EMLSAG00000006751, EMLSAG00000006751-689517 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006751 vs. GO
Match: - (symbol:polr1a "polymerase (RNA) I polypeptide A" species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001054 "RNA polymerase I activity" evidence=IBA] [GO:0005736 "DNA-directed RNA polymerase I complex" evidence=IBA] [GO:0016779 "nucleotidyltransferase activity" evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR000722 InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007080 InterPro:IPR007081 InterPro:IPR007083 InterPro:IPR015699 Pfam:PF00623 Pfam:PF04983 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000 SMART:SM00663 ZFIN:ZDB-GENE-030131-5286 GO:GO:0003677 GO:GO:0008270 GO:GO:0006360 GO:GO:0005736 GO:GO:0003899 OMA:CLLNETT PANTHER:PTHR19376:SF11 TreeFam:TF103033 GeneTree:ENSGT00550000074861 EMBL:AL929267 EMBL:CU694378 Ensembl:ENSDART00000114501 PRO:PR:E7F710 ArrayExpress:E7F710 Bgee:E7F710 Uniprot:E7F710) HSP 1 Score: 1293.49 bits (3346), Expect = 0.000e+0 Identity = 746/1757 (42.46%), Postives = 1031/1757 (58.68%), Query Frame = 0
Query: 17 ALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSL-KKKCGECGG------------------YTKKISLYQSRFIYEG----EDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLK-DCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDL---------SSEA-------QEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNA--SQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANL--GSLNSELRRFHRESYKAPQKR--MKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSEDDDS-QNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYL----------KNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDK----LRIKLNRCALSDVLESVHVTEKISLFGSS--RCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVL--IPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQ-------------QKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGL-------SDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLT----KDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
+SFG+FS++E R LS ITNP + +G+ GLYDL +GP ++ + CSTC+ F CPGHFGHIELPLPV NPLF+ +L LIR SC+SCH L L L Q KLLD+G + E + +++ E + S G E I + L D ++ +L++ K T +++ + + I F+ + + KKC C KK S EG D+ + L P + H+ + W + LK ++ D SD ++FFL ++ PP + RP G M + Q ++Q +++ I+++++ I +E ++ + SSEA Q L +I+G T+ KL W LQ+ V+ + D +M+ ++K G +QL+E+K GLFR HMMGKRV++AAR+VI PD YI +EIG+P VFA KL+Y PVTPWNV+E+R+ V+NGPN+HPGA + E G R ++ + QREA+AK LLTPS+ MK V RH+ NGD +LLNRQPTLH+PSI +H AR+L GEKV+RLHYA CK+YNADFDGDEMNAHFPQ+E++R+EA LV +QYLVPKDG PL GLIQDH+++G M+IRG FF + +Y LVY L + G++K LPP + KP LW+GKQ++ST++LN IP + L K KI W+ ++PRP + + + SMCES+V+ GEL+ GV+DK YG++ Y LVH YELYGG +S +LLS +R+FT +L GFTLGV DILV+ A K++ C + + NL + ++E R ++++ +R VD +KE + + N IN C+P GL + FPENNLQ+MVQ+GAKGSTVNTMQISCLLGQIELEG+RPP+M SG+SLP F PY+ QPR+GGF+ GRF+TGIKP EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLVV YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q F+ DN + + L + M+ LN K+ I+K + K RDGAFL FS+ + + GR T LI++W D+S + + KK P+PC ++RPD +FGSV+E + +++SYL ++++ ++ R+++ K+ +++ DPGE VG++A QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREIL+VASSNIKTP I P V+ + K LR K+ R LS+VL V+V E + + R+ KI FLP + Y+ D + P IL Y+E+ FF +L I + A L LV T ++ N+N D +D++ G DAE D+E DADAT+ K+ +Q ++ E ++E E + ES Q+ N ++ G +S+ R V L+ + I +Y D KK LW E+TL P+ + D ++++ A VI E K I + L KD ++E + T+GINI MF++ D+LD+ RL N +H MA YGIE A R I EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI++N SPLQQMTFET+ FL+ AT+ G D L SPS+C+++GK GGT F + Q L
Sbjct: 14 GMSFGLFSADETRKLSVKTITNPQLLDNVGNAAANGLYDLALGPADNKEI-CSTCMQDFSSCPGHFGHIELPLPVYNPLFFDKLYLLIRGSCLSCHILKCPRAAIHLLLCQLKLLDVGAMKEVFEIENVL----NQFLESNPSPPGEE-----IQETLNDFVKPILETRKDKQHTDPVKHICEKKSSLITSFWRIHMGPKKCQNCKANRMTVRKEHNSKLIVTQTLHKKASEQDDTLSLEGLTLLSDDSQLTKRIFLTPSVAREHIIKLWETEGFFLKHLFSGFDMDNSDNGFNPEVFFLELLVVPPCRYRPINRLGDQMFTNGQTVNMQAVLKDGLIIQKLLTLIADEKTKAIEGTQTELEQSSEAPKVTEIDQSFLTSIQGVTLTDKLYSTWIHLQSLVNIVFDSDMDKLITEKFP---GVRQLLEKKEGLFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKEMRQAVLNGPNIHPGATMVVNEDGSRTILSSTNQTQREAVAKQLLTPSTGQHRIPMKIVNRHIKNGDVLLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELSRAEAYTLVSTDQQYLVPKDGKPLAGLIQDHMVSGTSMTIRGCFFTRDQYTALVYRGLTDKIGRVKLLPPTLIKPVLLWTGKQVVSTLLLNVIPENSIPLNLTGKAKIPGKAWVKESPRP-----VPGYVPE---SMCESQVVIRQGELLMGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTAYLQLYRGFTLGVEDILVKDGA-----------KSV--TCGSKALQAAFNLPASAEDTEARERWQDAHLNIDQRDFNMVDLKFKEEVNQVNNNINKVCMPLGLHRSFPENNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYEPQPRSGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPRQFPFIKDNYEVIRKSKCLDEVLAK-MDPVAALNHFKA-IKKWKAKHEHASPRDGAFLLFSQKKMSKLKAQVEGHELVNGREEATLQLIERWRALDESGRMRYSKKTSHCPEPCLGLYRPDISFGSVSETFDSIVESYLNQFNIKQEFSASSETTDADRLRNLLQLKWQRALCDPGEAVGLVAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILLVASSNIKTPMMSI---PVVMNKKALKQVKTLRKKITRVCLSEVLHKVNVIESFRMPKKETLKSRVFKITFHFLPPERYQQDKLLNPDEILHYMEQTFFRMLLEAIKKLTAKLAAISLV---ETRRATVNDNDRDTSDGGADREVNSLNRSHVFRCNDDNGGEDAENERIVDDEANEGDADATDSKRKEKQEEEVDYESEEGEEGSDQEQEEVAEEQEASQEVSEEGSTESQQRVNSEQPKG-------------SSQGSVRINSVLQLSAA------IEDYKYDTKKGLWCELTLVMPITKVHFDLTSVVVKQAQNAVIMETKGITRCLLNEVTRKDGSKEIMLNTEGINIHEMFKYADILDLKRLYSNEVHAMASTYGIEVALRVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSFKFLKQATMLGSYDKLSSPSACLVVGKVVKGGTGIFDLKQPL 1709
BLAST of EMLSAG00000006751 vs. GO
Match: - (symbol:POLR1A "DNA-directed RNA polymerase" species:9031 "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005736 "DNA-directed RNA polymerase I complex" evidence=IBA] [GO:0006360 "transcription from RNA polymerase I promoter" evidence=IBA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001054 "RNA polymerase I activity" evidence=IBA] InterPro:IPR000722 InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007080 InterPro:IPR007081 InterPro:IPR007083 InterPro:IPR015699 Pfam:PF00623 Pfam:PF04983 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000 SMART:SM00663 GO:GO:0003677 GO:GO:0008270 GO:GO:0006360 GO:GO:0005736 GO:GO:0003899 PANTHER:PTHR19376:SF11 OrthoDB:EOG7H1JJM TreeFam:TF103033 GeneTree:ENSGT00550000074861 EMBL:AADN03004048 EMBL:AADN03004141 Ensembl:ENSGALT00000037150 Uniprot:F1NJE0) HSP 1 Score: 1278.46 bits (3307), Expect = 0.000e+0 Identity = 741/1728 (42.88%), Postives = 1027/1728 (59.43%), Query Frame = 0
Query: 18 LSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSL-KKKCGECGG--------YTKKISL-YQSRFIYE-GE----DEDASKNKTEL------NPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQ--------------IVQN-INEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYL--KNNKSDKG--------EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFL-PHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRC-RIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDS-SDKQQKQKGFDAEEHASSDEEEQPD--DADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDD---IPIISRSISASEVQKRRTHVK-NLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENE----ETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKLS 1684
+SFG++++EEIR LS ITNP + +G+P GLYDL +GP D +C+TC+ F CPGHFGHIELPL V NPLF+ +L LIR SC++CH L + L L Q K+L+ GL+ H + E+S T E +E L H+ +L S + + +NV R I F+ + KKC C + K+++ Y S + + GE DE A+ ++T+L P + + W + L++++P + D D+FFL+++ PP + RP G M + Q +LQ +++ T++++ IV+N I E+ E + +L TI G T+ KL W LQ V+ + D +M+ G +QL+E+K GLFR HMMGKRV+FAAR+VI PD YI +EIG+P VFA KL+Y PVTPWNV+ELR+ VINGP VHPG++ I E G R ++ + QREA+AK LLTPSS + +K V RH+ +GD +LLNRQPTLH+PSI +HRAR+L GEKV+RLHYA CK+YNADFDGDEMNAHFPQNE+ R+EA L EQYLVPKDG PL GLIQDH ++GV M+IRG FF + +Y +LVY L + KG+IK PPAI KP++LW+GKQ++ST+++N IP + L K KI W+ R ++S S+CES+VI +GEL+CGV+DK +G++ Y LVH YE+YGG +S ++L+ R+FT +L GFT+G+ DILV+ +A+ R +I+K+ G E + ++L + + + K + VD +KE + N +N C+P GL + FPENNLQLMVQ+GAKGSTVNT+QISCLLGQIELEG+RPP+M SG+SLP F PYD P +GGF+ GRF+TGIKP EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLVV YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q F+ DN + + T L S + + IRK + + R+G FL FS+ S I + GR T L+K W E D+ + + KK + PDP +V+RPDS F SV+E E ++ Y+ + KS G ++ +D++Y K+ +S+ DPGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS+NIKTP + L + +L+ +L R L++VL+ V + E + L R+ KI+ FLP + Y+ + V P IL ++E FF K+ + I E T K+ KD + DK Q + E + +PD D DATE K Q ++ E + + + +DE E +E +Q +ED+ DD +P +S++ + + V+ N ++ S I +Y D + ELW E++L P+ + D S+L+ + VI+E+K I + L + NE E + T+GIN+ +F++ D+LD+NRL N IH MA+ YGIE+A R + EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI+++ SPLQQMTFET+ FL+ AT+ G D L+SPS+C++LGK GGT F + Q L+
Sbjct: 15 VSFGLYTAEEIRKLSVKAITNPQYLDNVGNPSINGLYDLALGP-PDSKEACATCMQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLLLSQLKVLEHGLL----HAVHDLEVILNRFLEQSADATALEIEEE-----LNHHVDEILQSQELSDQCSNVKNVCECRNKLISQFWKAHMTSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVLRKAGEEGIGDEPAAIDETQLGKRGYLTPMTAKEFVLALWKNEGFFLRYLFPGMDPHKDSAFSPDMFFLDLLVVPPSRYRPINRVGDRMFTNGQTVNLQAVMKDATLIRKLLVFMAKEQCQPIKIVENEIQTETGESDEPLDRSVLATIPGQTIADKLYNAWIRLQTHVNIVFDSDMDKMMTEKYP-GIRQLLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVINGPKVHPGSMVI-NEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQSGLKIVCRHIKSGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQNELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDH-MSGVSMTIRGCFFTREQYMELVYRGLTDKKGRIKTFPPAIMKPQRLWTGKQVVSTLLINIIPENHVPLNLTGKAKIGGKAWM----------RGPANSCLNLDSLCESQVIIRSGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCLGRLFTAYLQLYRGFTMGIEDILVKPEADRKRHKIIKKSSQCGIEVVRAALNLPETSSCEDVQGKWQDAHLCKDQRDFNMVDLKFKEEVNNYNNEVNKVCMPFGLHRSFPENNLQLMVQSGAKGSTVNTVQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPSEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPEQFPFIADNYEVI--QKTNHLNEALARMESHQAKQQFKAIRKWWARHQNSVQREGGFLLFSQKKMASVKTQIPGGESINGRDPATLQLLKMWYELDEKKRRKYLKKANKCPDPSLAVWRPDSYFASVSETFESGVEDYINKRECKSRGGCMQPALSSDRLKDLLYLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVLGTKKAHKKVKQLKKQLTRVCLAEVLQKVELEESLHLKNKENSHRLYKIKFCFLPYEYYREEKCVKPRDILRFMETRFF-KIFLEAIRRRRAKMSSFTEVSTRKATR------KDLEGVGDKAQNNQEAPEGEEEEKIVDAEPDEGDGDATEAKMRRNQEEEVDYESEEENGEENTAENPEDEEAESEKEERAQDADEDQNGADGDDSQHLPFMSQTKKERDQLLKSAEVRVNAVLNSHPS--IQDYTFDTENELWCEVSLTLPLMKVYFDISSLLLSLTRNTVIHEVKGITRCLLNESTNEKGEKELILHTEGINLAELFRYSDILDLNRLYSNDIHAMAKNYGIESALRVVIKEIKDVFAVYGIVVDPRHLSLVADYMCFEGVYKPMNRFGIQSSSSPLQQMTFETSYKFLKEATMMGAHDELRSPSACLVLGKVVKGGT-GFDLKQPLT 1707
BLAST of EMLSAG00000006751 vs. GO
Match: - (symbol:Polr1a "polymerase (RNA) I polypeptide A" species:10090 "Mus musculus" [GO:0001054 "RNA polymerase I activity" evidence=IBA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005736 "DNA-directed RNA polymerase I complex" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009303 "rRNA transcription" evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA] [GO:0016779 "nucleotidyltransferase activity" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] Reactome:REACT_78136 InterPro:IPR000722 InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007080 InterPro:IPR007081 InterPro:IPR007083 InterPro:IPR015699 Pfam:PF00623 Pfam:PF04983 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000 SMART:SM00663 MGI:MGI:1096397 GO:GO:0005654 GO:GO:0003677 GO:GO:0008270 GO:GO:0006360 GO:GO:0005736 GO:GO:0003899 eggNOG:COG0086 CleanEx:MM_RPA1 Reactome:REACT_107193 KO:K02999 OMA:CLLNETT PANTHER:PTHR19376:SF11 OrthoDB:EOG7H1JJM CTD:25885 HOGENOM:HOG000205401 HOVERGEN:HBG017741 TreeFam:TF103033 ChiTaRS:POLR1A EMBL:AF000938 EMBL:BC053744 PIR:T13961 RefSeq:NP_033114.3 UniGene:Mm.135581 ProteinModelPortal:O35134 SMR:O35134 BioGrid:202995 STRING:10090.ENSMUSP00000060858 PhosphoSite:O35134 PaxDb:O35134 PRIDE:O35134 Ensembl:ENSMUST00000055296 GeneID:20019 KEGG:mmu:20019 UCSC:uc009chv.2 GeneTree:ENSGT00550000074861 InParanoid:O35134 NextBio:297531 PRO:PR:O35134 ArrayExpress:O35134 Bgee:O35134 Genevestigator:O35134 Uniprot:O35134) HSP 1 Score: 1263.44 bits (3268), Expect = 0.000e+0 Identity = 720/1738 (41.43%), Postives = 1032/1738 (59.38%), Query Frame = 0
Query: 17 ALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLK-KKCGECGG--------YTKKISLYQSRFIYEGEDEDASK-----------------NKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCS-DMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESS------------EDLSSEA--QEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSD-PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSL--NANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDIN-KIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAE----KVEDLIQSYLKN-----NKSDKG-EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTP-SSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCR--IIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDEN-------KSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDEN----EETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
+SFGM+S+EE++ LS ITNP + LG+P GLYDL +GP +D C+TC+ F+ C GH GHI+LPL V NP + +L L+R SC+SCH L L + Q ++L++G + + ++ + EE+ + E +E L ++ +L +N S +NV R + F+ + K+C C + K+ + +++ D++ ++ + L P Q HL W + L +++ L D + +FFL+ + PP + RP G M + Q +LQ +++ ++++++ + +E E+ SS A + L + G ++ KL +W LQ+ V+ + D EM+ G +Q++E+K GLFR HMMGKRV++AAR+VI PD YIN +EIG+P VFA KL+Y PVTPWNV+ELR+ VINGPNVHPGA + E G R + D QREA+AK LLTP++ P K V RH+ NGD +LLNRQPTLH+PSI +HRAR+L EKV+RLHYA CK+YNADFDGDEMNAHFPQ+E+ R+EA L +QYLVPKDG PL GLIQDH+++G M+IRG FF + +Y +LVY L + G++K PPAI KP LW+GKQ++ST+++N IP + L K KI S W+ + PRP S MCES+VI GEL+CGV+DK YG++ Y LVH YE+YGG +S +L+ +R+FT +L GFTLGV DILV+ +A+ R+ I+++ G + + +SL A+ + + + H K + +D +KE + +N IN AC+P GL ++FPENNLQ+MVQ+GAKGSTVNTMQISCLLGQIELEG+RPP+M SG+SLP F PY+ PRAGGF+ GRF+TGI+P EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLV+ YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q FL N + ++ L + + L +K+ I+K K G R GAFL FS+ ++++ +N K + GRS T +++ W + D++S+ ++K+ PDP SV+RPD F SV+E K++D Q + KS+ ++ R ++ K+ +S+ DPGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS+NIKTP SV F + L+ +L R L +VL+ V + E + G R + + ++R QFLP Y+ + + P IL ++E FF K+L+ I +K S+ + +++D + DS Q++++ + EE D E + DADA++ K+ +Q ++ E + E + + +++ N + E DE E+E QK P +E KRR + + SF I +Y D ++ LW ++T+ P+ + D S+L+ + A K ++Y K I + L + N +E + T+GIN+ +F++ ++LD+ RL N IH MA YGIEAA R I EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI+++ SPLQQMTFET+ FL+ AT+ G D L+SPS+C+++GK GGT F++ Q L
Sbjct: 14 GISFGMYSAEELKKLSVKSITNPRYVDYLGNPSANGLYDLALGP-ADSKEVCATCVQDFNNCSGHLGHIDLPLTVYNPFLFDKLYLLLRGSCLSCHMLTCPRAAIYLLISQLRVLEVGALQAVYELERIL----SRFLEETGDPSAFEIQEE-----LEEYTSKILQNNLLGSQGTHVKNVCESRSKLVAQFWKTHMAAKQCPHCKTGRSVVRKEHNSKLIITYPATVHKKSDQEGTELPEGVPEAPGIDKAQMGKRGYLTPSSAQEHLFAIWKNEGFFLNYLFSGLDDIGPESSFNPSMFFLDFIVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDAVLIRKLLALMAQEQKLPCEMTELTIDKENDSSVAIDRSFLGLLPGPSLTDKLYNIWIRLQSHVNIVFDSEMDKLMLEKYP-GIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSSVDAAQREAVAKQLLTPATGAPKPQGTKVVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELVYRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDYAPLNLSGKAKIGSKAWVKEKPRPIPDFDPDS--------MCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPNADVVRQRIIEESTQCGPQAVKAALSLPETASCDEIQGKWQDAHLS--KDQRDFNMIDMKFKEEVNHYSNEINKACMPLGLHRQFPENNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVIQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLAGNYEVIMKSKHLHEVLSRA-DPQKVLGHIKA-IKKWHHKHSGALLRKGAFLSFSQ-KIQAAVKALNLKGSIQNGRSPETQQMLQMWYDLDEESRWKYQKRAAPCPDPSLSVWRPDIYFASVSETFEKKIDDFSQEWAAQAERSYKKSELSLDRLRTLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVFDTKKALKKVKSLKKRLTRVCLGEVLQKVDIQESFCM-GEKRNKFQVYELRFQFLPHAYYQQEKCLRPEDILHFMETRFF-KLLMEAIKKK-KNKASAFRNVNSRRATQKDLNDTE-DSGRSQREEERDEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEGEEEEEEEVQEEGNIKGDGVHQGHEPDEEEHLGLEEEESSQKP--PRRHSRPQGAEAIKRRIQ----AVRESYSF-IEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHKAIVYTTKGITRCLLNETTNSKNEKELVLNTEGINLPELFKYSEILDLRRLYSNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1716
BLAST of EMLSAG00000006751 vs. GO
Match: - (symbol:POLR1A "DNA-directed RNA polymerase" species:9615 "Canis lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000722 InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007080 InterPro:IPR007081 InterPro:IPR007083 InterPro:IPR015699 Pfam:PF00623 Pfam:PF04983 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000 SMART:SM00663 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0003899 KO:K02999 PANTHER:PTHR19376:SF11 OrthoDB:EOG7H1JJM CTD:25885 GeneTree:ENSGT00550000074861 EMBL:AAEX03010931 RefSeq:XP_532976.3 Ensembl:ENSCAFT00000047500 GeneID:475766 KEGG:cfa:475766 Uniprot:J9P5G4) HSP 1 Score: 1256.51 bits (3250), Expect = 0.000e+0 Identity = 720/1748 (41.19%), Postives = 1035/1748 (59.21%), Query Frame = 0
Query: 7 TRNVVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSL-KKKCGECGG--------YTKKISLYQSRFIYEGEDEDASK----------NKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDME---HPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESS------------EDLSSEA--QEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSD-PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKR--MKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELK--SKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDP-KTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSY-----LKNNKSDKG-----EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTP-SSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLF-GSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASS----DEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENK--SDEDDESSQKYNEDELLGQKDDIPIIS-----RSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDEN----EETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
++N+ +SFGM+S+EE++ LS ITNP + LG+P GLYDL +GP +D CSTC+ F+ C GH GHIELPL V NPL + +L L+R SC++CH L L + Q ++L++G + + ++ EE+ T + +E + Q +QN L P H +NV R I F+ + K+C C + K+++ +++ D+ ++ + L P + HL W + L +++ L+D DME +P+ +FFL+ + PP + RP G M + Q +LQ +++ + ++++++ + +E E SS A + L + G ++ KL +W LQ+ V+ + D EM+ G +Q++E+K GLFR HMMGKRV++AAR+VI PD YIN +EIG+P VFA KL+Y PVTPWNV+ELR+ VINGPNVHPGA + E G R + D QREA+AK LLTP++ P K V RH+ NGD +LLNRQPTLH+PSI +H AR+L EKV+RLHYA CK+YNADFDGDEMNAHFPQ+E+ R+EA L +QYLVPKDG PL GLIQDH+++G M+IRG FF + +Y +L+Y L + G++K PPAI KP LW+GKQ++ST+++N IP ++L K KI W+ ++PRP S MCES+VI GEL+CGV+DK YG++ Y LVH YE+YGG +S ++L+ +R+FT +L GFTLGV DILV+ A+ R ++++ + G + +LN + E+R ++++ +R +D +KE + +N IN AC+P GL ++FP+NNLQ+MVQ+GAKGSTVNTMQISCLLGQIELEG+RPP+M SG+SLP F PY+ PRAGGF+ GRF+TGIKP EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLVV YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q FL N K ++ L + ++ +D L+ I+K + K R GAFL +S+ ++++ +N D + GRS T+ ++K W E D+ S+ ++KK PDP +V+RPD F SV+E E + Y + KS K ++ R ++ K+ +S+ DPGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS+NIKTP SV F L+ +L R L +VLE + V E + + ++ ++R QFLP Y+ + + P IL ++E FF K+L+ + +K + +S + +D D+S + ++ +G D E + DADA++ K+ +Q ++ E +E + D + E + S +Q+ NE+ G +D P +S E Q + + +++ I +Y D ++ LW ++T+ P+ + D ++L+ + A V+Y K I + L + N +E + T+GIN+ +F++ ++LD++RL N IH MA YGIEAA R I EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI +N SPLQQMTFET+ FL+ AT+ G D L+SPS+C+++GK GGT F++ Q L
Sbjct: 4 SKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGP-ADSKEVCSTCVQDFNNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLLVCQLRVLEVGALQAVYELERIL----NRFLEENADPTAFKIQEE-LEQYTAKIVQNNLLG---PHGAH-VKNVCDSRSKLIAYFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTVTYPAMVHKKADQKDTEPLGIEETQLGKRGYLTPTSAREHLTALWKNEGFFLNYLFSGLEDV-DMESRFNPS-VFFLDFLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCEVSGPAKDEEKDSSIALDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYP-GIRQILEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAIDLTQREAVAKQLLTPATGAPKPQGTKIVCRHVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELLYRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLSLSGKAKISGKAWVQESPRPVPGFNPDS--------MCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTCLARLFTAYLQLYRGFTLGVEDILVKRKADMKRHLVIEESTHCGPRAVRA--ALNLPEAASCDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPDNNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYKVIMKSKYLHEV----LSRADPQKALRHFRAIKKWQSKHSNALQRKGAFLNYSQ-KIQAAVKALNLEDGNQNGRSLGTHQILKMWGELDEQSRRKYQKKAAPCPDPSLAVWRPDIYFASVSETFEKKVDDYSLEWAAQAEKSYKKSELSLDRLRTLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLEKIDVQESFCIGEKQDKFQVYQLRFQFLPHAYYQQEKCLRPEDILHFMETRFF-KILMESL------RKKNNKASAFRSVNTRRATQRDLDNSGESERNRGEQEGNEEEEGPIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEVEEENEDEDMQEEEHISGNSAHKAQEQNEEVGSGPEDSPPATPLTQPRKSTQNREPQGAEAKERRVQAVRESHPFIEDYQYDTEESLWCQVTVKLPLMKINFDMTSLVMSLAQSAVVYATKGITRCLLNETTNKKNEKELVLNTEGINLPELFKYAEVLDLSRLYSNDIHAMASTYGIEAALRVIEKEIRDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMMGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1716
BLAST of EMLSAG00000006751 vs. GO
Match: - (symbol:Polr1a "DNA-directed RNA polymerase I subunit RPA1" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006360 "transcription from RNA polymerase I promoter" evidence=IBA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001054 "RNA polymerase I activity" evidence=IBA] InterPro:IPR000722 InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007080 InterPro:IPR007081 InterPro:IPR007083 InterPro:IPR015699 Pfam:PF00623 Pfam:PF04983 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000 SMART:SM00663 RGD:620824 GO:GO:0003677 GO:GO:0008270 GO:GO:0009303 GO:GO:0006360 GO:GO:0005736 GO:GO:0003899 eggNOG:COG0086 KO:K02999 PANTHER:PTHR19376:SF11 CTD:25885 HOGENOM:HOG000205401 HOVERGEN:HBG017741 EMBL:AF025425 PIR:T14103 RefSeq:NP_113960.1 UniGene:Rn.24877 ProteinModelPortal:O54889 MINT:MINT-1507847 STRING:10116.ENSRNOP00000013587 PhosphoSite:O54889 PaxDb:O54889 PRIDE:O54889 GeneID:83581 KEGG:rno:83581 UCSC:RGD:620824 InParanoid:O54889 NextBio:616111 PRO:PR:O54889 Genevestigator:O54889 Uniprot:O54889) HSP 1 Score: 1254.58 bits (3245), Expect = 0.000e+0 Identity = 713/1740 (40.98%), Postives = 1030/1740 (59.20%), Query Frame = 0
Query: 17 ALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLK-KKCGECGG--------YTKKISLYQSRFIYE-----------------GEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCS-DMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESS------------EDLSSEA--QEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSD-PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMK-VDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKS--KIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKT--GRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLK---------NNKSDKG-EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIK-----LNRCALSDVLESVHVTEKISLF-GSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDEN----KSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDEN----EETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
+SFGM+S+EE++ LS ITNP + LG+P GLYDL +GP +D CSTC+ F+ C GH GHI+LPL V NPL + +L L+R SC++CH L L + Q K+LD+G + + ++ + EE+ + E +E L ++ +L +N S +NV R + F+ + K+C C + K+++ +++ G DE + L P Q HL W + L +++ L D + +FFL+ + PP + RP G M + Q +LQ +++ ++++++ + +E E+ SS A + L + G ++ KL +W LQ+ V+ + D +M+ G +Q++E+K GLFR HMMGKRV++AAR+VI PD YIN +EIG+P VFA KL+Y PVTPWNV+ELR+ VINGPNVHPGA + E G R + D QREA+AK LLTPS+ P K V RH+ NGD +LLNRQPTLH+PSI +HRA +L EKV+RLHYA CK+YNADFDGDEMNAHFPQ+E+ R+EA L +QYLVPKDG PL GLIQDH+++G M+IRG FF + +Y +LVY L + G++K PPAI KP LW+GKQ++ST+++N IP + L K KI S W+ + PRP S MCES+VI GEL+CGV+DK YG++ Y LVH YE+YGG +S +L+ +R+FT +L GFTLGV DILV+ +A+ R+ I+++ G + ++L S + ++ ++ Q+ +D +KE + +N IN AC+P GL ++FPENNLQ+MVQ+GAKGSTVNTMQISCLLGQIELEG+RPP+M SG+SLP F PY+ PRAGGF+ GRF+TGI+P EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLV+ YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q FL N + ++ L + ++ +D L+ I+K + R GAFL FS+ ++++ +N ++ KT GRS T +++ W E D+ S+ ++K+ PDP SV+RPD +F SV+E E I Y + +N+S+ ++ R ++ K+ +S+ DPGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS+NIKTP + V ++K R+K L R L +VL+ V + E + ++ R+ ++R QFLP Y+ + + P IL ++E FF K+L+ I K + ++ + ++DD + DS +++++ + EE D E + DADA++ K+ +Q ++ E + E + D +++EN + + E ++ + P +E +RR + + SF I +Y D ++ LW ++T+ P+ + D S+L+ + A ++Y K I + L + N +E + T+GIN+ +F++ ++LD+ RL N IH +A YGIEAA R I EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI+++ SPLQQMTFET+ FL+ AT+ G D L+SPS+C+++GK GGT F++ Q L
Sbjct: 14 GISFGMYSAEELKKLSVKSITNPRYVDSLGNPSADGLYDLALGP-ADSKEVCSTCVQDFNNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAAIHLLVCQLKVLDVGALQAVYELERIL----SRFLEETSDPSAFEIQEE-----LEEYTSKILQNNLLGSQGAHVKNVCESRSKLVAHFWKTHMAAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHKKSGQKDAELPEGAPAAPGIDEAQMGKRGYLTPSSAQEHLFAIWKNEGFFLNYLFSGLDDIGPESSFNPSMFFLDFIVVPPSRYRPINRLGDQMFTNGQTVNLQAVMKDAVLIRKLLAVMAQEQKLPCEMTEITIDKENDSSGAIDRSFLSLLPGQSLTDKLYNIWIRLQSHVNIVFDSDMDKLMLEKYP-GIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDATQREAVAKQLLTPSTGIPKPQGAKVVCRHVKNGDILLLNRQPTLHRPSIQAHRAHILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELVYRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDYTPLNLTGKAKIGSKAWVKEKPRPVPDFDPDS--------MCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPNADVMRQRIIEESTQCGPRAVRAALNL-PEAASCDEIQGKWQDAIWRKDQRDFNMIDMKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVIQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEV----LSRADPQKVLRHFRAIKKWHHRHSSALLRKGAFLSFSQ-KIQAAVKALN-LEGKTQNGRSPETQQMLQMWHELDEQSRRKYQKRAAPCPDPSLSVWRPDIHFASVSETFEKKIDDYSQEWAAQAEKSHNRSELSLDRLRTLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSV----PVFNTKKALRRVKSLKKQLTRVCLGEVLQKVDIQESFCMGEKQNKFRVYELRFQFLPHAYYQQEKCLRPEDILHFMETRFF-KLLMEAIKKK-NSKASAFRSVNTRRATQKDLDDTE-DSGRNRREEERDEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEGEEEEEEDVQEEENIKGEGAHQTHEPDEEEGSGLEEESSQNPPCRHSRPQGAEAMERRIQ----AVRESHSF-IEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHNAIVYTTKGITRCLLNETINSKNEKEFVLNTEGINLPELFKYSEVLDLRRLYSNDIHAVANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1715
BLAST of EMLSAG00000006751 vs. GO
Match: - (symbol:Polr1a "polymerase (RNA) I polypeptide A" species:10116 "Rattus norvegicus" [GO:0001054 "RNA polymerase I activity" evidence=IBA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005736 "DNA-directed RNA polymerase I complex" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006360 "transcription from RNA polymerase I promoter" evidence=IBA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009303 "rRNA transcription" evidence=IDA] InterPro:IPR000722 InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007080 InterPro:IPR007081 InterPro:IPR007083 InterPro:IPR015699 Pfam:PF00623 Pfam:PF04983 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000 SMART:SM00663 RGD:620824 GO:GO:0003677 GO:GO:0008270 GO:GO:0009303 GO:GO:0006360 GO:GO:0005736 GO:GO:0003899 eggNOG:COG0086 KO:K02999 PANTHER:PTHR19376:SF11 CTD:25885 HOGENOM:HOG000205401 HOVERGEN:HBG017741 EMBL:AF025425 PIR:T14103 RefSeq:NP_113960.1 UniGene:Rn.24877 ProteinModelPortal:O54889 MINT:MINT-1507847 STRING:10116.ENSRNOP00000013587 PhosphoSite:O54889 PaxDb:O54889 PRIDE:O54889 GeneID:83581 KEGG:rno:83581 UCSC:RGD:620824 InParanoid:O54889 NextBio:616111 PRO:PR:O54889 Genevestigator:O54889 Uniprot:O54889) HSP 1 Score: 1254.58 bits (3245), Expect = 0.000e+0 Identity = 713/1740 (40.98%), Postives = 1030/1740 (59.20%), Query Frame = 0
Query: 17 ALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLK-KKCGECGG--------YTKKISLYQSRFIYE-----------------GEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCS-DMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESS------------EDLSSEA--QEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSD-PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMK-VDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKS--KIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKT--GRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLK---------NNKSDKG-EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIK-----LNRCALSDVLESVHVTEKISLF-GSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDEN----KSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDEN----EETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
+SFGM+S+EE++ LS ITNP + LG+P GLYDL +GP +D CSTC+ F+ C GH GHI+LPL V NPL + +L L+R SC++CH L L + Q K+LD+G + + ++ + EE+ + E +E L ++ +L +N S +NV R + F+ + K+C C + K+++ +++ G DE + L P Q HL W + L +++ L D + +FFL+ + PP + RP G M + Q +LQ +++ ++++++ + +E E+ SS A + L + G ++ KL +W LQ+ V+ + D +M+ G +Q++E+K GLFR HMMGKRV++AAR+VI PD YIN +EIG+P VFA KL+Y PVTPWNV+ELR+ VINGPNVHPGA + E G R + D QREA+AK LLTPS+ P K V RH+ NGD +LLNRQPTLH+PSI +HRA +L EKV+RLHYA CK+YNADFDGDEMNAHFPQ+E+ R+EA L +QYLVPKDG PL GLIQDH+++G M+IRG FF + +Y +LVY L + G++K PPAI KP LW+GKQ++ST+++N IP + L K KI S W+ + PRP S MCES+VI GEL+CGV+DK YG++ Y LVH YE+YGG +S +L+ +R+FT +L GFTLGV DILV+ +A+ R+ I+++ G + ++L S + ++ ++ Q+ +D +KE + +N IN AC+P GL ++FPENNLQ+MVQ+GAKGSTVNTMQISCLLGQIELEG+RPP+M SG+SLP F PY+ PRAGGF+ GRF+TGI+P EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLV+ YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q FL N + ++ L + ++ +D L+ I+K + R GAFL FS+ ++++ +N ++ KT GRS T +++ W E D+ S+ ++K+ PDP SV+RPD +F SV+E E I Y + +N+S+ ++ R ++ K+ +S+ DPGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS+NIKTP + V ++K R+K L R L +VL+ V + E + ++ R+ ++R QFLP Y+ + + P IL ++E FF K+L+ I K + ++ + ++DD + DS +++++ + EE D E + DADA++ K+ +Q ++ E + E + D +++EN + + E ++ + P +E +RR + + SF I +Y D ++ LW ++T+ P+ + D S+L+ + A ++Y K I + L + N +E + T+GIN+ +F++ ++LD+ RL N IH +A YGIEAA R I EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI+++ SPLQQMTFET+ FL+ AT+ G D L+SPS+C+++GK GGT F++ Q L
Sbjct: 14 GISFGMYSAEELKKLSVKSITNPRYVDSLGNPSADGLYDLALGP-ADSKEVCSTCVQDFNNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAAIHLLVCQLKVLDVGALQAVYELERIL----SRFLEETSDPSAFEIQEE-----LEEYTSKILQNNLLGSQGAHVKNVCESRSKLVAHFWKTHMAAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHKKSGQKDAELPEGAPAAPGIDEAQMGKRGYLTPSSAQEHLFAIWKNEGFFLNYLFSGLDDIGPESSFNPSMFFLDFIVVPPSRYRPINRLGDQMFTNGQTVNLQAVMKDAVLIRKLLAVMAQEQKLPCEMTEITIDKENDSSGAIDRSFLSLLPGQSLTDKLYNIWIRLQSHVNIVFDSDMDKLMLEKYP-GIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDATQREAVAKQLLTPSTGIPKPQGAKVVCRHVKNGDILLLNRQPTLHRPSIQAHRAHILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELVYRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDYTPLNLTGKAKIGSKAWVKEKPRPVPDFDPDS--------MCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPNADVMRQRIIEESTQCGPRAVRAALNL-PEAASCDEIQGKWQDAIWRKDQRDFNMIDMKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVIQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEV----LSRADPQKVLRHFRAIKKWHHRHSSALLRKGAFLSFSQ-KIQAAVKALN-LEGKTQNGRSPETQQMLQMWHELDEQSRRKYQKRAAPCPDPSLSVWRPDIHFASVSETFEKKIDDYSQEWAAQAEKSHNRSELSLDRLRTLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSV----PVFNTKKALRRVKSLKKQLTRVCLGEVLQKVDIQESFCMGEKQNKFRVYELRFQFLPHAYYQQEKCLRPEDILHFMETRFF-KLLMEAIKKK-NSKASAFRSVNTRRATQKDLDDTE-DSGRNRREEERDEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEGEEEEEEDVQEEENIKGEGAHQTHEPDEEEGSGLEEESSQNPPCRHSRPQGAEAMERRIQ----AVRESHSF-IEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHNAIVYTTKGITRCLLNETINSKNEKEFVLNTEGINLPELFKYSEVLDLRRLYSNDIHAVANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1715
BLAST of EMLSAG00000006751 vs. GO
Match: - (symbol:POLR1A "DNA-directed RNA polymerase I subunit RPA1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005736 "DNA-directed RNA polymerase I complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006360 "transcription from RNA polymerase I promoter" evidence=TAS] [GO:0006361 "transcription initiation from RNA polymerase I promoter" evidence=TAS] [GO:0006362 "transcription elongation from RNA polymerase I promoter" evidence=TAS] [GO:0006363 "termination of RNA polymerase I transcription" evidence=TAS] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010467 "gene expression" evidence=TAS] [GO:0001054 "RNA polymerase I activity" evidence=IBA] Reactome:REACT_71 InterPro:IPR000722 InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007080 InterPro:IPR007081 InterPro:IPR007083 InterPro:IPR015699 Pfam:PF00623 Pfam:PF04983 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000 SMART:SM00663 EMBL:CH471053 GO:GO:0005654 GO:GO:0003677 GO:GO:0008270 Reactome:REACT_1788 GO:GO:0006363 GO:GO:0006362 GO:GO:0006361 GO:GO:0005736 GO:GO:0003899 eggNOG:COG0086 KO:K02999 OMA:CLLNETT PANTHER:PTHR19376:SF11 EMBL:U33460 EMBL:AH007280 EMBL:AK302458 EMBL:BC117173 EMBL:BC126303 EMBL:AL117467 PIR:T17252 RefSeq:NP_056240.2 UniGene:Hs.531818 ProteinModelPortal:O95602 SMR:O95602 BioGrid:117396 DIP:DIP-27537N IntAct:O95602 MINT:MINT-111492 STRING:9606.ENSP00000263857 PhosphoSite:O95602 SWISS-2DPAGE:O95602 PaxDb:O95602 PRIDE:O95602 Ensembl:ENST00000263857 GeneID:25885 KEGG:hsa:25885 UCSC:uc002sqs.3 CTD:25885 GeneCards:GC02M086249 H-InvDB:HIX0002233 HGNC:HGNC:17264 HPA:CAB010145 HPA:HPA031513 HPA:HPA049700 neXtProt:NX_O95602 PharmGKB:PA134891380 HOGENOM:HOG000205401 HOVERGEN:HBG017741 InParanoid:O95602 TreeFam:TF103033 ChiTaRS:POLR1A GeneWiki:POLR1A GenomeRNAi:25885 NextBio:47304 PMAP-CutDB:O95602 PRO:PR:O95602 ArrayExpress:O95602 Bgee:O95602 CleanEx:HS_POLR1A Genevestigator:O95602 Uniprot:O95602) HSP 1 Score: 1253.43 bits (3242), Expect = 0.000e+0 Identity = 717/1748 (41.02%), Postives = 1036/1748 (59.27%), Query Frame = 0
Query: 7 TRNVVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLV-------PTPGTSLDEESMSRTGSEYNDEVIVQKLMD----HLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIYE----------GEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYP-MLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIV------QNINEESSEDLSSEAQE--------MLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSD-PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKR--MKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAE----KVEDLIQSYLKNNKS--DKGE----QFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIK-----LNRCALSDVLESVHVTEKISL-FGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQ----MDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDD--IPII----SRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYL---TKDENE-ETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
++N+ +SFGM+S+EE++ LS ITNP + LG+P GLYDL +GP +D CSTC+ F C GH GHIELPL V NPL + +L L+R SC++CH L L L Q ++L++G + + ++ P P S E + +Y E++ L+ H++NV +S K ++ A R K +V K+ + K+++ ++ G +E + L P + HL W + L +++ M D + +FFL+ + PP + RP G M + Q +LQ +++ V ++++++ Q + EE + + E ++ L T+ G ++ KL +W LQ+ V+ + D EM+ + G +Q++E+K GLFR HMMGKRV++AAR+VI PD YIN +EIG+P VFA KL+Y PVTPWNV+ELR+ VINGPNVHPGA + E G R + D QREA+AK LLTP++ P K V RH+ NGD +LLNRQPTLH+PSI +HRAR+L EKV+RLHYA CK+YNADFDGDEMNAHFPQ+E+ R+EA L +QYLVPKDG PL GLIQDH+++G M+ RG FF + Y +LVY L + G++K L P+I KP LW+GKQ++ST+++N IP + L K KI W+ + PR S SMCES+VI GEL+CGV+DK YG++ Y LVH YE+YGG +S ++L+ +R+FT +L GFTLGV DILV+ A+ R+ I+++ + G + + +LN + E+R ++++ +R +D +KE + +N IN AC+P GL ++FPEN+LQ+MVQ+GAKGSTVNTMQISCLLGQIELEG+RPP+M SG+SLP F PY+ PRAGGF+ GRF+TGIKP EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLVV YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q FL N + ++ L + + L+ ++ I+K + K R GAFL +S+ E+ + + + GRS T +++ W E D++S+ ++KK PDP SV+RPD F SV+E KV+D Q + + +K E + R ++ K+ +S+ +PGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS+NIKTP + VL ++K R+K L R L +VL+ + V E + ++ ++ ++R QFLP Y+ + + P IL ++E FF K+L+ I +K ++ + ++D+ + +++ + E H D E + DADA++ K+ +Q + +E + E D +++ N E +Q+ +E+ LG ++D +P + + + E Q + + ++ I +Y D ++ LW ++T+ P+ + D S+L+ + A VIY K I + L T ++NE E + T+GIN+ +F++ ++LD+ RL N IH +A YGIEAA R I EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI +N SPLQQMTFET+ FL+ AT+ G D L+SPS+C+++GK GGT F++ Q L
Sbjct: 4 SKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGP-ADSKEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLLLCQLRVLEVGALQAVYELERILNRFLEENPDPSASEIREELE----QYTTEIVQNNLLGSQGAHVKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKE-------HNSKLTITFPAMVHRTAGQKDSEPLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRFNPSVFFLDFLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPEEVATPTTDEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMMDKYP-GIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREHYMELVYRGLTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKITGKAWVKETPR--------SVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTCLARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPQAVRA--ALNLPEAASYDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRA-DPKKALHHFRA-IKKWQSKHPNTLLRRGAFLSYSQKIQEAVKALKLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAAACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSV----PVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFMETRFF-KLLMESIKKK-NNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHI-VDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVREIHPFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 1719
BLAST of EMLSAG00000006751 vs. GO
Match: - (symbol:Polr1a "DNA-directed RNA polymerase" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0005736 "DNA-directed RNA polymerase I complex" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000722 InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007080 InterPro:IPR007081 InterPro:IPR007083 InterPro:IPR015699 Pfam:PF00623 Pfam:PF04983 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000 SMART:SM00663 RGD:620824 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 EMBL:CH473957 GO:GO:0005736 GO:GO:0003899 OMA:CLLNETT PANTHER:PTHR19376:SF11 OrthoDB:EOG7H1JJM TreeFam:TF103033 GeneTree:ENSGT00550000074861 UniGene:Rn.24877 EMBL:AABR06031479 Ensembl:ENSRNOT00000013587 NextBio:35583903 PRO:PR:G3V7B7 Uniprot:G3V7B7) HSP 1 Score: 1251.5 bits (3237), Expect = 0.000e+0 Identity = 716/1743 (41.08%), Postives = 1032/1743 (59.21%), Query Frame = 0
Query: 17 ALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLK-KKCGECGG--------YTKKISLYQSRFIYE-----------------GEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCS-DMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESS------------EDLSSEA--QEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSD-PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNS--ELRRFHRESYKAPQKR--MKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKS--KIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKT--GRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLK---------NNKSDKG-EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIK-----LNRCALSDVLESVHVTEKISLF-GSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDEN----KSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDEN----EETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
+SFGM+S+EE++ LS ITNP + LG+P GLYDL +GP +D CSTC+ F+ C GH GHI+LPL V NPL + +L L+R SC++CH L L + Q K+LD+G + + ++ + EE+ + E +E L ++ +L +N S +NV R + F+ + K+C C + K+++ +++ G DE + L P Q HL W + L +++ L D + +FFL+ + PP + RP G M + Q +LQ +++ ++++++ + +E E+ SS A + L + G ++ KL +W LQ+ V+ + D +M+ G +Q++E+K GLFR HMMGKRV++AAR+VI PD YIN +EIG+P VFA KL+Y PVTPWNV+ELR+ VINGPNVHPGA + E G R + D QREA+AK LLTPS+ P K V RH+ NGD +LLNRQPTLH+PSI +HRA +L EKV+RLHYA CK+YNADFDGDEMNAHFPQ+E+ R+EA L +QYLVPKDG PL GLIQDH+++G M+IRG FF + +Y +LVY L + G++K PPAI KP LW+GKQ++ST+++N IP + L K KI S W+ + PRP S MCES+VI GEL+CGV+DK YG++ Y LVH YE+YGG +S +L+ +R+FT +L GFTLGV DILV+ +A+ R+ I+++ +C V NL S E++ ++++ +R +D +KE + +N IN AC+P GL ++FPENNLQ+MVQ+GAKGSTVNTMQISCLLGQIELEG+RPP+M SG+SLP F PY+ PRAGGF+ GRF+TGI+P EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLV+ YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q FL N + ++ L + ++ +D L+ I+K + R GAFL FS+ ++++ +N ++ KT GRS T +++ W E D+ S+ ++K+ PDP SV+RPD +F SV+E E I Y + +N+S+ ++ R ++ K+ +S+ DPGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS+NIKTP + V ++K R+K L R L +VL+ V + E + ++ R+ ++R QFLP Y+ + + P IL ++E FF K+L+ I K + ++ + ++DD + DS +++++ + EE D E + DADA++ K+ +Q ++ E + E + D +++EN + + E ++ + P +E +RR + + SF I +Y D ++ LW ++T+ P+ + D S+L+ + A ++Y K I + L + N +E + T+GIN+ +F++ ++LD+ RL N IH +A YGIEAA R I EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI+++ SPLQQMTFET+ FL+ AT+ G D L+SPS+C+++GK GGT F++ Q L
Sbjct: 14 GISFGMYSAEELKKLSVKSITNPRYVDSLGNPSADGLYDLALGP-ADSKEVCSTCVQDFNNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAAIHLLVCQLKVLDVGALQAVYELERIL----SRFLEETSDPSAFEIQEE-----LEEYTSKILQNNLLGSQGAHVKNVCESRSKLVAHFWKTHMAAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHKKSGQKDAELPEGAPAAPGIDEAQMGKRGYLTPSSAQEHLFAIWKNEGFFLNYLFSGLDDIGPESSFNPSMFFLDFIVVPPSRYRPINRLGDQMFTNGQTVNLQAVMKDAVLIRKLLAVMAQEQKLPCEMTEITIDKENDSSGAIDRSFLSLLPGQSLTDKLYNIWIRLQSHVNIVFDSDMDKLMLEKYP-GIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDATQREAVAKQLLTPSTGIPKPQGAKVVCRHVKNGDILLLNRQPTLHRPSIQAHRAHILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELVYRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDYTPLNLTGKAKIGSKAWVKEKPRPVPDFDPDS--------MCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPNADVMRQRIIEE----STQCGPRAVRAALNLPEAASCDEIQGKWQDAHLGKDQRDFNMIDMKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVIQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEV----LSRADPQKVLRHFRAIKKWHHRHSSALLRKGAFLSFSQ-KIQAAVKALN-LEGKTQNGRSPETQQMLQMWHELDEQSRRKYQKRAAPCPDPSLSVWRPDIHFASVSETFEKKIDDYSQEWAAQAEKSHNRSELSLDRLRTLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSV----PVFNTKKALRRVKSLKKQLTRVCLGEVLQKVDIQESFCMGEKQNKFRVYELRFQFLPHAYYQQEKCLRPEDILHFMETRFF-KLLMEAIKKK-NSKASAFRSVNTRRATQKDLDDTE-DSGRNRREEERDEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEGEEEEEEDVQEEENIKGEGAHQTHEPDEEEGSGLEEESSQNPPRRHSRPQGAEAMERRIQ----AVRESHSF-IEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHNAIVYTTKGITRCLLNETINSKNEKEFVLNTEGINLPELFKYSEVLDLRRLYSNDIHAVANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1715
BLAST of EMLSAG00000006751 vs. GO
Match: - (symbol:POLR1A "DNA-directed RNA polymerase" species:9913 "Bos taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005736 "DNA-directed RNA polymerase I complex" evidence=IBA] [GO:0006360 "transcription from RNA polymerase I promoter" evidence=IBA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001054 "RNA polymerase I activity" evidence=IBA] InterPro:IPR000722 InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007080 InterPro:IPR007081 InterPro:IPR007083 InterPro:IPR015699 Pfam:PF00623 Pfam:PF04983 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000 SMART:SM00663 GO:GO:0003677 GO:GO:0008270 GO:GO:0006360 GO:GO:0005736 GO:GO:0003899 KO:K02999 OMA:CLLNETT PANTHER:PTHR19376:SF11 OrthoDB:EOG7H1JJM CTD:25885 TreeFam:TF103033 GeneTree:ENSGT00550000074861 EMBL:DAAA02031123 RefSeq:NP_001179805.1 UniGene:Bt.52712 PRIDE:E1BIX2 Ensembl:ENSBTAT00000008496 GeneID:536316 KEGG:bta:536316 NextBio:20876927 Uniprot:E1BIX2) HSP 1 Score: 1251.5 bits (3237), Expect = 0.000e+0 Identity = 719/1752 (41.04%), Postives = 1026/1752 (58.56%), Query Frame = 0
Query: 7 TRNVVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSL-KKKCGECGG--------YTKKISLYQSRFIY----------EGEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCS-DMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEA----------------QEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSD-PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGC---SMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKR--MKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELK--SKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDIN-KIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSY-------LKNNKSDKG---EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTP-SSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLF-GSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEK---------DENKSDEDDESSQKYNEDELLGQKDDIP---IISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDEN----EETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
++N+ +SFGM+S+EE++ LS ITNP + LG+P GLYDL +GP +D CSTC+ F C GH GHI+LPL V NPL + +L L+R SC++CH L L L Q ++L++G + + ++ EE+ T E +E + Q + LQN L ++ V +NV + I F+ V + K+C C + K+++ ++ +G +E + L P Q HL W + L +++ L+D + +FFL+ + PP + RP G M + Q +LQ +++ V ++++++ + +E ++L SE + L + G ++ +L +W LQ+ V+ + D EM+ G +Q++E+K GLFR HMMGKRV++AAR+VI PD YI+ +EIG+P VFA KL+Y PVTPWNV+ELR+ VINGPN+HPGA + E G R + +D QREA+AK LLTP++ P K V RH+ NGD +LLNRQPTLH+PSI +HRARVL EKV+RLHYA CK+YNADFDGDEMNAHFPQ+E+ R+EA L +QYLVPKDG PL GLIQDH+++G M+IRG FF++ +Y +LV+ L + G++K PPAI KP LW+GKQ++ST+++N IP + L K KI W+ ++PR + G SMCES+VI GEL+CGV+DK YG++ Y LVH YE+YGG +S +L+ +R+FT +L GFTLGV DILV+ A+ R I++ + G + ++L + E++ ++++ + +R +D +KE + +N IN AC+P GL ++FPENNLQ+MVQ+GAKGSTVNTMQISCLLGQIELEG+RPP+M SG+SLP F PY+ PRAGGF+ GRF+TGIKP EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLVV YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q FL N + ++ L + ++ +D L+ I+K K R GAFL +S+ ++++ +N + + GRS T +++ W+E D+ S+ ++KK PDP SV+RPD F SV+E E + Y + + G + R ++ K+ +S+ DPGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVASSNIKTP SV F + L+ +L R L +VLE + V E + ++ R+ ++R QFLP Y+ + P IL ++E FF K+L+ I T K+ + ++D+ ++ +++ + E H D E + DADA++ K+ +Q ++ + +EE + E+ E E +E E L G P SR +E +RR ++ I +Y D + LW ++TL P+ + D S+L+ + A +IY K I + L + N +E + T+GIN+ +F++ ++LD+ RL N IH MA YGIEAA R I EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI +N SPLQQMTFET+ FL+ AT+ G D L+SPS+C+++GK GGT F++ Q L
Sbjct: 4 SKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGP-ADSKEVCSTCVQDFTNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVVHLLLCQLRVLEVGALQAVYELERIL----YRFLEENADPTACEIQEE-LEQYTIKILQNNLPGSQGAQV----KNVCESKSKLISVFWKVHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRRADQKDSEPQGIEEAQMGKRGYLTPSSAQEHLIALWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLDFLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQE--QELPSEVAAPTTEEEKDSWMAMDRSFLSQLPGQSLTDRLYNIWIRLQSHVNIVFDSEMDKLMMEKYP-GIRQILEKKDGLFRKHMMGKRVDYAARSVICPDMYISTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNMHPGASMVINEDGSRTALSASDLTQREAVAKQLLTPATGAPKPQGTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRARVLPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFNREQYMELVFRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKIGGKAWVKESPR-----------LVPGFNPDSMCESQVIIRAGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPKADVRRHGIIEDSTHCGPRAVRAALNLPEAVSC--DEVQGKWQDAHLSKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLTSNYEVIMKSKHLHEV----LSRADPQKALRHFRAIKKWHSKHSNTLLRKGAFLNYSQ-KIQAAVKALNLEGTNQNGRSPETYQMLRMWAELDEQSRRKYQKKAAPCPDPSLSVWRPDIYFASVSETFEKKMDDYSCEWAAQAERSYEKSGLSLDSLRTLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSVPVFNTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFRIGEKQNKFRVYQLRFQFLPHAYYQQEKCTRPEDILHFMETRFF-KILMEAIRKKNSKASAFRNVNTRKA-TQRDLDNAGESERNRGEQEGDEEEEGHI-VDAEAEEGDADASDAKRKEKQEEEVDYDSEEEEEKEEEEKEEEDIQEEGTGLKEGVQQEQEEGGWAPEESSLPGAPLTQPQKRARSREPQGAEAVERRAQA-----VRECHPFIEDYQYDTQGSLWCQVTLKLPLMKVNFDMSSLVASLAQGAIIYATKGITRCLLNETINSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATLMGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1716
BLAST of EMLSAG00000006751 vs. GO
Match: - (symbol:POLR1A "DNA-directed RNA polymerase" species:9615 "Canis lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005736 "DNA-directed RNA polymerase I complex" evidence=IBA] [GO:0006360 "transcription from RNA polymerase I promoter" evidence=IBA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001054 "RNA polymerase I activity" evidence=IBA] InterPro:IPR000722 InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007080 InterPro:IPR007081 InterPro:IPR007083 InterPro:IPR015699 Pfam:PF00623 Pfam:PF04983 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000 SMART:SM00663 GO:GO:0003677 GO:GO:0008270 GO:GO:0006360 GO:GO:0005736 GO:GO:0003899 OMA:CLLNETT PANTHER:PTHR19376:SF11 TreeFam:TF103033 GeneTree:ENSGT00550000074861 EMBL:AAEX03010931 Ensembl:ENSCAFT00000012228 Uniprot:E2R0G4) HSP 1 Score: 1251.11 bits (3236), Expect = 0.000e+0 Identity = 725/1776 (40.82%), Postives = 1040/1776 (58.56%), Query Frame = 0
Query: 7 TRNVVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTH-STRNVEALRKTCIKDFFNVSL-KKKCGECGG--------YTKKISLYQSRFIYEGED-------EDASKNKTE-----------LNPEELQRHLRETWLKDSN--ILKFMYPMLKDCSDME---HPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESS------------EDLSSEA--QEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSD-PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKR--MKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELK--SKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDP-KTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSY-----LKNNKSDKG-----EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTP-SSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLF-GSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASS---------------------DEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENK--SDEDDESSQKYNEDELLGQKDDIPII-----SRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDEN----EETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
++N+ +SFGM+S+EE++ LS ITNP + LG+P GLYDL +GP +D CSTC+ F+ C GH GHIELPL V NPL + +L L+R SC++CH L L + Q ++L++G + + ++ EE+ T + +E + Q +QN L P H +NV R I F+ + K+C C + K+++ +++ D E+A+ +K L P + HL W + L +++ L+D DME +P+ +FFL+ + PP + RP G M + Q +LQ +++ + ++++++ + +E E SS A + L + G ++ KL +W LQ+ V+ + D EM+ G +Q++E+K GLFR HMMGKRV++AAR+VI PD YIN +EIG+P VFA KL+Y PVTPWNV+ELR+ VINGPNVHPGA + E G R + D QREA+AK LLTP++ P K V RH+ NGD +LLNRQPTLH+PSI +H AR+L EKV+RLHYA CK+YNADFDGDEMNAHFPQ+E+ R+EA L +QYLVPKDG PL GLIQDH+++G M+IRG FF + +Y +L+Y L + G++K PPAI KP LW+GKQ++ST+++N IP ++L K KI W+ ++PRP S MCES+VI GEL+CGV+DK YG++ Y LVH YE+YGG +S ++L+ +R+FT +L GFTLGV DILV+ A+ R ++++ + G + +LN + E+R ++++ +R +D +KE + +N IN AC+P GL ++FP+NNLQ+MVQ+GAKGSTVNTMQISCLLGQIELEG+RPP+M SG+SLP F PY+ PRAGGF+ GRF+TGIKP EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLVV YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q FL N K ++ L + ++ +D L+ I+K + K R GAFL +S+ ++++ +N D + GRS T+ ++K W E D+ S+ ++KK PDP +V+RPD F SV+E E + Y + KS K ++ R ++ K+ +S+ DPGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS+NIKTP SV F L+ +L R L +VLE + V E + + ++ ++R QFLP Y+ + + P IL ++E FF K+L+ + +K + +S + +D D+S + ++ + A E+ S D E + DADA++ K+ +Q ++ E +E + D + E + S +Q+ NE+ G +D P +S E Q + + +++ I +Y D ++ LW ++T+ P+ + D ++L+ + A V+Y K I + L + N +E + T+GIN+ +F++ ++LD++RL N IH MA YGIEAA R I EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI +N SPLQQMTFET+ FL+ AT+ G D L+SPS+C+++GK GGT F++ Q L
Sbjct: 4 SKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGP-ADSKEVCSTCVQDFNNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLLVCQLRVLEVGALQAVYELERIL----NRFLEENADPTAFKIQEE-LEQYTAKIVQNNLLG---PHGAHVEVKNVCDSRSKLIAYFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTVTYPAMVHKKADQKDTEPLEEAAGDKKGIEETQLGKRGYLTPTSAREHLTALWKNEDTGFFLNYLFSGLEDV-DMESRFNPS-VFFLDFLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCEVSGPAKDEEKDSSIALDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYP-GIRQILEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAIDLTQREAVAKQLLTPATGAPKPQGTKIVCRHVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELLYRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLSLSGKAKISGKAWVQESPRPVPGFNPDS--------MCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTCLARLFTAYLQLYRGFTLGVEDILVKRKADMKRHLVIEESTHCGPRAVRA--ALNLPEAASCDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPDNNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYKVIMKSKYLHEV----LSRADPQKALRHFRAIKKWQSKHSNALQRKGAFLNYSQ-KIQAAVKALNLEDGNQNGRSLGTHQILKMWGELDEQSRRKYQKKAAPCPDPSLAVWRPDIYFASVSETFEKKVDDYSLEWAAQAEKSYKKSELSLDRLRTLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLEKIDVQESFCIGEKQDKFQVYQLRFQFLPHAYYQQEKCLRPEDILHFMETRFF-KILMESL------RKKNNKASAFRSVNTRRATQRDLDNSGESERNRLSQARENTGSLAFLKSQGEQEGNEEEEGPIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEVEEENEDEDMQEEEHISGNSAHKAQEQNEEVGSGPEDSPPATPLTQPRKSTQNREPQGAEAKERRVQAVRESHPFIEDYQYDTEESLWCQVTVKLPLMKINFDMTSLVMSLAQSAVVYATKGITRCLLNETTNKKNEKELVLNTEGINLPELFKYAEVLDLSRLYSNDIHAMASTYGIEAALRVIEKEIRDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMMGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1745
BLAST of EMLSAG00000006751 vs. C. finmarchicus
Match: gi|592861481|gb|GAXK01096081.1| (TSA: Calanus finmarchicus comp54535_c3_seq1 transcribed RNA sequence) HSP 1 Score: 1470.29 bits (3805), Expect = 0.000e+0 Identity = 759/1396 (54.37%), Postives = 961/1396 (68.84%), Query Frame = 0
Query: 1 MGSL----KKTRNVVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDR-YMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMD----HLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIYEG------EDED----------------ASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDP--GEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLG--SLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELXXXXXXXXXXXXXXXXXDGAFLRFSRDNSES-------SMHDINKIDPK--TGRSFRTNFLIKKWSEDDDSQNHFKKKYVQ---VPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKGE----QFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGT 1345
MG L K R+ VH EA +L+FG++S E+RNLS + ITNP SFNQLGHP++ GLYDLRMGPYSDR M+C+TC L + CPGH GHIELP+PVVN LFY +L +++ +C+ CHK KTLFL+QQKLLD GLI +Q + EE ++ D + KL + HL ++ P V +TR++E LRK K + C +CG TKKI+LY+SRFIYEG DED + K+E+NP EL+ H R + +D +L ++P++K SD+ HPTD+ F+ V+ PPP++RP Q+TG ++T HPQ +LQ +VE V ++K +V+ + + ++L E QEM++++RGD+ +L+ VWK LQN VDH++DR+MNAS+ GWGFKQLIERK GLFRMHMMGKRVN A RTVI PDP I DEIGLPEVFAKKLSY VPVTPWNV ELRE+VINGPNVHPG + +E E GQ+ +++ ND QRE +AKTLLTPS + G + K VYRHL NGD MLLNRQPTLHKP I++ RARVLKGEKVMRLHY+ CKS+NADFDGDEMNAHFPQ+EVAR+EA NLV S +LVPKDGTPLQGLIQDHVIA VKMS+RGRFF + +YQQLVY AL++V GKIK PPAI KP++LWSGKQIIST+I N +P + L S KIK +W++ PRPWK G S+ M ESE I NGEL CG++DK Q+G T YSL+ + ELYGG S++LLSAFS++FTNF+ +EGF+LGV DI+V +AN+ R +M + + +G+ CA +GV + + L +L HR S P++RM +D+G+K L P TN +N+ CLP GLIKKFP NNLQLMV GAKGS+VNTMQISCLLGQIELEGKRPPIMISGRSLPSF PYDTQPRAGGFIDGRFMTGI+PQEFFFHCMAGREGLIDTA KTSRSGYLQRCLIKLLEGLVV YD+TVR+SDGSV+QF+YGEDS+DVC +QYI ++ +L +NM+S N ++ + + + + K +++K K G K R G FL+F + S SM + K D R T L+ + + F++ P P + F P +FGS+ EKV+ LI+ Y+ + K+ E QFRD+MY K ++ V GEPVG++A QSVGEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS+NIKTPS I F V E E DK+R+K NR ++D+LE V VTEKI L R R++++R +FLP K YK +F V P +L Y E+ F KVL+P++ +KK++VE+G
Sbjct: 60 MGELRYSGKALRDPVHIEADSLTFGLYSGAEVRNLSTVHITNPVSFNQLGHPLESGLYDLRMGPYSDRDNMTCTTCHLNSEHCPGHIGHIELPMPVVNSLFYSTILRMLKITCLHCHKFKMPEYFKTLFLIQQKLLDAGLINAAQTAGEIAERKEDR--EERKKGVINQAEDMAMNIKLKEFADQHLFDITSQTYIPGV--NTRSIEGLRKEYCKKLMLQGKETTCPQCGASTKKITLYKSRFIYEGLKMSDTGDEDDIELDLMGVKKRTTRGGEREKSEMNPTELRDHFRSLYSQDHELLGHLFPVMKR-SDLAHPTDVLFMEVLPVPPPRARPVQFTGGLLTQHPQSQALQNVVEAVALIKPLVKVMQGQDVKELGQETQEMIKSLRGDSTSGQLDLVWKELQNHVDHVIDRDMNASRNQKIGWGFKQLIERKQGLFRMHMMGKRVNHACRTVICPDPNIGTDEIGLPEVFAKKLSYQVPVTPWNVAELREMVINGPNVHPGCVMVENEFGQKTILEENDRSQREGIAKTLLTPSYEGAVGSGRPKIVYRHLKNGDAMLLNRQPTLHKPGILALRARVLKGEKVMRLHYSNCKSFNADFDGDEMNAHFPQSEVARAEAYNLVSSSRNFLVPKDGTPLQGLIQDHVIAAVKMSLRGRFFPRGDYQQLVYGALVDVPGKIKLYPPAILKPQELWSGKQIISTVITNLVPKNKLPPNLTSTAKIKPKEWISTPPRPWKA---GGGSLCSPLDMTESEFIVRNGELCCGILDKQQFGPTPYSLIMLYCELYGGDFSAKLLSAFSKMFTNFIRSEGFSLGVEDIIVTKEANQERAAVMARTEKVGNSCAATGVGIKGDYTEEQLKHKLEAAHRASAAVPKRRMDIDRGFKAALNPATNEVNACCLPAGLIKKFPHNNLQLMVNTGAKGSSVNTMQISCLLGQIELEGKRPPIMISGRSLPSFKPYDTQPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTACKTSRSGYLQRCLIKLLEGLVVGYDMTVRESDGSVIQFKYGEDSMDVCLAQYIKKGKLEYLAENMESAYNKE--DVVRAKAVTDLKGVKKAKKEVKKWNKIHAGQKGRQGTFLQFCKVFGSSVAGIEGFSMTKVGKGDSDIVINRPKSTMALLDTYRQIPKDIGEFQEVAAASTLCPPPVSDTFYPSCHFGSLTEKVDSLIEDYVSSRKASNKELDSDQFRDMMYMKAQQATVCAGEPVGIIAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPSMDIPFREGVGEKEMDKMRLKFNRVLIADLLEQVVVTEKIQL-KPQRARLVELRFEFLPHKNYKQNFGVKPGQVLEYFEKKFIMKVLMPVLSGVTKEKKVLVESGV 4214 HSP 2 Score: 278.1 bits (710), Expect = 1.944e-74 Identity = 125/231 (54.11%), Postives = 176/231 (76.19%), Query Frame = 0
Query: 1454 SISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKLS 1684
++++ E +RR V L + I++Y+ D +K+ W+ +TL F + +K++D S +++ AA K V+YE+KNI ++++ +D+ + + T+GINI+AMF +D +LDI + CN+IHDMA+YYGIEAAN+TI +EI VF YGI ++ RHL+LIAD+MTFDG+YKPFNRVGIENN SPLQQMTFETA+GFLR AT+ GK DNL SPS+C++LGKP GGT SF +MQ+LS
Sbjct: 4602 AMASGEPARRRADVLRLLDGRGGVASIVDYSYDTEKQSWATLTLSFDIARKRVDMSQVLRVAAGKAVVYEVKNIKRSFVLEDKGK-MILKTEGINIDAMFHYDHILDIKSMGCNNIHDMAKYYGIEAANQTIVNEITGVFNVYGIEVDKRHLSLIADFMTFDGNYKPFNRVGIENNASPLQQMTFETAMGFLRQATLGGKVDNLTSPSACVVLGKPTRGGTGSFNLMQRLS 5291
BLAST of EMLSAG00000006751 vs. C. finmarchicus
Match: gi|592931935|gb|GAXK01026618.1| (TSA: Calanus finmarchicus comp19535_c2_seq2 transcribed RNA sequence) HSP 1 Score: 390.193 bits (1001), Expect = 4.080e-110 Identity = 304/1013 (30.01%), Postives = 475/1013 (46.89%), Query Frame = 0
Query: 18 LSFGMFSSEEIRNLSAME--ITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGY---TKKISLYQSRFIYEGEDEDASKNKTELNPEELQRHLRETWLKDSNIL----KFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSE--DLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREM----NASQKNSSGWGFKQLIER---KTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTN--RINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSL 1010
+ FG+ EEIR +S E I P + + G P GGL D R G DR C TC CPGHFGHI+L PV +P F + + ++R C F K + K+ ++ + + Q + T + + + E DE MD + D+ P+ TH G CG Y +++ L S ++ +ED + K L E + R ++ I+ KF P D + + PP RP +M +N ++ + + D+ E++R + L+ K+LQ V L D +M A QK SG K L R K G R ++MGKRV+F+ARTVITPDPY+ ID++G+P A+ L++ VTP+N+++++ LV G + +PG+ +I ++G+R + SSD V RH+ +GD ++ NRQPTLHK S+M HR +VL R++ + YNADFDGDEMN H PQ+ R+E +N+ Q + P+ P+ G++QD + A KM+ R F DQ + L+ L + GK+ PAI KPK LW+GKQ+ S II S+ + ++ S+ ++N P+ H + G ++ V+ NGEL+ G+ K G + SL+H G + + N+L EG ++G+ D + ++I + ++S V +N +++ H++ + P + + ++ ++ + N R + + + +F NN ++MV AG+KGS +N Q+ +GQ +EGKR P R+LP F+ D P + GF++ ++ G+ P EFFFH M GREGLIDTAVKT+ +GY+QR LIK +E +VNYD TVR+S G ++Q +YGED L
Sbjct: 2598 VQFGILGPEEIRRMSVTEGGIKFPEVY-EGGRPKLGGLMDPRQGAV-DRTSRCQTCAGNMTECPGHFGHIDLAKPVFHPGFLTKTIKVLRCVC-------FYCSKLLVTPTNPKIKEIVMKSKGQPRKRI-----THIYDLCKGKKICEGGDE------MDTNPDNPDNQTNPTKTH-------------------------GGCGRYQPTIRRVGLDMSAE-WKQVNEDTQEKKIVLTAERVHEIFRHISDEECFIVGMDPKFARP------------DWMLVTALPVPPLCVRP-----------------------AVVMFGSARNQDDLTHKLADILKANNELIRNEQAGAAAHILSENVKMLQFHVATLTDNDMPGLPRAMQK--SGRPLKALKARLKGKEGRIRGNLMGKRVDFSARTVITPDPYLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQALVRRGNSQYPGSKYIIRDTGER-------------IDLRFHPKSSDLHLQCGYKVERHIRDGDLVVFNRQPTLHKMSMMGHRVKVLPW-STFRMNLSDTSPYNADFDGDEMNLHVPQSMETRAELENIHMTPRQIITPQCNQPVMGIVQDTLTAVRKMTKRDVFIDQEQMMTLLM-FLPSWDGKMPI--PAILKPKPLWTGKQLFSLIIPGSV----------NCMRLHSTHPDDENGGPY-------HWISPG----DTRVLIENGELIMGITCKKTLGTSAGSLMHVCQLEVGHRLNGLFYGDIQTVVNNWLMLEGHSIGIGDTIADPGT----------YQDILNTISSSKVEVN-------EVIQKAHKDQLE-PTPGNTLRQTFENQVNRILNDARDKTGGSAKRSLTEF--NNFKVMVVAGSKGSDINVSQVIACVGQQNVEGKRIPFGFRKRTLPHFVKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEACMVNYDGTVRNSVGQLIQLRYGEDGL 5213 HSP 2 Score: 81.2629 bits (199), Expect = 3.016e-14 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 0
Query: 1176 KYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFL 1246
++ ++ GE VG LA QS+GEP+TQMTLNTFHFAG NVTLG+PRL+EI+ + S N K PS + L
Sbjct: 1854 RFQQAQCAAGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINI-SKNPKAPSLTVFLL 2063 HSP 3 Score: 62.7734 bits (151), Expect = 1.337e-8 Identity = 41/143 (28.67%), Postives = 69/143 (48.25%), Query Frame = 0
Query: 1539 ETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGI-ENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIM 1680
E + TDG + + D+ D R N I ++ GIEA +++ E+ V YG+ +N+RHL+++ D MT G R GI + L + +FE + L A + D ++ S II+G+ GT+ F ++
Sbjct: 867 EWLLETDGTALMKVLAERDV-DPIRTCSNDICEIFACLGIEAVRKSVEKEMDLVLSFYGLYVNYRHLSMLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLEAAAHAEVDPMRGVSENIIMGQLPRMGTACFDLL 1292
BLAST of EMLSAG00000006751 vs. C. finmarchicus
Match: gi|592931939|gb|GAXK01026614.1| (TSA: Calanus finmarchicus comp19535_c1_seq3 transcribed RNA sequence) HSP 1 Score: 389.808 bits (1000), Expect = 4.581e-110 Identity = 304/1013 (30.01%), Postives = 475/1013 (46.89%), Query Frame = 0
Query: 18 LSFGMFSSEEIRNLSAME--ITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGY---TKKISLYQSRFIYEGEDEDASKNKTELNPEELQRHLRETWLKDSNIL----KFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSE--DLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREM----NASQKNSSGWGFKQLIER---KTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTN--RINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSL 1010
+ FG+ EEIR +S E I P + + G P GGL D R G DR C TC CPGHFGHI+L PV +P F + + ++R C F K + K+ ++ + + Q + T + + + E DE MD + D+ P+ TH G CG Y +++ L S ++ +ED + K L E + R ++ I+ KF P D + + PP RP +M +N ++ + + D+ E++R + L+ K+LQ V L D +M A QK SG K L R K G R ++MGKRV+F+ARTVITPDPY+ ID++G+P A+ L++ VTP+N+++++ LV G + +PG+ +I ++G+R + SSD V RH+ +GD ++ NRQPTLHK S+M HR +VL R++ + YNADFDGDEMN H PQ+ R+E +N+ Q + P+ P+ G++QD + A KM+ R F DQ + L+ L + GK+ PAI KPK LW+GKQ+ S II S+ + ++ S+ ++N P+ H + G ++ V+ NGEL+ G+ K G + SL+H G + + N+L EG ++G+ D + ++I + ++S V +N +++ H++ + P + + ++ ++ + N R + + + +F NN ++MV AG+KGS +N Q+ +GQ +EGKR P R+LP F+ D P + GF++ ++ G+ P EFFFH M GREGLIDTAVKT+ +GY+QR LIK +E +VNYD TVR+S G ++Q +YGED L
Sbjct: 91 VQFGILGPEEIRRMSVTEGGIKFPEVY-EGGRPKLGGLMDPRQGAV-DRTSRCQTCAGNMTECPGHFGHIDLAKPVFHPGFLTKTIKVLRCVC-------FYCSKLLVTPTNPKIKEIVMKSKGQPRKRI-----THIYDLCKGKKICEGGDE------MDTNPDNPDNQTNPTKTH-------------------------GGCGRYQPTIRRVGLDMSAE-WKQVNEDTQEKKIVLTAERVHEIFRHISDEECFIVGMDPKFARP------------DWMLVTALPVPPLCVRP-----------------------AVVMFGSARNQDDLTHKLADILKANNELIRNEQAGAAAHILSENVKMLQFHVATLTDNDMPGLPRAMQK--SGRPLKALKARLKGKEGRIRGNLMGKRVDFSARTVITPDPYLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQALVRRGNSQYPGSKYIIRDTGER-------------IDLRFHPKSSDLHLQCGYKVERHIRDGDLVVFNRQPTLHKMSMMGHRVKVLPW-STFRMNLSDTSPYNADFDGDEMNLHVPQSMETRAELENIHMTPRQIITPQCNQPVMGIVQDTLTAVRKMTKRDVFIDQEQMMTLLM-FLPSWDGKMPI--PAILKPKPLWTGKQLFSLIIPGSV----------NCMRLHSTHPDDENGGPY-------HWISPG----DTRVLIENGELIMGITCKKTLGTSAGSLMHVCQLEVGHRLNGLFYGDIQTVVNNWLMLEGHSIGIGDTIADPGT----------YQDILNTISSSKVEVN-------EVIQKAHKDQLE-PTPGNTLRQTFENQVNRILNDARDKTGGSAKRSLTEF--NNFKVMVVAGSKGSDINVSQVIACVGQQNVEGKRIPFGFRKRTLPHFVKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEACMVNYDGTVRNSVGQLIQLRYGEDGL 2706 HSP 2 Score: 81.2629 bits (199), Expect = 3.016e-14 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 0
Query: 1176 KYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFL 1246
++ ++ GE VG LA QS+GEP+TQMTLNTFHFAG NVTLG+PRL+EI+ + S N K PS + L
Sbjct: 3241 RFQQAQCAAGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINI-SKNPKAPSLTVFLL 3450 HSP 3 Score: 62.7734 bits (151), Expect = 1.130e-8 Identity = 41/143 (28.67%), Postives = 69/143 (48.25%), Query Frame = 0
Query: 1539 ETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGI-ENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIM 1680
E + TDG + + D+ D R N I ++ GIEA +++ E+ V YG+ +N+RHL+++ D MT G R GI + L + +FE + L A + D ++ S II+G+ GT+ F ++
Sbjct: 4012 EWLLETDGTALMKVLAERDV-DPIRTCSNDICEIFACLGIEAVRKSVEKEMDLVLSFYGLYVNYRHLSMLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMEAAAHAEVDPMRGVSENIIMGQLPRMGTACFDLL 4437
BLAST of EMLSAG00000006751 vs. C. finmarchicus
Match: gi|592931940|gb|GAXK01026613.1| (TSA: Calanus finmarchicus comp19535_c1_seq2 transcribed RNA sequence) HSP 1 Score: 389.808 bits (1000), Expect = 4.756e-110 Identity = 304/1013 (30.01%), Postives = 475/1013 (46.89%), Query Frame = 0
Query: 18 LSFGMFSSEEIRNLSAME--ITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGY---TKKISLYQSRFIYEGEDEDASKNKTELNPEELQRHLRETWLKDSNIL----KFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSE--DLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREM----NASQKNSSGWGFKQLIER---KTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTN--RINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSL 1010
+ FG+ EEIR +S E I P + + G P GGL D R G DR C TC CPGHFGHI+L PV +P F + + ++R C F K + K+ ++ + + Q + T + + + E DE MD + D+ P+ TH G CG Y +++ L S ++ +ED + K L E + R ++ I+ KF P D + + PP RP +M +N ++ + + D+ E++R + L+ K+LQ V L D +M A QK SG K L R K G R ++MGKRV+F+ARTVITPDPY+ ID++G+P A+ L++ VTP+N+++++ LV G + +PG+ +I ++G+R + SSD V RH+ +GD ++ NRQPTLHK S+M HR +VL R++ + YNADFDGDEMN H PQ+ R+E +N+ Q + P+ P+ G++QD + A KM+ R F DQ + L+ L + GK+ PAI KPK LW+GKQ+ S II S+ + ++ S+ ++N P+ H + G ++ V+ NGEL+ G+ K G + SL+H G + + N+L EG ++G+ D + ++I + ++S V +N +++ H++ + P + + ++ ++ + N R + + + +F NN ++MV AG+KGS +N Q+ +GQ +EGKR P R+LP F+ D P + GF++ ++ G+ P EFFFH M GREGLIDTAVKT+ +GY+QR LIK +E +VNYD TVR+S G ++Q +YGED L
Sbjct: 91 VQFGILGPEEIRRMSVTEGGIKFPEVY-EGGRPKLGGLMDPRQGAV-DRTSRCQTCAGNMTECPGHFGHIDLAKPVFHPGFLTKTIKVLRCVC-------FYCSKLLVTPTNPKIKEIVMKSKGQPRKRI-----THIYDLCKGKKICEGGDE------MDTNPDNPDNQTNPTKTH-------------------------GGCGRYQPTIRRVGLDMSAE-WKQVNEDTQEKKIVLTAERVHEIFRHISDEECFIVGMDPKFARP------------DWMLVTALPVPPLCVRP-----------------------AVVMFGSARNQDDLTHKLADILKANNELIRNEQAGAAAHILSENVKMLQFHVATLTDNDMPGLPRAMQK--SGRPLKALKARLKGKEGRIRGNLMGKRVDFSARTVITPDPYLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQALVRRGNSQYPGSKYIIRDTGER-------------IDLRFHPKSSDLHLQCGYKVERHIRDGDLVVFNRQPTLHKMSMMGHRVKVLPW-STFRMNLSDTSPYNADFDGDEMNLHVPQSMETRAELENIHMTPRQIITPQCNQPVMGIVQDTLTAVRKMTKRDVFIDQEQMMTLLM-FLPSWDGKMPI--PAILKPKPLWTGKQLFSLIIPGSV----------NCMRLHSTHPDDENGGPY-------HWISPG----DTRVLIENGELIMGITCKKTLGTSAGSLMHVCQLEVGHRLNGLFYGDIQTVVNNWLMLEGHSIGIGDTIADPGT----------YQDILNTISSSKVEVN-------EVIQKAHKDQLE-PTPGNTLRQTFENQVNRILNDARDKTGGSAKRSLTEF--NNFKVMVVAGSKGSDINVSQVIACVGQQNVEGKRIPFGFRKRTLPHFVKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEACMVNYDGTVRNSVGQLIQLRYGEDGL 2706 HSP 2 Score: 81.2629 bits (199), Expect = 3.019e-14 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 0
Query: 1176 KYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFL 1246
++ ++ GE VG LA QS+GEP+TQMTLNTFHFAG NVTLG+PRL+EI+ + S N K PS + L
Sbjct: 3241 RFQQAQCAAGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINI-SKNPKAPSLTVFLL 3450 HSP 3 Score: 62.7734 bits (151), Expect = 1.130e-8 Identity = 41/143 (28.67%), Postives = 69/143 (48.25%), Query Frame = 0
Query: 1539 ETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGI-ENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIM 1680
E + TDG + + D+ D R N I ++ GIEA +++ E+ V YG+ +N+RHL+++ D MT G R GI + L + +FE + L A + D ++ S II+G+ GT+ F ++
Sbjct: 4012 EWLLETDGTALMKVLAERDV-DPIRTCSNDICEIFACLGIEAVRKSVEKEMDLVLSFYGLYVNYRHLSMLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMEAAAHAEVDPMRGVSENIIMGQLPRMGTACFDLL 4437
BLAST of EMLSAG00000006751 vs. C. finmarchicus
Match: gi|592931936|gb|GAXK01026617.1| (TSA: Calanus finmarchicus comp19535_c2_seq1 transcribed RNA sequence) HSP 1 Score: 390.193 bits (1001), Expect = 5.396e-110 Identity = 304/1013 (30.01%), Postives = 475/1013 (46.89%), Query Frame = 0
Query: 18 LSFGMFSSEEIRNLSAME--ITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGY---TKKISLYQSRFIYEGEDEDASKNKTELNPEELQRHLRETWLKDSNIL----KFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSE--DLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREM----NASQKNSSGWGFKQLIER---KTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTN--RINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSL 1010
+ FG+ EEIR +S E I P + + G P GGL D R G DR C TC CPGHFGHI+L PV +P F + + ++R C F K + K+ ++ + + Q + T + + + E DE MD + D+ P+ TH G CG Y +++ L S ++ +ED + K L E + R ++ I+ KF P D + + PP RP +M +N ++ + + D+ E++R + L+ K+LQ V L D +M A QK SG K L R K G R ++MGKRV+F+ARTVITPDPY+ ID++G+P A+ L++ VTP+N+++++ LV G + +PG+ +I ++G+R + SSD V RH+ +GD ++ NRQPTLHK S+M HR +VL R++ + YNADFDGDEMN H PQ+ R+E +N+ Q + P+ P+ G++QD + A KM+ R F DQ + L+ L + GK+ PAI KPK LW+GKQ+ S II S+ + ++ S+ ++N P+ H + G ++ V+ NGEL+ G+ K G + SL+H G + + N+L EG ++G+ D + ++I + ++S V +N +++ H++ + P + + ++ ++ + N R + + + +F NN ++MV AG+KGS +N Q+ +GQ +EGKR P R+LP F+ D P + GF++ ++ G+ P EFFFH M GREGLIDTAVKT+ +GY+QR LIK +E +VNYD TVR+S G ++Q +YGED L
Sbjct: 2751 VQFGILGPEEIRRMSVTEGGIKFPEVY-EGGRPKLGGLMDPRQGAV-DRTSRCQTCAGNMTECPGHFGHIDLAKPVFHPGFLTKTIKVLRCVC-------FYCSKLLVTPTNPKIKEIVMKSKGQPRKRI-----THIYDLCKGKKICEGGDE------MDTNPDNPDNQTNPTKTH-------------------------GGCGRYQPTIRRVGLDMSAE-WKQVNEDTQEKKIVLTAERVHEIFRHISDEECFIVGMDPKFARP------------DWMLVTALPVPPLCVRP-----------------------AVVMFGSARNQDDLTHKLADILKANNELIRNEQAGAAAHILSENVKMLQFHVATLTDNDMPGLPRAMQK--SGRPLKALKARLKGKEGRIRGNLMGKRVDFSARTVITPDPYLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQALVRRGNSQYPGSKYIIRDTGER-------------IDLRFHPKSSDLHLQCGYKVERHIRDGDLVVFNRQPTLHKMSMMGHRVKVLPW-STFRMNLSDTSPYNADFDGDEMNLHVPQSMETRAELENIHMTPRQIITPQCNQPVMGIVQDTLTAVRKMTKRDVFIDQEQMMTLLM-FLPSWDGKMPI--PAILKPKPLWTGKQLFSLIIPGSV----------NCMRLHSTHPDDENGGPY-------HWISPG----DTRVLIENGELIMGITCKKTLGTSAGSLMHVCQLEVGHRLNGLFYGDIQTVVNNWLMLEGHSIGIGDTIADPGT----------YQDILNTISSSKVEVN-------EVIQKAHKDQLE-PTPGNTLRQTFENQVNRILNDARDKTGGSAKRSLTEF--NNFKVMVVAGSKGSDINVSQVIACVGQQNVEGKRIPFGFRKRTLPHFVKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEACMVNYDGTVRNSVGQLIQLRYGEDGL 5366 HSP 2 Score: 81.2629 bits (199), Expect = 3.037e-14 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 0
Query: 1176 KYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFL 1246
++ ++ GE VG LA QS+GEP+TQMTLNTFHFAG NVTLG+PRL+EI+ + S N K PS + L
Sbjct: 2007 RFQQAQCAAGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINI-SKNPKAPSLTVFLL 2216 HSP 3 Score: 62.7734 bits (151), Expect = 1.343e-8 Identity = 41/143 (28.67%), Postives = 69/143 (48.25%), Query Frame = 0
Query: 1539 ETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGI-ENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIM 1680
E + TDG + + D+ D R N I ++ GIEA +++ E+ V YG+ +N+RHL+++ D MT G R GI + L + +FE + L A + D ++ S II+G+ GT+ F ++
Sbjct: 1020 EWLLETDGTALMKVLAERDV-DPIRTCSNDICEIFACLGIEAVRKSVEKEMDLVLSFYGLYVNYRHLSMLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLEAAAHAEVDPMRGVSENIIMGQLPRMGTACFDLL 1445
BLAST of EMLSAG00000006751 vs. C. finmarchicus
Match: gi|592931941|gb|GAXK01026612.1| (TSA: Calanus finmarchicus comp19535_c1_seq1 transcribed RNA sequence) HSP 1 Score: 389.808 bits (1000), Expect = 5.891e-110 Identity = 304/1013 (30.01%), Postives = 475/1013 (46.89%), Query Frame = 0
Query: 18 LSFGMFSSEEIRNLSAME--ITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGY---TKKISLYQSRFIYEGEDEDASKNKTELNPEELQRHLRETWLKDSNIL----KFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSE--DLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREM----NASQKNSSGWGFKQLIER---KTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTN--RINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSL 1010
+ FG+ EEIR +S E I P + + G P GGL D R G DR C TC CPGHFGHI+L PV +P F + + ++R C F K + K+ ++ + + Q + T + + + E DE MD + D+ P+ TH G CG Y +++ L S ++ +ED + K L E + R ++ I+ KF P D + + PP RP +M +N ++ + + D+ E++R + L+ K+LQ V L D +M A QK SG K L R K G R ++MGKRV+F+ARTVITPDPY+ ID++G+P A+ L++ VTP+N+++++ LV G + +PG+ +I ++G+R + SSD V RH+ +GD ++ NRQPTLHK S+M HR +VL R++ + YNADFDGDEMN H PQ+ R+E +N+ Q + P+ P+ G++QD + A KM+ R F DQ + L+ L + GK+ PAI KPK LW+GKQ+ S II S+ + ++ S+ ++N P+ H + G ++ V+ NGEL+ G+ K G + SL+H G + + N+L EG ++G+ D + ++I + ++S V +N +++ H++ + P + + ++ ++ + N R + + + +F NN ++MV AG+KGS +N Q+ +GQ +EGKR P R+LP F+ D P + GF++ ++ G+ P EFFFH M GREGLIDTAVKT+ +GY+QR LIK +E +VNYD TVR+S G ++Q +YGED L
Sbjct: 91 VQFGILGPEEIRRMSVTEGGIKFPEVY-EGGRPKLGGLMDPRQGAV-DRTSRCQTCAGNMTECPGHFGHIDLAKPVFHPGFLTKTIKVLRCVC-------FYCSKLLVTPTNPKIKEIVMKSKGQPRKRI-----THIYDLCKGKKICEGGDE------MDTNPDNPDNQTNPTKTH-------------------------GGCGRYQPTIRRVGLDMSAE-WKQVNEDTQEKKIVLTAERVHEIFRHISDEECFIVGMDPKFARP------------DWMLVTALPVPPLCVRP-----------------------AVVMFGSARNQDDLTHKLADILKANNELIRNEQAGAAAHILSENVKMLQFHVATLTDNDMPGLPRAMQK--SGRPLKALKARLKGKEGRIRGNLMGKRVDFSARTVITPDPYLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQALVRRGNSQYPGSKYIIRDTGER-------------IDLRFHPKSSDLHLQCGYKVERHIRDGDLVVFNRQPTLHKMSMMGHRVKVLPW-STFRMNLSDTSPYNADFDGDEMNLHVPQSMETRAELENIHMTPRQIITPQCNQPVMGIVQDTLTAVRKMTKRDVFIDQEQMMTLLM-FLPSWDGKMPI--PAILKPKPLWTGKQLFSLIIPGSV----------NCMRLHSTHPDDENGGPY-------HWISPG----DTRVLIENGELIMGITCKKTLGTSAGSLMHVCQLEVGHRLNGLFYGDIQTVVNNWLMLEGHSIGIGDTIADPGT----------YQDILNTISSSKVEVN-------EVIQKAHKDQLE-PTPGNTLRQTFENQVNRILNDARDKTGGSAKRSLTEF--NNFKVMVVAGSKGSDINVSQVIACVGQQNVEGKRIPFGFRKRTLPHFVKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEACMVNYDGTVRNSVGQLIQLRYGEDGL 2706 HSP 2 Score: 81.2629 bits (199), Expect = 3.034e-14 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 0
Query: 1176 KYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFL 1246
++ ++ GE VG LA QS+GEP+TQMTLNTFHFAG NVTLG+PRL+EI+ + S N K PS + L
Sbjct: 3241 RFQQAQCAAGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINI-SKNPKAPSLTVFLL 3450 HSP 3 Score: 62.7734 bits (151), Expect = 1.134e-8 Identity = 41/143 (28.67%), Postives = 69/143 (48.25%), Query Frame = 0
Query: 1539 ETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGI-ENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIM 1680
E + TDG + + D+ D R N I ++ GIEA +++ E+ V YG+ +N+RHL+++ D MT G R GI + L + +FE + L A + D ++ S II+G+ GT+ F ++
Sbjct: 4012 EWLLETDGTALMKVLAERDV-DPIRTCSNDICEIFACLGIEAVRKSVEKEMDLVLSFYGLYVNYRHLSMLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMEAAAHAEVDPMRGVSENIIMGQLPRMGTACFDLL 4437
BLAST of EMLSAG00000006751 vs. C. finmarchicus
Match: gi|592924798|gb|GAXK01033617.1| (TSA: Calanus finmarchicus comp82623_c1_seq2 transcribed RNA sequence) HSP 1 Score: 276.559 bits (706), Expect = 2.816e-79 Identity = 174/509 (34.18%), Postives = 266/509 (52.26%), Query Frame = 0
Query: 509 PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGK--IKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFS-KTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYEL---YGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLD 1011
PG+ V RH+I+GD +L NRQP+LH+ SIM+HRA++L+G + R + VC YNADFDGDEMN H PQ E AR+EA L+G + + P++G + QD + G ++ + FFD+ + Q++ L + PP I KP+ LW+GKQ+ S ++ P +++ L + +TK K S++ K + +S V+ N EL+ G +DK+ G+ S + FY L +G ++ + + +R+ + FL GF++G+ D+ + ++KQ K + D SG + +R+ E Q ++ + + + I L N M G+KGS +N Q+ +GQ + GKR P RSLP F + P A GF+ F +G+ P EFFFH M GREGL+DTAVKT+ +GY+QR L+K LE L + YD+TVR+S G V+QF+YG D+LD
Sbjct: 130 PGD----LVERHMIDGDIVLFNRQPSLHRISIMAHRAKILEG-RTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGDTSNLVTPRNGELMIAATQDFLTGGYLLTQKDAFFDRGQICQIITQILCGADQTLPVHLPPPTIIKPQALWTGKQVFSMMLR----PDKDTRVLANLETKGK------------------SYTKDKEFCVNDSYVVIRNSELLAGSMDKSTMGSG--SKANIFYVLLRDFGEKAACKAMWRLARVASWFLMNRGFSIGIGDVTPSA-------SLLKQKKGLVD----SGYE------KCDQYIRQLE-EGTLPCQAGCSEEETLEANILHELSTIRDKAGKSSLTALHKSNAPLTMALCGSKGSFINISQMIACVGQQAISGKRVPNGFEDRSLPHFGRHSKVPAAKGFVANSFYSGLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCMQYDMTVRNSSGEVIQFEYGGDNLD 1515
BLAST of EMLSAG00000006751 vs. C. finmarchicus
Match: gi|592924799|gb|GAXK01033616.1| (TSA: Calanus finmarchicus comp82623_c1_seq1 transcribed RNA sequence) HSP 1 Score: 277.715 bits (709), Expect = 1.168e-78 Identity = 174/509 (34.18%), Postives = 266/509 (52.26%), Query Frame = 0
Query: 509 PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGK--IKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFS-KTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYEL---YGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLD 1011
PG+ V RH+I+GD +L NRQP+LH+ SIM+HRA++L+G + R + VC YNADFDGDEMN H PQ E AR+EA L+G + + P++G + QD + G ++ + FFD+ + Q++ L + PP I KP+ LW+GKQ+ S ++ P +++ L + +TK K S++ K + +S V+ N EL+ G +DK+ G+ S + FY L +G ++ + + +R+ + FL GF++G+ D+ + ++KQ K + D SG + +R+ E Q ++ + + + I L N M G+KGS +N Q+ +GQ + GKR P RSLP F + P A GF+ F +G+ P EFFFH M GREGL+DTAVKT+ +GY+QR L+K LE L + YD+TVR+S G V+QF+YG D+LD
Sbjct: 403 PGD----LVERHMIDGDIVLFNRQPSLHRISIMAHRAKILEG-RTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGDTSNLVTPRNGELMIAATQDFLTGGYLLTQKDAFFDRGQICQIITQILCGADQTLPVHLPPPTIIKPQALWTGKQVFSMMLR----PDKDTRVLANLETKGK------------------SYTKDKEFCVNDSYVVIRNSELLAGSMDKSTMGSG--SKANIFYVLLRDFGEKAACKAMWRLARVASWFLMNRGFSIGIGDVTPSA-------SLLKQKKGLVD----SGYE------KCDQYIRQLE-EGTLPCQAGCSEEETLEANILHELSTIRDKAGKSSLTALHKSNAPLTMALCGSKGSFINISQMIACVGQQAISGKRVPNGFEDRSLPHFGRHSKVPAAKGFVANSFYSGLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCMQYDMTVRNSSGEVIQFEYGGDNLD 1788
BLAST of EMLSAG00000006751 vs. C. finmarchicus
Match: gi|592924793|gb|GAXK01033622.1| (TSA: Calanus finmarchicus comp82623_c1_seq7 transcribed RNA sequence) HSP 1 Score: 163.31 bits (412), Expect = 9.052e-43 Identity = 96/286 (33.57%), Postives = 156/286 (54.55%), Query Frame = 0
Query: 509 PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGK--IKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFS-KTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYEL---YGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDI 788
PG+ V RH+I+GD +L NRQP+LH+ SIM+HRA++L+G + R + VC YNADFDGDEMN H PQ E AR+EA L+G + + P++G + QD + G ++ + FFD+ + Q++ L + PP I KP+ LW+GKQ+ S + + P +++ L + +TK K S++ K + +S V+ N EL+ G +DK+ G+ S + FY L +G ++ + + +R+ + FL GF++G+ D+
Sbjct: 52 PGD----LVERHMIDGDIVLFNRQPSLHRISIMAHRAKILEG-RTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGDTSNLVTPRNGELMIAATQDFLTGGYLLTQKDAFFDRGQICQIITQILCGADQTLPVHLPPPTIIKPQALWTGKQVFSMM----LRPDKDTRVLANLETKGK------------------SYTKDKEFCVNDSYVVIRNSELLAGSMDKSTMGSG--SKANIFYVLLRDFGEKAACKAMWRLARVASWFLMNRGFSIGIGDV 822
BLAST of EMLSAG00000006751 vs. C. finmarchicus
Match: gi|592924795|gb|GAXK01033620.1| (TSA: Calanus finmarchicus comp82623_c1_seq5 transcribed RNA sequence) HSP 1 Score: 166.392 bits (420), Expect = 1.358e-42 Identity = 113/364 (31.04%), Postives = 180/364 (49.45%), Query Frame = 0
Query: 652 PAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFS-KTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYEL---YGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLD 1011
P I KP+ LW+GKQ+ S ++ P +++ L + +TK KS ++ K + +S V+ N EL+ G +DK+ G+ S + FY L +G ++ + + +R+ + FL GF++G+ D+ + ++KQ K + +++ + +R+ E Q ++ + + + I L N M G+KGS +N Q+ +GQ + GKR P RSLP F + P A GF+ F +G+ P EFFFH M GREGL+DTAVKT+ +GY+QR L+K LE L + YD+TVR+S G V+QF+YG D+LD
Sbjct: 130 PTIIKPQALWTGKQVFSMMLR----PDKDTRVLANLETKGKS------------------YTKDKEFCVNDSYVVIRNSELLAGSMDKSTMGSG--SKANIFYVLLRDFGEKAACKAMWRLARVASWFLMNRGFSIGIGDVTPSA-------SLLKQKKGL----------VDSGYEKCDQYIRQLE-EGTLPCQAGCSEEETLEANILHELSTIRDKAGKSSLTALHKSNAPLTMALCGSKGSFINISQMIACVGQQAISGKRVPNGFEDRSLPHFGRHSKVPAAKGFVANSFYSGLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCMQYDMTVRNSSGEVIQFEYGGDNLD 1095
BLAST of EMLSAG00000006751 vs. L. salmonis peptides
Match: EMLSAP00000006751 (pep:novel supercontig:LSalAtl2s:LSalAtl2s378:546363:554008:1 gene:EMLSAG00000006751 transcript:EMLSAT00000006751 description:"maker-LSalAtl2s378-augustus-gene-5.27") HSP 1 Score: 3508 bits (9095), Expect = 0.000e+0 Identity = 1687/1687 (100.00%), Postives = 1687/1687 (100.00%), Query Frame = 0
Query: 1 MGSLKKTRNVVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIYEGEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKLSIKT 1687
MGSLKKTRNVVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIYEGEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKLSIKT
Sbjct: 1 MGSLKKTRNVVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIYEGEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKLSIKT 1687
BLAST of EMLSAG00000006751 vs. L. salmonis peptides
Match: EMLSAP00000000277 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1041:91150:95596:1 gene:EMLSAG00000000277 transcript:EMLSAT00000000277 description:"augustus_masked-LSalAtl2s1041-processed-gene-0.11") HSP 1 Score: 401.364 bits (1030), Expect = 4.407e-116 Identity = 287/857 (33.49%), Postives = 435/857 (50.76%), Query Frame = 0
Query: 396 GFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQ----RKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKG---KIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGA-TMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQL-MVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLD-VCKSQYIVPNQMAFLYDNMKSVINPSTLK-LISEHCMNNSDEL-NELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSEDDDSQNHFKKKYVQVPDPCTSVFRPDSN-FGSVAEKVEDLIQSYLKNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTP 1239
GF Q ++ K G FR ++ GKRV+F++RTVI+PDP + I+++G+P AK L+Y V N+ +R+L+ NGP++HPGA F+E +S RK + +RE +A+ L V RH+++ D +L NRQP+LH+ SIM HRA++L+ + R + VC YNADFDGDEMN H PQ E AR+EA L+G + P++G L QD + ++ + F D+ + Q++ L + KI PPAI KP +LW+GKQI S ++L R L +K K + D ++ C + +S V+ N EL+ G +DK+ G+ T S+ + +G + + SRI + FL GF++G+ D+ +++++++++ N DE + LNA G+L S E+ ++ + L + ++ A L ++N L M G+KGS N Q+ +GQ + GKR P RS P F P A GF++ F +G+ P EFFFH M GREGL+DTAVKT+ +GY+QR L+K LE LV +YD TVR+S V+QF YG D LD + P + D++K++ ST + +E M+ +DEL N+L ++ ++++R NFLI+ + KK +V +F ++ F V + +E L S L +F + KYMK+ ++PG VG L QS+GEP TQMTL TFHFAG MN+TLG+PR++EI+ AS I TP
Sbjct: 341 GFVQRLKGKQGRFRGNLSGKRVDFSSRTVISPDPNLRIEQVGVPIHIAKILTYPERVHRANLGLMRKLIKNGPDIHPGANFVELKSKDGTTIRKYLKYG---KRERIAQDLKIGD---------LVERHMMDDDIVLFNRQPSLHRISIMCHRAKILE-HRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGNKSNLVTPRNGELLIAATQDFITGAYLLTSKETFLDRGKVCQIISQILASSPDDDIKIDIPPPAIMKPVQLWTGKQIFS-LLLRPNKQVRTKANLSAKGKTYTKD-------------------EEFC-VNDSWVLIRNSELLAGAMDKSTVGSGTKSSIFYILLRDWGQDIACTAMWRLSRIASWFLMNRGFSIGIGDVTPSKSLLDSKKDLVEKGYNRCDEYISQ---LNA--GTLQSTAGNSEEET---------LESLILKELSAIRDKAGKASL-----TALHKSNAPLTMALCGSKGSFXNISQMIACVGQQAISGKRIPDGFEDRSXPHFGRKSKIPAAKGFVENSFYSGLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLVQHYDNTVRNSSNEVIQFVYGGDGLDPMMMEGKDRPVDFQRVLDHIKAISPYSTEDPMDAETLMSATDELINDLIGPSQEFKEELR-------------------------------------NFLIE-----------YSKKVAKV----WKLFNLNAGKFRPVEKHIERLTLSQLV--------EFVEKCKEKYMKAAIEPGTAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIIN-ASKKISTP 1083 HSP 2 Score: 73.1738 bits (178), Expect = 5.575e-13 Identity = 43/117 (36.75%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 1567 NSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIEN-NPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQK 1682
N+ ++A GIEAA TI +EI +++G++I+ RH+TL+AD MT G R G+ S L +FE L A G+KD ++ S CII+G P GT K++ K
Sbjct: 1227 NNTCEVALTLGIEAARSTIMNEIQYTMQSHGMSIDRRHITLLADLMTCRGEVLGITRHGLAKMKESVLMLASFEKXSDHLFDAAYHGQKDAIRGVSECIIMGIPMPVGTGLMKLLYK 1343 HSP 3 Score: 68.5514 bits (166), Expect = 1.366e-11 Identity = 40/125 (32.00%), Postives = 66/125 (52.80%), Query Frame = 0
Query: 18 LSFGMFSSEEIRNLSAMEITNPNSFNQLGH--PVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQ 140
+ FGM SSEE+ + + N +NQ PV G+ D RMG S + +C+TC C GHFG+I+L LPV + F++ ++ +++ C SC ++ FL + + DLG + + +
Sbjct: 17 VCFGMQSSEEMEQCATIHTVAKNLYNQDSSRTPVSYGVLDYRMGT-SQQDKNCTTCGKGLPDCIGHFGYIDLELPVYHVGFFRSIIQVLQSICKSCCRILLKPKSANSFLKKIRSKDLGYLTKKK 140
BLAST of EMLSAG00000006751 vs. L. salmonis peptides
Match: EMLSAP00000008901 (pep:novel supercontig:LSalAtl2s:LSalAtl2s554:55021:61089:-1 gene:EMLSAG00000008901 transcript:EMLSAT00000008901 description:"maker-LSalAtl2s554-augustus-gene-0.27") HSP 1 Score: 336.265 bits (861), Expect = 1.334e-93 Identity = 225/671 (33.53%), Postives = 344/671 (51.27%), Query Frame = 0
Query: 345 DLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQK--NSSGWGFKQLIER---KTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSL 1010
D+ E++R + ++ ++LQ V D +M K SG K + R K G R ++MGKRV+F+ARTVITPDP + ID++G+P A+ L++ VTP+N+++++ELV G + +PGA +I ++G+R I K SSD V RH+ +GD ++ NRQP+LHK S+M H+ +VL R++ + YNADFDGDEMN H PQ+ R+E N+ Q + P+ P+ G++QD + A KM+ R F + E LV L GK+ PAI KPK LW+GKQ+I+ II PG + T D P W S ++ V+ +GELV G++ K G SL+H G + + N+L EG ++G+ D + + ++I+ ++ DE + V A+ L + R++++ R+ D +++ G R + +F NN ++MV AG+KGS +N Q+ +GQ +EGKR P R+LP F+ D P + GF++ ++ G+ P EF+FH M GREGLIDTAVKT+ +GY+QR LIK +E ++V YD TVR++ G ++Q YGED L
Sbjct: 305 DIIKANNELIRNEQAGAAAHIISENIRMLQFHVATFTDNDMPGLPKAMQKSGRPLKAVKARLKGKEGRIRGNLMGKRVDFSARTVITPDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIIRDTGER--------IDLRYHPK-----SSDLHLQCGYKVERHIRDGDLVVFNRQPSLHKMSMMGHKVKVLPWS-TFRMNLSDTSPYNADFDGDEMNLHVPQSMETRAEILNIHLTPRQIITPQAXKPVMGIVQDTLTAVRKMTKRDVFLSKEEMMTLVM-FLPTWDGKLPI--PAIIKPKPLWTGKQLITLII-----PGNTNCMRLHATH---PDEETNGPYHW-------------ISPGDTRVLIEHGELVMGILCKKSLGTAAGSLLHVSQLENGHEINGRFYGNIQTVVNNWLLLEGHSIGIGDTIADP---QTYQDIINTIRKAKDEV--TEVIQKAHSDELEATPGNTLRQTFENKVNRILNDA--RDKTGGSAKRS---------LTEF--NNFKVMVVAGSKGSDINVSQVIACVGQQNVEGKRIPFGFIKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVCYDGTVRNAVGQLIQLIYGEDGL 919 HSP 2 Score: 80.8777 bits (198), Expect = 2.981e-15 Identity = 43/89 (48.31%), Postives = 57/89 (64.04%), Query Frame = 0
Query: 1175 AKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNR 1263
+K+ + PGE VG +A QS+GEP+TQMTLNTFHFAG NVTLG+PRL+EI+ + S K PS + FL + +K + L R
Sbjct: 1097 SKFFYAQSTPGEMVGAMAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINI-SKKPKAPSLTV-FLTGSAARDAEKAKNVLCR 1183 HSP 3 Score: 71.633 bits (174), Expect = 1.694e-12 Identity = 47/143 (32.87%), Postives = 70/143 (48.95%), Query Frame = 0
Query: 1539 ETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGI-ENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIM 1680
E + TDG + + D+ I R N I ++ GIEA +++ EI VF YGI +N+RHL L+ D MT G R GI + L + +FE + L A + D ++ S IILG+ GT+SF ++
Sbjct: 1356 EWLLETDGTALMRVLSERDVDSI-RTTSNDICEIFSALGIEAVRKSVEKEIFTVFNFYGIYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHAEVDPMKGISENIILGQLPRMGTASFDLL 1497
BLAST of EMLSAG00000006751 vs. SwissProt
Match: gi|56405300|sp|O35134.2|RPA1_MOUSE (RecName: Full=DNA-directed RNA polymerase I subunit RPA1; Short=RNA polymerase I subunit A1; AltName: Full=DNA-directed RNA polymerase I largest subunit; AltName: Full=DNA-directed RNA polymerase I subunit A; AltName: Full=RNA polymerase I 194 kDa subunit; Short=RPA194) HSP 1 Score: 1263.44 bits (3268), Expect = 0.000e+0 Identity = 720/1738 (41.43%), Postives = 1032/1738 (59.38%), Query Frame = 0
Query: 17 ALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLK-KKCGECGG--------YTKKISLYQSRFIYEGEDEDASK-----------------NKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCS-DMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESS------------EDLSSEA--QEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSD-PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSL--NANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDIN-KIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAE----KVEDLIQSYLKN-----NKSDKG-EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTP-SSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCR--IIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDEN-------KSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDEN----EETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
+SFGM+S+EE++ LS ITNP + LG+P GLYDL +GP +D C+TC+ F+ C GH GHI+LPL V NP + +L L+R SC+SCH L L + Q ++L++G + + ++ + EE+ + E +E L ++ +L +N S +NV R + F+ + K+C C + K+ + +++ D++ ++ + L P Q HL W + L +++ L D + +FFL+ + PP + RP G M + Q +LQ +++ ++++++ + +E E+ SS A + L + G ++ KL +W LQ+ V+ + D EM+ G +Q++E+K GLFR HMMGKRV++AAR+VI PD YIN +EIG+P VFA KL+Y PVTPWNV+ELR+ VINGPNVHPGA + E G R + D QREA+AK LLTP++ P K V RH+ NGD +LLNRQPTLH+PSI +HRAR+L EKV+RLHYA CK+YNADFDGDEMNAHFPQ+E+ R+EA L +QYLVPKDG PL GLIQDH+++G M+IRG FF + +Y +LVY L + G++K PPAI KP LW+GKQ++ST+++N IP + L K KI S W+ + PRP S MCES+VI GEL+CGV+DK YG++ Y LVH YE+YGG +S +L+ +R+FT +L GFTLGV DILV+ +A+ R+ I+++ G + + +SL A+ + + + H K + +D +KE + +N IN AC+P GL ++FPENNLQ+MVQ+GAKGSTVNTMQISCLLGQIELEG+RPP+M SG+SLP F PY+ PRAGGF+ GRF+TGI+P EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLV+ YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q FL N + ++ L + + L +K+ I+K K G R GAFL FS+ ++++ +N K + GRS T +++ W + D++S+ ++K+ PDP SV+RPD F SV+E K++D Q + KS+ ++ R ++ K+ +S+ DPGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS+NIKTP SV F + L+ +L R L +VL+ V + E + G R + + ++R QFLP Y+ + + P IL ++E FF K+L+ I +K S+ + +++D + DS Q++++ + EE D E + DADA++ K+ +Q ++ E + E + + +++ N + E DE E+E QK P +E KRR + + SF I +Y D ++ LW ++T+ P+ + D S+L+ + A K ++Y K I + L + N +E + T+GIN+ +F++ ++LD+ RL N IH MA YGIEAA R I EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI+++ SPLQQMTFET+ FL+ AT+ G D L+SPS+C+++GK GGT F++ Q L
Sbjct: 14 GISFGMYSAEELKKLSVKSITNPRYVDYLGNPSANGLYDLALGP-ADSKEVCATCVQDFNNCSGHLGHIDLPLTVYNPFLFDKLYLLLRGSCLSCHMLTCPRAAIYLLISQLRVLEVGALQAVYELERIL----SRFLEETGDPSAFEIQEE-----LEEYTSKILQNNLLGSQGTHVKNVCESRSKLVAQFWKTHMAAKQCPHCKTGRSVVRKEHNSKLIITYPATVHKKSDQEGTELPEGVPEAPGIDKAQMGKRGYLTPSSAQEHLFAIWKNEGFFLNYLFSGLDDIGPESSFNPSMFFLDFIVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDAVLIRKLLALMAQEQKLPCEMTELTIDKENDSSVAIDRSFLGLLPGPSLTDKLYNIWIRLQSHVNIVFDSEMDKLMLEKYP-GIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSSVDAAQREAVAKQLLTPATGAPKPQGTKVVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELVYRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDYAPLNLSGKAKIGSKAWVKEKPRPIPDFDPDS--------MCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPNADVVRQRIIEESTQCGPQAVKAALSLPETASCDEIQGKWQDAHLS--KDQRDFNMIDMKFKEEVNHYSNEINKACMPLGLHRQFPENNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVIQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLAGNYEVIMKSKHLHEVLSRA-DPQKVLGHIKA-IKKWHHKHSGALLRKGAFLSFSQ-KIQAAVKALNLKGSIQNGRSPETQQMLQMWYDLDEESRWKYQKRAAPCPDPSLSVWRPDIYFASVSETFEKKIDDFSQEWAAQAERSYKKSELSLDRLRTLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVFDTKKALKKVKSLKKRLTRVCLGEVLQKVDIQESFCM-GEKRNKFQVYELRFQFLPHAYYQQEKCLRPEDILHFMETRFF-KLLMEAIKKK-KNKASAFRNVNSRRATQKDLNDTE-DSGRSQREEERDEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEGEEEEEEEVQEEGNIKGDGVHQGHEPDEEEHLGLEEEESSQKP--PRRHSRPQGAEAIKRRIQ----AVRESYSF-IEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHKAIVYTTKGITRCLLNETTNSKNEKELVLNTEGINLPELFKYSEILDLRRLYSNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1716
BLAST of EMLSAG00000006751 vs. SwissProt
Match: gi|3914802|sp|O54889.1|RPA1_RAT (RecName: Full=DNA-directed RNA polymerase I subunit RPA1; Short=RNA polymerase I subunit A1; AltName: Full=DNA-directed RNA polymerase I largest subunit; AltName: Full=DNA-directed RNA polymerase I subunit A; AltName: Full=RNA polymerase I 194 kDa subunit; Short=A194; Short=RPA194) HSP 1 Score: 1254.58 bits (3245), Expect = 0.000e+0 Identity = 713/1740 (40.98%), Postives = 1030/1740 (59.20%), Query Frame = 0
Query: 17 ALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLK-KKCGECGG--------YTKKISLYQSRFIYE-----------------GEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCS-DMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESS------------EDLSSEA--QEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSD-PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMK-VDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKS--KIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKT--GRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLK---------NNKSDKG-EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIK-----LNRCALSDVLESVHVTEKISLF-GSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDEN----KSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDEN----EETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
+SFGM+S+EE++ LS ITNP + LG+P GLYDL +GP +D CSTC+ F+ C GH GHI+LPL V NPL + +L L+R SC++CH L L + Q K+LD+G + + ++ + EE+ + E +E L ++ +L +N S +NV R + F+ + K+C C + K+++ +++ G DE + L P Q HL W + L +++ L D + +FFL+ + PP + RP G M + Q +LQ +++ ++++++ + +E E+ SS A + L + G ++ KL +W LQ+ V+ + D +M+ G +Q++E+K GLFR HMMGKRV++AAR+VI PD YIN +EIG+P VFA KL+Y PVTPWNV+ELR+ VINGPNVHPGA + E G R + D QREA+AK LLTPS+ P K V RH+ NGD +LLNRQPTLH+PSI +HRA +L EKV+RLHYA CK+YNADFDGDEMNAHFPQ+E+ R+EA L +QYLVPKDG PL GLIQDH+++G M+IRG FF + +Y +LVY L + G++K PPAI KP LW+GKQ++ST+++N IP + L K KI S W+ + PRP S MCES+VI GEL+CGV+DK YG++ Y LVH YE+YGG +S +L+ +R+FT +L GFTLGV DILV+ +A+ R+ I+++ G + ++L S + ++ ++ Q+ +D +KE + +N IN AC+P GL ++FPENNLQ+MVQ+GAKGSTVNTMQISCLLGQIELEG+RPP+M SG+SLP F PY+ PRAGGF+ GRF+TGI+P EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLV+ YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q FL N + ++ L + ++ +D L+ I+K + R GAFL FS+ ++++ +N ++ KT GRS T +++ W E D+ S+ ++K+ PDP SV+RPD +F SV+E E I Y + +N+S+ ++ R ++ K+ +S+ DPGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS+NIKTP + V ++K R+K L R L +VL+ V + E + ++ R+ ++R QFLP Y+ + + P IL ++E FF K+L+ I K + ++ + ++DD + DS +++++ + EE D E + DADA++ K+ +Q ++ E + E + D +++EN + + E ++ + P +E +RR + + SF I +Y D ++ LW ++T+ P+ + D S+L+ + A ++Y K I + L + N +E + T+GIN+ +F++ ++LD+ RL N IH +A YGIEAA R I EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI+++ SPLQQMTFET+ FL+ AT+ G D L+SPS+C+++GK GGT F++ Q L
Sbjct: 14 GISFGMYSAEELKKLSVKSITNPRYVDSLGNPSADGLYDLALGP-ADSKEVCSTCVQDFNNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAAIHLLVCQLKVLDVGALQAVYELERIL----SRFLEETSDPSAFEIQEE-----LEEYTSKILQNNLLGSQGAHVKNVCESRSKLVAHFWKTHMAAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHKKSGQKDAELPEGAPAAPGIDEAQMGKRGYLTPSSAQEHLFAIWKNEGFFLNYLFSGLDDIGPESSFNPSMFFLDFIVVPPSRYRPINRLGDQMFTNGQTVNLQAVMKDAVLIRKLLAVMAQEQKLPCEMTEITIDKENDSSGAIDRSFLSLLPGQSLTDKLYNIWIRLQSHVNIVFDSDMDKLMLEKYP-GIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDATQREAVAKQLLTPSTGIPKPQGAKVVCRHVKNGDILLLNRQPTLHRPSIQAHRAHILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELVYRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDYTPLNLTGKAKIGSKAWVKEKPRPVPDFDPDS--------MCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPNADVMRQRIIEESTQCGPRAVRAALNL-PEAASCDEIQGKWQDAIWRKDQRDFNMIDMKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVIQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEV----LSRADPQKVLRHFRAIKKWHHRHSSALLRKGAFLSFSQ-KIQAAVKALN-LEGKTQNGRSPETQQMLQMWHELDEQSRRKYQKRAAPCPDPSLSVWRPDIHFASVSETFEKKIDDYSQEWAAQAEKSHNRSELSLDRLRTLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSV----PVFNTKKALRRVKSLKKQLTRVCLGEVLQKVDIQESFCMGEKQNKFRVYELRFQFLPHAYYQQEKCLRPEDILHFMETRFF-KLLMEAIKKK-NSKASAFRSVNTRRATQKDLDDTE-DSGRNRREEERDEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEGEEEEEEDVQEEENIKGEGAHQTHEPDEEEGSGLEEESSQNPPCRHSRPQGAEAMERRIQ----AVRESHSF-IEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHNAIVYTTKGITRCLLNETINSKNEKEFVLNTEGINLPELFKYSEVLDLRRLYSNDIHAVANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1715
BLAST of EMLSAG00000006751 vs. SwissProt
Match: gi|215273873|sp|O95602.2|RPA1_HUMAN (RecName: Full=DNA-directed RNA polymerase I subunit RPA1; Short=RNA polymerase I subunit A1; AltName: Full=A190; AltName: Full=DNA-directed RNA polymerase I largest subunit; AltName: Full=DNA-directed RNA polymerase I subunit A; AltName: Full=RNA polymerase I 194 kDa subunit; Short=RPA194) HSP 1 Score: 1253.43 bits (3242), Expect = 0.000e+0 Identity = 717/1748 (41.02%), Postives = 1036/1748 (59.27%), Query Frame = 0
Query: 7 TRNVVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLV-------PTPGTSLDEESMSRTGSEYNDEVIVQKLMD----HLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIYE----------GEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYP-MLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIV------QNINEESSEDLSSEAQE--------MLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSD-PGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHT-EGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKR--MKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAE----KVEDLIQSYLKNNKS--DKGE----QFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIK-----LNRCALSDVLESVHVTEKISL-FGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQ----MDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDD--IPII----SRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYL---TKDENE-ETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
++N+ +SFGM+S+EE++ LS ITNP + LG+P GLYDL +GP +D CSTC+ F C GH GHIELPL V NPL + +L L+R SC++CH L L L Q ++L++G + + ++ P P S E + +Y E++ L+ H++NV +S K ++ A R K +V K+ + K+++ ++ G +E + L P + HL W + L +++ M D + +FFL+ + PP + RP G M + Q +LQ +++ V ++++++ Q + EE + + E ++ L T+ G ++ KL +W LQ+ V+ + D EM+ + G +Q++E+K GLFR HMMGKRV++AAR+VI PD YIN +EIG+P VFA KL+Y PVTPWNV+ELR+ VINGPNVHPGA + E G R + D QREA+AK LLTP++ P K V RH+ NGD +LLNRQPTLH+PSI +HRAR+L EKV+RLHYA CK+YNADFDGDEMNAHFPQ+E+ R+EA L +QYLVPKDG PL GLIQDH+++G M+ RG FF + Y +LVY L + G++K L P+I KP LW+GKQ++ST+++N IP + L K KI W+ + PR S SMCES+VI GEL+CGV+DK YG++ Y LVH YE+YGG +S ++L+ +R+FT +L GFTLGV DILV+ A+ R+ I+++ + G + + +LN + E+R ++++ +R +D +KE + +N IN AC+P GL ++FPEN+LQ+MVQ+GAKGSTVNTMQISCLLGQIELEG+RPP+M SG+SLP F PY+ PRAGGF+ GRF+TGIKP EFFFHCMAGREGL+DTAVKTSRSGYLQRC+IK LEGLVV YDLTVRDSDGSVVQF YGED LD+ K+Q++ P Q FL N + ++ L + + L+ ++ I+K + K R GAFL +S+ E+ + + + GRS T +++ W E D++S+ ++KK PDP SV+RPD F SV+E KV+D Q + + +K E + R ++ K+ +S+ +PGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS+NIKTP + VL ++K R+K L R L +VL+ + V E + ++ ++ ++R QFLP Y+ + + P IL ++E FF K+L+ I +K ++ + ++D+ + +++ + E H D E + DADA++ K+ +Q + +E + E D +++ N E +Q+ +E+ LG ++D +P + + + E Q + + ++ I +Y D ++ LW ++T+ P+ + D S+L+ + A VIY K I + L T ++NE E + T+GIN+ +F++ ++LD+ RL N IH +A YGIEAA R I EI +VF YGI ++ RHL+L+ADYM F+G YKP NR GI +N SPLQQMTFET+ FL+ AT+ G D L+SPS+C+++GK GGT F++ Q L
Sbjct: 4 SKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGP-ADSKEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLLLCQLRVLEVGALQAVYELERILNRFLEENPDPSASEIREELE----QYTTEIVQNNLLGSQGAHVKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKE-------HNSKLTITFPAMVHRTAGQKDSEPLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRFNPSVFFLDFLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPEEVATPTTDEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMMDKYP-GIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREHYMELVYRGLTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKITGKAWVKETPR--------SVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTCLARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPQAVRA--ALNLPEAASYDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRA-DPKKALHHFRA-IKKWQSKHPNTLLRRGAFLSYSQKIQEAVKALKLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAAACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSV----PVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFMETRFF-KLLMESIKKK-NNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHI-VDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVREIHPFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 1719
BLAST of EMLSAG00000006751 vs. SwissProt
Match: gi|56405368|sp|P91875.2|RPA1_DROME (RecName: Full=DNA-directed RNA polymerase I subunit RPA1; Short=RNA polymerase I subunit A1; AltName: Full=DNA-directed RNA polymerase I largest subunit; AltName: Full=DNA-directed RNA polymerase I subunit A) HSP 1 Score: 1176 bits (3041), Expect = 0.000e+0 Identity = 640/1347 (47.51%), Postives = 871/1347 (64.66%), Query Frame = 0
Query: 11 VHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIYE----------GEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLK-DCSDMEH----PTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESY-KAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMA-FLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRD-----GAFLRFSRD-NSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDAT 1333
VH L F +F+ +EIR LS +++ +F+ LGH + GGLYD+RMG Y C TCL + CPGH GHIEL PV NP F K + L+ C+ C+KL + + ++Q +L+D G I+E+Q+ L + + E++ + +V + + +L+ N+K S ++ST+ +LR T I L KKC C + + R ++ G + + +E +R+LR+ + +LK + P+L +D+ P D+FF++ + PP++RP G ++ +PQ ++E ++ +++ + + E L+ EA+ +T++G+T KL W LQ VD LLD +N S++ SG G KQ+IE+K+GL R HMMGKRVN+AARTVITPDP IN+DEIG+P++FAKKLSY VPVT WNV ELR++V+NGP+VHPGA +I+ ++G I ++ +RE+LAK LL S+P +D +K V+RH++NGD +LLNRQP+LHKPSIM H+AR+L GEK RLHY+ CK+YNADFDGDEMNAH+PQ+EVAR+EA NLV V+ YLVPKDGTPL GLIQDHVI+GVK+SIRGRFF++ +YQQLV+ L +K IK LPP I KP LWSGKQI+STII+N IP G E + L S KI +W PRP G++ +G + ES+V NGEL+ GV+DK QYGAT Y L+H YELYGG S+ LL+AF+++FT FL EGFTLGV DILV A+ R +I+++ +N+G+ + + L + EL +Y K + R+ +D+ YK L TN INS CLPRGLI KFP NNLQLMV +GAKGS VNTMQISCLLGQIELEGKRPP+MISG+SLPSF ++T P++GGFIDGRFMTGI+PQ+FFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGL V+YDLTVRDSD SVVQF YGED LD+ KS++ A FL N +++ P+ L+L M + ++L +K+++ K +R + + AF FS + E + N+I+ KTGR L+K W + D + + ++KKY + PDP +V++ D +GSV+E+ LI Y K + K E DIM K +KS+ PGEPVG++A QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILM+ASSNIKTPS I P + + +KLRI LN L+++LE VHV+ ++L R +R QFLPR+ YK D+ V P I+ Y+ + FF +++ ++ +
Sbjct: 9 VHMFPSDLEFAVFTDQEIRKLSVVKVITGITFDALGHAIPGGLYDIRMGSYGRCMDPCGTCL-KLQDCPGHMGHIELGTPVYNPFFIKFVQRLLCIFCLHCYKLQMKDHECEIIMLQLRLIDAGYIIEAQELE-LFKSEIVCQNTENLVAI----KNGDMVHPHIAAMYKLLEKNEKNS-SNSTKTSCSLR-TAITHSALQRLGKKCRHCNKSMRFVRYMHRRLVFYVTLADIKERVGTGAETGGQNKVIFADECRRYLRQIYANYPELLKLLVPVLGLSNTDLTQGDRSPVDLFFMDTLPVTPPRARPLNMVGDMLKGNPQTDIYINIIENNHVLNVVLKYM-KGGQEKLTEEAKAAYQTLKGETAHEKLYTAWLALQMSVDVLLD--VNMSREMKSGEGLKQIIEKKSGLIRSHMMGKRVNYAARTVITPDPNINVDEIGIPDIFAKKLSYPVPVTEWNVTELRKMVMNGPDVHPGANYIQDKNGFTTYIPADNASKRESLAKLLL---SNP-KDGIKIVHRHVLNGDVLLLNRQPSLHKPSIMGHKARILHGEKTFRLHYSNCKAYNADFDGDEMNAHYPQSEVARAEAYNLVNVASNYLVPKDGTPLGGLIQDHVISGVKLSIRGRFFNREDYQQLVFQGLSQLKKDIKLLPPTILKPAVLWSGKQILSTIIINIIPEGYERINLDSFAKIAGKNWNVSRPRP---PICGTNP--EGNDLSESQVQIRNGELLVGVLDKQQYGATTYGLIHCMYELYGGDVSTLLLTAFTKVFTFFLQLEGFTLGVKDILVTDVADRKRRKIIRECRNVGNSAVAAALELEDE--PPHDELVEKMEAAYVKDSKFRVLLDRKYKSLLDGYTNDINSTCLPRGLITKFPSNNLQLMVLSGAKGSMVNTMQISCLLGQIELEGKRPPLMISGKSLPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLSVHYDLTVRDSDNSVVQFLYGEDGLDILKSKFFNDKFCADFLTQNATAILRPAQLQL-----MKDEEQL----AKVQRHEKHIRSWEKKKPAKLRAAFTHFSEELREEVEVKRPNEINSKTGRRRFDEGLLKLWKKADAEDKALYRKKYARCPDPTVAVYKQDLYYGSVSERTRKLITDYAKRKPALK-ETIADIMRVKTIKSLAAPGEPVGLIAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMLASSNIKTPSMDIPIKPGQ-QHQAEKLRINLNSVTLANLLEYVHVSTGLTL-DPERSYEYDMRFQFLPREVYKEDYGVRPKHIIKYMHQTFFKQLIRAILKVS 1321
BLAST of EMLSAG00000006751 vs. SwissProt
Match: gi|3334489|sp|P15398.2|RPA1_SCHPO (RecName: Full=DNA-directed RNA polymerase I subunit rpa1; AltName: Full=DNA-directed RNA polymerase I 190 kDa polypeptide; AltName: Full=DNA-directed RNA polymerase I largest subunit) HSP 1 Score: 1069.69 bits (2765), Expect = 0.000e+0 Identity = 665/1821 (36.52%), Postives = 982/1821 (53.93%), Query Frame = 0
Query: 11 VHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTP-------GTSLDEESMSR--------------TGSEYNDEVIVQKLMDHLQNV-LDSNKKPSVTHSTRNVEALRKTCIKDFFN-VSLKKKCGECG---------GYTKKISLYQS----RFI-----------------------YEG-----------------EDEDASKNKTE---------LNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASL-QILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNAS---QKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKF---------VYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSAL----INVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATS--GVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNK----SDKGE-----------QFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGS-SRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKK---------LVVETGTS------------KSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKM-------NRQMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETT---ITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIM 1680
V +E ++ FG++ +++ +S +I NP + L HP GGLYDL +GPY + C+TC L +CPGHFGHI LP+P +PLF+ ++ L+R +C+ CH S VK LF + KLLD GL+ ES+ ++ T GT L++ S S T DE + + + D QN +D+ + H RK ++ F++ +S +K+C C G+ K + S +F+ Y+G ED + KNK++ + E++ HLR ++K++ +L +Y + D+FFL +A PP + RP G + + Q L +IL ++ I +++++S+ +++ + +E L R + +N + LQ+ V+ L+D N S Q + G KQ++E+K GLFR HMMGKRVN+AAR+VI+PDP I +EIG+P VFA KL+Y PVT +N E+R VINGP+ PGA I+ E G + QR ALA LLTP S+ + VYRH+ NGD ++LNRQPTLHKPS+M+H+AR+L GEK +R+HYA C SYNADFDGDEMN HFPQ+ ARSEAQ + QYLVP G PL+GLIQDHV+ GV ++ + F+ + EYQQL++ AL + G+IK LPPAI +P W+GKQIIS+++LN P R + L SK K+ W + E V+F +GEL+CG++DK+ +GA+ + LVH+ +ELYG + LLS SR+FT + GFT + D+ + + R ++++ K+ G E A+ G+S ++ + LN+ L E Y+ +K +D K ++ +T+ I + C+P GL+ KFP N++Q M +GAKGS VN QISCLLGQ ELEG+R P+M+SG+SLPSF+PY+T ++GGFI RF+TGI PQE++FHCMAGREGLIDTAVKTSRSGYLQRCL+K LEGL V YD TVRDSDGS+VQF YGEDSLDV K +++ Q F N KS+I ++ KV+ + ++ +D +T S+ L K + KY DP + P GSV+EK + + Y + N + K E +F+ +M +Y +S+VDPGE VGVLA QS+GEPSTQMTLNTFHFAG G NVTLGIPRLREI+M AS+NI+TP+ + V + ++N+ LS+V+ V VTEKIS GS + + IRL R Y++++ V I S F K+L +I + L K V E G + + ++ ++D+D D+++++ + +++HAS E PD+AD ++++ + MD++ DEG F+ DE+ SD + E +LL +++ + SIS + +T + L+ K F +Y E W+ + L FP++ +KL +L++ A + VI+EI I + + ++ T + T+G+N++A+++F + + +N + N I + R YG+EAA I E+ +VF YGI ++ RHL+LIADYMTF+G YK FNR+GIE N SP +M+FET FL A ++G D+L +PSS +++G+ GT SF I
Sbjct: 7 VSSEIKSVKFGIYDVDDVEKISVKQIVNPVLLDNLNHPTNGGLYDLALGPYLKNSV-CATCHLDERYCPGHFGHIVLPIPAYHPLFFSQMYNLLRSTCLYCHHFKLSKVKVHLFFCRLKLLDYGLLNESEMVENVSLTEAIIKNSNGTPLEDGSDSEDSGLGHDDIAKDAATLMRIRDEFVAKSIADSRQNAHIDAQLTTLLLHE-------RKKVVRAFYHAISSRKQCDNCQSFSPNFRKEGFAKIFEIPLSGKNLQFMEQTGKIRSDVLRDTSKKHHEDEGYDGDSDSSNESEVEGIDLFEEDPNPLKNKSKSPIAHGAKYMTSTEVRNHLRRLFVKENVVLSRLYAHKRG---KPASADMFFLQNIAVPPTRFRPASKMGDEVHENIQNELLTRILQSSIQIA-----SLSKDSTVEVNPDEKEGLER-RSRAFELLIN-AFVQLQHDVNSLIDSNRNPSSGGQSRTVPPGIKQILEKKEGLFRKHMMGKRVNYAARSVISPDPNIETNEIGVPPVFATKLTYPEPVTLYNFNEMRNAVINGPHKWPGASHIQNEDGTLISLMPLTIEQRTALANQLLTPQSNLISSPYSYSRLINTNKKVYRHVRNGDMLILNRQPTLHKPSMMAHKARILPGEKTIRMHYANCNSYNADFDGDEMNMHFPQSTNARSEAQFIANTDSQYLVPTSGDPLRGLIQDHVVMGVWLTCKDTFYTRDEYQQLLFQALKPDETGMYGRIKTLPPAIQRPGIYWTGKQIISSVLLNLKPSDRPGLNLKSKAKVPGKYWSPDSE--------------------EGSVLFDDGELLCGILDKSSFGASAFGLVHSVHELYGPDIAGRLLSVLSRLFTAYAQMRGFTCRMDDLRLDEQGDNWRRQLLENGKSFGLEAASEYVGLSTDSPIALLNANLE----EVYRDDEKLQGLDAAMKGKMNGLTSSIINKCIPDGLLTKFPYNHMQTMTVSGAKGSNVNVSQISCLLGQQELEGRRVPLMVSGKSLPSFVPYETSAKSGGFIASRFLTGIAPQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLMKHLEGLCVQYDHTVRDSDGSIVQFHYGEDSLDVTKQKHLT--QFEFSAKNYKSLI----------------------------QKYKVKSV---------------------LSAVDSETASSYAKKALKKPY------------KY----DPVLDKYPPSRYLGSVSEKFQRAVDEYTQKNPDKLIASKKESKLDDSLLNESKFKALMQLRYQQSLVDPGESVGVLASQSIGEPSTQMTLNTFHFAGFGAKNVTLGIPRLREIIMTASANIQTPTMTLRLNDGVSDKRASAFCKEVNKLVLSEVVRQVRVTEKISGQGSDEQSKTYAIRLDLYSRDEYQDEYGVLQEEIESTFSNRFL-KILNRIIKSYLAKSKQRKSGGKDDTVPEVGQALKPLEDIDEAPIEGRAQEALEDEDNDATNEKMVSR---SKQHASY---EGPDEADKVALRQLKGSNKVEDVNMDEEEDEG-----------FKSDESVSD--------FKERKLLEKQNTV-----SISERRELQLKTAKEILSNCKHLDF---DYVNGE----WATVELVFPINTEKLLMVSLVEKACSETVIHEIPGITRCFSKPPDSALDTVPKVITEGVNLKAIWEFYNEISMNDIYTNDIAAILRIYGVEAARNAIVHEVSSVFGVYGIAVDPRHLSLIADYMTFEGGYKAFNRMGIEYNTSPFAKMSFETTCHFLTEAALRGDVDDLSNPSSRLVVGRVGNFGTGSFDIF 1680
BLAST of EMLSAG00000006751 vs. SwissProt
Match: gi|2507346|sp|P10964.2|RPA1_YEAST (RecName: Full=DNA-directed RNA polymerase I subunit RPA190; AltName: Full=DNA-directed RNA polymerase I 190 kDa polypeptide; Short=A190; AltName: Full=DNA-directed RNA polymerase I largest subunit) HSP 1 Score: 1026.54 bits (2653), Expect = 0.000e+0 Identity = 627/1782 (35.19%), Postives = 961/1782 (53.93%), Query Frame = 0
Query: 11 VHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHL-VPTPGTSL---------DEESMSRTGSEYNDEVIVQKLMDHLQN------------VLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKK-KCGECG---------GYTK--KISLYQSR--------FI-------------YEGEDEDASKNKTE-----LNPE-------------ELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGW----GFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKM-KFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALI-----NVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVI---NPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSEDDDSQNHFKK--KYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNN----KSDKG---EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKI---SLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNI---------DDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFH--ILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
V +E ++ FG+ +++EIRNLSA +ITNP + LGHPV GGLYDL +G + CSTC L FCPGH GHIELP+P NPLF+ +L +R SC+ CH V+ + + +LL GLI ES + + + + +S+ +E+ M GS+ + + I L++ L++ L + T V RK + +F L + KC CG G+TK + +L + + FI +G +E AS N E NP E++ L + K+ +L++++ + S D FF++V+ PP + R G + + Q L ++ T +++ + ++++ + +S E + ++ + +L + +QN V+ +D +Q +SG G KQ +E+K GLFR HMMGKRVN+AAR+VI+PDP I +EIG+P VFA KL+Y PVT +N+ ELR+ VINGP+ PGA I+ E G + G QR+ALA LLTPSS+ + K VYRH+ N D +L+NRQPTLHK S+M H+ RVL EK +RLHYA +YNADFDGDEMN HFPQNE AR+EA NL QYL P G+P++GLIQDH+ AGV ++ + FF + +YQQ +Y + + KI LPP IFKP LW+GKQII+T++LN PP + L SK KIK+ W G E+EV+F +G L+CG++DK+QYGA+ Y +VH+ +E+YG ++++LS R+FTN++ FT G+ D+ + ++ N+ R +I+K + G E A +L+ + + + EL + +E + K +D ++ +T+++ S C+P G +KKFP N++Q M +GAKGS VN QI CLLGQ LEG+R P+M+SG++LPSF PY+T AGG++ GRF +GIKPQE++FHCMAGREGLIDTAVKTSRSGYLQRCL K LEG+ V+YD ++RD+DG++VQF YG D++D+ K ++ Q F DN +++ NPS L EH +++S ++ +K + K+ + + H+K+ KY DP + + P GSV+E +D ++S+L N KS G ++FR +M KYM+S+++PGE VG++A QSVGEPSTQMTLNTFHFAG G NVTLGIPRLREI+M AS+ IKTP + V + + D +++ LS+V++ V VTE + G + R I ++F Y ++ V+ + + + F LL+ +V E K + +I D + S+ K+ ++ + + H + + D+ D E++ M +EG+ ++ + ++D + +++ ++S I+ + + ++VQ+ R S S H I +Y D++ W E L D +KL N+++ K +I +I +I++ + EN + + T+G+N +AM+ + +D++ + N + + + YG+EAA TI +EI NVF Y I+++ RHL LIAD MT G+Y FNR G+E + S +M++ET FL A + +++ L SPS+ I++GK GT SF ++ K+
Sbjct: 7 VGSEITSVDFGILTAKEIRNLSAKQITNPTVLDNLGHPVSGGLYDLALGAFLRNL--CSTCGLDEKFCPGHQGHIELPVPCYNPLFFNQLYIYLRASCLFCHHFRLKSVEVHRYACKLRLLQYGLIDESYKLDEITLGSLNSSMYTDDEAIEDNEDEMDGEGSKQSKD-ISSTLLNELKSKRSEYVDMAIAKALSDGRTTERGSFTATVNDERKKLVHEFHKKLLSRGKCDNCGMFSPKFRKDGFTKIFETALNEKQITNNRVKGFIRQDMIKKQKQAKKLDGSNE-ASANDEESFDVGRNPTTRPKTGSTYILSTEVKNILDTVFRKEQCVLQYVFHSRPNLSRKLVKADSFFMDVLVVPPTRFRLPSKLGEEVHENSQNQLLSKVLTTSLLIRDLNDDLSKLQKDKVSLEDRRVIFS--------RLMNAFVTIQNDVNAFIDS--TKAQGRTSGKVPIPGVKQALEKKEGLFRKHMMGKRVNYAARSVISPDPNIETNEIGVPPVFAVKLTYPEPVTAYNIAELRQAVINGPDKWPGATQIQNEDGSLVSLIGMSVEQRKALANQLLTPSSNVSTHTLNKKVYRHIKNRDVVLMNRQPTLHKASMMGHKVRVLPNEKTLRLHYANTGAYNADFDGDEMNMHFPQNENARAEALNLANTDSQYLTPTSGSPVRGLIQDHISAGVWLTSKDSFFTREQYQQYIYGCIRPEDGHTTRSKIVTLPPTIFKPYPLWTGKQIITTVLLNVTPPDMPGINLISKNKIKNEYW--------------------GKGSLENEVLFKDGALLCGILDKSQYGASKYGIVHSLHEVYGPEVAAKVLSVLGRLFTNYITATAFTCGMDDLRLTAEGNKWRTDILKTSVDTGREAAAEVTNLDKDTPADDPELLKRLQEILRDNNKSGILDAVTSSKVNAITSQVVSKCVPDGTMKKFPCNSMQAMALSGAKGSNVNVSQIMCLLGQQALEGRRVPVMVSGKTLPSFKPYETDAMAGGYVKGRFYSGIKPQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLTKQLEGVHVSYDNSIRDADGTLVQFMYGGDAIDITKESHMT--QFEFCLDNYYALLKKYNPSAL---IEHL--------DVESALKYSKKTL-------------------------------------------KYRKKHSKEPHYKQSVKY----DPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFKSSDGVNEKKFRALMQLKYMRSLINPGEAVGIIASQSVGEPSTQMTLNTFHFAGHGAANVTLGIPRLREIVMTASAAIKTPQMTLPIWNDVSDEQADTFCKSISKVLLSEVIDKVIVTETTGTSNTAGGNAARSYVIHMRFFDNNEYSEEYDVSKEELQNVISNQFIH----------LLEAAIVKEIKKQKRTTGPDIGVAVPRLQTDVANSSSNSKRLEEDNDEEQSHKKTKQAVSYDEPDEDEIETMREAEKSSDEEGIDSDKESDSDSEDEDVDMNEQINKS-----------------IVEANNNMNKVQRDR-------QSAIISHHRFITKYNFDDESGKWCEFKLELAADTEKLLMVNIVEEICRKSIIRQIPHIDRCVHPEPENGKRVLVTEGVNFQAMWDQEAFIDVDGITSNDVAAVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQGMETSTSSFMKMSYETTCQFLTKAVLDNEREQLDSPSARIVVGKLNNVGTGSFDVLAKV 1660
BLAST of EMLSAG00000006751 vs. SwissProt
Match: gi|74860727|sp|Q86H36.1|RPA1_DICDI (RecName: Full=DNA-directed RNA polymerase I subunit rpa1; Short=RNA polymerase I subunit A1; AltName: Full=DNA-directed RNA polymerase I largest subunit; AltName: Full=DNA-directed RNA polymerase I subunit A) HSP 1 Score: 695.656 bits (1794), Expect = 0.000e+0 Identity = 412/1069 (38.54%), Postives = 591/1069 (55.29%), Query Frame = 0
Query: 10 VVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTL--FLVQQKLLDLGLIVESQQCSHL-VPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNK-------------KPSVTHSTRNVEALRKTCIKDFFNV--SLKKKCGECGGYTKKI----SLYQSRFIYEGEDEDASKNKTELNPEEL----QRHLRETWLKDSNILKFMYPML---KDCSDM-------------------------EHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVL-KGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSAL--INVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMC-ESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSE-LRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIV 1019
++ E ++SF ++S+++R LS +I SF+ LG PV GGL+D +GP + C+TC L F CPGHFGHIEL +P NP+ ++ + L+++ C CH HF K + F+ + LL G +V+++ V G EE +E +EV+ D + D NK K + ++E ++ K+FF CG CG Y+ ++ + FI D+ A+KN P ++ TW +L M + K+ DM E D F+ V P + RP + + HPQ + + +V++ +++Q + D + L +N V LQ V+++ D + S N G KQ++E+K GLFR HMMGKRVN+AARTVI+PD + +E+G+P+ FAK L++ PVT +N +L + VINGP +PGA FIE E+G + +R AL+KTLLT K VYRHL++GD +L NRQPTLHKP IM HR +VL K EK +R+HY+ C +YNADFDGDEMN HFPQ+ +A +E + + + QYLVP++G PL+GLIQDH++ GV ++ R F +A++Q ++Y++ +N K I PP I KP LWSGKQ+IS LN + GR + L + +KI + W G+ KG + +S VI E+V G++DK +GA+ Y LVHT YELY + LL+ R+FTN+L + GFT GV D+L+++ + R E +K+ G A A+L + + R F ++ ++ ++ ++D K+ L T+++ +P G K FP+NN LM +GAKGS VN Q+SCLLGQ ELEGKR P M+SG++LPSF YD RAGGF+ RF+TG++PQ++FFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGL V YD TVR+SDGSV+QF YGEDSL++ K+ Y+
Sbjct: 8 LIKEEISSVSFQFYTSDDVRKLSVKQIVEIESFDMLGGPVPGGLHDPALGP-TGPAERCATCSLDFIECPGHFGHIELAIPCYNPVSFQTIFKLLKNKCFHCH--HFKHGKPIINQFIEELTLLFKGDVVKARNLRERNVLLRGY---EEKKKGKSNEEGEEVMESDESDSDKMDTDENKTNGKIICDGVFNAKEIYSGKATHIEDFKREVFKEFFGSFSGYAIPCGNCGAYSPRLRNGDASKSKLFIMPLHDKYATKNSAIKLPTNFSSVKEQTEHGTWFAPWEVLDNMKKLFENEKEILDMLLGHLVPIVTNKGGAKKNVGRQFTKESNVDSLFMRVFPVTPARYRPPNFVNGRRSEHPQNSHYKGMVKSNKMIRQSI---------DAGEGKAKFL-----------VNSVCD-LQMHVNNMYDNSKSNSNTNEVANGIKQILEKKEGLFRKHMMGKRVNYAARTVISPDISLETNEMGVPQYFAKTLTFPQPVTSFNYNQLAQAVINGPEQYPGANFIEDENGHLINLSKESQEKRIALSKTLLTSHPHAPRGVNKKVYRHLLSGDYVLANRQPTLHKPGIMGHRVKVLGKNEKTLRMHYSNCSTYNADFDGDEMNIHFPQSLLASAEIREICANNYQYLVPRNGAPLRGLIQDHILTGVLLTKRDTLFTKADFQAILYASCWSVNTKHPIVTPPPCILKPVPLWSGKQLISAA-LNQLTIGRAPLNLEAPSKIPTKMW-------------GT----KGLEITRDSHVIIRQNEMVAGILDKGHFGASSYGLVHTCYELYDPDVAGSLLTLLGRMFTNYLQSRGFTCGVDDLLMKNKEEKFRVETLKKANEEGYTVAAKF----ADLSKYDEQKARDFFSKALQSEREVARLDGLLKKGLNQYTSKVIDTLIPGGQQKPFPKNNFSLMTVSGAKGSVVNFSQVSCLLGQQELEGKRVPRMVSGKTLPSFQAYDASARAGGFVMDRFLTGVRPQDYFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLSVQYDNTVRESDGSVIQFNYGEDSLEIGKTPYLT 1027 HSP 2 Score: 158.303 bits (399), Expect = 2.199e-37 Identity = 79/199 (39.70%), Postives = 122/199 (61.31%), Query Frame = 0
Query: 1485 LDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDE---NEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIM 1680
D+KK + T+ D KK+ +++T A K V+ K I + ++ + + +I ++G+N+ +F+ D L I+ + N I+ + + YG+EA + +TSEI NVF AYGI+++ RHL L+ DYMTF+G Y+ NR+GIENN SP Q+M+FET FL A++ G D + SPSS I+LG+ GT SF I+
Sbjct: 1416 FDQKKLTF---TISVASDSKKVLMLGIVETEASKFVLKSCKGITRCFVNEKQVGGKTHYSIQSEGVNLSEIFELRDKLKIDEIYTNDIYAILQKYGVEACRQAVTSEISNVFAAYGISVDKRHLILLGDYMTFEGGYRALNRIGIENNTSPFQKMSFETTFSFLSKASLMGDYDTVTSPSSRIVLGQIVKNGTGSFTIV 1611
BLAST of EMLSAG00000006751 vs. SwissProt
Match: gi|75266428|sp|Q9SVY0.1|NRPA1_ARATH (RecName: Full=DNA-directed RNA polymerase I subunit 1; AltName: Full=DNA-directed RNA polymerase I subunit RPA1; Short=DNA polymerase I subunit A1; AltName: Full=Nuclear RNA polymerase A1) HSP 1 Score: 666.766 bits (1719), Expect = 0.000e+0 Identity = 403/1096 (36.77%), Postives = 591/1096 (53.92%), Query Frame = 0
Query: 17 ALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTL--FLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKK--------------------------ISLYQSRFIYEGED-------------EDASK-----------------NKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLT---PSSDPGED-----KMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALIN-------------------VKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGC------SMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELR-RFHRESYKAPQKRM-KVDKGYKERLGPMTNR-INSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYI 1018
++ F + +++R S +++T+P + +G+P GGLYDL++GP D+ +C++C CPGH GHIEL P+ +PL + L ++ +C CH HF + + + Q KL+ G IV ++Q PT S DE S ++ ++E + D L + +V +K+F +S K C C G K + L +S E D ED K +K +L P E++ L+ W + F+ + + S+ + +FFL V PP K RP G + HPQ L ++E+ I+ N ++S K+ + W+ LQ V+ L D + Q G QL+E+K GLFR MMGKRVN A R+VI+PDPYI +++IG+P FA KL+Y VTPWNVE+LRE +INGP++HPGA +S K+ R A+A+ LL+ +++ G+ + K V+RH+ +GD +L+NRQPTLHKPS+M+H+ RVLKGEK +RLHYA C +YNADFDGDEMN HFPQ+E++R+EA N+V + QY P +G PL+ LIQDH+++ V ++ R F D+ + QL++S+ + ++ + PAI KP LW+GKQ+I T +LN I G T+ TK+ D+ R K + G + KK ++ E ++ E VCGVIDK Q+ Y LVHT +ELYG ++ LLS FSR+FT FL T GFT GV D+++ D +E R + +++ +N+G+ ++ ++ ++R R R Y+ + + +D+ L +++ + + L GL+K N + LM +GAKGS VN QIS LGQ +LEGKR P M+SG++LP F P+D PRAGGFI RF++G++PQE++FHCMAGREGL+DTAVKTSRSGYLQRCL+K LE L VNYD TVRD+DGS++QFQYGED +DV +S +I
Sbjct: 29 SVRFSFMTEQDVRKHSFLKVTSPILHDNVGNPFPGGLYDLKLGPKDDK-QACNSCGQLKLACPGHCGHIELVFPIYHPLLFNLLFNFLQRACFFCH--HFMAKPEDVERAVSQLKLIIKGDIVSAKQLESNTPTKSKSSDESCESVVTTDSSEECEDSDVEDQRWTSLQFAEVTAV--------------LKNFMRLS-SKSCSRCKGINPKLEKPMFGWVRMRAMKDSDVGANVIRGLKLKKSTSSVENPDGFDDSGIDALSEVEDGDKETREKSTEVAAEFEEHNSKRDLLPSEVRNILKHLWQNEHEFCSFIGDLWQSGSE-KIDYSMFFLESVLVPPTKFRPPTTGGDSVMEHPQTVGLNKVIESNNILGNACTNKLDQS----------------------KVIFRWRNLQESVNVLFDSKTATVQSQRDSSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPPCFALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDKSSTMKLPSTEKA--RRAIARKLLSSRGATTELGKTCDINFEGKTVHRHMRDGDIVLVNRQPTLHKPSLMAHKVRVLKGEKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGEPLRALIQDHIVSSVLLTKRDTFLDKDHFNQLLFSSGVTDMVLSTFSGRSGKKVMVSASDAELLTVTPAILKPVPLWTGKQVI-TAVLNQITKGHPPFTVEKATKL-PVDFFKCRSREVKPNS-GDLTKKKEIDESWKQNLNEDKLHIRKNEFVCGVIDKAQFAD--YGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQTHGFTCGVDDLIILKDMDEERTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIERILYEDGESALASLDRSIVNYLNQCSSKGVMNDLLSDGLLKTPGRNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFI 1076 HSP 2 Score: 255.758 bits (652), Expect = 3.009e-67 Identity = 178/553 (32.19%), Postives = 280/553 (50.63%), Query Frame = 0
Query: 1165 KGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVT-EKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDD-DYDEGLSDE--ETQMLNDFEKDENKSDEDD-----ESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKA-----------YLTKDENEETTITTD-----------GINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRV-GIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKLSI 1685
+ E+ ++ +K+ S+ PGEPVGVLA QSVGEPSTQMTLNTFH AG GEMNVTLGIPRL+EILM A++NIKTP L + + + + +L + ++D+++S+ ++ +++ + C I K+++ + Y +T + F K L DA K++ + I + D+ D ++ + ++ E + DD + K+ ++ D+ DY+E DE E ++ E E S+ +D E + + E+ + QK+ + +++ +KRR V+ K+ HI EK E+ F D + + + + A K I I + Y + E I+ D G++ A+++F D LD+ L NSIHDM +G+EAA TI EI +VFK+YGI+++ RHL LIADYMTF G Y+P +R+ GI + SP +MTFETA F+ A G+KD L++PS+ I LG P GT F +MQ++ +
Sbjct: 1135 RQEELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPLLKGKTKEDANDITDRLRKITVADIIKSMELSVVPYTVYENEVCSIHKLKINLYKPEHYPKHTDITEEDWEETMRAVFLRK----LEDAIETHMKMLHRIRGIHNDVTGPIAGNETDNDDSVSGKQ--NEDDGDDDGEGTEVDDLGSDAQKQKKQETDEMDYEENSEDETNEPSSISGVEDPEMDSENEDTEVSKEDTPEPQEESMEPQKEVKGV--KNVKEQSKKKRRKFVR-----AKSDRHIFVKGEGEK----FEVHFKFATDDPHILLAQIAQQTAQKVYIQNSGKIERCTVANCGDPQVIYHGDNPKERREISNDEKKASPALHASGVDFPALWEFQDKLDVRYLYSNSIHDMLNIFGVEAARETIIREINHVFKSYGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGEKDTLETPSARICLGLPALSGTGCFDLMQRVEL 1670
BLAST of EMLSAG00000006751 vs. SwissProt
Match: gi|322510106|sp|P18616.3|NRPB1_ARATH (RecName: Full=DNA-directed RNA polymerase II subunit 1; AltName: Full=DNA-directed RNA polymerase II subunit RPB1; Short=DNA polymerase II subunit B1; AltName: Full=DNA-directed RNA polymerase III largest subunit) HSP 1 Score: 488.034 bits (1255), Expect = 1.218e-142 Identity = 401/1363 (29.42%), Postives = 642/1363 (47.10%), Query Frame = 0
Query: 18 LSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIYEGEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTG-RIMTIHPQGASLQILVETVTIMK-QIVQNINEESSEDLSSEA------QEMLRTIRGDTMPMKL-NYVWKVLQNCVDHLLDREM----NASQKNSSGWGFKQLIER---KTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHP---GALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFH-RESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVC--KSQYIVPNQM-------AFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWS-----EDDDSQNHFKKKYVQVP-DPCTSV--FRPDSNFGSVAEKVEDLIQSYLKNNKSDKGEQFRDI---MYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALS-DVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKL 1339
+ FG+ S +EIR +S + + + + + G P GGL D R+G DR + C TC+ CPGHFG++EL P+ + F K +L+++R C +C K+ DEE ++ + ++ + L+ +LD+ K + +++ ++ + +KK G CG K+++ + I E + + ++ + PE +R ++T D + +LK SD + CQ G P L++L ++ ++ + S +DL+ + E L+ + P + + ++LQ + D E+ A+QK SG K + R K G R ++MGKRV+F+ARTVITPDP INIDE+G+P A L+Y VTP+N+E L+ELV GP+ P GA +I + GQR L L SSD + V RHL +GD +L NRQP+LHK SIM HR R++ RL+ +V YNADFDGDEMN H PQ+ R+E L+ V + + P+ P+ G++QD ++ K++ R F ++ + + + GK+ PAI KP+ LW+GKQ+ + II I ++ S W + T +++V GEL+ G + K G + SLVH +E G ++ + L + +L GFT+G+ D + S E E + K ++ +R+F +E P + M+ ++ R+ + N+ NNL+ MV AG+KGS +N Q++ +GQ +EGKR P GR+LP F D P + GF++ ++ G+ PQEFFFH M GREGLIDTAVKTS +GY+QR L+K +E ++V YD TVR+S G V+QF YGED +D +SQ + +M F Y+ NP+ L S+ + + + EL+ + K+ + + G + + D++ +I + ++F+ + ++K S E D+ + +++ + VP D SV + + F ++ + + L+ K + E F + + +++++S+V PGE +G +A QS+GEP+TQMTLNTFH+AG NVTLG+PRLREI+ VA IKTPS ++ P E+ K K K +CAL L SV ++ II+ +F+ D V+P I ++ R I L ++DKKL
Sbjct: 18 VQFGILSPDEIRQMSVIHVEHSET-TEKGKPKVGGLSDTRLGTI-DRKVKCETCMANMAECPGHFGYLELAKPMYHVGFMKTVLSIMRCVCFNCSKIL-------------------------------------ADEEE-----HKFKQAMKIKNPKNRLKKILDACKNKTKCDGGDDIDDVQSHSTDE----PVKKSRGGCGAQQPKLTIEGMKMIAEYKIQRKKNDEPDQLPEPAER--KQTLGADR-----VLSVLKRISDAD--------------------CQLLGFNPKFARPDWMILEVLPIPPPPVRPSVMMDATSRSEDDLTHQLAMIIRHNENLKRQEKNGAPAHIISEFTQLLQFHIATYFDNELPGQPRATQK--SGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKTGAKYIIRDDGQR-------------LDLRYLKKSSDQHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIRIMP-YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLM-WWEDFDGKVPA--PAILKPRPLWTGKQVFNLIIPKQI------------NLLRYSAWHADTETGFITP-------------GDTQVRIERGELLAGTLCKKTLGTSNGSLVHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFTIGIGDTIADSSTMEKINETISNAKT-----------------AVKDLIRQFQGKELDPEPGRTMR--DTFENRVNQVLNKARDDAGSSAQKSLAETNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFDGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRTFKYEIDDENWNPTYL---SDEHLEDLKGIRELRDVFDAEYSKLETDRFQLGTEIATNGDSTWPLPVNIKRHIWNAQKTFKID--LRKISDMHPVEIVDAVDKLQERLLVVPGDDALSVEAQKNATLFFNILLRSTLASKRVLEEYKLSR-EAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA-KRIKTPSLSVYLTP---EASKSKEGAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDFEFVRSYYEMPDEDVSPDKISPWLLR-------IELNREMMVDKKL 1225 HSP 2 Score: 73.9442 bits (180), Expect = 1.206e-11 Identity = 53/178 (29.78%), Postives = 90/178 (50.56%), Query Frame = 0
Query: 1504 KKLDFSNLIKTAAVKGVIYEIKNINKAYLTK------DE------NEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGI-ENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGK 1668
KK++ SN++ A++G I +INK ++ + DE +EE + T+G+N+ A+ +D+ D R N + ++ GIEA R + E+ V G +N+RHL ++ D MT+ G R GI N+ PL + +FE + L A + D L+ + I+LG+
Sbjct: 1282 KKIE-SNMLTEMALRG----IPDINKVFIKQVRKSRFDEEGGFKTSEEWMLDTEGVNLLAVMCHEDV-DPKRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQ 1453
BLAST of EMLSAG00000006751 vs. SwissProt
Match: gi|133316|sp|P16355.1|RPA1_TRYBB (RecName: Full=DNA-directed RNA polymerase I subunit RPA1; Short=TbRPA1; AltName: Full=DNA-directed RNA polymerase I largest subunit) HSP 1 Score: 463.381 bits (1191), Expect = 1.530e-134 Identity = 350/1080 (32.41%), Postives = 516/1080 (47.78%), Query Frame = 0
Query: 53 LYDLRMGPYSDRYM---SCSTCLLRF------DFCPGHFGHIELP-------------LPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESM---SRTGSE--YNDEVIVQKLMDHL-----QNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNV------SLKKKCGEC----------GGY--------------TKKISLYQSRFIYEGEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDI---------FFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINE-ESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVT---PWNVEELRELVINGPNVHPGALFIETE--SGQRKMIDGNDPIQ--REALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALI-----NVKGKI-KCLP-PAIFKPKKLWSGKQIISTII-----LNSIPP-GRE---SVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIG----DECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSV 1033
YD RMG + +C TC + C GHFG + +P L V+NP + L R C CHK F L D GL ++ HL+ T T+ ++M R +E ND I+Q +D + + + K VT + + +R D N+ S C C GG K Q +E + + T + ++ H++ + K+ IL +YP L + S + FFL+ + PP P + + + ++ G L I E + I+ + + E LS+ + R+ D + LQ VD +N+ K K GLFRM+MMGKRVN A R+VI+PDP++ +E+ LP A+ LS+ VT P + L+ V+NGP +PGA IE +G+ + +D N P Q R+ A+ S VYRH++NGDR++ NRQPTLHKPS+M +R +VL G K +R HY S+NADFDGDEMN H PQ+ R+E + L+ + YLVP G P++GLIQDHV AGV +++R +FFD + + QLVY+ + NV + + +P PAI P+ +W+GKQ+IS ++ L++ GRE +TL ++I+ S + R S +V +S V+F+N EL+ G + K Q GA+ S H YELYG + +L +AF R+ L EG +L + D+ + + E R +++++L +I DE AT+ AP + +I +P+ ++ FP+N+L LM +GAKGS +N Q+S LGQ +G R M S ++LPSF + + R+ GF G F +GI+P E+ H MAGR+GLIDTAVKTSRSG+LQRCLIK LE LVV++D TVRDS+GSV+QF YG D LD CK+ + +M + DN+ V
Sbjct: 35 FYDTRMGNFDANPFPPQTCQTCAASLTGKYGNERCHGHFGFVGMPRIRPGSAHSDSDRLVVLNPHLAMDADRLFRAKCFFCHKFRAPTFDVERFRQALVLADHGLPGDAL---HLLDTVPTAKGHDAMLNHRRMANEEIVNDVSILQSYVDRILRQRASGCSEEDAKARVTMAQKGTVDVRN----DICNMAISHLRSFSGPCSHCTAISPTFLKRGGIIFFLFRKSNLVTNIAKGFLTQQEVSEWEAVNRLHGRTGTYFDGRQMLFHMKNLFAKEQAILGLLYPNLGEPSVFTKTNKVVPASERYKLFFLDRILVPP---LPLRLSSGV-RVNDNG--LIIPDEQTRALSDILGFVEQIECFHTLSANSTNG-RSFITDAQRAVNESNLRNLQQKVDEFYAEIVNSFAK-------------KEGLFRMNMMGKRVNQACRSVISPDPFVEPNEVLLPRPLARALSFPEQVTCFAPARMNLLKHCVVNGPRKYPGATHIELRHANGEIRSVDLNVPEQTRRQHAARFFAMAQSG----VTLIVYRHILNGDRVIFNRQPTLHKPSMMGYRVKVLSGSKTIRFHYVNGNSFNADFDGDEMNVHVPQSIETRAEVETLMDANINYLVPTSGRPIRGLIQDHVAAGVLVTLRDKFFDHSTFVQLVYNGVGPYIQENVGITLAELIPIPAILMPRPMWTGKQLISVMVRFSSGLSAASDCGREIEGGITLKGTSQIQPSAFDRIPAGSCDAVRAKSGAV------VDSTVMFANSELITGFMCKKQLGASNMSAPHHVYELYGPHRTGQLFAAFGRVLLLALRKEGLSLAMDDMFLVDE--ERRCDLLRKLDDIALDVPDEEATA------------------------APM------------IADYATKIQQEFVPQRMLVPFPKNHLLLMTISGAKGSNLNATQMSLQLGQQLFDGLRVKRMNSSKTLPSFFTNEKRARSFGFAMGSFASGIRPAEYTIHAMAGRDGLIDTAVKTSRSGHLQRCLIKGLESLVVHWDRTVRDSNGSVIQFMYGGDGLDPCKASTLTAWEM--MKDNVVDV 1037 HSP 2 Score: 83.5741 bits (205), Expect = 1.395e-14 Identity = 49/107 (45.79%), Postives = 68/107 (63.55%), Query Frame = 0
Query: 1171 DIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCA----LSDVLESV 1273
DI + + ++ +PGEPVG+LA Q+ GEPSTQMTLNTFH AG +VT GIPRLRE+L+ AS N ++V+ + + E E +K+ K+ R L+D L V
Sbjct: 1146 DITARRRLWALCEPGEPVGLLAAQAAGEPSTQMTLNTFHTAGSTVSHVTEGIPRLRELLIYASVN---KAAVVVPVTNATE-EDEKVIAKMLRAGVAAKLTDCLAKV 1248 HSP 3 Score: 74.7146 bits (182), Expect = 6.899e-12 Identity = 44/118 (37.29%), Postives = 68/118 (57.63%), Query Frame = 0
Query: 1569 IHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVG-IENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKLSI 1685
I DM Y+GIE+ + E+ +F Y ++ RHL+LIAD T G ++ FN G I + SPL QMTF ++ +L A +G D+L+S SS I++G+ GT+S ++ +I
Sbjct: 1619 IRDMGTYFGIESGYAALYDELNKLFNRY--NVDPRHLSLIADTSTHRGRWENFNFTGVISTSASPLFQMTFASSKRWLHRAVSRGMSDDLESFSSAIMVGERPRVGTASVRLSTDTAI 1734
BLAST of EMLSAG00000006751 vs. Select Arthropod Genomes
Match: gb|EFA05003.1| (DNA-directed RNA polymerase I subunit RPA1-like Protein [Tribolium castaneum]) HSP 1 Score: 1444.87 bits (3739), Expect = 0.000e+0 Identity = 773/1708 (45.26%), Postives = 1073/1708 (62.82%), Query Frame = 0
Query: 7 TRNVVHNEAG-------ALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEY-----NDEVIVQKLMDHL--QNVLDSNKKPSVTHSTRNVEALRKTCIKDFFN-VSLKKKCGECGGYTKKISLYQSRFIYEGEDEDASKNKTEL------------NPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNI-NEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLP-HVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILE-YALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
+RN+ ++ G ++ F MF+ EEI+ L +I P + + LGHP+ GGLYD +GP +++ C TC FCPGHFG+IELPLPVVNP+FY+ + T++R +C+SC + K +Q +LL+ GL+ E+ + ++ + L ES+ + E + Q++ + L + VL T+N E LR + + V ++ C C +K+ + +++ I + + +K TE+ P+E + ++R W ++ +++ + +L + EHPTD+F+ +V+ PP RP ++ HP + ++ +++ I+Q + N+ L EA+ +G + KLN W+ LQ+ VD L+D +N++ G KQ+IE+KTG+ RMHMMGKRVNF+ARTVITPDP +NIDEIG+PEVFAK L+Y VPVT WNVEELR++++NGP+VHPGA+ +E E G K I+ N+ Q+E++ K LLTP G +K V+RHL NGD +LLNRQPTLHKPSIM+H ARVLKGEK RLHYA CK+YNADFDGDEMNAHFPQNE+ARSEA NLV V QYLVPKDGTPL GLIQDH+IAGVK+S+RGRFF++ +Y+ V+ AL N GKI LPPAI KP +LWSGKQI+ST+ +N IP G E + L + KI + W PR WK GS V +M E+EV+ GEL+ GV+DK YGAT Y LVH YELYGG ++ LLSA +++FT FL EGFTLGV DIL A++ R +I++ + IG + T+ + + + + + + S K P+ R VD+ YK L TN IN CLP GL+ KFPENNLQLMVQ+GAKG+TVNTMQISCLLGQIELEGKRPP+MISG+SLPSF ++ PRAGGFIDGRFMTGI+PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGL V YDLTVRDSD V+QF YGED +D+ K Q++ Q+ FL DN K +I+ LK++ + E + ++ ++++ + G L+ R + S + + K G F T + K W + D D ++ F+++ + PDP S+++PD +FGS+ EK+E+L+ +Y NK + +QF++++ K M+S+ PGEPVG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILM+AS NIKTPS I FLP LE + + LR L R ++DVLE V VT ++++ + R +R QFLPRK YKNDF V P IL ++ R FF ++ + + + LV+ D++++QK AS+D+EE+ +DADA E D DE D E + K + E +ES ++ + DE + P + + + V+ S++ + Y D KK W EIT G P++ KKLD + +++ A K V++E NI +A +T +N+ T+ TDGINI M ++ LLD+NRL CN IH MA YGIEAA + I E+ +VF YGI ++ RHL+LIADYMTF+G+++P +R G+E++ SPLQQMTFE+++ FLR+ATI GK+DNL +PSSC+++GKP GT F+++ K+
Sbjct: 2 SRNIRKHDTGPKHLSFDSVVFSMFTKEEIKKLCITKICTPLTLDPLGHPLSGGLYDKSLGPMTEKSEPCGTCRKNLYFCPGHFGYIELPLPVVNPIFYRMIGTILRMACLSCFRFQIPEHVKYSITLQIRLLNCGLVTEAVEIANSIAL--LILVHESLENIPEDVVLPIRKYETLAQEMQEKLNGEYVL-----------TKNTETLRNQFVNEMLREVKARETCMHCKHSMEKVQVLRNKIIL-SKKRNVAKGSTEVLGKVKAFEAKYVTPDESRTYMRNIWKEEKELMREIIAVLGGV-EGEHPTDVFYWDVIPVIPPNMRPVNIVNSRVSEHPTSQLYKNIIHNTILLRLIIQVVKNKGDLGSLPPEAKGAYNVSKGSSPIEKLNLAWESLQSEVDSLID---TTYIRNANVAGLKQIIEKKTGIIRMHMMGKRVNFSARTVITPDPNLNIDEIGIPEVFAKHLTYPVPVTSWNVEELRKMIMNGPDVHPGAVMVEYEDGTIKRINTNNTTQQESILKRLLTPDKIVGFRGVKRVHRHLCNGDVLLLNRQPTLHKPSIMAHTARVLKGEKTFRLHYANCKAYNADFDGDEMNAHFPQNELARSEAYNLVNVCNQYLVPKDGTPLSGLIQDHMIAGVKLSLRGRFFNEVDYKHFVFQALANKTGKIILLPPAIIKPCQLWSGKQILSTVFINIIPEGHERINLTASAKISAKAWQTAPPRKWKGG--GSRFVNPN-TMSEAEVVIRGGELLVGVLDKTHYGATPYGLVHCMYELYGGVYATGLLSALAKLFTRFLQKEGFTLGVHDILTVEKADQRRRQIIEGARKIGLDVITTALDMPRD-SPIEEIVDKIRENSVKNPKWRATVDRQYKTALDSFTNDINKTCLPAGLVLKFPENNLQLMVQSGAKGTTVNTMQISCLLGQIELEGKRPPVMISGKSLPSFPIFEFAPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLTVGYDLTVRDSDKCVIQFLYGEDGMDISKLQFLNSKQLVFLADNSKGMIDKKALKMLKD----------EHQKSVKAHKQQLADWCEKFGHPLQRERKSPFSLFSSVVRAKTK-GTDFGTKEMTKLWKKADKDIKDSFRQQCIPCPDPVNSIYQPDHHFGSLNEKLEELMNTYQSTNKK-QTKQFQNMLKLKAMRSLCAPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPSMEIPFLPVENLEEKAEDLRKMLTRVVVADVLEKVDVTVELNVEPVRQHRYT-LRFQFLPRKYYKNDFYVGPKYILKHMTRKFFGEMFTAIRKLSKVTSNLVM--------------------MDEEKRQK-------ASNDDEEETNDADANE---------DSSDEEPEDTEDAKTGNKFKQIHDDQEPEESEREDSGDE---DTETAPPVDDKTNEAVVE---------------SYNFAQNYIYDTKKHHWCEITFGLPLEFKKLDLTAILRDVAAKSVLWETPNIKRA-ITYMKNDVLTLRTDGINILEMSKYHALLDLNRLNCNDIHKMAETYGIEAAMKIIVKEVQDVFNVYGIKVDPRHLSLIADYMTFNGTFEPLSRKGMESSASPLQQMTFESSLTFLRNATIGGKRDNLTNPSSCLMVGKPCVTGTGCFEVLHKM 1619
BLAST of EMLSAG00000006751 vs. Select Arthropod Genomes
Match: XP_001121092.2 (PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Apis mellifera]) HSP 1 Score: 1391.71 bits (3601), Expect = 0.000e+0 Identity = 781/1713 (45.59%), Postives = 1084/1713 (63.28%), Query Frame = 0
Query: 12 HNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMS---RTGSEYNDEV-IVQKLMD-HLQNVLDSNK--KPSVTH-----STRNVEALRKTCIKDFF-NVSLKKKCGECGGYTKKISLYQSRFIYEGEDEDASK-----------NKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGE--DKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKW-SEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSD---KGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHF---LPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVL-----IPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPD-SSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQK--RRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
H + L F MF++ +IRNLS +I P SFN LGHP++GGLYD +GP + C TC CPGHFGHIELP+PV+NPLF+K L LI+ +C++C L K L + KLL G + + + SL++E M + + YN ++ VQ ++D +++N+L+ + + V + +T+N+ TC+++ + K C C KI+ +++ + +++ + + P++ + +LR+ W + N LK + P D+E+PTDIFF V+ PP RP + M HPQ + +++ +++ I+Q I + +E L E + + I+G+T KL+ W+ LQ VDHL+DR+MN + +++ G KQ+IE+K G+ RMHMMGKRVNFAAR+VITPDP +NIDEIG+PE FA KL+Y PVTPWNV +LR+LV+NGPN+HPGA+ IE E G + I +D IQREA+AK LLT S + +K V+RHL NGD +LLNRQPTLHKPSIM+H+AR+LKGEK +RLHYA CKSYNADFDGDE+NAH PQNE+ARSE N+ VS QYLVPKDGTPL GLIQDH+I+GV++++RG FF + +Y QLVY+AL ++ I LPP+I KP LWSGKQIIST+I+N IPP + + L + KI W + R WK S+ +M E+EVI NGEL+CGV+DK YGAT + LVH +ELYGGT SS+LLSAF ++F L GFTLG+ DIL+ A++ R+EI+ + IG+ S + L N +N + + P+ R +VD+ YK L TN IN CLP GL+KKFP+NNLQLMVQ+GAKGSTVNTMQISCLLGQIELEGKRPP+MISG+SLPSF YD PRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGLV+NYD TVRDSDGS+VQ YGED LD+ S+++ Q+ FL DN ++IN +K + E + K K + + K R F RFS +N +ID ++GRS ++KW ++ + K ++ PDP S +R D +FG ++E++E+LI YL N + + + RD++ K MK + PGEPVG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILM+AS NIKTPS I F L +V++ +KL++KL +C LS+VL+++ V K+ + R I I + +LP K+YK +F V P IL E FF ++ + I LL V E S + + +D +PD ++ K + E H SSDEE +DADAT ++ ++R ++ E +EE + +N+ E D +++ + + + E D S I+ +E+ R+ ++KN+ ++ LEY DE+K W ++T P+ KLD +IK A + +++E+ I +A+ ++ N ET + TDGINI MF++D L++N+L N I+ +++ YGIEAANR I E+ +VFK YGIT++ RHL+LIADYMTFDG ++P +R G+E + SPLQQM+FE+++ FL++A +QGK+DNL+SPSS ++LG+P GT ++ K+
Sbjct: 15 HLDPKCLMFSMFTANDIRNLSVAKIRTPLSFNILGHPLKGGLYDPALGPLLESSDPCGTCGCNVFKCPGHFGHIELPMPVINPLFHKGLCMLIKLACLNCFNLQIPSYVKLLLSAKLKLLQQGYLSDLE-----------SLEQEVMIVVFNSDNPYNVDIQSVQNVIDNYIENLLNKQRFNQSFVQYDETDINTKNINTQWHTCVENVLKQYTTPKICVYCEEPISKITTLKNKIMTTKISNLSNETIQSRGVIHKLDTIMIMPDQSKDYLRKLWQNEKNFLKVIIPCF-GMVDIEYPTDIFFFEVIPVLPPIVRPVNFINGQMIEHPQSQVYKSIIQDCLVLRNIIQTIQDGDTEQLPEEGKVVYDHIKGNTAIEKLHNAWQNLQVNVDHLMDRDMNRTTDSANCQGLKQVIEKKEGIIRMHMMGKRVNFAARSVITPDPNLNIDEIGIPEAFALKLTYPTPVTPWNVVQLRQLVLNGPNIHPGAVMIENEDGSIQRISISDAIQREAIAKRLLTTSDKANKFFKGIKIVHRHLQNGDILLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKSYNADFDGDEINAHHPQNELARSEGYNIANVSNQYLVPKDGTPLSGLIQDHIISGVRLTVRGTFFSREDYMQLVYAALSTIQDNIILLPPSIIKPIALWSGKQIISTVIINIIPPNQARINLTANAKINVKQWQIEKTRHWKCGTEFSNP----NTMSEAEVIIRNGELLCGVLDKTHYGATPFGLVHCIFELYGGTCSSKLLSAFGKLFQAALQRNGFTLGIEDILLLKKADKKRKEIISNCRKIGENIQKSVLEL-PNDTPMNIVTSKMEESYWNDPKFRAQVDRKYKTALDIYTNDINKICLPAGLLKKFPDNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPPLMISGKSLPSFPAYDPTPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVINYDSTVRDSDGSLVQIYYGEDGLDIPGSRFLKKEQLNFLIDNKNAIINEEMIKKLKEDSDTDKILKLVKKIKKWESKNGNTLQKKRISPFTRFSMENMNIKSSKYKEIDKQSGRSKAAVSYMRKWIRTTEEDKKWIYNKCIRCPDPVMSKYRQDIDFGVLSERLENLIDEYLTNKSKNFIIRKKDLRDLLSMKVMKVVCPPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPSMEIPFRKDLKNVIK-RSNKLKLKLTKCILSNVLDNIIVNRKMEQW-PKRQLIYTITINYLPHKSYKGEFCVQPHEILKKTEEIFFKEIFKEIKKVAKITGALLH---VEEEKKSIYEDDVLLDQIEPDQGTESILKPQTNLGEMHESSDEEAAAEDADATLIRTISRHRENQEYEDPEEEEMEDINEKEDDIIENETEKLRIEVQEQKEDEDDDDIEKEKSEYIT-NEIYNIHRKKNIKNMYVNA------LEYDYDEEKFSWCKLTFWLPLKMLKLDLPTIIKNVANRVILWEVPCIKRAFTFQNNNGETILKTDGINIIEMFKYDKSLNLNQLYSNDIYSISQTYGIEAANRVIIKEVRDVFKMYGITVDSRHLSLIADYMTFDGRFQPLSRKGMEESASPLQQMSFESSLNFLKNAALQGKRDNLESPSSRLMLGQPCKSGTGICSLLVKI 1698
BLAST of EMLSAG00000006751 vs. Select Arthropod Genomes
Match: EFX75641.1 (hypothetical protein DAPPUDRAFT_323145 [Daphnia pulex]) HSP 1 Score: 1319.29 bits (3413), Expect = 0.000e+0 Identity = 741/1762 (42.05%), Postives = 1060/1762 (60.16%), Query Frame = 0
Query: 4 LKKTRNVVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHS-----TRNVEALRKTCIKDF---FNVSLKKKCGE-CGGYTKKISLYQSRFIYE--------------------------------GEDEDASKNKTE----LNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGED-------------KMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALIN--VKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNAN-LGSLNSELRRFHRESYKAPQ---KRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSV--INPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKW-SEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKG-EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLI--DATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQ----KGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNE---DELLGQKD---DIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDE--NEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
+ K RN+ H +++FG ++ +I +S +E+T ++FN LGHP+ GLYD++MGP+S+ C TC L CPGHFGHI LPLP +PLF + ++ +++ +C C K + + Q +LL GLI+++ DE+ T + N+E + + ++ + + + + +T TR+VE ++ +K F F KKKC + C G ++I Y+SR +Y G+ K K + P++ + LR W D + MYP+L +++++PTD+FFL V++ P K RP G IM+ + Q A L+ +V+ ++K + +++ +++ +++ L++++G+T+ KL W LQ V+ ++D N +KN GFKQ++E+K GL RM+MMGKRVNFAAR+VITPDP ++++E+G+P+ FAK+L++ PVT +NV E+R+ V NGPNV PGA IE +G++ ++ ND R A+AKTLLTP + K K V+RHL GD MLLNRQPTLHKPS+M+H+ARVL GEK +RLHYA CK+YNADFDGDEMNAHFPQ EVARSE N+ V QYLVPKDGTPL GLIQDH+IAGVK+++RG+FF++ +YQQLV++ L GK K LPP I KP LWSGKQI+ST+I+N P G++ + + S KI DW R W+ G + +G SM E+EV+ +GEL+ GV+DK YGAT YSLVH F ELYGG S LLS F+R+FT +L +GF+LGV DILV A++ R +I+K+L+ +GD AT V + + E+ R + Q K+M +D+ YK + N +N AC+P GL K FP+NNL LM+Q+GAKGS+VN MQISCLLGQIELEGKRPP+MISGRSLPSF+ +DT PRAGGFI GRFMTGI+PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCL+K LEG+ V YD TVRDSDG V+QF YGED LD+CKSQ++ + FL N V I P + E D +L + K + K R FL +S S+ + D + K GR+F + + W + + + + KK PDP + F N E++ ++ YL G ++ ++Y K + + +PGEPVG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVA++N++TPS I L + +KL++KL R L+DVLE+V+VTE +S+ G R RI ++ FLP +YK+ F V P +L Y E+ F ++L+P I +A K+ + E ++ N+ + + + ++ + + +E + DD AT+ K + + + ++ E + FE D K ED E + ++ ++ L ++D D+ + + TH LT+ ++ S+ I +Y D L +TL P+ +K+D S+ +K A V++ + I +A++ E N + I TDG+NI+AMF + +LD+NRL N IH++A++YG+EAA+R I E+ NVFK YGIT++HRHL+LIA +MT GSY+PF+R G+ + SP QQM+FETA FL++AT+QGK D L++PSS +I+G P GT SF +M KL
Sbjct: 1 MAKERNI-HYYPESVTFGFHTAHDITKISVVEVTQTDTFNALGHPITNGLYDMKMGPFSNDAGKCPTCSLGMLHCPGHFGHIALPLPCYHPLFLRNVVAIMKMTCPVCKTFAIPEKDKLVLVGQLQLLKYGLIIDAHNLWQKTKPTVEDYDEDDGKAT--QLNEEQLDELRVNIEEEIKRAKEDAGITCGDNPPPTRHVENMKMEFLKLFMLKFKTG-KKKCAQGCKGGFERIQQYRSRIVYSLRHDTPTTSLGGNMMINPVEFEEDLEDEDDVEGKTPSKHKRKPRATMYVTPKDARDLLRLLWENDKELFGQMYPVLFK-TNIDYPTDVFFLEVISVMPSKFRPVNIVGGIMSDNKQTAVLRKIVQDTYVVKTALFCHEQKTMDNVPEDSKRFLKSLQGETLLEKLQTAWHALQENVNMIVDASTNKDEKNM--IGFKQILEKKEGLLRMNMMGKRVNFAARSVITPDPNLDVEEVGVPDCFAKRLTFPTPVTSFNVCEMRDAVRNGPNVWPGATHIEESNGKKINLNPNDEKSRAAIAKTLLTPFEASSQAAVYEKGGKIRTLFKPKIVHRHLKTGDIMLLNRQPTLHKPSMMAHKARVLMGEKTLRLHYANCKAYNADFDGDEMNAHFPQGEVARSEGYNIAAVPHQYLVPKDGTPLSGLIQDHMIAGVKLTMRGQFFNRTDYQQLVFAGLGGREYDGKTKLLPPTILKPVALWSGKQILSTVIINLTPKGKKLINMDSTAKISVKDWQTVPVRKWE----GGGTELQGNSMTENEVVIQHGELLVGVLDKMHYGATSYSLVHLFNELYGGQYSCRLLSCFARLFTTYLQLKGFSLGVEDILVTPRADKKRRKILKRLETVGDGVATKAVGVTPQEVEKSGMEIVRKKMQEIHFSQNSLKKMAIDREYKGVTDQINNEVNRACIPGGLHKLFPDNNLALMIQSGAKGSSVNAMQISCLLGQIELEGKRPPLMISGRSLPSFVAFDTSPRAGGFISGRFMTGIRPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLVKHLEGVSVAYDGTVRDSDGLVLQFLYGEDGLDICKSQFLNDKGIPFLVANRDCVRLIEPVS----DESEQKEVDHAKKLVRRWLNKHGSLSKEKVRKSGFLNYS---SQCGIKD-DFEKGKNGRTFTAFEIEQAWLALSAEERAKYSKKTESPPDPVNAKFSFTRNVDVFDEQLNTMMSRYLDRPGVPIGKKELTRLVYNKAVAASCEPGEPVGMLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVAAANLQTPSMDIPILGPKALRKAEKLKLKLTRVTLADVLENVYVTEGLSISGGERARIYGLKFNFLPHASYKDRFCVKPKQVLHYFEKTFLPRILLPNIKKEAEAQGKQSLFECKSAVQPRKANVKEDGAEGAGEEGETTANGRAEKDDEDDFDEGSNANDDDFATQRAKDADEHEYEDEDEADKEPVNE-DGFEDDTPKPKEDAEGEETDDDQPNEKTLNEEDAAFDVTPSKEEMDQETAEAYETH--KLTVIQEHSW-ICDYDFDSTGFLSCTVTLSVPLFVEKVDLSSSLKKWAESSVVHHVMKIKRAFVVAPESDNGDIIIKTDGVNIQAMFDYAGILDLNRLYTNDIHEVAKHYGVEAASRVIVKEVNNVFKVYGITVDHRHLSLIASFMTSGGSYRPFSRHGMADCTSPFQQMSFETATEFLKNATLQGKTDFLKTPSSRLIMGLPGCEGTGSFNLMAKL 1739
BLAST of EMLSAG00000006751 vs. Select Arthropod Genomes
Match: EEB14336.1 (DNA-directed RNA polymerase I largest subunit, putative [Pediculus humanus corporis]) HSP 1 Score: 1261.51 bits (3263), Expect = 0.000e+0 Identity = 738/1717 (42.98%), Postives = 1039/1717 (60.51%), Query Frame = 0
Query: 14 EAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNV-LDSNKKPSVTHSTRNVEALRKTCIKDFF-NVSLKKKCGECGGYTKKISLYQSRFI----------------YEGEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDP--IQREALAKTLL-TPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYK-APQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKV-RGMKCRDGAFLRFSRDNSESSMHDI-----NKIDPKTGRSFRTNFLIKKWSEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYL----KNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEK---DKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKK---LVVETGTSKSKSNNNIDDKDPDSSDKQ----QKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDD---YDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKLSI 1685
E + FG+F++ +I NLS +EI FN L HP++ GLYDL MGP SC TC C GHFGHI LPLPV+NPLF+KE+LTL++ SC C+KL + LF+ Q KLLD G + E++ + T +L E ++ + V+ + ++L+ + LDSN P S+R++E+LR + +F + L K C C K+I +Q++ I ++ + + T + P+E + LR+ W + ++++ + P+LK+ S++ +PTD+FF++V+ PPK+RP ++ V+ ++ E + + IRG T+ KL+ W LQN +D LLD G KQ++E+K G+ RMHMMGKRVNFAARTVITPDP +NI EIG+PE FAKKL+Y V V +NVEELR++V NGP+V+PGA IE E+G + G + +R ++K LL + DP K K V+RHL+NGD +LLNRQPTLH+PSIM+H ++LK EK RLHY+ CK+YNADFDGDEMN H PQ E++RSE N+V V+ YLVPKDGTPL GLIQDH+++ V+++++ + F++ +Y QLVY L + G I LPP I KPKKLWSGKQIISTI++N IP ++ ++ KI W +PR W + K M ES +I G LV GV+DK +GAT + L H YELYGG SS+ L++ R+ T FL GFTLGV DILV++ A+++R++I+++L+ GDE A + L L R RE +K + K+D+ YK +L TN IN CLP+GLI +FPENNLQLMV +GAKGSTVNTMQISCLLGQIELEGKRPP MISG+SLPS+ +DTQP AGG+ID RFMTGI PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEG+ + YD TVRD DG+V+QF YG D L+V KS + P M FL++N+ +V+ S ++ S + + KI R++V G+ F+ S+S +DI K+D +TGR+ + ++KKW+ D K+ V++ DP TS + + +FG + EK+E LI+ YL N + ++ ++++ AKYM S+ PGEPVG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILM AS +IKTP + + +KL+ R L+DVLE++ V EK+ +F S IR +FLP YK+D+ + P +L YVE+ F +++ + L KK ++ E+ K S + + D D+ D K +GF E H SSDEEE+ DD DAT+ K NR ++ E +E++ ND + S+ ++E+ ++ E + DIP I+ + SE K + KN ++ T I +Y D KE W E+ +G P+ K+DFS ++K K V+Y+I N+ +A++ K+ + E + T+G+N MF+F ++DINRL N ++ + GIEA R I E+ +VF YGIT++HRHL L+ADYMT G+Y PFNR+G+ ++ SPLQQM+FE + GFL+ + ++ ++D + SPS+ I+ G+ GT F +M SI
Sbjct: 7 EINKIIFGIFNASDIYNLSVVEIKTSICFNALDHPLKDGLYDLVMGPSGMLKESCLTCRQTIRNCCGHFGHINLPLPVINPLFHKEVLTLLKLSCSYCYKLAIPPNLRNLFIYQMKLLDHGKMAEAED----LETKALNLKEMD----SNDAQNYVVKENYSEYLKELELDSN--PVNIPSSRSIESLRLKFLNEFIKQIILPKSCTHCKNPFKRIIKFQNKIISSITKVEIAKKFKDVPQNAFNKGSKQETTFITPKESRETLRKIWEESKDLVEELMPILKN-SNLSYPTDLFFMDVILVTPPKARPVEFAN-------------------------VKAVDTGDYNSFPPEYKVYIDGIRGATVLEKLHECWLQLQNDIDTLLDSSAARISLKKGISGLKQVLEKKEGVLRMHMMGKRVNFAARTVITPDPNLNIQEIGVPEYFAKKLTYPVGVNFFNVEELRKMVQNGPDVYPGATLIENENGSLIKLTGGEENRKKRIGISKLLLKSIEGDPTSFKTKKVHRHLLNGDIVLLNRQPTLHRPSIMAHIVKILKNEKTFRLHYSNCKAYNADFDGDEMNLHLPQTELSRSEGYNIVNVANHYLVPKDGTPLGGLIQDHIVSTVRLTMKNQMFEKEDYHQLVYQGLSHKNGNIILLPPCIVKPKKLWSGKQIISTILINIIPKDKDLISFNGNAKISVKLWETGSPRKW----MCGEEFKSDNEMSESSIILRKGILVTGVLDKQHFGATPFGLTHCLYELYGGECSSKFLNSIGRLSTAFLQMTGFTLGVEDILVKAKADKSRKKIIEKLRKCGDEIAAKALGLEEIPNDL---YERLEREYFKNRTMFKGKLDQEYKVKLNSFTNEINKVCLPKGLISRFPENNLQLMVTSGAKGSTVNTMQISCLLGQIELEGKRPPFMISGKSLPSYKAFDTQPCAGGYIDNRFMTGISPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGVSIGYDGTVRDHDGTVIQFIYGGDGLEVQKSTFFKPTHMEFLHNNLNAVVKKSVIE---------SLKADVPYKKIEAYREEVMAGINLSKKVLAPFT-SFSQSIKNDIRNKYFTKLDKRTGRTKAYSKMLKKWNALADEDKQLYKQEVRL-DPVTSKYNRNHDFGVITEKLETLIKDYLDAKCSNQSKKEKKKVKNMVEAKYMLSLCQPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMTASKSIKTPYVDVPLKKKSEKKMLKNGNKLKKIFQRVTLADVLETITVHEKV-IFKPSPLFTYTIRFKFLPHSFYKDDYLIKPKDVLEYVEKPF---LILLCKEIRKLSKKFGDIIFESKEEKMISKEDEEKDDADNVDSAGVNFNKYRGF-GENHESSDEEEELDDDDATKEKVRNRHCENQEYDEPEESEEEKSDEENDTLYQDEPSEYEEETERRVELGEEESESRDIPEINLT---SEELKNVENRKNFVLN--TFPMIKKYDFDVVKEEWCEMVVGIPLTLNKIDFSTILKVICGKSVLYQIPNVRRAFVYKNPSGELHLKTEGVNFNEMFKFYKMIDINRLYSNDVNKVVETLGIEAGVRIIVKELNDVFGVYGITVDHRHLLLVADYMTNQGNYSPFNRIGLADSSSPLQQMSFERSTGFLKKSLVRNQEDFMNSPSARIMAGRFCKSGTGCFDVMTLPSI 1659
BLAST of EMLSAG00000006751 vs. Select Arthropod Genomes
Match: gb|EEC00840.1| (DNA-directed RNA polymerase I largest subunit, putative, partial [Ixodes scapularis]) HSP 1 Score: 1187.17 bits (3070), Expect = 0.000e+0 Identity = 687/1659 (41.41%), Postives = 960/1659 (57.87%), Query Frame = 0
Query: 17 ALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSL---KKKCGECGGYTKKISLYQ-SRFIYEGEDEDA-----------------SKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETV----TIMKQIVQNINEESSEDLSSEAQEMLRTIR-------GDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGED--KMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTE-GFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLG--SLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSD--ELNELKSKIRKKRKKVRGMK----CRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNN---------KSDKG------------EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHV-LESEKDKLRIKLNRCALSDVLESVHVTEKISLFGS-SRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDAT--LLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDD---------DYDEGLSDEETQM-----LNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFH--ILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEET----TITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTIT 1586
+SF +FS++E+ LS + +T +F+ +GHP +GGL+D +GP SDR C+TC L F CPGH GHI LPL NPLF++ L L+R SC C +L L L Q ++L G + Q+ L T DE+ + + +++ + ++++++ + +NV R+ IK F L +KC CG + +++ +RF+Y G + + +T L P E ++HLR W +S +L+ ++ L S +HP D+FFL + PP + RP + HPQ SL +++ ++K + +N + ESSED + + T R G + KL+ W LQ V+ ++D E++ N + G KQ++E+K GLFR HMMGKRVN+AAR+VI+PDPYI +DEIG+P VFA +LSY PVT NV ELR+ VINGPNV+PGAL +E G +D + ++REA+AK L+TPS + K V+RHL GD +LLNRQPTLHKPSIM+H+ARVL GEK +RLHYA CK YNADFDGDEMNAHFPQ+E+AR+EA + V+ QYLVPKDGTPL GLIQDHVIAG ++++GRFF++ +Y QLVY AL V IK LPPAI KP+ LW+GKQ++ST+++N IP + + T+ K KI + WL R GS + + M E +V+ +GEL+CGV+DK YG T + LVH YELYGG SS +L+AF+R+FT+FL T GFTLG+ DILV A++ R++IMK + GD A + + ++ L LR H K++ D K + N+IN AC+P GL+KKFPENNLQLMVQ+GAKG VN MQISCLLGQIELEG+R P+M+SGR+LPSFLPYDT PRAGGF+DGRF+TGI+PQEFFFHCMAGREGL+DTAVKTSRSGYLQRCLIK LEGL+V YD TVRDSDGS FQYGED LDV K Q + P+Q L N +++++ L E C + +D EL+ K ++K +KK G + R+ AF FS +P TGR L++ + + S K V+ DP SV R D N G+++E+++ L++ Y+ N +S G + FR+++Y + ++S+ DPGEPVG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPR+REILMVAS+NI TP+ +H LP E D+LR+ + L+ VLE V V E++ + G R R ++ QFLPRKAY+ TP IL Y+E F + L++A L++ + G S + +N+ +D D + D ++ +E D D + +R D + LSDEE L K EN ++ED + + +E L K + + QK K + TSF+ + Y D +E W T ++ K DF+++++ + K V + + I++A+L KD + + + T+G+N MF+ D++D+ R+ N IH +A +GIEAA I
Sbjct: 13 GVSFNVFSTDELLRLSVLSVTCSETFDIVGHPTKGGLHDSLLGP-SDRDEVCATCGLGFVACPGHIGHISLPLLTFNPLFFRTLYQLLRGSCFGCARLLSPPAVCQLTLAQLQVLQYGAVGAVQELQELAAEAIT--DEKG--KASRSVMGLALKKRIDERVKSIMEGRA------NVKNVVECRQRLIKTFVREHLMGAPRKCPHCGDVRRGMTIQNNARFVYTGRAQGMDIPEEEEEVPVKEESVDTGAQTYLTPLEARKHLRLLWQNESPLLRHLFGALGSDSQ-KHPVDMFFLEALVVPPTRFRPMNFMHGRKYEHPQTVSLSKVLQCCDAARAVLKLMERNQDSESSEDTMEMQRLQVCTFRQVVDKLPGKDLSSKLHVAWNNLQVAVNVVVDSELDRLSSNKATPGIKQILEKKEGLFRKHMMGKRVNYAARSVISPDPYIGVDEIGVPMVFATRLSYPEPVTDRNVSELRKAVINGPNVYPGALLVEHGDGTVTRLDPTNRVRREAIAKQLMTPSDSFKNTLARCKTVHRHLRTGDMLLLNRQPTLHKPSIMAHQARVLPGEKTLRLHYANCKCYNADFDGDEMNAHFPQSELARAEASQVATVNRQYLVPKDGTPLSGLIQDHVIAGSLLTMQGRFFNREDYNQLVYGALTFVPSSIKVLPPAIQKPETLWTGKQVLSTVLINCIPRNKPAPTVEGKAKIPAKAWL----------RPGSEANEAEAQMSEGQVVIRDGELLCGVLDKAHYGPTQFGLVHVCYELYGGAISSLVLTAFARLFTHFLQTHVGFTLGIEDILVTLKADKKRKKIMKMARKEGDGAAKKALGIEEDIAPEDLMESLRGAHLSRNDRYLKQL--DASMKSVTDDVNNQINKACIPDGLLKKFPENNLQLMVQSGAKGGMVNCMQISCLLGQIELEGRRVPLMLSGRTLPSFLPYDTSPRAGGFVDGRFLTGIRPQEFFFHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEGLMVGYDQTVRDSDGS---FQYGEDGLDVLKMQMLKPSQFPVLIKNAEALLDSKEL----EQCQSFTDHEELHSAKKAVKKWKKKTDGRQEEKERRENAFTFFSSREGGEYRRLYPGTNPDTGRQLHCEKLVEAFQALEHKSLKKLNKAIVKPADPVCSVVRNDLNLGAISERLDALVEDYISKNPHRLLVDPKRSPDGSVTERERKVLSPDDFRNVVYLRNLRSICDPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRMREILMVASANIATPTMDLHLLPAADAEQRADRLRVLITAVNLAQVLEEVTVRERLVVKGRMERFREYRVHFQFLPRKAYRKTLHATPQRILRYMETTFLRR----LVEAVKRKLEQVKSAKAGGSSASNNDQGNDAAFDEGSGAARNAA-DVDDDGGGSSDEGEGDGDTVAQQAQSRHAQDREYEEAEEEELPAALSDEEVDGGEEGNLATVPKLEN-AEEDGAADDEGDEPRLASLK-------KGAHKVKHQKASRTAKEARVFAVTSFNQWVTGYDYDVDQEEWCCYTFRLSLEGSKFDFTSVVEEESAKAVFHSVPGISRAFLVKDTKDRSGCGKMLQTEGVNFVEMFRHGDIVDMRRIYSNDIHAIANTFGIEAARTAIA 1627
BLAST of EMLSAG00000006751 vs. Select Arthropod Genomes
Match: AAF58234.1 (RNA polymerase I subunit [Drosophila melanogaster]) HSP 1 Score: 1176.77 bits (3043), Expect = 0.000e+0 Identity = 640/1347 (47.51%), Postives = 871/1347 (64.66%), Query Frame = 0
Query: 11 VHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIYE----------GEDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLK-DCSDMEH----PTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESY-KAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMA-FLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRD-----GAFLRFSRD-NSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDAT 1333
VH L F +F+ +EIR LS +++ +F+ LGH + GGLYD+RMG Y C TCL + CPGH GHIEL PV NP F K + L+ C+ C+KL + + ++Q +L+D G I+E+Q+ L + + E++ + +V + + +L+ N+K S ++ST+ +LR T I L KKC C + + R ++ G + + +E +R+LR+ + +LK + P+L +D+ P D+FF++ + PP++RP G ++ +PQ ++E ++ +++ + + E L+ EA+ +T++G+T KL W LQ VD LLD +N S++ SG G KQ+IE+K+GL R HMMGKRVN+AARTVITPDP IN+DEIG+P++FAKKLSY VPVT WNV ELR++V+NGP+VHPGA +I+ ++G I ++ +RE+LAK LL S+P +D +K V+RH++NGD +LLNRQP+LHKPSIM H+AR+L GEK RLHY+ CK+YNADFDGDEMNAH+PQ+EVAR+EA NLV V+ YLVPKDGTPL GLIQDHVI+GVK+SIRGRFF++ +YQQLV+ L +K IK LPP I KP LWSGKQI+STII+N IP G E + L S KI +W PRP G++ +G + ES+V NGEL+ GV+DK QYGAT Y L+H YELYGG S+ LL+AF+++FT FL EGFTLGV DILV A+ R +I+++ +N+G+ + + L + EL +Y K + R+ +D+ YK L TN INS CLPRGLI KFP NNLQLMV +GAKGS VNTMQISCLLGQIELEGKRPP+MISG+SLPSF ++T P++GGFIDGRFMTGI+PQ+FFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGL V+YDLTVRDSD SVVQF YGED LD+ KS++ A FL N +++ P+ L+L M + ++L +K+++ K +R + + AF FS + E + N+I+ KTGR L+K W + D + + ++KKY + PDP +V++ D +GSV+E+ LI Y K + K E DIM K +KS+ PGEPVG++A QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILM+ASSNIKTPS I P + + +KLRI LN L+++LE VHV+ ++L R +R QFLPR+ YK D+ V P I+ Y+ + FF +++ ++ +
Sbjct: 9 VHMFPSDLEFAVFTDQEIRKLSVVKVITGITFDALGHAIPGGLYDIRMGSYGRCMDPCGTCL-KLQDCPGHMGHIELGTPVYNPFFIKFVQRLLCIFCLHCYKLQMKDHECEIIMLQLRLIDAGYIIEAQELE-LFKSEIVCQNTENLVAI----KNGDMVHPHIAAMYKLLEKNEKNS-SNSTKTSCSLR-TAITHSALQRLGKKCRHCNKSMRFVRYMHRRLVFYVTLADIKERVGTGAETGGQNKVIFADECRRYLRQIYANYPELLKLLVPVLGLSNTDLTQGDRSPVDLFFMDTLPVTPPRARPLNMVGDMLKGNPQTDIYINIIENNHVLNVVLKYM-KGGQEKLTEEAKAAYQTLKGETAHEKLYTAWLALQMSVDVLLD--VNMSREMKSGEGLKQIIEKKSGLIRSHMMGKRVNYAARTVITPDPNINVDEIGIPDIFAKKLSYPVPVTEWNVTELRKMVMNGPDVHPGANYIQDKNGFTTYIPADNASKRESLAKLLL---SNP-KDGIKIVHRHVLNGDVLLLNRQPSLHKPSIMGHKARILHGEKTFRLHYSNCKAYNADFDGDEMNAHYPQSEVARAEAYNLVNVASNYLVPKDGTPLGGLIQDHVISGVKLSIRGRFFNREDYQQLVFQGLSQLKKDIKLLPPTILKPAVLWSGKQILSTIIINIIPEGYERINLDSFAKIAGKNWNVSRPRP---PICGTNP--EGNDLSESQVQIRNGELLVGVLDKQQYGATTYGLIHCMYELYGGDVSTLLLTAFTKVFTFFLQLEGFTLGVKDILVTDVADRKRRKIIRECRNVGNSAVAAALELEDE--PPHDELVEKMEAAYVKDSKFRVLLDRKYKSLLDGYTNDINSTCLPRGLITKFPSNNLQLMVLSGAKGSMVNTMQISCLLGQIELEGKRPPLMISGKSLPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLSVHYDLTVRDSDNSVVQFLYGEDGLDILKSKFFNDKFCADFLTQNATAILRPAQLQL-----MKDEEQL----AKVQRHEKHIRSWEKKKPAKLRAAFTHFSEELREEVEVKRPNEINSKTGRRRFDEGLLKLWKKADAEDKALYRKKYARCPDPTVAVYKQDLYYGSVSERTRKLITDYAKRKPALK-ETIADIMRVKTIKSLAAPGEPVGLIAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMLASSNIKTPSMDIPIKPGQ-QHQAEKLRINLNSVTLANLLEYVHVSTGLTL-DPERSYEYDMRFQFLPREVYKEDYGVRPKHIIKYMHQTFFKQLIRAILKVS 1321
BLAST of EMLSAG00000006751 vs. Select Arthropod Genomes
Match: gb|KPM03307.1| (DNA-directed RNA polymerase I subunit RPA1-like protein [Sarcoptes scabiei]) HSP 1 Score: 1010.75 bits (2612), Expect = 0.000e+0 Identity = 587/1436 (40.88%), Postives = 833/1436 (58.01%), Query Frame = 0
Query: 17 ALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDE------ESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEAL--------RKTCIKDFFNVSLKKK---CGECGGYTKKISLYQSRFI-----------YEGEDEDAS------KNKTELNPEELQRHLRETWLKDSNILKFMYPMLK---DCSDMEH-PTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSS--DPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFL-HTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRK-----KRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKW-SEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVE----DLIQSYLKNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHV------LESEKDKLRIKLNRCALSDVLESVHVTEKISLFG---SSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVET-GTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEE------HASSDEEEQP 1385
+ F +FSS EI LS + +TN +F+ LGHP++ L D + C GHFGHI+LPLPV NP K++ +++ C C L + +F+ Q + L+LGL + + S+ E + + ND +I +++ +LQN+ + VEA+ ++ K+FFN + K CG C + +++ I +E E +DAS K K+ L P + LR+ W + ++LK ++P LK D D E+ P D+FF + P + RP ++ HPQ ++L E + I K + ++ + SS + + R ++ W+ LQ + + D M+ N S G KQ++E+K GL R +MMGKRVNFAAR+VI+PDPYI DEIG+P +FA KLSY V WN+++L++++INGPN HPGAL I G + +D QR +LA TL T SS + D + V RHLI GD +L+NRQPTLHKPSIM+HRARVL EK +RLHYA CK YNADFDGDEMNAHFPQ+E+AR+EA N+ V+ Q+LVPKDG+PL GLIQDH++AGV ++ RGRFF++ +YQ+L+Y +L + KI LPPAI+KP++LWSGKQIIST++ N IP + + +++KI S + + P P R + K MC+S+VIF NGEL+ G++DK GA L+H YELYG S+LL+A +R+ TNFL + GFTLG+ DILV+ R +++K K IG T S+ + + + + + K ++D YK + ++N I C+P+GL+K FP+NNLQ+M+Q GAKG +VN +QISCLLGQIELEG+R P+M+SGR+LPSF PY+ +PRAGGF+ GRF++GI+PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGLVVNYDLTVRDS+GSV+Q+ YGED LDV KSQ + + + N K ++ P ++ N + LK K +K + + K R F F S H ++P+ + + L+K W + D + + F ++ DP S FRPD N G+++E++E I S LK + E F+ I+ Y++S+ PGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLG+PRLRE+LM ASSNI TPS I F + +E + + +R+++N + D+LE V ++E I + + RI IR FLPR YK+ +P+ IL + ER F K + ++++L+++T G +K+ N + + S+KQ+ + D EE A D EE+P
Sbjct: 10 GIQFKLFSSNEIEKLSVLPVTNIQTFDPLGHPLENSLADTALDAE----------------CLGHFGHIKLPLPVFNPFLMKQIFQILKMFCFDCQHLLLTPFNVEIFIAQIQALNLGLDYDLDKIRDYASEISNSVKGFDWGSIEGRTYLRGKLND-LIWKEI--NLQNIAREEINKKIISDDELVEAVNSKNIVEKKQNLFKNFFNCKIIKPTRVCGNCNARKRSLNVINKSLIVISGMNTDSKIFEYEVDDASAKSIDMKGKSYLTPLRARDLLRKFWFNEKDVLKKLFPFLKIEDDNDDSENCPMDVFFWEKLVVTPNRFRPLRHLNGRSFEHPQTSALS---EIMLIAKSLEYSLEQAKK---SSSGESIAR----------FHHQWQRLQILCNRVYDSSMDNLPDNKS-VGVKQILEKKEGLMRKNMMGKRVNFAARSVISPDPYIMTDEIGIPLIFATKLSYPQTVADWNIKQLKQMIINGPNKHPGALSITYGDGYTVRLKPDDINQRMSLAATLHTHSSGNNRDSDGITIVNRHLITGDVLLVNRQPTLHKPSIMAHRARVLPKEKTLRLHYANCKCYNADFDGDEMNAHFPQSELARAEAYNIASVNNQFLVPKDGSPLSGLIQDHIVAGVLLTTRGRFFNKNDYQELIYGSLSFLNCKIDYLPPAIYKPERLWSGKQIISTLLRNIIPKHKLLPSFENESKISSKLLITEKPNPKSGER---KEILKEKEMCDSQVIFRNGELLSGIMDKVNLGANKNGLIHVCYELYGDDIHSKLLTAIARLCTNFLQYHHGFTLGIHDILVKPKPESKRRKLIKASKTIGRNAVTETFSMQTDSEEILIKEKLQTAQISKNNSLMKQLDASYKSQTDSLSNEITEHCMPKGLLKPFPQNNLQMMIQTGAKGGSVNAIQISCLLGQIELEGRRIPLMMSGRTLPSFRPYEIEPRAGGFVTGRFLSGIRPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVVNYDLTVRDSEGSVIQWLYGEDGLDVLKSQSLKKSFFPTILSN-KEILRPMRNEIEKLKLAQNPGLMKHLK-KTQKYIENVGKNAIEKNKERSSPFALF------VSQH--KNLNPELTK----DHLLKIWFNLDCNERKKFSSSIIRSLDPIISKFRPDRNLGAISEELESDIKQFIDSNLKGASRNSVEDFKQILNQCYIRSLCSPGEAVGLLAAQSIGEPSTQMTLNTFHFAGKGEMNVTLGVPRLRELLMTASSNISTPSMDIPFKNDLSIDIEEIEKQAENVRLRMNAVRMKDILEYVDISEHIEIKSDGFQEKSRIYTIRFIFLPRSYYKHRAFTSPAKILQFFERKFLKKFI------ESINRRLLIKTYGLFDTKTQTNRNHR----SNKQKTKIEADEEELINQNNDADDDLEEKP 1382
BLAST of EMLSAG00000006751 vs. Select Arthropod Genomes
Match: gb|KFM65263.1| (DNA-directed RNA polymerase I subunit RPA1, partial [Stegodyphus mimosarum]) HSP 1 Score: 936.791 bits (2420), Expect = 0.000e+0 Identity = 509/1095 (46.48%), Postives = 706/1095 (64.47%), Query Frame = 0
Query: 216 KCGECGGYTKKISLYQSRFI-YEG----EDEDASKNKTELNPEELQRHLRETWLKDSNILKFMYPML-KDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMK--QIVQNINEESSE-DLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLH-TEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKV-DKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTG----RSFRTNFLIKKWSEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSD-------------KGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHV-LESEKDKLRIKLNRCALSDVLESVHVTEKISL 1281
KC C KK++LY++R + EG E E NK E+ PE+ + H+ W +IL+ +Y +L ++ DIFFL+ + PP + RP ++ + + + Q ++ I+ +++QNI + D+ + ++ I G + K NYV++ LQ V L D E S++N S G KQ++E+K GLFRM+MMGKRVN+AAR+VI+PDPYI ++EIG+P VFAKKL++ P + WN E+LR+ V NGP+++PGA I+ E G+ + G DP QREAL+K LLT + +K V+RH+ +GD +LLNRQPTLHKPSIM+H+ARVL GEK +RLHYA CK+YNADFDGDEMNAH PQ ++E +++V V+ QYLVPKDGTPL GLIQDH+IAG +++RGRFFD+ +Y++L+YSAL + ++K LPP I+KP+ LWSGKQ++S+II+N IP + TL K K+ S +W+ + R WK + G +M ESEVI +GEL+CGVIDK Q G T YSL+H YELYGG SS +L+A +R+FT++L GFTLG+ DI++ A++ R +++K+ K G ++ + + ++ L ++ + +KV D K+ + N+IN+ C+P GL KFP NNLQLMV++GAKGS+VN MQISCLLGQIELEG+R P+M++G +LPSF YDT P AGGF+ GRF++ I PQE+FFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEG+ VNYDLTVRDSDGS+VQF YGED +DV K Q + NQ L N ++IN LK++ + RK + + + + S SS+ INKI+ + L +K + D+ + FK+K+ + PDP +S F+PD FGSV EK++ I Y+ N E+F+D+ Y + MKS+ +PGE VG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPR+REILM AS+NI TP+ + L +E E + LR++L +L ++LE++ V E IS+
Sbjct: 7 KCPHCRTPRKKMALYKTRIVCTEGRVKLESEKDRGNK-EITPEKARDHMYILWKNQKDILQCLYKILVQEEKKQNVAVDIFFLSSIIVPPSRFRP------LIVMKGKKYADQQTLKFKDILSDCKLIQNIWRFAKNVDIDENEKALINKIPGKSEGDKFNYVYQSLQRHVAELFDCEQ--SKENFSK-GIKQILEKKEGLFRMNMMGKRVNYAARSVISPDPYIKVNEIGIPLVFAKKLTFPEPASQWNFEKLRQAVKNGPDIYPGASLIQKEDGKIVKLTG-DPTQREALSKLLLTQQGNV-IGGVKIVHRHIQDGDMLLLNRQPTLHKPSIMAHKARVLPGEKTLRLHYANCKAYNADFDGDEMNAHLPQTYGGQAECRHIVNVNHQYLVPKDGTPLSGLIQDHIIAGTLLTMRGRFFDRNDYEKLIYSALTFTRKRLKLLPPCIWKPEVLWSGKQVVSSIIINLIPEDKLPPTLEGKAKVSSKNWVREPVREWK----AGGTPLSGDNMSESEVIIRSGELLCGVIDKAQIGPTPYSLIHVCYELYGGEISSVILTALARLFTHYLQFCSGFTLGIKDIVLTPKADKKRRKVLKKTKAKGLIACSNALEVENPEENIEELLTKYKETHFNRDDFGLKVVDMEMKKVTHELNNKINTICIPEGLKSKFPLNNLQLMVESGAKGSSVNAMQISCLLGQIELEGRRMPLMLNGCTLPSFPAYDTSPEAGGFVTGRFLSSINPQEYFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGVTVNYDLTVRDSDGSIVQFLYGEDGMDVGKMQLLKENQFHLLAKNYDALINKEHLKMLLD----------------RKDSRMEKQKRKVKKWQKKHSSSEPRSSL--INKIEIAPAFSDLKKRVKRILNEKENIDEYVKKKFKRKHGRCPDPVSSKFKPDVTFGSVTEKLDSAISDYIARNPHGLLHYDTEDISGKLSTEKFQDLCYYRAMKSLAEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGKGEMNVTLGIPRIREILMTASANIATPTMDLPLLDKPGIEEEAENLRLQLAPVSLKEILEAIEVKEYISV 1067
BLAST of EMLSAG00000006751 vs. Select Arthropod Genomes
Match: gb|EEC06675.1| (DNA-directed RNA polymerase II largest subunit, putative, partial [Ixodes scapularis]) HSP 1 Score: 447.588 bits (1150), Expect = 1.256e-128 Identity = 381/1299 (29.33%), Postives = 591/1299 (45.50%), Query Frame = 0
Query: 14 EAGALSFGMFS-SEEIRNLSAME--ITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIYEGE--DEDASKNKTELNPEELQRHLRETWLKDSNIL----KFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSE--DLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREM----NASQKNSSGW-GFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTN--RINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMN---NSDELNELK------SKIRKKRKKVRGMKCRDGAFLR--FSRDNSESSMH-DINKIDPKTGRSFRTNFLIKKWSEDDDSQ-------NHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDK--GEQFR----------DIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNR 1263
E + FG+ S +EIR +S + I P + + G P GGL D R G DR C TC CPGHFGHIEL PV + F + + ++R C C K L+ +P +E +++T + + L V D K ++ ++ + + K+ G CG Y I E + +ED+ + K L E + R+ ++ IL +F P D + V+ PP RP +M +N ++ + + D+ E++R + + K+LQ V L+D EM A QK+ KQ ++ K G R ++MGKRV+F+ARTVITPDP + IDE+G+P A+ L++ VTP+N++++ ELV G N +PGA +I ++G+R + +SD V RH+ NGD ++ NRQPTLHK S+M HR +VL R++ +V YNADFDGDEMN H PQ+ R+E + L V Q + P+ P+ G++QD + A KM+ R F ++ + ++ I GK+ PAI KPK LW+GKQI S II PG +V L +T D + P W S +++V+ +GEL+ G++ K GA+ SL+H + G + + +L EG T+G+ D + ++ +KN ++ + + + + H + + P + + ++ ++ + N R + + + +F NN + MV +GAKGS +N Q+ +GQ +EGKR P R+LP F+ D P + GF++ ++ G+ P EFFFH M GREGLIDTAVKT+ +GY+QR LIK +E +++ YD TVR+S+ V+Q +YGED LD + P + ++ K+ + S L + + D + EL S++ K+ ++++ RD LR F +S+ + ++ ++ + FR N S D S KK V VP D E L +S L+ K E+FR + ++ +S PGE VG LA QS+GEP+TQMTLNTFH+AG NVTLG+PRL+EI+ + S KTPS + FL + +K + L R
Sbjct: 17 EVKRVQFGILSKPDEIRRMSVTDGGIKYPEIY-EGGRPKLGGLMDPRQG-VIDRTSRCQTCAGSMTECPGHFGHIELAKPVFHCGFLTKTIKILRCVCFYCSK-------------------------------LLVSPNNPKIKEIVAKTRGQPRKQ---------LSFVYDLCKGKNICEGGDEIDTKMGVENQGAEEAAKKQGHGGCGRYQPSIRRSGLDLTAEWKHVNEDSQEKKVVLTAERVWEIFRQVSEEECQILGMDPRFTKP------------DWMLITVLPVPPLAVRPA-----------------------VVMFGSARNQDDLTHKLADIVKANNELIRNEQSGAAAHIIAETLKMLQFHVATLVDNEMPGLPRAMQKSGRPLKSIKQRLKSKEGRIRGNLMGKRVDFSARTVITPDPNLRIDEVGVPRSIAQNLTFPEIVTPFNMDKMHELVRRGNNQYPGAKYIIRDNGER-------------IDLRFHPKASDLHLQCGYRVERHVRNGDIIVFNRQPTLHKMSMMGHRIKVLPWS-TFRMNLSVTTPYNADFDGDEMNLHVPQSLETRAEVEQLAMVPRQIITPQSNKPVMGIVQDTLTAVRKMTKRDIFLEKDQMMTILMFLPI-WDGKMPM--PAILKPKPLWTGKQIFSLII-----PG--NVNLI-RTHSTHPDEEDDGPYKW-------------ISPGDTKVLIEHGELISGIVCKKTVGASSGSLMHVVFNELGHQVAGLFYGHIQTVVNAWLLLEGHTIGIGDTIAD-------KQTFIDIKNTIEKAKHDVIDV----------IEKAHNDELE-PSPGNTLRQTFENQVNRILNDARDKTGASAQKSLSEF--NNFKAMVVSGAKGSKINISQVIACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMIAYDGTVRNSNSQVIQLRYGEDGLDGVA---VDPFGGSLIWSQPKATLRLSVPSLRAPRYLRKVFTEDVVRELMGSATAVSELEKEWERLK----RDREALRTIFPTGDSKVVLPCNLQRMLWNAQKIFRVNLR----SPTDLSPLRVVQGVEELVKKLVIVPG-------EDHLSIQANENATLLFRSLLRATLCSKRVAEEFRLSTESFEWLLGEIETRFHQSQGQPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINI-SKKPKTPSLTV-FLTGAAARDAEKAKDVLCR 1160 HSP 2 Score: 60.4622 bits (145), Expect = 7.370e-8 Identity = 43/143 (30.07%), Postives = 66/143 (46.15%), Query Frame = 0
Query: 1539 ETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGI-ENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIM 1680
E + TDG ++ + D+ D R N I ++ GIEA + + E+ +V G +N+RHL L+ D MT G R GI + L + +FE + L A + D L+ S II+G+ GT F +M
Sbjct: 1333 EWLLETDGTSLMRVLSERDV-DPVRTYSNDICEIFAVLGIEAVRKAVEKEMNHVISFDGSYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAEVDYLKGVSENIIMGQLARMGTGCFDLM 1474
BLAST of EMLSAG00000006751 vs. Select Arthropod Genomes
Match: XP_016772875.1 (PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Apis mellifera]) HSP 1 Score: 440.269 bits (1131), Expect = 2.365e-126 Identity = 382/1296 (29.48%), Postives = 596/1296 (45.99%), Query Frame = 0
Query: 18 LSFGMFSSEEIRNLSAME--ITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIYEGE----DEDASKNKTELNPEELQRHLRETWLKDSNIL----KFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSE--DLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREM----NASQKNSSGW-GFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVY---RHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKK--FPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSL--DVCKSQYIVPNQMAFLYDNMKSVINPST----LKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESS----------MHDINKIDPKTGRSFRTNFLIKKWSEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDK--GEQFR----------DIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNR 1263
+ FG+ S +EIR +S + I P + + G P GGL D R G DR C TC CPGHFGHI+L PV + F + + ++R C C KL S K+ ++ + + Q L T + + S+ E DE+ + K Q++ +KP H G CG Y + +L +S E +ED+ + K L E L+ ++S IL KF P D + V+ PP RP IM +N ++ + + D+ E++R + ++ K+LQ V L+D +M A QK+ K ++ K G R ++MGKRV+F+ARTVITPDP + ID++G+P A+ L++ VTP+N+++++ELV G + +PGA +I ++G+R ID L P + ++ Y RH+ +GD ++ NRQPTLHK S+M HR +VL R++ + YNADFDGDEMN H PQ+ R+E +N+ Q + P+ P+ G++QD + A KM+ R F ++ + ++ L + GK+ P I KPK LW+GKQI S II PG ++ +T D + P W S +++V+ +GELV G++ K G + SL+H G + N+L EG ++G+ D + + EI K +K ++ V A+ L R++++ R+ D +++ G G KK NNL+ MV +G+KGS +N Q+ +GQ +EGKR P R+LP F+ D P + GF++ ++ G+ P EF+FH M GREGLIDTAVKT+ +GY+QR LIK +E ++V+YD TVR+S G ++Q +YGED L + + Q + +++ K +P+ ++ +E + E+ S++ ++ +++ +D A LR + ES + ++ KI F I K + D S + + D C V D E L Q +++ K E+FR + ++ ++ V PGE VG LA QS+GEP+TQMTLNTFHFAG NVTLG+PRL+EI+ + S K PS + FL + +K + L R
Sbjct: 16 VQFGILSPDEIRRMSVTDGGIRFPETM-EGGRPKLGGLMDPRQG-VIDRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFITKTIKILRCVCFYCSKLLVSPHNP-------KIKEIVMKTKGQPRKRL-----TFVYDLCKSKNICEGGDEMDINKENQEQQSI---ERKPG--H-------------------------GGCGRY--QPNLRRSGLDVTAEWTHVNEDSQEKKMALTAERAWEILKHITDEESFILGMDPKFARP------------DWMVVTVLPVPPLSVRP-----------------------AVIMYGSAKNQDDLTHKLADIIKANNELIRNEQAGAAAHVISENIKMLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITPDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIVRDNGER--ID--------------LRFHPKPSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWS-TFRMNLSCTSPYNADFDGDEMNLHAPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFIEKEQMMNILM-FLPSWDGKMP--QPCILKPKPLWTGKQIFSLII-----PGNVNMI---RTHSTHPDEEDDGPYKW-------------ISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGRFYGNIQTVINNWLLLEGHSIGIGDTIADP---QTYLEIQKAIKKAKEDVIE--VIQKAHNMELEPTPGNTLRQTFENQVNRILNDA--RDKTG-------------GSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPTIKLSNKAFEKKFKFDPTNERYLRRIFNEDIVREMMGSGEVISELEREWEQLN----KDRAVLREIFPSGESKVVLPCNLQRMIWNVQKI-----------FHINKRAPTDLSPMKVIQGVKDLLDKCIIVAGDDRLSKQANENATLLFQCLVRSTLCTKCVSEEFRLSSEAFEWLIGEIETRFQQAQVSPGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINI-SKKPKAPSLTV-FLTGAAARDAEKAKNVLCR 1152
BLAST of EMLSAG00000006751 vs. nr
Match: gi|817050809|ref|XP_012257487.1| (PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Athalia rosae] >gi|817050811|ref|XP_012257577.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Athalia rosae] >gi|817050813|ref|XP_012257663.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Athalia rosae] >gi|817050815|ref|XP_012257740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Athalia rosae]) HSP 1 Score: 1497.26 bits (3875), Expect = 0.000e+0 Identity = 799/1707 (46.81%), Postives = 1113/1707 (65.20%), Query Frame = 0
Query: 9 NVVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNV--SLKK-----KCGECGGYTKKISLYQSRFIY-EGEDEDASK-----------NKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGE--DKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESY-KAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRG--MKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKW-SEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKS--DKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHF---LPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFD-AEEHASSDEEEQPDDADATEVKKMNR-QMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
+V H++ L+F MF++E+IRNLS +I+ P SFN LGHP++GGLYD +GP SDR C TC C GHFGHIELP+PVVNPLF+K+L TLIR SC+SC KL S K L + + KLL+ G I E ++ + + +S++EE G+E + M+++ N N + N + T I+ F + +LK+ C C K+ ++++ + + + + S+ N + P++ Q +LR+ WL ++++L+ + P L + + +EHPTDI FL +A PP RP Y M HPQ + +++ +++ I+Q I + ++ L E + + IRG++ KL+ W+ LQ VDH++DR+MN + +++S G KQ+IE+K G+ RMHMMGKRVNFAAR+VITPDP ++IDEIG+PE FA KL+Y VPVTPWNV ELR++++NGPNVHPGA+ +E E G K + + REA+AK LLT S G K V+RHL NGD +LLNRQPTLHKPSIM+H+AR+LKGEK +RLHYA CK+YNADFDGDEMNAHFPQNE+ARSE N+ VS QYLVPKDGTPL GLIQDH+++GV++++RG+FF + +Y QLVYSAL +V+G + LPPAI KPK LWSGKQI+ST+I+N+ P GR + L + KI W + PR WK +M E+EVI NGEL+CGV+DK YGAT Y L+H YELYGG SS+LLSAF ++F + L EGFTLG+ DIL+ +A + R + +K+ + IG+ +T +L + E++ ++SY + P+ + VD+ YK L TN IN CLP GL KKFP+NNLQLMVQ+GAKGSTVNTMQISCLLGQIELEGKRPP+MISG+SLP+F PYD PRAGGFIDGRFMTGI+PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGL V+YD TVRDSDGS++Q YGED LDV SQ++ Q+ FL DN +++ P L + + ++ ++ ++ KI+K KK K R F+ F ++S S + KI GRS L+KKW D++++ +K K PDP S + DSN+G + E+VE LI YL + +S DK +Q RDI+ K MKS+ PGEPVG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILM+AS NIKTPS I F LP LE DKLR+KL RC L++VL +V+V + L+ R + + +QFL RK+YK ++SV P +L+ E FF V + + L+ K ++ +D + + SD +++ D E H SSDE+E +DADAT + + R Q + +Y++ +E + +D +D++ DE E+ + +++ + DD+ +V RR V ++ + ++Y D+KK L ++ P+ KLD S +++T A K V++E I +A+ ++ ++ET + TDG+NI MF+++++L++NRL N I+ +++ YGIEAANR I E+ +VFK YGIT++ RHL LIADYMTFDG+++P +R G+EN+ SPLQQ++FE+++ F+++A +Q KKD+L SPSS ++LG+P GT F +M ++
Sbjct: 12 SVKHHDPQNLTFSMFTAEDIRNLSVTKISTPLSFNVLGHPLKGGLYDPALGPLSDRSDPCGTCGGNIVRCSGHFGHIELPVPVVNPLFHKQLWTLIRLSCLSCFKLQISSRMKLLLVAKIKLLEEGCIAELEELTQEIQHIISSMNEEE----GAEEFVRETIDAFMENMHNRQRFNHNVQLASQEDNATT-KNTNIQRFVYIDNTLKQFRAGNLCLYCQCAIPKVKSFRNKIMTTKSANLETSESIIQRGVVRRLNTVLIMPDQSQEYLRQLWLNEADLLRVIMPCL-NSTKIEHPTDIMFLKAIAVLPPLVRPVNYLQGQMIEHPQSQVYKSIIQDCLVLRNIIQTIQDGNTSQLPEEGRLVFDQIRGNSAVEKLHNAWEQLQTNVDHVMDRDMNKTTQSASCQGLKQVIEKKEGIIRMHMMGKRVNFAARSVITPDPNLSIDEIGIPEAFALKLTYPVPVTPWNVAELRKMILNGPNVHPGAVMVENEDGSVKRLCATGFVAREAIAKRLLTTSVKAGSFFRGTKIVHRHLQNGDVLLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNAHFPQNELARSEGYNIANVSNQYLVPKDGTPLSGLIQDHMVSGVRLTLRGKFFSREDYMQLVYSALTDVQGDLILLPPAIIKPKLLWSGKQILSTVIINATPRGRAKINLTASAKIGPKAWETRKPRRWKCGT----EFDDPKTMSEAEVIIRNGELLCGVLDKIHYGATPYGLIHCVYELYGGAHSSKLLSAFGKLFQSHLQREGFTLGIEDILILPNAGDKRTKFIKECRTIGE--STQKAALEVPDDTPIEEVKAQLQKSYLRNPKFQAIVDRKYKTALDVFTNDINKTCLPAGLFKKFPDNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPPLMISGKSLPAFAPYDPTPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLTVSYDSTVRDSDGSLIQLNYGEDGLDVPSSQFLKKEQLDFLVDNKNAILEPELLNGLRDL---STQKILKIGRKIQKWVKKHGSPLQKRRTSEFVEFCTEHSGSDVLKHRKIIESCGRSKGALILMKKWIKSDEETKLKYKDKCTHCPDPLFSRYTQDSNYGVLTERVEGLINDYLSSKRSPIDK-DQLRDILSLKVMKSLCQPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASQNIKTPSMEIPFKSQLPK-LEKRADKLRLKLTRCTLANVLTNVNVDGCLELWPQRRM-VYTLTMQFLRRKSYKREYSVQPIYVLTKTENSFFRDVFREIKKSAKASGALLHVGEDKKPVDDDQLDANESEISDANRRRGRLDLGETHESSDEDEPAEDADATTARSIARHQENQEYED--PEEASDESDDEIEDDDDDDEAAEAQNEEKQEKDEDEADDL----------DVANRRKKVIDMYPNA------IDYEFDKKKYLSCKLKFWLPLRMAKLDLSRILRTVAEKVVLWETPLIRRAFTFQNASDETILKTDGLNIVEMFKYNEILELNRLYSNDIYGISQTYGIEAANRVIVKEVKDVFKMYGITVDPRHLLLIADYMTFDGTFQPLSRKGMENSASPLQQISFESSLTFMKNAAVQNKKDDLSSPSSRLMLGQPCKSGTGLFTLMNRM 1682
BLAST of EMLSAG00000006751 vs. nr
Match: gi|954575712|ref|XP_014612250.1| (PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Polistes canadensis]) HSP 1 Score: 1479.15 bits (3828), Expect = 0.000e+0 Identity = 805/1724 (46.69%), Postives = 1101/1724 (63.86%), Query Frame = 0
Query: 12 HNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYN----DEVIVQKLMD-HLQNVLDSNKKPSVTHS------TRNVEALRKTCIKDFFN-VSLKKKCGECGGYTKKISLYQSRFIYEGEDEDASKNKTELN--------------PEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGE---DKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGS--LNSELRRFHRESYKA-PQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKC-RDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKG-----EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLP--HVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLV-VETGTSKSKSNNNID-------DKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNR-QMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQK--DDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
H + L+F +F++E+I LS M+I P SFN LGHP++GGLYD +GP + C+TC CPGHFGHIELP+P VNPLF+K L LI+ SC++C L K L + K+L++GL+ + SL+EE S T + D V +Q +++ +++N+++ K S T+N+ A R I ++ K C C KI++ +++ I + DA+ T + P++ + +LR+ W + + +K + P L + E+ TD+FF +V+ PP RP + M HPQ + +++ I++ I+Q I ++ L E + + I+G T KL+Y W++LQ VDHL+DRE+N + +++ G KQ+IE+K G+ RMHMMGKRVN+AARTVITPDP ++IDEIG+PE+FA KL+Y +PVTPWNV ELR+LV+NGPNVHPGA+ IE E G + + D +REA+AK LL PSSD +K V+RHL NGD +L+NRQPTLHK SIM+H+AR+LKGEK +RLHYA CKS+NADFDGDEMNAH+PQNE+ARSE + VS QYLVPKDGTPL GLIQDHVI+GV++++RG+FF++ +Y QLVY L+ KG +K LPP+I KP LWSGKQIIST+++N IPP + L S KI W R WK M E+EVI NGEL+CGV+DK YGAT Y LVH YELYGG+ SS+LLSAF ++F FL EGFTLG+ DILV A+ R+EI+ + + +G++ S + + A+ S L+S++ ESY A P+ R +VD+ YK L TN IN CLP GL+KKFP NNLQLMVQ+GAKGS VNTMQISCLLGQIELEGKRPP+MISG+SLPSF YD PRAGGFIDGRFMTGI+PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGLVVNYD TVRDSDGS++Q YGED LDV S ++ NQM FL DN +++P+ ++ + + N L +K + +K + R F FS +N + +ID +GRS T L++KW D++++ +KK+ V+ PDP S FR D+ FG ++E++E L+ Y+ N S + RD+++ K MKS+ PGEPVG+LA QS+GEPSTQMTLNTFH +G EMNVTLGIPRLREILM+AS IKTPS I F H L + +KLR KL +C L+DVLES+ + ++ R + + ++FLP K YK++F V P SI+ E+ FF K L I T L L+ VE + K NN D +D K ++ F E+H SSDEEE +DADAT + M+R Q + +Y+E D E ++ N EKD++ + + + NED + ++ DD + ++ A + QKRR +V KT + LEY D+ K LW P+ K+D +I+ AA K ++E NI KA+ + + ET + TDG+NI MF+++++LD++RL N I+ +++ YGIEAAN+ I E+ +VFK YGIT++ RHL+LIADYMTFDGS+KP +R G++++ SP QQM+FE+++ FLR+AT+QGKKD+L SPSS ++LG+P GT +F ++ K+
Sbjct: 13 HLDPKCLTFSVFTTEDIEKLSVMKIRTPLSFNILGHPLKGGLYDPALGPLLESSDPCATCGSTVYKCPGHFGHIELPMPTVNPLFHKALFLLIKLSCLNCFTLQIPTHIKMLLCAKLKILEMGLLSDID-----------SLEEEINSVTSKSQDIPESDLVYIQDIIETYIRNLINKTKYIPNAQSNRTVLNTKNINAQRHMYIDSILKKYTVGKICINCQEAIPKITVLKNK-IMTTKTSDANFTSTNMMSSMVVHKLETVIIMPDQSKEYLRKLWQNEEDFIKIIIPCLNNVK-AEYATDVFFYDVIPVLPPIVRPINFLHGQMIEHPQSQVYKSIIQDCLILRNIIQYIQNGNTNQLPEEGKMVFDQIKGSTAVEKLHYAWQMLQTNVDHLMDRELNRTPDSANCLGLKQVIEKKEGIIRMHMMGKRVNYAARTVITPDPNLDIDEIGVPEIFALKLTYPIPVTPWNVLELRKLVLNGPNVHPGAVIIENEDGSVQRLSPIDATKREAVAKRLL-PSSDKANRFFKGIKVVHRHLQNGDILLINRQPTLHKSSIMAHKARILKGEKTLRLHYANCKSFNADFDGDEMNAHYPQNELARSEGYFIANVSNQYLVPKDGTPLSGLIQDHVISGVRLTMRGQFFNRTDYMQLVYCGLVGHKGDLKLLPPSILKPIPLWSGKQIISTVLINIIPPNTARINLNSTAKINVKQWQTNKARQWKCGT----EFTSPEQMSEAEVIIRNGELLCGVLDKMHYGATPYGLVHCVYELYGGSYSSKLLSAFGKLFQAFLQREGFTLGIEDILVVPKADMKRKEIISESRTLGEDIQKSLLEMPADTPSDVLSSKIE----ESYWAEPKFRTQVDRKYKHVLDVYTNNINKTCLPAGLLKKFPHNNLQLMVQSGAKGSMVNTMQISCLLGQIELEGKRPPLMISGKSLPSFPAYDPTPRAGGFIDGRFMTGIRPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVVNYDSTVRDSDGSLIQIYYGEDGLDVPASTFLKKNQMDFLVDNKNVIVDPNLVRNLKQDS-NYESTLKSVKKIKKWSKKHGNSLNTKRRNEFFIFSGENYNPNSSKSKRIDGNSGRSKGTLSLLRKWIRMDEETKKSYKKQCVRCPDPLISKFRQDTEFGVLSERLESLMDEYMSNKSSGSNGKIEKNELRDLLWMKVMKSVCPPGEPVGLLAAQSIGEPSTQMTLNTFHHSGRSEMNVTLGIPRLREILMMASKVIKTPSMEIPFKRDLHNLSKQSNKLRQKLTKCILTDVLESIRIDREMEQLPHRRL-VHTLHIEFLPHKYYKSEFCVNPKSIIDKTEQMFF-KALFKEIKKTKLTGNLIHVE---EEKKQGNNEDALLDEDEPEDEPKEPKATVKRDF-GEQHESSDEEEVAEDADATVRRTMSRHQENQEYEE---DTEDEVENGNEKDDDNDFVEMKPDETRNEDSKVEEREEDDESLEYQNSDAKDTQKRRQNV------LKTYLYALEYEYDQVKSLWCTFKFWLPLRMIKIDLPTIIRKAASKVTLWETPNIRKAFTIEGSDGETILKTDGLNIIEMFKYNEILDLSRLYSNDIYGISQTYGIEAANKVIIREVKDVFKMYGITVDFRHLSLIADYMTFDGSFKPLSRKGMDDSASPFQQMSFESSLNFLRNATLQGKKDDLNSPSSRLMLGQPCKSGTGAFSLLAKI 1698
BLAST of EMLSAG00000006751 vs. nr
Match: gi|972201508|ref|XP_015182840.1| (PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Polistes dominula]) HSP 1 Score: 1471.06 bits (3807), Expect = 0.000e+0 Identity = 797/1741 (45.78%), Postives = 1111/1741 (63.81%), Query Frame = 0
Query: 12 HNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYN----DEVIVQKLMD-HLQNVLDSNKKPSVTHS------TRNVEALRKTCIKDFFN-VSLKKKCGECGGYTKKISLYQSRFIYEGEDEDASKNKTELN--------------PEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGE---DKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGS--LNSELRRFHRESYKA-PQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKS-----KIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKN-----NKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLP--HVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKD----------PDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNR-QMDDDYDEGLSDEETQMLNDFEKDENKSDEDDES--SQKYNEDELL-----------GQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
H + L+F F+++EI LS M+I P SFN LGHP++GGLYD +GP + C+TC CPGHFGHIELP+P VNPLF+K L LI+ SC++C L K L + K+L++GL+ + SL+EE S T N D V +Q +++ +++N+++ K S S T+NV A R I ++ K C C KI+ +++ I + D + T++ P++ + +LR+ W + + +K + P L + + E+ TDIFF +V+ PP RP + M HPQ + +++ I++ I+Q I +++ L E + + I+G T KL+Y W+ LQ VDHL+DRE+N + ++++ G KQ+IE+K G+ RMHMMGKRVN+AARTVITPDP ++IDEIG+PE+FA KL+Y VPVTPWNV ELR+LV+NGPNV PGA+ IE E G + + D +REA+AK LL PSSD +K V+RHL NGD +L+NRQPTLHK SIM+H+AR+LKGEK +RLHYA CKS+NADFDGDEMNAHFPQNE+ARSE + VS QYLVPKDGTPL GLIQDHVI+GV++++RG+FF++ +Y QLVY L+ KG ++ LPP+I KP LWSGKQIIST+++N IPP + L S KI W RPWK R ++S + M E+EVI NGEL+CGV+DK YGAT Y LVH YELYGG+ SS+LLSAF ++F FL EGFTLG+ DILV S A+ R+EI+ Q + +G+E S + + A+ S L+S++ ESY A P+ R +VD+ YK L TN IN CLP GL+KKFP NNLQLMVQ+GAKGS VNTMQISCLLGQIELEGKRPP+MISG+SLPSF YD PRAGGFIDGRFMTGI+PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGLVVNYD TVRDSDGS++Q YGED LD+ S ++ +Q+ FL DN +++P+ +K + + NS+ + LKS K KKR + R F FS +N + ID +GRS T L++KW D++++ +KK+ + PDP S FR D+ FG ++E++E+L+ Y+ N + + ++ RD+++ K MKS+ PGEPVG+LA QS+GEPSTQMTLNTFH +G EMNVTLGIPRLREILM+AS IKTPS I F H L + ++LR L +C L+DVL+++ + ++ + R + + ++FLP K YK++F V P SI++ E FF + + + L + VE + K+ + + D+D P ++ ++ G + E + E DADAT + M+R Q + +Y+E D E ++ + EK++ ++ D ++ NED L +++ I+ A ++QKRR HV + + LEY D+ K LW + P+ K+D +I+ AA K +++E NI KA+ + N ET + TDG+NI MF+++++LD++RL N I+ +++ YGIEAAN+ I E+ +VFK YGIT++ RHL+LIADYMTFDG++KP +R G++++ SPLQQM+FE+++ FLR+AT+QGKKD+L+SPSS ++LG+P GT +F ++ K+
Sbjct: 13 HLDPKYLTFSFFTTKEIEQLSVMKIRTPLSFNILGHPLKGGLYDPALGPLLESSDPCATCGSTVYKCPGHFGHIELPMPTVNPLFHKPLFMLIKLSCLNCFTLQIPTHIKMLLCAKLKILEMGLLSDID-----------SLEEEINSVTSKSQNIPESDLVYIQDIIENYIRNLVNKKKYVSNGQSNETLLNTKNVIAQRHLYIDSILKKYTVGKICINCHEAIPKITALKNK-IMTTKISDGAFTSTDMMSNNVVYKLENVIIMPDQSKEYLRKLWQNEEDFIKMIIPCLSNVKE-EYATDIFFFDVIPVLPPIVRPVNFLHGQMIEHPQSQVYKSIIQDCLILRNIIQYIQHDNTNLLPEEGKMVYDQIKGSTAVEKLHYAWQSLQTNVDHLMDRELNKTSESANCLGLKQVIEKKEGIIRMHMMGKRVNYAARTVITPDPNLDIDEIGVPEIFALKLTYPVPVTPWNVLELRKLVLNGPNVFPGAVTIENEDGTVQRLSPIDITKREAVAKRLL-PSSDKANRFFKGIKVVHRHLQNGDILLINRQPTLHKSSIMAHKARILKGEKTLRLHYANCKSFNADFDGDEMNAHFPQNELARSEGYLIANVSNQYLVPKDGTPLSGLIQDHVISGVRLTMRGQFFNRTDYMQLVYCGLVGHKGDLQLLPPSILKPVPLWSGKQIISTVLINIIPPNTARINLNSTAKINGKQWQTNKARPWKCGREFTNSEQ----MSEAEVIIRNGELLCGVLDKMHYGATPYGLVHCVYELYGGSYSSKLLSAFGKLFQAFLQREGFTLGIEDILVVSKADMKRKEIILQSRTLGEEVQKSLLEMPADTPSEVLSSKIE----ESYWADPKFRTQVDRKYKNVLDVYTNNINKTCLPAGLLKKFPHNNLQLMVQSGAKGSMVNTMQISCLLGQIELEGKRPPLMISGKSLPSFPAYDPTPRAGGFIDGRFMTGIRPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVVNYDSTVRDSDGSLIQIYYGEDGLDIPASTFLKKDQIDFLIDNQNVIVDPNLVKSLKQ----NSNYESTLKSVKRIKKWSKKRSILPNNTTRRNEFCIFSEENYNPNSAKSKFIDRNSGRSKATLSLLRKWIRMDEETKQLYKKQCSKCPDPLISKFRQDTEFGVLSERLENLMDEYMSNKSVGSKRKIEKKELRDLLWMKVMKSICPPGEPVGLLAAQSIGEPSTQMTLNTFHHSGRSEMNVTLGIPRLREILMMASKMIKTPSMEIPFKKGLHNLSKKSNELRKTLTKCMLTDVLKTIRIDREMVQLPNRRL-VHTLHIEFLPYKCYKSEFCVNPESIINKTENMFFKALFQEMKKSKLTGNLIHVEEEKKQGKNEDALLDEDEREDQDTSKTPKTTTNIKRDFGEEHESSDEEEVAE---DADATVKRTMSRHQENQEYEEDSEDTENEIEDGNEKEDGNNETVDTKLDVKRSNEDSKLEGEGEGEGEGEEDDENVEYINN--DAKDIQKRRQHV------LEKYLYALEYEFDQDKSLWCKFKFWLPMKMIKIDLPTIIRKAASKVILWETPNIRKAFTIEGTNGETILKTDGLNIIEMFKYNEILDLSRLYSNDIYGISQTYGIEAANKVIIREVKDVFKMYGITVDFRHLSLIADYMTFDGTFKPLSRKGMDDSASPLQQMSFESSLNFLRNATLQGKKDDLKSPSSRLMLGQPCKSGTGAFSLLAKI 1715
BLAST of EMLSAG00000006751 vs. nr
Match: gi|998501138|ref|XP_015510551.1| (PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Neodiprion lecontei]) HSP 1 Score: 1462.2 bits (3784), Expect = 0.000e+0 Identity = 793/1719 (46.13%), Postives = 1102/1719 (64.11%), Query Frame = 0
Query: 18 LSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVE----SQQCSHLVPTPGTSLDEESMSRTGS-EYNDEVI---VQKL-----MDHLQNVLDSNKKPSVTHSTRNVEALR----KTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIY--EGEDE-DASKNK---------TELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGE--DKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQK-RMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLK-----LISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKW-SEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKG-----EQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHV--LESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFD-AEEHASSDEEEQPDDADATEVKKMNR-QMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSF------HILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
L F MF++E+IRNLS +I+ P SFN LG+P++GGLYD +GP S++ C TC C GHFGHI+LPLPVVNPLF+K+L ++I+ +C+ C KL K L + + KLLD G + Q+ ++ G TG+ E+ EVI V++L ++H+ +L + + RNV R + ++ F +V + C C KIS +++R + DE DASK K + P++ Q++LRE W + ++LK + P L E+PTDI F +++ PP RP Y + HPQ + +++ +++ I+Q I + + L E + + IRG++ KL+ W+ LQ VDHL+DR++N + ++++ G KQ+IE+K G+ RMHMMGKRVNFAAR+VITPDP +NIDEIG+PE FA KL+Y VPVTPWNV ELR+++INGPNVHPGA+ +E E G I + +QRE++AK LLT S + + +K V+RHL NGD +LLNRQPTLHKPSIM+H+AR+LKGEK +RLHYA CK+YNADFDGDEMNAHFPQNE+ARSE N+ VS QYLVPKDGTPL GLIQDH+++GV++++RG+FF + +Y QLVY AL +++G I LPPAI KPK LWSGKQ++ST+I+N P G+ + L + TKI W + PR WK S +M E+EV+ NGEL+ GV+DK YGAT Y L+H YELYGGT SS +LSAF ++F FL +GFTLG+ DIL+ S+A+E R + ++ + IG+ S + L + + +E++ +ESY K + ++D+ YK L TN IN CLP GL+KKFP+NNLQLMVQ+GAKGSTVNTMQISCLLGQIELEGKRPP+MISG+SLPSF YD PRAGGFIDGRFMTGI+PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGL V+YD TVRDSDGS+VQ YGED LDV SQ++ Q+ FL N +++ L L +EH + + ++ K +K R+ F +FS N S NKI+ GRS L+++W + D++++ +K + PDP S ++ DSN+G + E++E LI Y+ K + ++ RD++ K MK++ PGEPVG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILM+AS NIKTPS I F P++ +E + +KLR+KL RC LS+VL S+ V ++ + R K+ ++FLP K+YK ++ V +L E FF ++ + A + L+ + +++ +D DP+S+ Q + D E H SSDE+E +DADAT + ++R Q + +YD + DE D D+ NEDE + +DD + + S A E +K + +NL K+ H +EY D+KK L E+ P+ KLD S +I++ A K V++E I +A+ ++ N ET + TDGINI MF+++++LD+NRL N I+ +++ YGIEAANR I E+ +VFK YGIT++ RHL LIADYMTFDG+++P +R G+EN+ SPLQQ++FE+++ FL++AT+ K+D+L SPSS +I+G+P GT SF +M ++
Sbjct: 21 LEFSMFTNEDIRNLSVTKISTPLSFNILGNPLKGGLYDPVLGPVSEKSDPCGTCGGNITKCSGHFGHIDLPLPVVNPLFHKQLASIIKLTCLRCFKLQVPEPMKLLLVAKIKLLDEGFVSGLSDLEQEVQSIIAAGGDG--------TGTVEFVKEVIEAHVERLHNRQRLNHIVPLLAEENR----SNARNVNMQRWMHVENILRQFQSVPI---CIHCQDSIPKISTFRNRIMTTKSANDELDASKIKRGIVRRLETVLMMPDQTQKYLRELWNTERDVLKIIMPCLSTVH-TEYPTDILFFSIIPVLPPIVRPVNYVNGQLIEHPQSQVYKAIIQDCLVLRNIIQTIQDGDTSKLPEEGRIVFEQIRGNSPSEKLHNAWQQLQANVDHLMDRDVNKTTESANCQGLKQVIEKKEGVIRMHMMGKRVNFAARSVITPDPNLNIDEIGIPEAFALKLTYPVPVTPWNVAELRQMIINGPNVHPGAVLVEGEDGSTTRISASAAVQRESIAKRLLTTSVKATKFFNGVKIVHRHLHNGDILLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNAHFPQNELARSEGYNIANVSNQYLVPKDGTPLSGLIQDHMVSGVRLTLRGKFFSREDYMQLVYCALSDIQGDITLLPPAIIKPKLLWSGKQLLSTVIINVTPRGKAKINLAASTKIGPKAWEARKPRRWKCGTEFSDPK----TMSEAEVVIRNGELLTGVLDKIHYGATPYGLIHCVYELYGGTYSSRMLSAFGKLFQAFLQRDGFTLGIEDILILSNADEERAKFIESCRKIGESTQKSVLELPED--TPMTEVKSKIQESYLINSKFQAQIDRKYKTALDVYTNDINKTCLPAGLLKKFPDNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPPLMISGKSLPSFAAYDPMPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLTVSYDSTVRDSDGSLVQLYYGEDGLDVPSSQFLKKEQLDFLVHNRNAIVEKELLSRLKEDLSTEHILKSGRKMQRWMKKHGDPLQKR-----RNSEFTKFSEKNRLSD-PKYNKINQVCGRSKGALRLMREWVNTDEETKESYKCS--RCPDPVFSKYKQDSNYGVLTERIEGLINDYISKRKVENSADISEDELRDLLSFKVMKTLCQPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPSMEIPFRPNLENIEKQSNKLRLKLTRCTLSNVLRSIDVDGRLEIEPQRRM-TYKLTIKFLPHKSYKREYCVKRKYVLQATEYLFFRELFKEIKKAAQVPGALLYTEENKEPANDDQLDADDPESAPSSQTKGRLDFGEMHESSDEDEAAEDADATAARSLSRHQENQEYD--------------DPDETSDDSDE------NEDEKM--RDDKTVATESNRAEETEK--SEFENLLAEKRKKLIVDMYPHAIEYDFDDKKYLSCELRFWLPLKMSKLDLSTIIRSVAEKVVLWETPQIKRAFTFQNLNNETVLKTDGINIVEMFKYNEILDLNRLYSNDIYGISQTYGIEAANRVIVKEVKDVFKMYGITVDPRHLLLIADYMTFDGTFQPLSRKGMENSASPLQQISFESSLTFLKNATLHNKRDDLVSPSSRLIIGQPCKSGTGSFDLMHRM 1684
BLAST of EMLSAG00000006751 vs. nr
Match: gi|646713776|gb|KDR17997.1| (DNA-directed RNA polymerase I subunit RPA1, partial [Zootermopsis nevadensis]) HSP 1 Score: 1458.35 bits (3774), Expect = 0.000e+0 Identity = 783/1688 (46.39%), Postives = 1076/1688 (63.74%), Query Frame = 0
Query: 12 HNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNKKPSVTHSTRNVEALRKTCIKDFFNVSLK-----KKCGECGGYTKKISLYQSRFIY-------EGEDEDASKNK-----TELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDK-MKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQK-RMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRG--MKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLP--HVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFD----------AEEHASSDEEEQPDDADATEVKKMNRQM-----------DDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEET-TITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGK 1653
H ALSF +FS +EI+ LS ++IT P SFN LGHP++ GLYD +GP + C TC C GH G+IEL LPVVNPLF+K + +++ +C++CH L V K LF+ + KLL GL+ E+Q+ +V G L E S E E++ +KL ++ +N++ K P T+ VE+L I D N K KKC C KI +Q++ + G E+ +NK T + P+E + HLR+ W + + + P+LK+C DM+HPTD FFL+++A PPPK RP + + HPQ + +++++ I++ I + I + + L EA+++L IRGDT KL W+ LQ+ VDHL+D M S + G K E+K G+ RMHMMGKRVNFAAR+VITPDP ++I+EIG+PE+FAK L+Y VPVT WNV +LR +V+NGP+V+PGA+ +E E G + I D IQRE++AK LLTP K MK V+RHL +GD +LLNRQPTLH+PSIM+H AR+LKGE+ +RLHYA CK+YNADFDGDEMNAHFPQNE+ARSEA NL+ V+ QYLVPKDGTPL GLIQDH++AGV +S+RGRFF + EYQQLV+ AL + KIK LPPAI KP WSGKQIIST+++N +P G+ ++L S KI W+ + PR W+ G +M E+EVI GEL+CGV+DK YGAT Y L+H ELYGG+ SS LL+AFS++FT+FL GF+LGV DILV A E R + + + +G++ S V L + SE++ + Y+ + R +D YK L +TN+IN AC+P GL+K FP NNLQLM+Q+GAKGSTVN MQIS LLGQIELEG+RPP M SG++LPSF YD PRAGGF+DGRFMTGIKPQEF+FHCMAGREGLIDTAVKTSRSGYLQRCL+K LEGLVV YDL+VRDSDGSVVQF YGED DV K+Q++ Q+ FL +N K++ N L+++ + S + + K KIRK KK K R F FS D +S K++ KTGRS R + W + D ++ + ++ PDP T+ FR FG++ EK+E L+ YLKN S +F ++M+ K ++S DPGEPVG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLRE+LM AS NIKTP+ + FLP H L+++ ++L++KL R +SDVL V VT+K+ ++ SR + ++ FLP +AYK+ F VTPS +L Y E FF + L + + V++ SKS +N + +D++ D + + Q D EEH SSDEE++ +D DAT + R M + + D + D+ ++ E D ++ + E + ++D++L +IP++ V VK + S + +I++Y D ++ELW ++ L P+ K+LD ++L++ A VI+EI ++ +A + N + ++ T+GIN + MF++D LLD+NRL N IH +A YGIEAA R I E+ +VFK YGI ++ RHL L+ADYMTF+G Y+PF+R IE++ SPLQQM+FE+++ FL+ A +GK
Sbjct: 1 HLNPSALSFSIFSQDEIKKLSEVKITTPLSFNALGHPLKAGLYDPALGPLHENSEPCYTCSNNVYNCSGHVGYIELSLPVVNPLFHKTIFHILKLACLNCHTLQVKGVAKVLFITKLKLLGEGLVTEAQETEEVV---GDILSSED-STVVDEVKAELMKEKLDEYYKNIMKDCKTPP---KTKFVESL----INDLLNAMDKSVLDMKKCLNCKAPIIKILSFQNKLVTTVLKADESGGAENGGENKGKKITTVILPDESRDHLRKIWRNEKEFMTTLSPVLKNC-DMKHPTDTFFLDLIAVPPPKMRPVNFVNNKLVEHPQTQAYKLIIQDSIIIQNITRTIRDGDTSSLPEEAKDLLEQIRGDTPEEKLMLAWQHLQSDVDHLMDSGMGQSNQR----GLKISPEKKEGIIRMHMMGKRVNFAARSVITPDPCLSIEEIGIPELFAKSLTYPVPVTEWNVADLRMMVLNGPDVYPGAVLVENEDGTKTRISTTDHIQRESVAKRLLTPGDTSDIYKGMKVVHRHLCSGDVLLLNRQPTLHRPSIMAHIARILKGERTLRLHYANCKAYNADFDGDEMNAHFPQNELARSEAYNLLNVNNQYLVPKDGTPLSGLIQDHIVAGVHLSVRGRFFGRDEYQQLVFQALSHRVSKIKLLPPAIIKPLPCWSGKQIISTVLINIVPTGQYPISLTSTAKIADKSWMVEEPRVWQA---GGTPFNDSNTMSEAEVIIRKGELLCGVLDKTHYGATPYGLIHCMNELYGGSCSSVLLTAFSKLFTSFLQRNGFSLGVEDILVVKAAEEQRIHFISRGRKVGNKAVRSAVDLPKT--ATRSEIKEKMEDVYQNYNRGRAMIDSSYKSMLDNITNKINKACIPNGLLKSFPYNNLQLMIQSGAKGSTVNAMQISGLLGQIELEGRRPPHMASGKTLPSFTRYDVTPRAGGFVDGRFMTGIKPQEFYFHCMAGREGLIDTAVKTSRSGYLQRCLVKHLEGLVVRYDLSVRDSDGSVVQFCYGEDGRDVMKAQFMKEKQIPFLSENCKAIKN-VPLEMLQDD--KTSSHIAKCKRKIRKWVKKNGSPFQKNRTTPFTTFSVDVQKSGSQKSKKLNKKTGRSKRAEEICSLWRDADSETLERYSSVGLKCPDPVTAYFRCYREFGALTEKLEQLMNDYLKNRPSKTKHEFCEMMFVKSLQSHSDPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLRELLMTASKNIKTPNMDVPFLPDVHHLKNKAERLKLKLCRVTVSDVLSCVDVTDKLEIY-PSRMQTYYMQFHFLPHEAYKSRFCVTPSYVLQYAETQFFKNIFYAL-RKKMKFRGSVIQVEKSKSSNNEDANDENVDPENVPEVQSDHDLVDRAKKAGVGEEHESSDEEQEGEDDDATTARNRQRHMENQEYEEPEEEEVEEDVAMYDK-----SEGEHDSDRMRHEHEDNDDLDDDDMLEADSEIPLLQDMPKNVNVLTYEARVKRVISSME---YIVDYDYDTEQELWCKLKLAVPLHYKRLDLTDLLREVAANSVIWEIPSLKRAITYVNPNAQNLSLKTEGINFQEMFKYDKLLDLNRLYSNDIHQIANIYGIEAARRVIVKEMQDVFKVYGIVVDPRHLLLVADYMTFNGKYEPFSRKTIEDHASPLQQMSFESSVNFLKIAVTRGK 1654
BLAST of EMLSAG00000006751 vs. nr
Match: gi|1134650323|ref|XP_011334972.2| (PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Cerapachys biroi] >gi|607362556|gb|EZA56803.1| DNA-directed RNA polymerase I subunit RPA1 [Cerapachys biroi]) HSP 1 Score: 1449.49 bits (3751), Expect = 0.000e+0 Identity = 779/1725 (45.16%), Postives = 1077/1725 (62.43%), Query Frame = 0
Query: 12 HNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMD-HLQNVL----------------DSNKKPSVTHSTRNVEALRKTCIKDFFNVSLKKKCGECGGYTKKISLYQSRFIYEGED------EDASKNKTE---LNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDK--MKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQK-RMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRG--MKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHV--LESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPL-------------IDATLLDKKLVVETGTSKSKSNNNIDDKDPD--SSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENKSD---EDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKLS 1684
H L F +F++ +IRNLS M+I P SFN LGHP++GGLYD +GP D CSTC CPGHFGHIELP+PVVNPLF+K L TL++ SC+ C V K L + KLL G + + HL + + + + N V++++D +++NVL +N K +T ++++ K ++ K C C +IS+ Q++ + D +K E + PE+ + H+R+ W + + LK + P L+ D+E+PTD+ F V+ PP RP + M HPQ + +++ +++ I+Q I + +E L E + + IRG T KL+ W+ LQ VDHL+D +MN + ++ + G +Q++E+K G+ RMHMMGKRVNFAAR+VITPDP +NIDEIG+PE FA KL+Y VTPWNV ELR+LV+NGP+V+PGA+ ++ E G + I +D +REA+AK LLT S E +K V+RHL NGD +LLNRQPTLHKPSIM+H+ARVLKGEK + LHYA CK+YNADFDGDEMNAHFPQN++ARSEA N+ VS QYLVPKDGTPL GLIQD++I+GV+++ RG FF + +Y QLVY+AL + +I LPPAI KPK+LWSGKQI+STII+N IPP + L SKTKI +W + PR WK K +M E+EV+ +GEL+CGV+DK YGAT Y +H YELYGGT +++LS F ++F +L EGFTLGV DIL+ + ++ R+EI+ + +G+ S + + + E++ ESY K R +VD YK L TN IN CL GL KKFP+NNLQLMVQ+GAKGSTVNTMQISCLLGQIELEGKRPP+MISG++L SF YD+ PRAGGFIDGRFMTGIK Q+ FFHCMAGREGL+DTAVKTSRSGYLQRCL+K LEGL+VNYD TVRDSD S++QF YGED LD+ S+++ Q+AFL DN +++ L EH +S E+ ++ KIR+ K K R F +F +N+ + + K+D KTGRS L++KW+E ++++ F+ + + PD S +R D FG ++E++E+++ YL + K RD++ K MK++ PGEPVG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILMVAS NI+TPS I F + LE + KLR+KL +C LSD+++ +++ I G R + I +++LP K YK +F + P + E FF + + LL KL + G +S N +D DPD S K + E H SSDEE+ +DADAT ++ M+R ++ E +EE ++ + E D+N + E+ E ++ K + I+ R+ V NL S + ++Y DE K W + T P+D LDF LI+ AA K V++ I KA+ ++ ET + TDG+NI MF+++++L++NRL N I++++R YGIEAANR I E+ +VF+ YGIT++ RHL+LIADYMTF+G+Y+P NR GIEN+ SPLQQ++FE+++ FLRSAT+QGK+D+L SPSS +++GKP GT +F I+ ++
Sbjct: 14 HENVSYLLFSVFTANDIRNLSVMKIRTPLSFNILGHPLKGGLYDPSLGPMMDNSEPCSTCSFSASRCPGHFGHIELPVPVVNPLFHKGLSTLLKLSCLHCFTFQIPVHIKLLLSAKLKLLHEGQLSD---IDHLDQEVSSMMSQLKSKNAKDKENQAEYVREIIDTYVENVLGRMRFGQPMFQECDGKQANIKNIITQWHTYIDSILKQFLRS------NKTCMNCHKGLSQISMLQNKIMINNARIGGRLLSDQVIHKVEAMIIMPEQSKEHMRQLWNNEKDFLKAIMPCLQ-LVDIEYPTDVLFFEVIPVLPPVVRPINFVDGQMIEHPQTQVYKSIIQDCLVLRNIIQTIQDGGTEHLPQEGRLVFEQIRGQTAVEKLHNAWQTLQTNVDHLMDCDMNKTAESVNSQGLRQILEKKDGIIRMHMMGKRVNFAARSVITPDPELNIDEIGIPEDFALKLTYPTTVTPWNVVELRQLVLNGPDVYPGAVMVQNEDGSVQAISSSDCTKREAVAKRLLTISDKISECHVGIKVVHRHLQNGDILLLNRQPTLHKPSIMAHKARVLKGEKTLHLHYANCKTYNADFDGDEMNAHFPQNDMARSEAYNIANVSNQYLVPKDGTPLSGLIQDYMISGVRLTTRGNFFSKIDYMQLVYTALSTSQDEIIFLPPAIVKPKRLWSGKQIVSTIIINVIPPNTARINLVSKTKISVKEWQVEAPRRWKCGT----EFKDPIAMSEAEVVIRHGELLCGVLDKTHYGATPYGFIHCVYELYGGTYGNKMLSVFGKLFQAYLQYEGFTLGVEDILITREIDKKRKEIISDCRTVGENVQKSLAKVPDDTAA--DEIKAKIEESYWNNTKFRAQVDHKYKSTLDVYTNDINKTCLLTGLFKKFPDNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPPLMISGKTLSSFPAYDSTPRAGGFIDGRFMTGIKLQDCFFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEGLIVNYDTTVRDSDNSLIQFSYGEDGLDIPGSRFLNKEQIAFLVDNKDVILDAQLL----EHLKTDSGEITKMIKKIRRWENKNGSALQKRRISEFSKFCIENTNQNNNKKRKVDSKTGRSKAALSLVRKWTEMTEEAKETFRAQCTKCPDTVMSKYRQDIEFGVLSERIENIMNEYLSRSPKIKKSDLRDLLSIKVMKTICPPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASKNIQTPSMEIPFQNGLQNLEKQAKKLRLKLTKCVLSDIVKDFTISKSIE-DGKQRKLVQTIMIEYLPHKCYKKEFIIHPRDAIKRTEEVFFKNMFAEISKQKDKIDKKEKRKKEMLLSSKLSL--GNKQSNDENTVDQIDPDEVSESIGGKTRMDLGEMHESSDEEQAAEDADATMMRSMSRHKENQEYEDPEEEEMDIIKEEEADDNNVNTILENKEDKDYDDDHNDDDNKTNNKKKKNPIN------RKDFVMNL------SLYAMDYVYDENKSSWCKFTFWLPLDMITLDFPTLIRKAADKTVLWGTPRIKKAFTFQNNKNETILKTDGLNIVEMFKYNNILNLNRLYSNDIYEISRTYGIEAANRVIIKEVKDVFQMYGITVDARHLSLIADYMTFNGTYQPLNRKGIENSASPLQQISFESSLAFLRSATLQGKRDDLTSPSSRLMVGKPCKSGTGAFSIISTMA 1703
BLAST of EMLSAG00000006751 vs. nr
Match: gi|91084933|ref|XP_970918.1| (PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Tribolium castaneum] >gi|270008555|gb|EFA05003.1| DNA-directed RNA polymerase I subunit RPA1-like Protein [Tribolium castaneum]) HSP 1 Score: 1444.87 bits (3739), Expect = 0.000e+0 Identity = 773/1708 (45.26%), Postives = 1073/1708 (62.82%), Query Frame = 0
Query: 7 TRNVVHNEAG-------ALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEY-----NDEVIVQKLMDHL--QNVLDSNKKPSVTHSTRNVEALRKTCIKDFFN-VSLKKKCGECGGYTKKISLYQSRFIYEGEDEDASKNKTEL------------NPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNI-NEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLP-HVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILE-YALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
+RN+ ++ G ++ F MF+ EEI+ L +I P + + LGHP+ GGLYD +GP +++ C TC FCPGHFG+IELPLPVVNP+FY+ + T++R +C+SC + K +Q +LL+ GL+ E+ + ++ + L ES+ + E + Q++ + L + VL T+N E LR + + V ++ C C +K+ + +++ I + + +K TE+ P+E + ++R W ++ +++ + +L + EHPTD+F+ +V+ PP RP ++ HP + ++ +++ I+Q + N+ L EA+ +G + KLN W+ LQ+ VD L+D +N++ G KQ+IE+KTG+ RMHMMGKRVNF+ARTVITPDP +NIDEIG+PEVFAK L+Y VPVT WNVEELR++++NGP+VHPGA+ +E E G K I+ N+ Q+E++ K LLTP G +K V+RHL NGD +LLNRQPTLHKPSIM+H ARVLKGEK RLHYA CK+YNADFDGDEMNAHFPQNE+ARSEA NLV V QYLVPKDGTPL GLIQDH+IAGVK+S+RGRFF++ +Y+ V+ AL N GKI LPPAI KP +LWSGKQI+ST+ +N IP G E + L + KI + W PR WK GS V +M E+EV+ GEL+ GV+DK YGAT Y LVH YELYGG ++ LLSA +++FT FL EGFTLGV DIL A++ R +I++ + IG + T+ + + + + + + S K P+ R VD+ YK L TN IN CLP GL+ KFPENNLQLMVQ+GAKG+TVNTMQISCLLGQIELEGKRPP+MISG+SLPSF ++ PRAGGFIDGRFMTGI+PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGL V YDLTVRDSD V+QF YGED +D+ K Q++ Q+ FL DN K +I+ LK++ + E + ++ ++++ + G L+ R + S + + K G F T + K W + D D ++ F+++ + PDP S+++PD +FGS+ EK+E+L+ +Y NK + +QF++++ K M+S+ PGEPVG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILM+AS NIKTPS I FLP LE + + LR L R ++DVLE V VT ++++ + R +R QFLPRK YKNDF V P IL ++ R FF ++ + + + LV+ D++++QK AS+D+EE+ +DADA E D DE D E + K + E +ES ++ + DE + P + + + V+ S++ + Y D KK W EIT G P++ KKLD + +++ A K V++E NI +A +T +N+ T+ TDGINI M ++ LLD+NRL CN IH MA YGIEAA + I E+ +VF YGI ++ RHL+LIADYMTF+G+++P +R G+E++ SPLQQMTFE+++ FLR+ATI GK+DNL +PSSC+++GKP GT F+++ K+
Sbjct: 2 SRNIRKHDTGPKHLSFDSVVFSMFTKEEIKKLCITKICTPLTLDPLGHPLSGGLYDKSLGPMTEKSEPCGTCRKNLYFCPGHFGYIELPLPVVNPIFYRMIGTILRMACLSCFRFQIPEHVKYSITLQIRLLNCGLVTEAVEIANSIAL--LILVHESLENIPEDVVLPIRKYETLAQEMQEKLNGEYVL-----------TKNTETLRNQFVNEMLREVKARETCMHCKHSMEKVQVLRNKIIL-SKKRNVAKGSTEVLGKVKAFEAKYVTPDESRTYMRNIWKEEKELMREIIAVLGGV-EGEHPTDVFYWDVIPVIPPNMRPVNIVNSRVSEHPTSQLYKNIIHNTILLRLIIQVVKNKGDLGSLPPEAKGAYNVSKGSSPIEKLNLAWESLQSEVDSLID---TTYIRNANVAGLKQIIEKKTGIIRMHMMGKRVNFSARTVITPDPNLNIDEIGIPEVFAKHLTYPVPVTSWNVEELRKMIMNGPDVHPGAVMVEYEDGTIKRINTNNTTQQESILKRLLTPDKIVGFRGVKRVHRHLCNGDVLLLNRQPTLHKPSIMAHTARVLKGEKTFRLHYANCKAYNADFDGDEMNAHFPQNELARSEAYNLVNVCNQYLVPKDGTPLSGLIQDHMIAGVKLSLRGRFFNEVDYKHFVFQALANKTGKIILLPPAIIKPCQLWSGKQILSTVFINIIPEGHERINLTASAKISAKAWQTAPPRKWKGG--GSRFVNPN-TMSEAEVVIRGGELLVGVLDKTHYGATPYGLVHCMYELYGGVYATGLLSALAKLFTRFLQKEGFTLGVHDILTVEKADQRRRQIIEGARKIGLDVITTALDMPRD-SPIEEIVDKIRENSVKNPKWRATVDRQYKTALDSFTNDINKTCLPAGLVLKFPENNLQLMVQSGAKGTTVNTMQISCLLGQIELEGKRPPVMISGKSLPSFPIFEFAPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLTVGYDLTVRDSDKCVIQFLYGEDGMDISKLQFLNSKQLVFLADNSKGMIDKKALKMLKD----------EHQKSVKAHKQQLADWCEKFGHPLQRERKSPFSLFSSVVRAKTK-GTDFGTKEMTKLWKKADKDIKDSFRQQCIPCPDPVNSIYQPDHHFGSLNEKLEELMNTYQSTNKK-QTKQFQNMLKLKAMRSLCAPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPSMEIPFLPVENLEEKAEDLRKMLTRVVVADVLEKVDVTVELNVEPVRQHRYT-LRFQFLPRKYYKNDFYVGPKYILKHMTRKFFGEMFTAIRKLSKVTSNLVM--------------------MDEEKRQK-------ASNDDEEETNDADANE---------DSSDEEPEDTEDAKTGNKFKQIHDDQEPEESEREDSGDE---DTETAPPVDDKTNEAVVE---------------SYNFAQNYIYDTKKHHWCEITFGLPLEFKKLDLTAILRDVAAKSVLWETPNIKRA-ITYMKNDVLTLRTDGINILEMSKYHALLDLNRLNCNDIHKMAETYGIEAAMKIIVKEVQDVFNVYGIKVDPRHLSLIADYMTFNGTFEPLSRKGMESSASPLQQMTFESSLTFLRNATIGGKRDNLTNPSSCLMVGKPCVTGTGCFEVLHKM 1619
BLAST of EMLSAG00000006751 vs. nr
Match: gi|345483754|ref|XP_001602617.2| (PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Nasonia vitripennis] >gi|1032754721|ref|XP_016838265.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Nasonia vitripennis]) HSP 1 Score: 1441.79 bits (3731), Expect = 0.000e+0 Identity = 764/1703 (44.86%), Postives = 1100/1703 (64.59%), Query Frame = 0
Query: 10 VVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNK-KPS---VTHSTRNVEALRKTCIKDFF-NVSLKKKCGECGGYTKKISLYQSRFIYEGEDEDASKNKTE----------LNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGE--DKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRK--KRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKW-SEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKN-----NKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHF---LPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNN--IDDKDPDSSDKQQKQKGFD-AEEHASSDEEEQPDDADATEVKKMNR-QMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIM 1680
V H + +L+F +F++++I+NLS +IT P+SFN LGHP+ GGL+D +GP +D C TC C GHFGHI+LP+PV+NPLF+K L TL++ +C++C L + K L + LL G SH+ + + + S G + E + ++ LQ VL+ + K S +T+N + F S KKC C KI++ +++ + + ++A KN+++ L P++ + ++++ W + LK ++P L + + +++PTD+FF V+ PP RP + + HPQ + ++ ++ I+Q I + + L + + RG + KL+ W+ LQ VDHL+DR+M+ + ++++ G KQ+IE+K G+ RMHMMGKRVN+AAR+VITPDP +NIDEIG+PE FA KL+Y VPVTPWNV ELR+L++NGP+VHPGA+ IE + G + + +QREA+AK LLT + + +K V+RHL NGD +LLNRQPTLHKPSIM+H+AR+LKGEK +RLHYA CK+YNADFDGDEMNAHFPQNE+AR+E + VS QYLVPKDGTPL GLIQDH+IAGV++S+RG+FF++ +Y QLV+SAL ++G + LPPAI KP +WSGKQ+ISTII+N IP G+ + L + KI + +W PRPWK K +M ESEVI NGEL+CG++DK YGAT + L+H +ELYGGT+SS LLSAF ++F ++L GFTLG+ DILV+ A++ R EI+ + + IG+ S + + + + + + P+ R +VD+ YK L TN IN CLP GLIK FPENNLQLMVQ+GAKGSTVNTMQISCLLGQIELEGKRPP+MISG+SLPSF YD PRAGGFIDGRFMTGI+PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK +EGL++NYD TVRDSDGS+VQ YGED LD+ KS+++ Q FL +N ++ + LK + + + ++++L KI K KR +K R AF +FS ++++ I P GRS + L+KKW DD+++N ++ + + PDP T+ +R D +FG ++EK+E LI +YLK S E+ R+++ AK M ++ PGEPVG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLGIPRLREILM+AS NIKTPS I F LP+ L + +K+R+KL +C +++VL+ + V K+ + R I +++LP + YKN+F V P I++ ER FF ++ + A +V + N + +D+ D + D+ + + FD E H SSDEEE DDADAT + ++R Q + +YD+ +EE D +EN++D+ + + +D+ D+ + I+ + ++R+ + N+ + H L+Y D +K W ++ P+ +D +++ A K V++E I +A+ ++ + ET + TDGIN+ MF+++++LD++RL N I+ +++ YGIEAANR I E+ +VFK YGIT++ RHL+LIADYMTF+G ++P +R G+E++ SPLQQM+FE+++ FL++AT+QGK D+L SPSS ++LG+P GT +F +M
Sbjct: 13 VKHLDPKSLAFSVFTADDIKNLSVKKITTPDSFNVLGHPLIGGLHDPALGPLTDTSDPCRTCGCNVYKCTGHFGHIDLPMPVINPLFHKALQTLLKLACLNCFSLQIPPLAKLLLSAKLTLLQRGYF------SHIEGFEQEVMSQIADSNDGQGADIEYVRDQINAGLQKVLEVTRFKKSYKIADFNTKNTNMQWHLYVDSFLKQYSAGKKCIHCHEAISKITVLKNKIMIQRVLQNADKNESQGVVHKLEQVFLMPDQTKEYMQKLWQNEEETLKVIFPCLNNLT-IKNPTDVFFFEVIPVLPPIVRPVNFLDGQLIEHPQTQVYRSIIINCLTLRNIIQAIQDGDTSRLPDAGKLVYNNTRGSSAIEKLHNAWQELQANVDHLIDRDMSKTTESANCQGLKQVIEKKQGVIRMHMMGKRVNYAARSVITPDPNLNIDEIGIPEAFATKLTYPVPVTPWNVAELRQLILNGPDVHPGAVMIEGDDGFITRLTAENYVQREAIAKRLLTVTEKANKFFHGVKIVHRHLQNGDMLLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNAHFPQNELARAEGYYIANVSNQYLVPKDGTPLSGLIQDHMIAGVRLSLRGKFFEKEDYMQLVFSALSVIQGNLILLPPAIIKPIPMWSGKQVISTIIINIIPRGKALINLTAGAKIGAHEWQVTKPRPWKCGE----EFKNPKTMSESEVIIRNGELLCGILDKKHYGATPFGLIHCVFELYGGTTSSRLLSAFGKVFQSYLQRIGFTLGIEDILVKQKADKKRTEIISECRKIGESIHKSILEVPEDT-PMEIVTAKMEESYWSNPKFRAQVDRKYKTALDVYTNNINKTCLPAGLIKTFPENNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPPLMISGKSLPSFPAYDPAPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHMEGLMINYDATVRDSDGSLVQIYYGEDGLDILKSRFLNDEQFEFLVENRNAIADEQLLKQLKANA--DPQKISKLVKKIHKWEKRHGSSLVKNRTSAFTKFSAEHAKPDSSKNKIIIPACGRSKASLSLMKKWIRTDDETKNMYRSQCDRCPDPLTAKYRQDLDFGVLSEKLESLIDNYLKKKSGSFTTSIGKEELREVLCAKVMNTLCPPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPSMEIPFKKDLPN-LTKQANKVRLKLTKCYIANVLKHIKVERKL-VHQPQRQMQYTITVEYLPHRYYKNEFGVHPKDIITKTERLFFREIFRDIKKAAKSTGSIVYFNEEKRQTKNEDSKLDEDDAGAEDEPKSRGRFDLGEMHESSDEEEVADDADATTARSVSRHQENREYDDPEEEEEEPEEAD-NDNENENDKVNNAPAANKDDD-----DNFRVSMHGINRIQYEQRKLDIVNMYV------HALDYDYDAEKNQWCKLKFWLPIKLTNIDMPTILRNVANKVVLWETPAIKRAFTFQNPSGETILKTDGINVVEMFKYNEILDLHRLYSNDIYGISQTYGIEAANRVIVKEVKDVFKMYGITVDTRHLSLIADYMTFEGRFQPLSRKGMEDSASPLQQMSFESSLNFLKNATLQGKNDDLTSPSSRLMLGQPCNSGTGAFSLM 1687
BLAST of EMLSAG00000006751 vs. nr
Match: gi|1059861654|ref|XP_017797473.1| (PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Habropoda laboriosa] >gi|915667994|gb|KOC69722.1| DNA-directed RNA polymerase I subunit RPA1 [Habropoda laboriosa]) HSP 1 Score: 1428.69 bits (3697), Expect = 0.000e+0 Identity = 769/1706 (45.08%), Postives = 1081/1706 (63.36%), Query Frame = 0
Query: 12 HNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNK--KPSVTHS-----TRNVEALRKTCIKDFF-NVSLKKKCGECGGYTKKISLYQSRF----IYEGEDEDASKNKT-------ELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGE--DKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRFSRDNSESSMHDINKIDPKTGRSFRTNFLIKKW---SEDDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKN---NKSDKGEQFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHV--LESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKV---LIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSS-DKQQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKD-ENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
H + L F MF++ +IRNLS +I P SFN LGHP++GGLYD +GP + CSTC CPGHFGHIELP+PVVNPLF+K L TLI+ +C++C L K L + +LL G + + H V + S +R E + + + + ++ +N+L+ + P V ++ T+N+ T +++ + K C C KI +++ + E +E A K + P++ +++LR W + ILK + P D+E+PTDIFF V+ PP RP + M HPQ + +++ +++ I+Q I + + L E + + I+G+T KL+ W+ LQ VDHL+DR+MN + ++++ G KQ+IE+K G+ RMHMMGKRVNFAAR+VITPDP +N+DEIG+PE FA KL+Y PVTPWNV +LR+LV+NGP+VHPGA+ IE E G + I NDP+QREA+AK LLT S + +K V+RHL NGD +LLNRQPTLHKPSIM+H+AR+LKGEK +RLHYA CK+YNADFDGDEMNAH+PQNE+ARSE N+ VS QYLVPKDGTPL GLIQDH+++GV+++++G FF Q +Y QLVY+AL ++ I LPP+I KPK LWSGKQIIST+I+N PP + + L + KI +W + R WK S+ +M E+EVI NGEL+CGV+DK YGAT + L+H +ELYGGT S++LLSA ++F L GFTLG+ DIL+ A++ R+EI+ + IG++ S + L + ++ + + P+ R VD+ YK L TN IN CLP GL+KKFP+NNLQLMVQ+GAKGSTVNTMQISCLLGQIELEGKRPP+MISG+SLPSF PYD PRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGLV+NYD TVRDSDGS++QF YGED LDV S+++ Q++FL DN ++++ +K + E K K + + K + F R+S +N +ID ++GR+ ++KW +E+D + + + PDP S +R D +FG ++E++E+L+ Y+ + N + K + RD++ K MK++ PGEPVG+LA QSVGEPSTQMTLNTFHFAG GEMNVTLGIPRLREILM+AS NIKTPS I F + + +KLR+KL +C LS+VL+++ + K+ R + I + +LP K+YK +F + P +L E FF ++ + TLL V E S + + +D DPD + + + + E H SSDEE+ +DADAT ++ + R ++ E ++E + ++ E D EN++D+ Q+ ED DDI + ++ V +R H + + LEY DE+K W +++ P+ KLD +I+ A + V++++ I +A+ ++ + ET + TDGINI MF++D L++N+L N ++ M++ YGIEAANR I E+ +VFK YGITI+ RHL+LIADYMTF+G+++P +R G+E+ SPLQQM+FE+++ FL++AT+QGK+DNL SPSS ++LG+P GT + ++ K+
Sbjct: 15 HLDPKCLMFSMFTANDIRNLSVTKIRTPLSFNILGHPLKGGLYDPALGPLIESSDPCSTCGCNVYKCPGHFGHIELPMPVVNPLFHKGLCTLIKLTCLNCFTLQIPPFVKLLLSAKMELLRKGYFSDVEGLEHEV------MLVVSCTRNHYEVDIQSVQNVIDNYTENLLNRARLEHPLVQYNEVQLNTKNMNTQWHTYVENVLKQYTTPKVCVHCENAIPKIMTLKNKILTTKVSELSEEKADSQKVIHKLDTVMIMPDQTKKYLRNLWQNEKEILKVIIPCF-GMVDIEYPTDIFFFEVIPVLPPIVRPVNFVNGQMIEHPQSQVYKSIIQDCLVLRNIIQTIQDGDTNQLPEEGKLVFEQIKGNTAIEKLHNAWQSLQVNVDHLMDRDMNKTSESANCQGLKQVIEKKEGVIRMHMMGKRVNFAARSVITPDPNLNLDEIGIPEAFALKLTYPTPVTPWNVVQLRQLVLNGPDVHPGAVMIEHEDGGIQRISTNDPVQREAIAKRLLTTSDKANKFFKGIKVVHRHLQNGDILLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNAHYPQNELARSEGYNIANVSNQYLVPKDGTPLSGLIQDHMVSGVRLTVKGTFFAQEDYMQLVYAALSTMQDNIILLPPSILKPKPLWSGKQIISTVIINITPPNQARINLTASAKINVKEWQVEKARRWKCGTEFSNPT----TMSEAEVIIRNGELLCGVLDKTHYGATPFGLIHCVFELYGGTCSTKLLSALGKLFQAALQRNGFTLGIEDILLLKKADKKRKEIISNCRKIGEDIQKSILELPDD-TPMDIVASKMEESYWSNPKFRGLVDRKYKSALDIYTNDINKVCLPAGLLKKFPDNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPPLMISGKSLPSFPPYDPTPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVINYDSTVRDSDGSLIQFYYGEDGLDVPASRFLKKEQLSFLVDNKNAIVDKKMVKCLKEDSDTERILKLTKKIKKWESKNGSVLQKRKLHPFTRYSMENMNIKSSKFKEIDERSGRNKAALSFMRKWLRTAEEDKKWAY--DECEKCPDPVMSQYRQDIDFGVLSERLENLMDEYMSSKSRNVAVKKKDLRDLLSVKVMKTVCPPGEPVGLLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPSMEIPFRTKLKNVTKRSNKLRLKLTKCVLSNVLDNITINRKMEQL-PHRQLVHTITVNYLPYKSYKGEFCIQPHEVLKKTEEVFFKEIFKEIKKFATGTLL---YVEEEKKSTNDDDVLLDHGDPDEGIESELRSRTNLGEMHESSDEEDAAEDADATLIRSIARHRENQEYEDPEEDEMEDTSETEDDAENENDKSKTKDQQQEED------DDIA----NENSEFVPSKRYHTQRKQNIISMYMYALEYDYDEEKFAWCKLSFWLPLKMIKLDLPTIIRKVANRIVLWQVPRIKRAFTFQNNDGETVLKTDGINIIQMFRYDKSLNLNKLYSNDVYGMSQTYGIEAANRIIIKEVRDVFKMYGITIDLRHLSLIADYMTFNGTFQPLSRKGMEDAASPLQQMSFESSLTFLKNATLQGKRDNLVSPSSRLMLGQPCKTGTGACSLLVKM 1692
BLAST of EMLSAG00000006751 vs. nr
Match: gi|1101362466|ref|XP_018906903.1| (PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Bemisia tabaci]) HSP 1 Score: 1421.37 bits (3678), Expect = 0.000e+0 Identity = 793/1720 (46.10%), Postives = 1072/1720 (62.33%), Query Frame = 0
Query: 8 RNVVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQC-SHLVPTPGTSLDEESMSRTGSEYNDEVIVQKLMDHLQNVLDSNK--------KPSVTHSTRNVEALRKTCIKDFFN-VSLKKKCGECGGYT--------KKISLYQSRFIYEGEDEDASKNKTE------------LNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSL--NANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKC-RDGAFLRFSRDNSESSMHDI-NKIDPKTGRSFRTNFLIKKWSEDD-DSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKS-DKGEQ--FRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFL----PHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGTSKSKSNNNIDDKDPDSSDKQQK---QKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDENKSDEDDESSQKYNEDELLGQKDDIPIISRSISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQK 1682
R+V +EA FG++SSEE++N+S ++I NSFN LGHP+ GGLYD R+GP DR +SC+TC CPGH GHIELP V+NPLF+K + +I SC+ CH + K+L Q +LLD G IVE+ SH++ + D ES EV L L ++S K K + S ++ + R + K F+ V + C C T K +S + R EG D + S + T L+P EL+ HL+ W D ++ + P+LK S PTDI FL+ + P RP HP + ++ ++K I+ N + E + E + RG T+ KL W LQ+ VD LL ++ S N G KQ+IE+K G+ RM+MMGKRVNFAAR+VITPDP I+I+EIG PE FAK L+Y VPVTPWNV ELRELV NGP ++PGA+ I E+G I + P++RE+LAK LLTP K+ V RHL+NGD +L NRQPTLHKPSIM+H+AR+LKGEK +RLHYA CK+YNADFDGDEMN HF QNEVARSEA ++V ++QYLVPKDGTPL GLIQDHVI V ++ RG FFD+ Y LVY AL ++ IK LPP + KPK LWSGKQ++ST+I+N P G+ + L S +KI + W S+L +H +K +M ESEVI NG+L+ GVIDK GAT Y LVH+FYELYGG +SS LLS+FS++FT L EGFTL V DILV+ A+E R +I++++++IG A ++L + + +++ EL H++ P R VD+ YK L +TN INS CLPRGL+++FP NNLQLMVQ+GAKGSTVNTMQISCLLGQIELEGKRPP+M SGRSLPSF PYDT PRAGGFIDGRFMTGI+PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK LEGLVVNYD+TVRDSDGSV+QF YGED LDVCKSQY PN + FL N++SV++ + ++ + D++ K++ R++ R M+ + +F+RFS D S ++ +I+P GRS+ L KKW E D ++ ++ + PDP S + P S FGS++EK+++++++Y++N+ KG Q RD++ K + S+ PGEPVG+LA QS+GEPSTQMTLNTFHFAG GEMNVTLG+PRLREIL VA+ +KTP + FL P LE +KL+ + + L DVLE ++V+E++ L R + ++ +QFLP +AYK+ +V P+ IL +VE+YF ++ I ++ A+ + E + +K+ N + ++ + ++ K +K D + +S E E D+ DAT K+ +Q + YDE E+ E +ED++L + D ++EVQ R +V ++ F + EY D W ++TL P+ + +DFS++I+ A VIYEI NI +A +T + + T + TDGIN+ MF + D LDIN+L N IH +A YGIEAA R I E+ NVF+ YGIT++ RHL L+ADYMT+DG+Y P NR GIE N SP+QQM+FE ++ FL++A +QGK D LQSPSS I +GK GT ++ K
Sbjct: 13 RSVYSDEA---FFGIYSSEEVKNMSVVKIVTTNSFNVLGHPLPGGLYDPRLGP-CDRMLSCTTCGWMAMKCPGHTGHIELPFEVINPLFHKRIFEIISISCLQCHHVLLPPKAKSLLQCQLRLLDAGFIVEAANVESHIIGNDNSCSDNES---------PEVFFNFLTSKLDQYIESLKQSQDKSDCKARLNQSFKSYDQERSSFFKLAFDQVKKNRVCPLCKYDTPILTFSGNKILSAPRKRKTIEGTDLNKSTDGTSKSFERVRSGQVFLSPTELKDHLKSIWTNDKTFIEELIPVLKR-SPCSVPTDIIFLDAILVTPSAMRPFNIVRNSPVEHPNNTVYKSILANCFLLKSILFLANPKDDETIPEEIISITNRARGLTVEEKLQTAWHELQSNVDILLLGKV--SSGNHVIPGLKQVIEKKEGIIRMNMMGKRVNFAARSVITPDPNIDINEIGFPEPFAKVLTYPVPVTPWNVVELRELVKNGPMIYPGAVAIVNENGTVHRISDSKPVERESLAKRLLTPEETAKGGKV--VLRHLMNGDILLANRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNTHFAQNEVARSEAYSIVNSTKQYLVPKDGTPLSGLIQDHVIGAVHLTTRGSFFDRVTYMHLVYQALSFIREPIKVLPPCMIKPKALWSGKQVVSTVIINLTPRGKVPLNLNSSSKIPV--------KAWAYSKL-AHLLKNPKTMSESEVIIRNGQLLSGVIDKTHCGATSYGLVHSFYELYGGEASSRLLSSFSKLFTCVLQLEGFTLDVKDILVKPKADEERSKIIEEVRSIGSLVAACAMNLPPDTDPEAISKELEISHQQ---IPNFRAIVDREYKSALDALTNSINSTCLPRGLLEEFPRNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPPLMTSGRSLPSFKPYDTSPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVVNYDMTVRDSDGSVIQFLYGEDGLDVCKSQYFKPNLLQFLEKNVESVVDKACIRQFKKQA--EVDQVIAYMDKVKLWRRRNRAMRSKKQRSFVRFSADMKNSLRNNAPGQINPAYGRSYLDLLLCKKWEESDRRTKERYQDSNLVCPDPALSRYAPGSYFGSISEKLDEVVENYIENSLGLSKGRQKIVRDMVNYKALVSICPPGEPVGILAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGVPRLREILTVATKKLKTPCVDVPFLPCDTPKKLEKRAEKLKKNMMKITLEDVLEYINVSERLDL-EPHRHLVYELHMQFLPCQAYKDKTNVKPNEILKHVEKYFLRELQINIMKASKIKAAFTHENFSKSNKATGNENGEEEEKDEEGAKVVGKKKLDLDSDSSGSENEG-DEEDATVSKRRTQQQEQQYDE--------------------PEEGEKEAPADEDDILAPEQD--------DSAEVQDREFNV-----CEQYQF-VSEYKYDTVDGQWCKVTLWLPLSCQHMDFSSMIRKIASSSVIYEIPNIKRA-ITYENDGRTFLKTDGINLSEMFSYCDTLDINKLYSNDIHCVAEKYGIEAAARVIVKEVQNVFQVYGITVDPRHLLLVADYMTYDGTYSPMNRKGIEKNSSPIQQMSFECSLNFLKNAALQGKADLLQSPSSRIFVGKHCRLGTGMMDVLIK 1663
BLAST of EMLSAG00000006751 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1466_size39939-snap-gene-0.8 (protein:Tk09702 transcript:maker-scaffold1466_size39939-snap-gene-0.8-mRNA-1 annotation:"dna-directed rna polymerase i subunit partial") HSP 1 Score: 1714.51 bits (4439), Expect = 0.000e+0 Identity = 857/1454 (58.94%), Postives = 1066/1454 (73.31%), Query Frame = 0
Query: 10 VVHNEAGALSFGMFSSEEIRNLSAMEITNPNSFNQLGHPVQGGLYDLRMGPYSDRY-MSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKLHFSVVKKTLFLVQQKLLDLGLIVESQQCSHLVPTPGTSLDEESMSRT--GSEYNDEVIVQKLMDHLQNVLDSNKK--PSVTHSTRNVEALRKTCIKDFFNV-SLKKKCGECGGYTKKISLYQSRFIYEG-----EDED-------------ASKNKTELNPEELQRHLRETWLKDSNILKFMYPMLKDCSDMEHPTDIFFLNVVAXPPPKSRPCQYTGRIMTIHPQGASLQILVETVTIMKQIVQNINEESSEDLSSEAQEMLRTIRGDTMPMKLNYVWKVLQNCVDHLLDREMNASQKNSSGWGFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKK---GCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSL------NANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRF----SRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKGE--QFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGT-SKSKSNNNIDDKDPDS-SDKQQKQ--KGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDF 1419
+H+ +++F +++ +EI+ LSA IT+P SFN LGHP+ GGLYDLRMGP+SDR + CSTCLL + CPGH GHIELPLPV NPLFY +L +++ SC SCHK S KK LFLVQQKLL GLI+ +Q+ + +V +D+E + +E + KL D ++ L K +TR+VE L K K+F V S K C CG TK I Y+SRFIYEG +ED +K KTELN +E+++H RE W++D+ +L +++P L+ S ++PTD+FF++V+A PPPKSRPCQ+TG + IHPQ LQ +VE+V IMKQ++Q I + E L+ EA+EML +RG ++ +KL+ +WK LQ CVDH+LD+EM + GWGFKQLIERK G+FRMHMMGKRVN+AARTVITPDP I+IDEIGLPEVFAK+L+Y VPVTPWNVEELR++V+NGP++HPGA+F+E E+G RKMID + +QREALAKTLLTP + E K+VYRHLINGD MLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYA+CKSYNADFDGDEMNAHFPQNE+ARSEA N+V V +QYLVPKDGTPLQGLIQDH+IAGVKM+IRGRFF +A+Y Q V+ AL++ G+IK LPPAI KP+ LWSGKQIISTIILN +P G+ TL S +KIKS++W+ PR K GS KK +MCESEVIF GE + G++DKNQYG T +SLVH F+ELYGGT S +LLSAFS+IFTNFLHTEGFTLGV DILV +AN+ RE++M K +G++ A +GV+L + N L + +FHRE P++R+++D+ YK++L P TN IN ACLPRGLI++FP NNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISG+SLPSF PYDTQPRAGGFIDGRFM+GI+PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYD+TVRDSDGSV+QFQYGEDSLDVCK+QY+VP Q+ FL +N KS+++ ++L + D+L+ K K+ K + K G RD FLRF RD+ E + K GR+ + L+ +W D + H+ K PDP FRPDSNFGSV E V+++I+SYL++ K E +FRD+MY K M +MV+PGEPVGVLA QSVGEPSTQMTLNTFHFAG GEMNVTLGIPRLRE+LMVAS+NIKTPS I FLP + + ++D LRIKLNR L DVLE+VHVTEKI L G R R++ +R FLPRK+YK+ F +TP+ ILSY E++F KV P + A DK++VVE+ S +S N D D D +DK ++ + E HASSDEE+ PDDADAT+ +K NRQ DDD++EGLS++E M+ D
Sbjct: 19 TLHDFPESVTFSLYNDDEIKALSACSITSPMSFNALGHPLPGGLYDLRMGPFSDRGDLVCSTCLLHCEHCPGHIGHIELPLPVCNPLFYSTILQILKLSCFSCHKFRVSEFKKELFLVQQKLLSQGLIIAAQRATEVVDLKTEYVDDEGKKKKIKVDRATEEAGILKLKDFFEDELTQGKAVMTDTGGNTRSVEDLSKRYRKEFLKVTSGKGSCMNCGVTTKSIVHYRSRFIYEGLKAPIANEDPFNPMSKSKRMKSGAKEKTELNAQEVKKHFRELWIEDAQVLAYLFPTLR-SSTAKYPTDVFFVDVLAVPPPKSRPCQFTGGNLNIHPQTTGLQYVVESVIIMKQLLQVIQGKDLESLTKEAKEMLTALRGASLELKLDAIWKELQGCVDHVLDKEMKSGSSQKVGWGFKQLIERKQGIFRMHMMGKRVNYAARTVITPDPNISIDEIGLPEVFAKQLTYRVPVTPWNVEELRDMVVNGPDIHPGAVFVENENGYRKMIDPTNRVQREALAKTLLTPGTQ-DEVSTKYVYRHLINGDAMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAICKSYNADFDGDEMNAHFPQNELARSEAYNIVNVCKQYLVPKDGTPLQGLIQDHIIAGVKMTIRGRFFKRADYMQHVFGALVDFPGEIKTLPPAIIKPEPLWSGKQIISTIILNLVPQGKAPPTLLSTSKIKSNEWMKVKPRQCKAG--GSIPDKKQANNTTMCESEVIFREGEFLTGILDKNQYGTTQFSLVHAFFELYGGTYSGKLLSAFSKIFTNFLHTEGFTLGVRDILVTKEANKKREQVMDNTKKLGNQLAANGVNLKYDDPSDINEEELKDTMEQFHREWKAIPKRRVELDRAYKDKLAPATNDINGACLPRGLIQRFPYNNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGKSLPSFRPYDTQPRAGGFIDGRFMSGIRPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDMTVRDSDGSVIQFQYGEDSLDVCKAQYLVPEQLDFLVNNKKSILDQKAIELAQRYTA--VDKLDRAKRKMTKWKIKHGGKTHRDTGFLRFCLKKGRDHPELATQ-----VSKMGRTKLDDLLLDQWQNLTTDERKHYNHKSPLCPDPVAHEFRPDSNFGSVTEAVDEMIESYLQDKDPVKFETNEFRDMMYLKAMHAMVEPGEPVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREVLMVASANIKTPSMTIPFLPGLRDKDRDLLRIKLNRITLHDVLENVHVTEKIQLHGKRR-RLVTLRFNFLPRKSYKDRFGMTPAKILSYFEKFFIRKVFFPTLAALTKDKQVVVESAVDSALQSMNKTDSHDEDDIADKNMEKMDRAGVGEGHASSDEEDLPDDADATDARKKNRQADDDHEEGLSEDEEAMVKDL 1460
BLAST of EMLSAG00000006751 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1466_size39939-snap-gene-0.10 (protein:Tk09705 transcript:maker-scaffold1466_size39939-snap-gene-0.10-mRNA-1 annotation:"GH20789") HSP 1 Score: 1024.62 bits (2648), Expect = 0.000e+0 Identity = 530/921 (57.55%), Postives = 665/921 (72.20%), Query Frame = 0
Query: 810 DECATSGVSL------NANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLDVCKSQYIVPNQMAFLYDNMKSVINPSTLKLISEHCMNNSDELNELKSKIRKKRKKVRGMKCRDGAFLRF----SRDNSESSMHDINKIDPKTGRSFRTNFLIKKWSE-DDDSQNHFKKKYVQVPDPCTSVFRPDSNFGSVAEKVEDLIQSYLKNNKSDKGE--QFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNRCALSDVLESVHVTEKISLFGSSRCRIIKIRLQFLPRKAYKNDFSVTPSSILSYVERYFFSKVLIPLIDATLLDKKLVVETGT-SKSKSNNNIDDKDPDS-SDK--QQKQKGFDAEEHASSDEEEQPDDADATEVKKMNRQMDDDYDEGLSDEETQMLNDFEKDEN----KSDEDD-----------ESSQKYNEDELLGQKD----DIPIISRS-----------ISASEVQKRRTHVKNLTMSKKTSFHILEYALDEKKELWSEITLGFPVDQKKLDFSNLIKTAAVKGVIYEIKNINKAYLTKDENEETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQKL 1683
++ A +GV+L + N L + +FHRE P++R+++D+ YK++L P TN IN ACLPRGLI++FP NNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISG+SLPSF PYDTQPRAGGFIDGRFM+GI+PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYD+TVRDSDGSV+QFQYGEDSLDVCK+QY+VP Q+ FL +N KS+++ ++L + D+L+ K K+ K + K G RD FLRF RD+ E + ++K+ GR+ + L+ +W D + H+ K PDP FRPDSNFGSV E V+++I+SYL++ K E +FRD+MY K M +MV+PGEPVGVLA QSVGEPSTQMTLNTFHFAG GEMNVTLGIPRLRE+LMVAS+NIKTPS I FLP + + ++D LRIKLNR L DVLE+VHVTEKI L G R R++ +R FLPRK+YK+ F +TP+ ILSY E++F KV P + A DK++VVE+ S +S N D D D +DK ++ + E HASSDEE+ PDDADAT+ +K NRQ DDD++EGLS++E M+ D + + D DD +S +D+ G+ D +I S+S +S +E KRR V+ + +K + I++Y D +KELW +++LGF V K LD SN++K AA K VI+E+KNI +A+L +E +E +TTDG+NIEAMF+ D+LLD+ RL N+IH+MARYYGIEAANRTI SEI+NVFKAYGI +N RHLTLIAD+MTFDGSYKPFNR+GIENNPSPLQQMTFETAI FLR+AT+ GK D L SPS+CI+LGKP FGGTSSFK++QKL
Sbjct: 67 NQLAANGVNLKYDDPSDINEEELKDTMEQFHREWKAIPKRRVELDRAYKDKLAPATNDINGACLPRGLIQRFPYNNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGKSLPSFRPYDTQPRAGGFIDGRFMSGIRPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDMTVRDSDGSVIQFQYGEDSLDVCKAQYLVPEQLDFLVNNKKSILDQKAIELAQRYTA--VDKLDRAKRKMTKWKIKHGGKTHRDTGFLRFCLKKGRDHPELATQ-VSKM----GRTKLDDLLLDQWQNLTTDERKHYNHKSPLCPDPVAHEFRPDSNFGSVTEAVDEMIESYLQDKDPVKFETNEFRDMMYLKAMHAMVEPGEPVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREVLMVASANIKTPSMTIPFLPGLRDKDRDLLRIKLNRITLHDVLENVHVTEKIQLHGKRR-RLVTLRFNFLPRKSYKDRFGMTPAKILSYFEKFFIRKVFFPTLAALTKDKQVVVESAVDSALQSMNKTDSHDEDDIADKNMEKMDRAGVGEGHASSDEEDLPDDADATDARKKNRQADDDHEEGLSEDEEAMVKDLATQLDDFLEERDPDDVKPVSSLMSSRVASPTLEQDDGFGEMDTKEEEIKGESKSANTTQTREALNMSQTEATKRRLWVQEMGDAKGFA-TIVDYIFDTEKELWCQLSLGFEVAHKTLDMSNVVKKAAEKAVIHEVKNIKRAFLINNEKDEPCLTTDGVNIEAMFRHDNLLDLRRLTSNNIHEMARYYGIEAANRTIVSEIINVFKAYGIVVNPRHLTLIADFMTFDGSYKPFNRIGIENNPSPLQQMTFETAISFLRNATLGGKTDTLDSPSACIVLGKPCFGGTSSFKVVQKL 978
BLAST of EMLSAG00000006751 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold403_size186359-processed-gene-0.22 (protein:Tk07442 transcript:snap_masked-scaffold403_size186359-processed-gene-0.22-mRNA-1 annotation:"dna-directed rna polymerase iii subunit rpc1") HSP 1 Score: 334.339 bits (856), Expect = 7.779e-94 Identity = 217/621 (34.94%), Postives = 330/621 (53.14%), Query Frame = 0
Query: 396 GFKQLIERKTGLFRMHMMGKRVNFAARTVITPDPYINIDEIGLPEVFAKKLSYCVPVTPWNVEELRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKG--KIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYEL---YGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSLD 1011
GF Q ++ K G FR ++ GKRV+F++RTVI+PDP + I+++G+P AK L+Y V N+E +R+LV +GP++HPGA F+ET K R+ +A+ L + V RH+++ D +L NRQP+LH+ SIM HRA++ + ++ R + VC YNADFDGDEMN H PQ E AR+EA L+G + P++G L QD + G ++ + FFD + Q+V L + KI PPAI KP++LW+GKQI ++ P R + TK KS ++ + + +S VI N +L+ G +DK+ G+ S + FY L +G + + SR+ + +L GF++G+ D+ + +++++ + G ++ A G+L S+ + E+ +A +K +E+ G + L N M G+KGS +N Q+ +GQ + GKR P R+LP F + P A GF++ F +G+ P EFFFH M GREGL+DTAVKT+ +GY+QR L+K LE LV +YD TVR+S VVQF+YG D LD
Sbjct: 382 GFVQRLKGKQGRFRGNLSGKRVDFSSRTVISPDPNLRIEQVGVPIHVAKILTYPQKVHQANLELMRKLVASGPDIHPGANFVETTFNGVKTKKFLKYGNRKKIAQDLRCGDT---------VERHMMDNDLVLFNRQPSLHRISIMCHRAKI-QEDRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALILMGNKSNLVTPRNGELLIAANQDFITGGYLLTQKDVFFDHNKTCQIVAQILAGDEKLMKIDLPPPAILKPQRLWTGKQIFGMLLK---PNQRCPILANLVTKGKS------------------YTSNEEFCVNDSWVIIRNSQLLAGSMDKSTLGSG--SKNNIFYILLRDWGQDQACVAMWRLSRVASWYLMHRGFSIGIGDVTPSKHLLKKKQDLV----DFGYNKCNDYIAQLAE-GALPSQAGQSEEETLEA--LILKELSAIREKAGKAS-----------LTALHKSNAPLTMALCGSKGSFINISQMIACVGQQAISGKRVPNGFEDRALPHFERHSKIPAAKGFVENSFYSGLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLVQHYDDTVRNSSNEVVQFEYGGDGLD 951 HSP 2 Score: 90.8929 bits (224), Expect = 2.814e-18 Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 0
Query: 1168 QFRDIMYAKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHF 1245
+F + KYMK++++PG VG L QS+GEP TQMTL TFHFAG MN+TLG+PR++EI+ AS I TP +H
Sbjct: 1056 EFVEKCKEKYMKAVMEPGTAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIIN-ASKKISTPIITVHL 1132 HSP 3 Score: 74.3294 bits (181), Expect = 3.173e-13 Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 1567 NSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGIEN-NPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIMQK 1682
N+ +++A GIEAA +TI EI +++G++I+ RH+TL+AD M+ G R G+ S L +FE L A G+KD + S CII+G P GT K++ K
Sbjct: 1292 NNTYEVANTLGIEAARKTIMKEIQYTMESHGMSIDRRHITLLADLMSCRGEVLGITRHGLAKMKESVLMLASFEKTSDHLFDAAYHGQKDVISGVSECIIMGIPMSVGTGLMKLLYK 1408 HSP 4 Score: 63.5438 bits (153), Expect = 5.987e-10 Identity = 32/99 (32.32%), Postives = 57/99 (57.58%), Query Frame = 0
Query: 18 LSFGMFSSEEIRNLSAMEITNPNSFNQLGH--PVQGGLYDLRMGPYSDRYMSCSTCLLRFDFCPGHFGHIELPLPVVNPLFYKELLTLIRHSCISCHKL 114
+ FGM S++E+ + +++ N +NQ V G+ D RMG S + +C+TC L C GHFG+I L LPV + +++ ++ +++ C SC ++
Sbjct: 60 ICFGMQSAQEMEQCAQLQVVAKNLYNQDASRSSVLYGVLDHRMGT-SQKDANCTTCGLGLSDCIGHFGYINLELPVFHVGYFRSIIQVLQCICKSCSRI 157
BLAST of EMLSAG00000006751 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold742_size103727-processed-gene-0.1 (protein:Tk09073 transcript:snap_masked-scaffold742_size103727-processed-gene-0.1-mRNA-1 annotation:"rna polymerase ii largest partial") HSP 1 Score: 283.878 bits (725), Expect = 1.277e-77 Identity = 183/551 (33.21%), Postives = 282/551 (51.18%), Query Frame = 0
Query: 460 LRELVINGPNVHPGALFIETESGQRKMIDGNDPIQREALAKTLLTPSSDPGEDKMKFVYRHLINGDRMLLNRQPTLHKPSIMSHRARVLKGEKVMRLHYAVCKSYNADFDGDEMNAHFPQNEVARSEAQNLVGVSEQYLVPKDGTPLQGLIQDHVIAGVKMSIRGRFFDQAEYQQLVYSALINVKGKIKCLPPAIFKPKKLWSGKQIISTIILNSIPPGRESVTLFSKTKIKSSDWLNQNPRPWKTSRLGSHSVKKGCSMCESEVIFSNGELVCGVIDKNQYGATMYSLVHTFYELYGGTSSSELLSAFSRIFTNFLHTEGFTLGVSDILVQSDANENREEIMKQLKNIGDECATSGVSLNANLGSLNSELRRFHRESYKAPQKRMKVDKGYKERLGPMTNRINSACLPRGLIKKFPENNLQLMVQAGAKGSTVNTMQISCLLGQIELEGKRPPIMISGRSLPSFLPYDTQPRAGGFIDGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLVVNYDLTVRDSDGSVVQFQYGEDSL 1010
+++LV G + +PGA +I ++G+R + +SD V RH+ +GD ++ NRQP+LHK S+M H+ +VL R++ + YNADFDGDEMN H PQ+ R+E N+ Q + P+ P G++QD + A KM+ R F D+ + LV L GK+ P+I KPK W+GKQ+ + II PG + F T SS+ N P W S ++ V+ NG+L+ G++ K GA+ SL+H G + + ++L EG ++G+ D + + +I+ +K DE V A+ L + R++++ R+ D +++ G R + +F NN ++MV AG+KGS +N Q+ +GQ +EGKR P R+LP F+ D P + GF++ ++ G+ P EF+FH M GREGLIDTAVKT+ +GY+QR LIK +E ++VNYD TVR++ G V+QF+YGED L
Sbjct: 1 MQDLVRRGNSQYPGAKYIIRDTGER-------------IDLRFHPKASDLHLQCGYKVERHIHDGDLVVFNRQPSLHKMSMMGHKVKVLPW-STFRMNLSDTSPYNADFDGDEMNLHVPQSMETRAEVLNIHLTPRQIIAPQANKPCMGIVQDTLTAVRKMTKRDVFLDKEQMMNLVM-FLPTWDGKLPI--PSIIKPKPFWTGKQLFTLII-----PGNVNCQNFHATHPGSSE--NNGPYSW-------------ISPGDTRVLIENGQLIMGILCKKTLGASAGSLLHVSQLENGHLENGLFYGNIQTVINDWLLLEGHSIGIGDTIADP---QTYADIISTIKKAKDEVIE--VIHKAHSDELEATPGNTLRQTFENQVNRILNDA--RDKTGGSAKRS---------LTEF--NNFKVMVVAGSKGSDINVSQVIACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNAVGQVIQFRYGEDGL 496 HSP 2 Score: 82.0333 bits (201), Expect = 1.473e-15 Identity = 43/89 (48.31%), Postives = 57/89 (64.04%), Query Frame = 0
Query: 1175 AKYMKSMVDPGEPVGVLAGQSVGEPSTQMTLNTFHFAGCGEMNVTLGIPRLREILMVASSNIKTPSSVIHFLPHVLESEKDKLRIKLNR 1263
+K+ + PGE VG +A QS+GEP+TQMTLNTFHFAG NVTLG+PRL+EI+ + S K PS + FL + +K + L R
Sbjct: 674 SKFNYAQATPGEMVGAMAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINI-SKKPKAPSLTV-FLTGTAARDAEKAKNVLCR 760 HSP 3 Score: 68.9366 bits (167), Expect = 1.235e-11 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 0
Query: 1539 ETTITTDGINIEAMFQFDDLLDINRLRCNSIHDMARYYGIEAANRTITSEIVNVFKAYGITINHRHLTLIADYMTFDGSYKPFNRVGI-ENNPSPLQQMTFETAIGFLRSATIQGKKDNLQSPSSCIILGKPWFGGTSSFKIM 1680
E + TDG + + D+ D R N I ++ GIEA +++ EI VF YGI +N+RHL L+ D MT G R GI + L + +FE + L A + D ++ S II+G+ GT++F ++
Sbjct: 932 EWLLETDGTALMRVLSERDV-DPVRTSSNDICEIFSVLGIEAVRKSVEKEINTVFSFYGIYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHAEVDPMRGVSENIIMGQLPRMGTAAFDLL 1073 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006751 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000006751 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000006751 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000006751 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 25
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BLAST of EMLSAG00000006751 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 25
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BLAST of EMLSAG00000006751 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000006751 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 4
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s378:546363..554008+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006751-689517 ID=EMLSAG00000006751-689517|Name=EMLSAG00000006751|organism=Lepeophtheirus salmonis|type=gene|length=7646bp|location=Sequence derived from alignment at LSalAtl2s378:546363..554008+ (Lepeophtheirus salmonis)back to top Add to Basket
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