EMLSAG00000006992, EMLSAG00000006992-689758 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006992 vs. C. finmarchicus
Match: gi|592814971|gb|GAXK01139597.1| (TSA: Calanus finmarchicus comp528717_c0_seq3 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 8.312e-1 Identity = 15/37 (40.54%), Postives = 24/37 (64.86%), Query Frame = 0 Query: 67 ENYSQKDEKENQTSNQMKKSYSTQEFEKI---NADIK 100 E+++ DE +N + +K SY+TQE EK+ AD+K Sbjct: 1186 EDFTSDDEGDNFMTMLLKPSYTTQESEKVLEPEADLK 1296
BLAST of EMLSAG00000006992 vs. C. finmarchicus
Match: gi|592814973|gb|GAXK01139595.1| (TSA: Calanus finmarchicus comp528717_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 8.467e-1 Identity = 15/37 (40.54%), Postives = 24/37 (64.86%), Query Frame = 0 Query: 67 ENYSQKDEKENQTSNQMKKSYSTQEFEKI---NADIK 100 E+++ DE +N + +K SY+TQE EK+ AD+K Sbjct: 1638 EDFTSDDEGDNFMTMLLKPSYTTQESEKVLEPEADLK 1748
BLAST of EMLSAG00000006992 vs. C. finmarchicus
Match: gi|592897665|gb|GAXK01060710.1| (TSA: Calanus finmarchicus comp8279376_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 4.338e+0 Identity = 13/33 (39.39%), Postives = 20/33 (60.61%), Query Frame = 0 Query: 77 NQTSNQMKKSYSTQEFEKINADIKFEMDQIQSL 109 N+TS+Q + YS + F K+N K E++ Q L Sbjct: 96 NETSHQRLRKYSARNFLKLNPKPKLELNVFQIL 194
BLAST of EMLSAG00000006992 vs. C. finmarchicus
Match: gi|592899055|gb|GAXK01059320.1| (TSA: Calanus finmarchicus comp3404377_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.4906 bits (62), Expect = 6.121e+0 Identity = 12/24 (50.00%), Postives = 18/24 (75.00%), Query Frame = 0 Query: 2 PHFIDKLREDIGDKKYSILLDEST 25 P+F DKL +++ D+ YS+ DEST Sbjct: 674 PYFHDKLVKNLQDRPYSLNFDEST 745
BLAST of EMLSAG00000006992 vs. C. finmarchicus
Match: gi|592925682|gb|GAXK01032733.1| (TSA: Calanus finmarchicus comp2739499_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 7.186e+0 Identity = 11/43 (25.58%), Postives = 24/43 (55.81%), Query Frame = 0 Query: 27 ISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEIKENY 69 ++++TY + + +++K F + P Q CD E++EN+ Sbjct: 656 LALITYTMNNVFWVVRSNK*PTDNFPNQGPSQTCDETEVRENH 784
BLAST of EMLSAG00000006992 vs. L. salmonis peptides
Match: EMLSAP00000006992 (pep:novel supercontig:LSalAtl2s:LSalAtl2s397:540170:543663:1 gene:EMLSAG00000006992 transcript:EMLSAT00000006992 description:"snap_masked-LSalAtl2s397-processed-gene-5.7") HSP 1 Score: 231.491 bits (589), Expect = 2.361e-79 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 Query: 1 MPHFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEIKENYSQKDEKENQTSNQMKKSYSTQEFEKINADIKFEMDQIQSLKIDQK 114 MPHFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEIKENYSQKDEKENQTSNQMKKSYSTQEFEKINADIKFEMDQIQSLKIDQK Sbjct: 1 MPHFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEIKENYSQKDEKENQTSNQMKKSYSTQEFEKINADIKFEMDQIQSLKIDQK 114
BLAST of EMLSAG00000006992 vs. L. salmonis peptides
Match: EMLSAP00000000288 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1042:72989:73461:1 gene:EMLSAG00000000288 transcript:EMLSAT00000000288 description:"snap_masked-LSalAtl2s1042-processed-gene-0.20") HSP 1 Score: 71.633 bits (174), Expect = 3.714e-17 Identity = 34/50 (68.00%), Postives = 45/50 (90.00%), Query Frame = 0 Query: 62 ANEIKENYSQKDEKENQTSNQMKKSYSTQEFEKINADIKFEMDQIQSLKI 111 N+IKE YSQ+DEKENQTSNQMKK+ ST+EFEKINA+IKFE+D+ ++ ++ Sbjct: 6 TNKIKEKYSQRDEKENQTSNQMKKTSSTREFEKINAEIKFEIDKYKASRL 55
BLAST of EMLSAG00000006992 vs. Select Arthropod Genomes
Match: gb|EFA13101.1| (hypothetical protein TcasGA2_TC012970 [Tribolium castaneum]) HSP 1 Score: 62.003 bits (149), Expect = 1.403e-11 Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0 Query: 10 EDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEI 65 EDIGD +S++LDESTDI+V YLG+ YFS K+V++F L L++CDA+ I Sbjct: 3 EDIGDSPFSLILDESTDITVDKYLGITNIYFSFKMNKIVNSFFDLVCLEQCDADSI 58
BLAST of EMLSAG00000006992 vs. Select Arthropod Genomes
Match: gb|EFA12080.1| (hypothetical protein TcasGA2_TC006887 [Tribolium castaneum]) HSP 1 Score: 46.2098 bits (108), Expect = 6.987e-7 Identity = 20/54 (37.04%), Postives = 35/54 (64.81%), Query Frame = 0 Query: 5 IDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQ 58 ++ L ED+ +K YS ++DESTDIS + YL + + YFS +++ FL + ++ Sbjct: 2 LEDLLEDLNEKYYSFIVDESTDISTIKYLAICVKYFSTKYDRIIIDFLGIVEVE 55
BLAST of EMLSAG00000006992 vs. nr
Match: gi|1048066502|ref|XP_017485766.1| (PREDICTED: uncharacterized protein LOC108374302 [Rhagoletis zephyria]) HSP 1 Score: 81.6481 bits (200), Expect = 7.731e-17 Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 0 Query: 2 PHFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEI 65 PHF ++LR DIGD K+S+LLDESTDISV LG+ I YFSK +++STFL LA L+ D+ I Sbjct: 74 PHFFEELRTDIGDSKFSLLLDESTDISVTKLLGIVIIYFSKTHNRIISTFLSLAELENADSGGI 137
BLAST of EMLSAG00000006992 vs. nr
Match: gi|1009387895|gb|KYN09966.1| (hypothetical protein ALC57_17904 [Trachymyrmex cornetzi]) HSP 1 Score: 79.7221 bits (195), Expect = 4.269e-15 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 0 Query: 2 PHFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQ 58 PHFID LR DIGD K+S+LLDESTDIS+ LG+ I YFS+ ++K+VSTFL +A L+ Sbjct: 139 PHFIDDLRNDIGDSKFSLLLDESTDISITKLLGIVIIYFSEKNRKIVSTFLSMANLE 195
BLAST of EMLSAG00000006992 vs. nr
Match: gi|1009388249|gb|KYN10273.1| (hypothetical protein ALC57_17587 [Trachymyrmex cornetzi]) HSP 1 Score: 79.7221 bits (195), Expect = 4.403e-15 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 0 Query: 2 PHFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQ 58 PHFID LR DIGD K+S+LLDESTDIS+ LG+ I YFS+ ++K+VSTFL +A L+ Sbjct: 139 PHFIDDLRNDIGDSKFSLLLDESTDISITKLLGIVIIYFSEKNRKIVSTFLSMANLE 195
BLAST of EMLSAG00000006992 vs. nr
Match: gi|1069696434|ref|XP_018307404.1| (PREDICTED: uncharacterized protein LOC108725111 [Trachymyrmex zeteki]) HSP 1 Score: 77.0258 bits (188), Expect = 1.202e-14 Identity = 36/64 (56.25%), Postives = 49/64 (76.56%), Query Frame = 0 Query: 2 PHFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEI 65 P+FI+ L+EDIG YS+++DESTDISV YLG+ I Y+S+N+ K+V TFL L PL CDA+ + Sbjct: 150 PYFIENLKEDIGSSPYSLIIDESTDISVQKYLGIII-YYSENTNKIVYTFLDLVPLINCDADSL 212
BLAST of EMLSAG00000006992 vs. nr
Match: gi|985423264|ref|XP_015377124.1| (PREDICTED: uncharacterized protein LOC107171397 [Diuraphis noxia]) HSP 1 Score: 75.8702 bits (185), Expect = 1.402e-14 Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 0 Query: 2 PHFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEI 65 PHF LR IG++ YSIL+DESTDISV YLG+ I YF+K+ +L ST+L L ++ CDA I Sbjct: 140 PHFETSLRTSIGNQPYSILVDESTDISVTKYLGITIMYFNKDLGQLTSTYLALIEMESCDAEAI 203
BLAST of EMLSAG00000006992 vs. nr
Match: gi|641650710|ref|XP_008189844.1| (PREDICTED: uncharacterized protein LOC103311853 [Acyrthosiphon pisum]) HSP 1 Score: 75.8702 bits (185), Expect = 9.386e-14 Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 0 Query: 2 PHFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEIKENYSQKDEKEN 77 PHF LR IGD+ +S+L+DESTDISV+ +LG+ I YF K+VST+L L ++ CDA+ I++ EK+ Sbjct: 140 PHFQATLRASIGDQPFSLLIDESTDISVLKFLGITIMYFDLKVGKIVSTYLALVEMEACDADAIQKAVCDAIEKKG 215
BLAST of EMLSAG00000006992 vs. nr
Match: gi|985425700|ref|XP_015378330.1| (PREDICTED: uncharacterized protein LOC107172553 [Diuraphis noxia]) HSP 1 Score: 75.485 bits (184), Expect = 1.085e-13 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0 Query: 2 PHFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEIKENYSQKDEK 75 P F L++DIG+ K+S+LLDESTDISV YLG+AI YFS +V+TF L L EC+A I E+ + EK Sbjct: 139 PFFKTDLKDDIGNNKFSLLLDESTDISVTKYLGIAIIYFSTQKSTIVTTFFXLEKLVECNAQAIVESVEKSLEK 212
BLAST of EMLSAG00000006992 vs. nr
Match: gi|795012910|ref|XP_011880473.1| (PREDICTED: uncharacterized protein LOC105568978 [Vollenhovia emeryi] >gi|795012913|ref|XP_011880481.1| PREDICTED: uncharacterized protein LOC105568978 [Vollenhovia emeryi]) HSP 1 Score: 73.9442 bits (180), Expect = 4.026e-13 Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 0 Query: 3 HFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEI 65 HF++ LR DIGD K+S+LLDESTDISV LG I YFSK +K++STFL +A L+ +A +I Sbjct: 139 HFVEDLRIDIGDSKFSLLLDESTDISVTKLLGSVIIYFSKKQQKIISTFLSMAELKSGNAEDI 201
BLAST of EMLSAG00000006992 vs. nr
Match: gi|1070596383|ref|XP_018395381.1| (PREDICTED: zinc finger protein 862-like [Cyphomyrmex costatus]) HSP 1 Score: 71.633 bits (174), Expect = 6.275e-13 Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 0 Query: 2 PHFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEI 65 PHF++ L D+G+ KYS+LLDES D+SV LG+ I Y+S N K +S+FL L L+ C+A+ I Sbjct: 21 PHFLNDLLSDVGNGKYSLLLDESNDVSVNKLLGIVIIYYSNNHGKTISSFLALTKLETCNADSI 84
BLAST of EMLSAG00000006992 vs. nr
Match: gi|1009402869|gb|KYN22466.1| (hypothetical protein ALC57_05135 [Trachymyrmex cornetzi] >gi|1009408044|gb|KYN27431.1| hypothetical protein ALC57_03140 [Trachymyrmex cornetzi]) HSP 1 Score: 71.2478 bits (173), Expect = 3.442e-12 Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 0 Query: 3 HFIDKLREDIGDKKYSILLDESTDISVVTYLGLAIHYFSKNSKKLVSTFLHLAPLQECDANEI 65 HFI LR DIG+ +S+L+DESTD+S + +LGL I Y+S+ +K +VSTFL+L L++ DA I Sbjct: 139 HFIKDLRNDIGNSPFSLLIDESTDLSTLKFLGLTIKYYSEKTKDIVSTFLYLKQLKDYDAASI 201 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006992 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006992 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 5
BLAST of EMLSAG00000006992 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000006992 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006992 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 2
BLAST of EMLSAG00000006992 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000006992 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s397:540170..543663+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006992-689758 ID=EMLSAG00000006992-689758|Name=EMLSAG00000006992|organism=Lepeophtheirus salmonis|type=gene|length=3494bp|location=Sequence derived from alignment at LSalAtl2s397:540170..543663+ (Lepeophtheirus salmonis)back to top Add to Basket
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