSI 326

[Close]

BLAST of EMLSAG00000006647 vs. Select Arthropod Genomes
Match: gb|EFA12126.2| (CTL-like protein 1 [Tribolium castaneum])

HSP 1 Score: 71.2478 bits (173), Expect = 1.018e-14
Identity = 45/114 (39.47%), Postives = 56/114 (49.12%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQSW 84
            VGDFVLFL K+ +VA TVL G  M+                                MAIDT F+CFCEDCE N+G +KPY+M+  LM FV  NS K     S    +  +Q+W
Sbjct:  492 VGDFVLFLGKVLVVAATVLIGTKMLQNKEGLQHMWVPLTLAGLFAYFVAHCFMTVYEMAIDTIFLCFCEDCEQNDGIAKPYYMSRGLMEFVE-NSKKV--LESHDCRQKGSQAW 602

[Close]

BLAST of EMLSAG00000006647 vs. Select Arthropod Genomes
Match: EFX84766.1 (hypothetical protein DAPPUDRAFT_47061, partial [Daphnia pulex])

HSP 1 Score: 67.3958 bits (163), Expect = 2.063e-13
Identity = 35/88 (39.77%), Postives = 43/88 (48.86%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLM 58
            VGDF+LFL K G+V   V  G+ +I                                M IDT FICFCEDCE+NNG+ +PYFM+  LM
Sbjct:  326 VGDFILFLGKAGVVTAVVFVGIELIKDKPGVVYIWTPILVAAIFAYLIAHCFISVFEMCIDTVFICFCEDCEINNGQDQPYFMSRGLM 413

[Close]

BLAST of EMLSAG00000006647 vs. Select Arthropod Genomes
Match: gb|KFM79033.1| (Choline transporter-like protein 2, partial [Stegodyphus mimosarum])

HSP 1 Score: 62.003 bits (149), Expect = 2.610e-13
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 0

Query:   28 MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFV--SGNSAKSG 69
            MAIDT  +CFCEDC+MN+G ++PYFM+ SLM FV  SG SAK G
Sbjct:    1 MAIDTLLLCFCEDCQMNDGITRPYFMSRSLMVFVERSGKSAKIG 44

[Close]

BLAST of EMLSAG00000006647 vs. Select Arthropod Genomes
Match: EEB20145.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 65.855 bits (159), Expect = 9.557e-13
Identity = 37/95 (38.95%), Postives = 47/95 (49.47%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNS 65
            VGDF+LFL K+ +V  TVL G+ ++                                M ID+ F+CFCED EMNNG  KPYFM+  LM FV  N+
Sbjct:  497 VGDFILFLGKVFVVLSTVLIGILILKSKEGVIHVWVPITLAGIFAFIVSHCFITVYEMIIDSIFVCFCEDYEMNNGADKPYFMSKGLMEFVQNNN 591

[Close]

BLAST of EMLSAG00000006647 vs. Select Arthropod Genomes
Match: gb|EEC07124.1| (transporter, putative [Ixodes scapularis])

HSP 1 Score: 65.4698 bits (158), Expect = 1.113e-12
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0

Query:   21 CGLHMINMAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKRRSK 74
            C L +  M IDT F+CFCEDC+MN+G S+PYFM+ +LM FV  NS K+ K  +K
Sbjct:  404 CFLSVYEMTIDTLFLCFCEDCQMNDGISRPYFMSTNLMAFVK-NSRKASKADAK 456

[Close]

BLAST of EMLSAG00000006647 vs. Select Arthropod Genomes
Match: EFX63122.1 (hypothetical protein DAPPUDRAFT_269039 [Daphnia pulex])

HSP 1 Score: 61.6178 bits (148), Expect = 1.193e-12
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0

Query:    6 VLFLTKLGIVAPTVLCGLHMIN-----MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVS 62
            +L + K G+V      G+ +I      M IDT FICFCEDCE+NNG+ +PYFM+  LM FV 
Sbjct:   16 ILTMGKAGVV----FVGIELIKDKPGVMCIDTVFICFCEDCEINNGQDQPYFMSRGLMEFVE 73

[Close]

BLAST of EMLSAG00000006647 vs. Select Arthropod Genomes
Match: EAA01239.5 (AGAP001756-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 63.5438 bits (153), Expect = 6.089e-12
Identity = 39/105 (37.14%), Postives = 50/105 (47.62%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKRRSKS 75
            VGDFVL L K+ +V  T L G+ +I                                M +DT F+CFCEDCE N+G S+PY+M+  LM FV  NS K+     KS
Sbjct:  452 VGDFVLVLAKVFVVVATGLIGVELIQKKVGLHHPYVPLILVGIFAYLVAHCFMTVYEMTVDTIFLCFCEDCESNDGISRPYYMSRGLMEFVQ-NSKKALSIADKS 555

[Close]

BLAST of EMLSAG00000006647 vs. Select Arthropod Genomes
Match: XP_016769756.1 (PREDICTED: choline transporter-like protein 1, partial [Apis mellifera])

HSP 1 Score: 63.1586 bits (152), Expect = 6.607e-12
Identity = 42/109 (38.53%), Postives = 55/109 (50.46%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKRRSKSITES 79
            VGDFVLFL K+ +V  TV+ G+++I                                M IDT FICFCEDCE N+G ++PYFM+  LM FV  NS K+ +  +    ES
Sbjct:  799 VGDFVLFLGKVLVVTLTVVSGIYLIQKKEGLHYPWIPIALAGVFAFIVAHCFISIYEMIIDTIFICFCEDCEKNDGINRPYFMSRGLMEFVE-NSKKALQYANHHAAES 906

[Close]

BLAST of EMLSAG00000006647 vs. Select Arthropod Genomes
Match: gb|EFA01113.1| (CTL-like protein 1 [Tribolium castaneum])

HSP 1 Score: 58.151 bits (139), Expect = 3.542e-10
Identity = 33/89 (37.08%), Postives = 45/89 (50.56%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-----------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFV 61
            VGDFVL ++K+ IV  T+L G  M +                              AIDT F+CFCED  MN+G  +PY+M+V+LM +V
Sbjct:  475 VGDFVLAMSKILIVVATILVGCLMADPTIEHFWAAILISAIVTAIVADCFFAVFETAIDTIFLCFCEDSCMNDGTERPYYMSVNLMQYV 563

[Close]

BLAST of EMLSAG00000006647 vs. nr
Match: gi|942347272|gb|JAN55567.1| (Choline transporter protein 1 [Daphnia magna])

HSP 1 Score: 76.6406 bits (187), Expect = 7.094e-14
Identity = 41/112 (36.61%), Postives = 52/112 (46.43%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQ 82
            VGDF+LFL K G+V   V  G+ +I                                M IDT FICFCEDCE+NNG+ +PYFM+  LM FV    +     RS+S   +  Q
Sbjct:  483 VGDFILFLGKAGVVTAVVFIGIELIKDKPGVVYIWTPILIAAIFAYLIAHCFISVFEMCIDTVFICFCEDCEINNGQDQPYFMSRGLMEFVEKRKSSESACRSRSCPATATQ 594

[Close]

BLAST of EMLSAG00000006647 vs. nr
Match: gi|1022776529|gb|KZS20242.1| (Choline transporter 1-like protein [Daphnia magna])

HSP 1 Score: 73.559 bits (179), Expect = 9.361e-13
Identity = 44/114 (38.60%), Postives = 55/114 (48.25%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKR--RSKSITESFAQ 82
            VGDF+LFL K G+V   V  G+ +I                                M IDT FICFCEDCE+NNG+ +PYFM+  LM FV   S KS +   RS+S   +  Q
Sbjct:  483 VGDFILFLGKAGVVTAVVFIGIELIKDKPGVVYIWTPILIAAIFAYLIAHCFISVFEMCIDTVFICFCEDCEINNGQDQPYFMSRGLMEFVE-KSKKSSESACRSRSCPATATQ 595

[Close]

BLAST of EMLSAG00000006647 vs. nr
Match: gi|1058262190|gb|JAT34580.1| (hypothetical protein g.24598 [Graphocephala atropunctata])

HSP 1 Score: 69.3218 bits (168), Expect = 1.029e-12
Identity = 43/97 (44.33%), Postives = 49/97 (50.52%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAK 67
            VGDFVLFL K+ IV  TVL G+ M                                 M IDT FICFCEDCE+N+G SKPYFM+  LM +V  NS K
Sbjct:   15 VGDFVLFLGKVFIVMITVLIGMKMFENKQGLQHLWVPLAAVALFAALVSHCFITVYEMVIDTIFICFCEDCELNDGISKPYFMSKGLMEYVE-NSKK 110

[Close]

BLAST of EMLSAG00000006647 vs. nr
Match: gi|1004172588|gb|KXZ75649.1| (CTL-like protein 1 [Tribolium castaneum])

HSP 1 Score: 72.0182 bits (175), Expect = 1.903e-12
Identity = 48/127 (37.80%), Postives = 62/127 (48.82%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQSWLSDSLFREKLENI 97
            VGDFVLFL K+ +VA TVL G  M+                                MAIDT F+CFCEDCE N+G +KPY+M+  LM FV  NS K     S    +  +Q+W      +EK+ +I
Sbjct:  209 VGDFVLFLGKVLVVAATVLIGTKMLQNKEGLQHMWVPLTLAGLFAYFVAHCFMTVYEMAIDTIFLCFCEDCEQNDGIAKPYYMSRGLMEFVE-NSKKV--LESHDCRQKGSQAW------QEKVPSI 326

[Close]

BLAST of EMLSAG00000006647 vs. nr
Match: gi|970888763|ref|XP_015109558.1| (PREDICTED: choline transporter-like protein 1 isoform X2 [Diachasma alloeum])

HSP 1 Score: 72.0182 bits (175), Expect = 2.994e-12
Identity = 42/96 (43.75%), Postives = 51/96 (53.12%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAK 67
            VGDFVLFL K+ +VA TVLCG+++I                               M IDT F+CFCEDC  N+G S+PYFM+  LM FV  NS K
Sbjct:  488 VGDFVLFLGKVLVVALTVLCGVYLIQKYGLHHPWVPIAIAGVFAFLVAHCFISIYEMIIDTIFLCFCEDCARNDGISRPYFMSRGLMEFVE-NSKK 582

[Close]

BLAST of EMLSAG00000006647 vs. nr
Match: gi|970888755|ref|XP_015109554.1| (PREDICTED: choline transporter-like protein 1 isoform X1 [Diachasma alloeum] >gi|970888757|ref|XP_015109555.1| PREDICTED: choline transporter-like protein 1 isoform X1 [Diachasma alloeum] >gi|970888759|ref|XP_015109556.1| PREDICTED: choline transporter-like protein 1 isoform X1 [Diachasma alloeum] >gi|970888761|ref|XP_015109557.1| PREDICTED: choline transporter-like protein 1 isoform X1 [Diachasma alloeum])

HSP 1 Score: 71.633 bits (174), Expect = 4.006e-12
Identity = 42/97 (43.30%), Postives = 51/97 (52.58%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAK 67
            VGDFVLFL K+ +VA TVLCG+++I                                M IDT F+CFCEDC  N+G S+PYFM+  LM FV  NS K
Sbjct:  488 VGDFVLFLGKVLVVALTVLCGVYLIQKKYGLHHPWVPIAIAGVFAFLVAHCFISIYEMIIDTIFLCFCEDCARNDGISRPYFMSRGLMEFVE-NSKK 583

[Close]

BLAST of EMLSAG00000006647 vs. nr
Match: gi|1008456867|ref|XP_015840367.1| (PREDICTED: choline transporter-like protein 1 [Tribolium castaneum] >gi|1008456869|ref|XP_015840368.1| PREDICTED: choline transporter-like protein 1 [Tribolium castaneum] >gi|1008456871|ref|XP_015840369.1| PREDICTED: choline transporter-like protein 1 [Tribolium castaneum] >gi|1004172589|gb|EFA12126.2| CTL-like protein 1 [Tribolium castaneum])

HSP 1 Score: 71.2478 bits (173), Expect = 4.981e-12
Identity = 45/114 (39.47%), Postives = 56/114 (49.12%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQSW 84
            VGDFVLFL K+ +VA TVL G  M+                                MAIDT F+CFCEDCE N+G +KPY+M+  LM FV  NS K     S    +  +Q+W
Sbjct:  492 VGDFVLFLGKVLVVAATVLIGTKMLQNKEGLQHMWVPLTLAGLFAYFVAHCFMTVYEMAIDTIFLCFCEDCEQNDGIAKPYYMSRGLMEFVE-NSKKV--LESHDCRQKGSQAW 602

[Close]

BLAST of EMLSAG00000006647 vs. nr
Match: gi|1069800176|ref|XP_018324650.1| (PREDICTED: choline transporter-like protein 1 [Agrilus planipennis])

HSP 1 Score: 71.2478 bits (173), Expect = 6.073e-12
Identity = 43/113 (38.05%), Postives = 57/113 (50.44%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKRRSKSITESFAQS 83
            VGDFVLFL K+ +V  TV+ G+  +                                MAIDT FICFCEDCE N+G S+PY+M+  LM+FV  NS K+ +  S     + +QS
Sbjct:  519 VGDFVLFLGKVIVVMATVVLGIQFLQNKEGVQHIWAILTVCGVFAFFVSHCFLTVYEMAIDTIFICFCEDCEQNDGLSRPYYMSRDLMHFVE-NSKKALRALSSEREAAHSQS 630

[Close]

BLAST of EMLSAG00000006647 vs. nr
Match: gi|1058086512|gb|JAS46915.1| (hypothetical protein g.24070, partial [Cuerna arida] >gi|1058092282|gb|JAS49800.1| hypothetical protein g.24069, partial [Cuerna arida])

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-12
Identity = 42/97 (43.30%), Postives = 48/97 (49.48%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAK 67
            VGDFVLFL K+ +V  TVL G  M                                 M IDT FICFCEDCE+N+G SKPYFM+  LM +V  NS K
Sbjct:   53 VGDFVLFLGKVFVVLTTVLIGTKMFEHKQGLQHVWVPLALVALFAALVSHCFITVYEMVIDTIFICFCEDCELNDGISKPYFMSKGLMEYVE-NSKK 148

[Close]

BLAST of EMLSAG00000006647 vs. nr
Match: gi|861605257|gb|KMQ84327.1| (choline transporter-like protein 1 protein [Lasius niger])

HSP 1 Score: 68.5514 bits (166), Expect = 8.741e-12
Identity = 40/101 (39.60%), Postives = 53/101 (52.48%), Query Frame = 0

Query:    2 VGDFVLFLTKLGIVAPTVLCGLHMIN-------------------------------MAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKSGKR 71
            VGDFVLFL K+ +V  TVL G++++                                M IDT F+CFCEDCE N+G S+PYFM+  LM FV  NS K+ ++
Sbjct:   96 VGDFVLFLGKVLVVTLTVLAGIYLMQKKEGLNHPWIPITLAGIFAFLVAHCFISIYEMIIDTIFLCFCEDCEKNDGISRPYFMSRGLMEFVE-NSKKALRQ 195

[Close]

BLAST of EMLSAG00000006647 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold590_size129399-snap-gene-0.32 (protein:Tk08099 transcript:maker-scaffold590_size129399-snap-gene-0.32-mRNA-1 annotation:"choline transporter-like protein 1")

HSP 1 Score: 59.6918 bits (143), Expect = 1.087e-11
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 0

Query:   23 LHMINMAIDTTFICFCEDCEMNNGESKPYFMNVSLMNFVSGNSAKS 68
            L +  M IDT F+CFCEDC+ N+G ++PYFM+  LM FV  NS KS
Sbjct:  778 LFLFQMTIDTIFLCFCEDCDQNDGIARPYFMSKGLMEFVD-NSRKS 822

The following BLAST results are available for this feature:

BLAST of EMLSAG00000006647 vs. GO
BLAST of EMLSAG00000006647 vs. C. finmarchicus
BLAST of EMLSAG00000006647 vs. L. salmonis peptides
BLAST of EMLSAG00000006647 vs. SwissProt
BLAST of EMLSAG00000006647 vs. Select Arthropod Genomes
BLAST of EMLSAG00000006647 vs. nr
BLAST of EMLSAG00000006647 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000006647 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 17


Match Name	E-value	Identity	Description
-	2.348e-8	41.27	symbol:SLC44A2 "Choline transporter-like protein 2...	[more]
-	9.518e-8	38.89	symbol:slc44a2 "solute carrier family 44 protein m...	[more]
-	1.806e-5	61.29	symbol:SLC44A5 "Uncharacterized protein" species:9...	[more]
-	3.970e-5	45.83	symbol:CG11880 species:7227 "Drosophila melanogast...	[more]
-	4.740e-5	30.91	symbol:slc44a1a "solute carrier family 44, member ...	[more]
-	5.602e-5	42.59	symbol:slc44a4 "solute carrier family 44, member 4...	[more]
-	9.425e-5	64.52	symbol:SLC44A5 "Uncharacterized protein" species:9...	[more]
-	9.693e-5	28.30	symbol:SLC44A3 "Uncharacterized protein" species:9...	[more]
-	1.781e-4	38.46	symbol:SLC44A4 "Uncharacterized protein" species:9...	[more]
-	2.072e-4	43.18	symbol:SLC44A5 "Uncharacterized protein" species:9...	[more]

Pages

BLAST of EMLSAG00000006647 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 19


Match Name	E-value	Identity	Description
gi\|592771837\|gb\|GAXK01182731.1\|	3.441e-9	44.26	TSA: Calanus finmarchicus comp849138_c0_seq1 trans...	[more]
gi\|592958541\|gb\|GAXK01000015.1\|	5.135e-6	40.00	TSA: Calanus finmarchicus comp1143175_c0_seq2 tran...	[more]
gi\|592958542\|gb\|GAXK01000014.1\|	5.155e-6	40.00	TSA: Calanus finmarchicus comp1143175_c0_seq1 tran...	[more]
gi\|592774728\|gb\|GAXK01179840.1\|	6.255e-5	32.47	TSA: Calanus finmarchicus comp769657_c0_seq1 trans...	[more]
gi\|592871162\|gb\|GAXK01086400.1\|	6.491e-5	33.72	TSA: Calanus finmarchicus comp479240_c0_seq26 tran...	[more]
gi\|592871164\|gb\|GAXK01086398.1\|	7.014e-5	33.72	TSA: Calanus finmarchicus comp479240_c0_seq24 tran...	[more]
gi\|592854150\|gb\|GAXK01103394.1\|	1.065e-4	38.60	TSA: Calanus finmarchicus comp60629_c2_seq7 transc...	[more]
gi\|592854143\|gb\|GAXK01103401.1\|	1.163e-4	38.60	TSA: Calanus finmarchicus comp60629_c5_seq6 transc...	[more]
gi\|592854144\|gb\|GAXK01103400.1\|	1.245e-4	38.60	TSA: Calanus finmarchicus comp60629_c5_seq5 transc...	[more]
gi\|592854146\|gb\|GAXK01103398.1\|	1.362e-4	38.60	TSA: Calanus finmarchicus comp60629_c5_seq3 transc...	[more]

Pages

BLAST of EMLSAG00000006647 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAP00000006647	6.352e-91	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s367:33176...	[more]

BLAST of EMLSAG00000006647 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
gi\|74852384\|sp\|Q54I48.1\|CTL2_DICDI	3.351e-8	38.89	RecName: Full=Choline transporter-like protein 2; ...	[more]
gi\|73918930\|sp\|Q5R5L9.1\|CTL2_PONAB	7.158e-8	41.27	RecName: Full=Choline transporter-like protein 2; ...	[more]

BLAST of EMLSAG00000006647 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 11


Match Name	E-value	Identity	Description
gb\|KXZ75649.1\|	3.890e-15	37.80	CTL-like protein 1 [Tribolium castaneum]	[more]
gb\|EFA12126.2\|	1.018e-14	39.47	CTL-like protein 1 [Tribolium castaneum]	[more]
EFX84766.1	2.063e-13	39.77	hypothetical protein DAPPUDRAFT_47061, partial [Da...	[more]
gb\|KFM79033.1\|	2.610e-13	65.91	Choline transporter-like protein 2, partial [Stego...	[more]
EEB20145.1	9.557e-13	38.95	conserved hypothetical protein [Pediculus humanus ...	[more]
gb\|EEC07124.1\|	1.113e-12	55.56	transporter, putative [Ixodes scapularis]	[more]
EFX63122.1	1.193e-12	48.39	hypothetical protein DAPPUDRAFT_269039 [Daphnia pu...	[more]
EAA01239.5	6.089e-12	37.14	AGAP001756-PA [Anopheles gambiae str. PEST]	[more]
XP_016769756.1	6.607e-12	38.53	PREDICTED: choline transporter-like protein 1, par...	[more]
gb\|EFA01113.1\|	3.542e-10	37.08	CTL-like protein 1 [Tribolium castaneum]	[more]

Pages

BLAST of EMLSAG00000006647 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|942347272\|gb\|JAN55567.1\|	7.094e-14	36.61	Choline transporter protein 1 [Daphnia magna]	[more]
gi\|1022776529\|gb\|KZS20242.1\|	9.361e-13	38.60	Choline transporter 1-like protein [Daphnia magna]	[more]
gi\|1058262190\|gb\|JAT34580.1\|	1.029e-12	44.33	hypothetical protein g.24598 [Graphocephala atropu...	[more]
gi\|1004172588\|gb\|KXZ75649.1\|	1.903e-12	37.80	CTL-like protein 1 [Tribolium castaneum]	[more]
gi\|970888763\|ref\|XP_015109558.1\|	2.994e-12	43.75	PREDICTED: choline transporter-like protein 1 isof...	[more]
gi\|970888755\|ref\|XP_015109554.1\|	4.006e-12	43.30	PREDICTED: choline transporter-like protein 1 isof...	[more]
gi\|1008456867\|ref\|XP_015840367.1\|	4.981e-12	39.47	PREDICTED: choline transporter-like protein 1 [Tri...	[more]
gi\|1069800176\|ref\|XP_018324650.1\|	6.073e-12	38.05	PREDICTED: choline transporter-like protein 1 [Agr...	[more]
gi\|1058086512\|gb\|JAS46915.1\|	7.294e-12	43.30	hypothetical protein g.24070, partial [Cuerna arid...	[more]
gi\|861605257\|gb\|KMQ84327.1\|	8.741e-12	39.60	choline transporter-like protein 1 protein [Lasius...	[more]

Pages

BLAST of EMLSAG00000006647 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1


Match Name	E-value	Identity	Description
maker-scaffold590_size129399-snap-gene-0.32	1.087e-11	56.52	protein:Tk08099 transcript:maker-scaffold590_size1...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s367	supercontig	LSalAtl2s367:331768..337748 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	snap_masked-LSalAtl2s367-processed-gene-2.5
Biotype	protein_coding
Evidence	IEA
Note	Choline transporter-like protein 2

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000006647 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000006647	EMLSAT00000006647-702494	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s367:331768..337748+

gene from alignment at LSalAtl2s367:331768..337748+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000006647-689413 ID=EMLSAG00000006647-689413|Name=EMLSAG00000006647|organism=Lepeophtheirus salmonis|type=gene|length=5981bp|location=Sequence derived from alignment at LSalAtl2s367:331768..337748+ (Lepeophtheirus salmonis)
ATGGTCGGGGACTTTGTTCTATTTTTAACAAAGTTGGGTATTGTTGCACC
AACCGTTTTATGTGGGCTTCATATGATAAATGTAYGTACATATTAGTTTT
ATTTATTACACAAGGTGTAAAAATAAATTTTTAGGTTTTGCATCTAATTC
TTGAATTAAATAGTTTTAAAAAAATCTATGTAATTGAATGAATACCATTT
TTTTCTAAGAAAATAAACAACTAAGGCACTAACGGTCTTAAAACATACTT
TTTTGCAGTTATTTTTTTGTTTATTTTTTACTCATTAAATCACCCAAAGA
GYACTTCATACTATGGAACACGCACTATTTTCCCCTTTCTTCTTTGACTA
ACTAAAGACTAATTTTCTATTAGTGAGAGAATTGAGTTAAAACAATCGTA
TCTTAAGGAATTAGAATAACTTTTTTATTCATTATTATTCTCATAATATA
AAAGATCAGGCTACAAAGTTATTTAAATTTCTTAAGACATTCTTAACAAG
ATTTTTTTAATTCAATTCCCCCTTTCATTTCACTTCAAGTTATTTTTCTC
TATAAATTTGAACTATACTCAAGTTTGCAACGAAACTAGATACGGTGGAA
GTAAATATAGTTTTCGAAATAAATATAAAACCATTGAGGAATCAAATAAG
TTTATTCAACTATTAAATAGGTAAAAAAAAAAGATGTGTTATTCTTTGGT
GAATAGAGGCCCTAAAAAAAGAGAATTTGACTATTTGTAGATTGAGTTTA
CTTTTACTCTAGACTGTCTCACAACAAATATTACCAAATATTTTAAATTA
ACATTATATTTTAGAGTAAATGTGTTTATTATTGAGCGGAATTAGACTAT
TTCTCTTATTCAAAACTTCAGACAAACTCATAATATGTTATAAGTATTAG
AAAATTATCAAAAAAACGATATTAATTACACTAGTTCTCAAAATGTAAAC
TTTTTTGCATTTGGATTGAGATGGTGTGTTCCTGAACTATTCAAGTAACA
TGGAAATAACATTTATTGCCCGAATTTTTTGGTTTTTTGGTCCACAAAAA
TGTTTTTTTTTTAAATATTTTTGCAAACATTTATATCATTAAGTCTTATT
TGTAGCCTTGAAATATGTAAATAAAGAAAAACCGTAAAATATAGTTTCTA
GATACATGTTTCCAGACTCTAAACTTTTAATGTAATAAGTATCGTAGTTT
GTATTGAGTAAATACAAAAAATAGACCTTTTCTATAATAGTATAATAAAT
TCCTCATTTTTGATAAGAATGCTGAAAGTTCTAAATTGTCGTAAAGTGAA
GGTATACAACTTCGTGATAAAAAACATCTCTAAAAAGTTATTTTAACCAT
CAGTAACATACTCTTTCAATTTAAGGAAAAACATTTATTGTAAGGCTTAT
CAATAGACTCGTGATCAACACGTCCAGATATTACAACAATTAGAAATTAA
ACCTGTATAATATTTTCGATAAAGTAAAAAATTTATAACTTGTCTAATGA
ATATTATCATGTATTCCCTTAAACTAATTTTATTTCGATTTCTATAGAAA
GACTCTTCTCATGAATGGATAAGCCGCCATATTTGGGCTCCAGTGGGATT
AGGTGGCATTTTTTCATATATAATCGCGTGTTGTTTTATATCCGTCTATG
AGGTAAGAATTATATTTGAAACATAAATGTCACTTTTATTTTTATGTACA
TACAAATACCAATTAAAACTCAAATACATATATTGAATCTAATCTTGTAA
CTATCAAATTATTGTTTTTAGTAAAGTTAGTAAATTTTGAATGCTCCAAA
TTCAATTAGAGTAGTCACATGGATTACGAATCTGTAATTTTTTTTTTTTT
TCAAATCTGGTTCTTAAGACTTTTTATTATAATTTTTTTGAGTAATCTTT
TAGTTTTGAGCGATTTTTTTTAAAAAGAAAAAACCAAAAATCCACATAAA
AGTTACTTTATTATTTAGAATAAGTTATAGTAATTTCAAATATTTGATTA
TATTTTATATGCAATTATCCAATATAATTTAAAAATTAAAACCCGTTGTA
CTAGATTTTTTAATAAGAAGGGTTTTATTTGAAATGGAATAACGTATCAA
ATTATCATTTTTTTTGCTTTAAAAGAATATATTTGAAGTAAGAATAAGAC
TATGCAATAAAATGTTGGCCTTGGAACTCCCACCGGCTAACACCCACATA
TGTTACTGTTACTTAATCTGTAGAACACGAAAACGAGCATTAAAACCTTC
AACCACTATAGTTTGAAGTTTGTGAAAGCCTTATCACAATTATACCTAAA
TTACTTCTTTGTCTTTTGAAAAAGTCATATTTTGTTAACTTGTTCAATAA
TATGATAGTAGTATTGGAAATAAAATAAAAAAACTGTGCAGATTGCCAAC
TCCATTTTTTTACACGATTGTATGCACAAAATTTACAATTCCAGTTATAC
TGATAGACATGAGGCACGATGTAGTATTATTTTATTTCACTTTTTTGTTC
TTACTATTTCTAAAGGCTATTTAGTAAAAATCACTCAAAGTATTTTTTTA
TTTTTAAAGGAAATTTGTATTCTTCATGACTTTGAATAAATTCATCTTTA
AATGAAATAAAAGTAGAGCTCTTTAAATATTACTTAACTGTTTTTACATT
TTTCACTTCACTTTTTTGTTTTTTTTTACAAACATAACAATCAAATAATA
ATATCCTAATAGGATCCGAAAAAAAACTGGGTTTTACTCCCAAATGTTTT
TACTCAGAATTTAGTAAACAAAGTGACATTTTTGTTAATTTTTTTTTTTT
TCAGGATAAATTTTAAATTACTTTTTTTATTGTAAAACAAAAATTTGATC
AATTTCTTACATAATATTGTAGAAAAACAATTTAGATATTTTTTTTATAA
CAACAATCACTACATTTAATTATAATACTTTTTTAAACTAAATTAAGCAT
TTTTATTTACAAAAAAGTATCCATGATCAACAAATTTTGTACATGAGTTA
GAAATCATTGATATCATAGAAAAATACTTGAGTAACTTTATGTATTTAAG
GCTGTTTATTTATCTTTTCAGATGGCAATCGACACAACTTTTATATGTTT
CTGCGAAGACTGTGAAATGAATAATGGAGAGAGTAAACCTTATTTTATGA
ATGTCAGTCTTATGGTAAGCATATGAAGCTGTTTCTTCACTCTAATACTA
GGATTGAAAGGCTAACGTATTCACAGCATCCTCAAGTCTAACACATTTTC
AATCTATATCATACTCTTAAGCTACAAGTTGCATCATGTCTATCAATAAT
CAAAAAAGTTCAAAGTGGTTAATTTAGAACCACAATGTTTTGAAAGGGAA
AACTCAATTTATGTCATACTCACCTTAAAACAGTCTGAAAGGCCCGTATA
ATGTTCGCTCTTAAGTCGAAGACTATTTAATTATTATTGATTAATCTAAG
CTTATTTAAGAAGTTGGGAGCACGGTCGAATTAAACTGACGATGTCACGT
TGTAACATTAAAATTTATCCCCAAACTGATTTTTAAACTTTATACTCCTC
TATATCTTAATTATTTTTTTTTATTTGTGTTGAAAGCATTTTTACATGAC
GTCATCCTTCTTTAAGTTGGCTATATTGTAAGCATAAAACTTTAATTGAA
TTAAAGGCCTATTTCTATACGACAGTACAGCTTTTACCTTCTGGAAGCCA
TTTAGATAAATAAAAAGTTTTTTTCCATTTTTGAAATAACTACGTAATAT
CAACAATTTTGCTAATCGACATGACGTCATTTCGTTTAACTACACAATAT
TGCACGTCAATGAATACGCTCTCTTCGATTTAATTATAACAATAACTTAT
TTATTCTAATTATGTATAGAATTTTGTATCTGGAAACTCGGCTAAATCAG
GAAAACGAAGATCCAAAAGCATCACAGAGGTACGTCCCATCTAGCAATGA
CAAACCTGTTGGATACCTTCTTATCTAGAGATATTTTTACATTATCAAAG
TTTGATAAAGTTATATTTTAAAACGAGTTTTTAAGATCTATTAAATATAA
ATAAAGTTATACTACATAAACCCATGTAAAAATCTGAGTTTTCTTTAGCC
ACCAAATCATTGGTTTCCCTCAAATTTATGAAACAAATGCCAAACAATAA
CCACCTGATAATTTTTCTCCAACCTTACTTAGCTAAAAACGTAATCTTCT
ATTCTTTAGGGATGTTAAGTACAGGTGTAATCTTATTTAGCGTTACACAT
TTTGTTATTTTCAATCCGAAATGACATTGTTGCAAAATGACAAAGGAGGA
CAAAAAGAAACCTTATCACTGAACAGGGTAAGCTGAGATGGTTGGAAGGA
GGAAAGAAGATTCTAAATTTTATCGACAAATTTTTTTATGCTCTAAATTT
TTTACTATTTTTCGATTAAATGTCCCATTAACAACGTCAGATCATTGGTG
TAAAGATCAATTAAATGATACGGGTTTGTTGACGAAAAGGGAGTGAGTGA
CACTTTAAGTTGTTTTTTTCTTTCTTTTGGGATAAATTGCTTTGACTGAC
GAGCTCCATCAAGAACCCTATTTAACACGTATGTCAAGGTATTACTAAAT
ATTATTTTATCACTGGGGTATTCTAATTTCAATTTCAGTTTAAGGAAAGA
AGTTGATTAGTTACCTATTTTTTAGACCATTAAAGTTGAATATCATTTCA
CTGATTGGAATTGAGATTTTTCACTGACATTATGAATAGCATCATAATTG
AAGAAAACGACCCATTGAAGGCTCATGGCTGATATTTTTACTCCATAAAA
TTTACAAATTTTCACTAAATCTTCATGAAACTTCATCTGGTGTTTTTAAG
AATAAGAAAGACTTAAAACCTTAATTGAATGCTACTTGATACGAAAGATA
AAAACGAATATTTGAATTTAGTCGAAATAATATGTACTAAAAAGTTTAGA
TTTGTACTTTTATTTTTTATTTTTTTATCCATTAGGAACGAGAAAAGTAA
AATACTCCCAGAAAAATATTTTATCCTTTCCATTGTAATAGTTCAGTCTT
ATCTGCAATATGGAAATAAGATTGTAAAACGATATTCTTAGGAGATATTA
GGGTGAAATATGTAATAAAACTAGACAAATTTGATAGACACTACGGATTA
AATCCTTTTATTTGTTGGTCCCTTTTAGATATCAAATGGTCCACTATTTT
CATGAATATTAATGAAAAAGTGTGACATTCTTATAAAACTTGGTTGTTTA
GGCCTCCAAAAAGGACAAAATAAAAAAGATGGCGTCACATGAAAACTAAC
TCGCCAACTTTTATGCAAGAAAAATCAACATAATTGAAGTTATATTATAC
TCTTTTTATCAGCTGATATCGTTGATCAATCATTCGTGCATCTTGTTACC
TGTATGAATTTCTTTCTTAAGGATTTACGCTTTTAATTGATTTAACTAGG
TAAATTCTTGGAAGGGAAGAGGGAATTSCAAACTTCACGAGAAAAAAAGA
TAAAGTATCGTCATCTGTGGTATCTCAAAAGCATCATCTAGGTAGGGGCG
GGGGGAGTTTTAAACATAAGACATTTTTTGGTGTTTATTGCGTGTCCATT
TAATATATATTTTTCCGGAAAAGAACATATATCTATTTTATATAAACATC
TAGAAAAACAATCGTTCACAAGACAAAAAGGTTACATCAATAAATAATAA
CTAAAACTAGTCACTATATGACTCCCCCCCCCCCCCCCCCCCACTACACA
CACACAAAAAATTATATTGATAAGATGTATGAATAATAAAGAGAATCAGC
CCTCTTATTAAATATCACTTTTCCCTTTGTTTAGTCCTTTGCACAATCAT
GGTTAAGTGACAGCCTTTTTAGAGAGAAACTTGAAAACATAGATTTGATC
ATTTTGCTTCAACACCTTTTTGGGGCCGTATCAGGAGCCTCTCGGGACCA
TTTAACGCGATCCATGTGGATCCATACATAG

Add to Basket

Pages

Pages

Pages

Pages

Search form