EMLSAG00000007823, EMLSAG00000007823-690589 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000007823 vs. GO
Match: - (symbol:C5 "Complement C5a anaphylatoxin" species:9823 "Sus scrofa" [GO:0001701 "in utero embryonic development" evidence=IEA] [GO:0004866 "endopeptidase inhibitor activity" evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA] [GO:0006956 "complement activation" evidence=IEA] [GO:0010575 "positive regulation vascular endothelial growth factor production" evidence=IEA] [GO:0010760 "negative regulation of macrophage chemotaxis" evidence=IEA] [GO:0045766 "positive regulation of angiogenesis" evidence=IEA] [GO:0090197 "positive regulation of chemokine secretion" evidence=IEA] InterPro:IPR000020 InterPro:IPR001134 InterPro:IPR001599 InterPro:IPR001840 InterPro:IPR002890 InterPro:IPR009048 InterPro:IPR011626 Pfam:PF00207 Pfam:PF01821 Pfam:PF01835 Pfam:PF07677 Pfam:PF07678 PRINTS:PR00004 PROSITE:PS01177 PROSITE:PS01178 PROSITE:PS50189 SMART:SM00104 GO:GO:0005615 GO:GO:0010951 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0001701 GO:GO:0006954 Gene3D:2.60.40.690 InterPro:IPR011625 Pfam:PF07703 SUPFAM:SSF49410 TreeFam:TF313285 GO:GO:0004866 GO:GO:0010575 GO:GO:0045766 InterPro:IPR008993 SUPFAM:SSF50242 GO:GO:0090197 InterPro:IPR018933 Pfam:PF01759 GO:GO:0006956 Gene3D:1.20.91.20 InterPro:IPR018081 SMART:SM00643 SUPFAM:SSF47686 OrthoDB:EOG77HDCX GeneTree:ENSGT00560000077078 OMA:FIHTDKP GO:GO:0010760 EMBL:CU571013 Ensembl:ENSSSCT00000006062 Uniprot:F1SME1) HSP 1 Score: 42.743 bits (99), Expect = 2.226e-4 Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 37 DGLVGLSTGCGEDEDYSIWGPKSSEEDGLMWITAY-VKALSYASNYIDVDLNILQKSVIWII 97 +G+V + + D YS+W S+ W+TA+ ++ L AS YID DLN + S++W++ Sbjct: 982 EGVVSVMSFRNADHSYSMWKSGSAS----TWLTAFALRVLGQASKYIDQDLNSICNSILWLV 1039
BLAST of EMLSAG00000007823 vs. C. finmarchicus
Match: gi|592926547|gb|GAXK01031898.1| (TSA: Calanus finmarchicus comp20855_c10_seq7 transcribed RNA sequence) HSP 1 Score: 61.2326 bits (147), Expect = 3.552e-11 Identity = 42/132 (31.82%), Postives = 59/132 (44.70%), Query Frame = 0 Query: 14 VDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGEDE-----------------------------------------------DYSIWGPKSSEEDGLMWITAYV-KALSYASNYIDVDLNILQKSVIWII 97 V +S +AW ++GDI A++++ LV L TGCGE YSIWG K ++DG W+TA+V K+ S AS YI VD N+LQ+SV W++ Sbjct: 407 VPDSERAWVYVTGDIMAPALENIGNLVRLPTGCGEQNMVGLVPNIYLLQYLDSTNQKEPELERKAKEFMEIGYNRQQKYNHPNGAYSIWGDKG-DKDGSTWLTAFVVKSFSEASQYIQVDTNLLQRSVNWLM 799
BLAST of EMLSAG00000007823 vs. C. finmarchicus
Match: gi|592926548|gb|GAXK01031897.1| (TSA: Calanus finmarchicus comp20855_c10_seq6 transcribed RNA sequence) HSP 1 Score: 61.2326 bits (147), Expect = 4.155e-11 Identity = 42/132 (31.82%), Postives = 59/132 (44.70%), Query Frame = 0 Query: 14 VDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGEDE-----------------------------------------------DYSIWGPKSSEEDGLMWITAYV-KALSYASNYIDVDLNILQKSVIWII 97 V +S +AW ++GDI A++++ LV L TGCGE YSIWG K ++DG W+TA+V K+ S AS YI VD N+LQ+SV W++ Sbjct: 580 VSDSERAWVYVTGDIMAPALENVGNLVRLPTGCGEQNMVGLVPNIYLLQYLDSTNQKEPELERKAKEFMEIGYNRQQKYNHPNGAYSIWGDKG-DKDGSTWLTAFVVKSFSEASQYIQVDTNLLQRSVNWLM 972
BLAST of EMLSAG00000007823 vs. C. finmarchicus
Match: gi|592926549|gb|GAXK01031896.1| (TSA: Calanus finmarchicus comp20855_c10_seq5 transcribed RNA sequence) HSP 1 Score: 60.8474 bits (146), Expect = 5.708e-11 Identity = 42/132 (31.82%), Postives = 59/132 (44.70%), Query Frame = 0 Query: 14 VDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGEDE-----------------------------------------------DYSIWGPKSSEEDGLMWITAYV-KALSYASNYIDVDLNILQKSVIWII 97 V +S +AW ++GDI A++++ LV L TGCGE YSIWG K ++DG W+TA+V K+ S AS YI VD N+LQ+SV W++ Sbjct: 698 VSDSERAWVYVTGDIMAPALENVGNLVRLPTGCGEQNMVGLVPNIYLLQYLDSTNQKEPELERKAKEFMEIGYNRQQKYNHPNGAYSIWGDKG-DKDGSTWLTAFVVKSFSEASQYIQVDTNLLQRSVNWLM 1090
BLAST of EMLSAG00000007823 vs. C. finmarchicus
Match: gi|592926536|gb|GAXK01031908.1| (TSA: Calanus finmarchicus comp20855_c10_seq17 transcribed RNA sequence) HSP 1 Score: 51.9878 bits (123), Expect = 3.039e-8 Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0 Query: 52 YSIWGPKSSEEDGLMWITAYV-KALSYASNYIDVDLNILQKSVIWII 97 YSIWG K ++DG W+TA+V K+ S AS YI VD N+LQ+SV W++ Sbjct: 5 YSIWGDKG-DKDGSTWLTAFVVKSFSEASQYIQVDTNLLQRSVNWLM 142
BLAST of EMLSAG00000007823 vs. C. finmarchicus
Match: gi|592926544|gb|GAXK01031901.1| (TSA: Calanus finmarchicus comp20855_c10_seq10 transcribed RNA sequence) HSP 1 Score: 51.6026 bits (122), Expect = 4.718e-8 Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 0 Query: 52 YSIWGPKSSEEDGLMWITAY-VKALSYASNYIDVDLNILQKSVIWII 97 YSIWG K ++DG W+TA+ VK+ S AS YI+VD N++Q+SV W++ Sbjct: 163 YSIWGDK-GDKDGSTWLTAFVVKSFSEASQYIEVDTNLVQRSVNWLM 300
BLAST of EMLSAG00000007823 vs. C. finmarchicus
Match: gi|592926540|gb|GAXK01031905.1| (TSA: Calanus finmarchicus comp20855_c10_seq14 transcribed RNA sequence) HSP 1 Score: 37.3502 bits (85), Expect = 2.753e-3 Identity = 28/106 (26.42%), Postives = 40/106 (37.74%), Query Frame = 0 Query: 14 VDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGEDE-----------------------------------------------DYSIWGPKSSEEDGLMWITAYV 72 V +S +AW ++GDI A++++ LV L TGCGE YSIWG K ++DG W+TA+V Sbjct: 580 VSDSERAWVYVTGDIMAPALENVGNLVRLPTGCGEQNMVGLVPNIYLLQYLDSTNQKEPELERKAKEFMEIGYNRQQKYNHPNGAYSIWGDK-GDKDGSTWLTAFV 894
BLAST of EMLSAG00000007823 vs. C. finmarchicus
Match: gi|592926533|gb|GAXK01031911.1| (TSA: Calanus finmarchicus comp20855_c10_seq20 transcribed RNA sequence) HSP 1 Score: 37.3502 bits (85), Expect = 3.188e-3 Identity = 16/36 (44.44%), Postives = 24/36 (66.67%), Query Frame = 0 Query: 14 VDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGED 49 V +S +AW ++GDI A++++ LV L TGCGE Sbjct: 407 VPDSERAWVYVTGDIMAPALENIGNLVRLPTGCGEQ 514
BLAST of EMLSAG00000007823 vs. C. finmarchicus
Match: gi|592926546|gb|GAXK01031899.1| (TSA: Calanus finmarchicus comp20855_c10_seq8 transcribed RNA sequence) HSP 1 Score: 37.3502 bits (85), Expect = 3.611e-3 Identity = 28/106 (26.42%), Postives = 40/106 (37.74%), Query Frame = 0 Query: 14 VDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGEDE-----------------------------------------------DYSIWGPKSSEEDGLMWITAYV 72 V +S +AW ++GDI A++++ LV L TGCGE YSIWG K ++DG W+TA+V Sbjct: 698 VSDSERAWVYVTGDIMAPALENVGNLVRLPTGCGEQNMVGLVPNIYLLQYLDSTNQKEPELERKAKEFMEIGYNRQQKYNHPNGAYSIWGDK-GDKDGSTWLTAFV 1012
BLAST of EMLSAG00000007823 vs. C. finmarchicus
Match: gi|592926571|gb|GAXK01031875.1| (TSA: Calanus finmarchicus comp20855_c3_seq8 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 4.435e-3 Identity = 16/35 (45.71%), Postives = 24/35 (68.57%), Query Frame = 0 Query: 14 VDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGE 48 V +S +AW ++GDI A++++ LV L TGCGE Sbjct: 12 VSDSERAWVYVTGDIMAPALENVGNLVRLPTGCGE 116
BLAST of EMLSAG00000007823 vs. C. finmarchicus
Match: gi|592926558|gb|GAXK01031887.1| (TSA: Calanus finmarchicus comp20855_c3_seq20 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 4.632e-3 Identity = 16/35 (45.71%), Postives = 24/35 (68.57%), Query Frame = 0 Query: 14 VDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGE 48 V +S +AW ++GDI A++++ LV L TGCGE Sbjct: 12 VSDSERAWVYVTGDIMAPALENVGNLVRLPTGCGE 116
BLAST of EMLSAG00000007823 vs. L. salmonis peptides
Match: EMLSAP00000007823 (pep:novel supercontig:LSalAtl2s:LSalAtl2s458:384698:385135:1 gene:EMLSAG00000007823 transcript:EMLSAT00000007823 description:"snap_masked-LSalAtl2s458-processed-gene-3.8") HSP 1 Score: 194.897 bits (494), Expect = 1.911e-65 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 Query: 1 MALEDTILPKNNLVDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGEDEDYSIWGPKSSEEDGLMWITAYVKALSYASNYIDVDLNILQKSVIWII 97 MALEDTILPKNNLVDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGEDEDYSIWGPKSSEEDGLMWITAYVKALSYASNYIDVDLNILQKSVIWII Sbjct: 1 MALEDTILPKNNLVDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGEDEDYSIWGPKSSEEDGLMWITAYVKALSYASNYIDVDLNILQKSVIWII 97
BLAST of EMLSAG00000007823 vs. L. salmonis peptides
Match: EMLSAP00000002856 (pep:novel supercontig:LSalAtl2s:LSalAtl2s164:1240:6494:1 gene:EMLSAG00000002856 transcript:EMLSAT00000002856 description:"maker-LSalAtl2s164-augustus-gene-0.10") HSP 1 Score: 127.872 bits (320), Expect = 2.662e-36 Identity = 74/146 (50.68%), Postives = 83/146 (56.85%), Query Frame = 0 Query: 1 MALEDTILPKNNLVDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGE------------------------------------------------DEDYSIWGPKSSEEDGLMWITAY-VKALSYASNYIDVDLNILQKSVIWII 97 +ALEDTILP+ NLVD+SV+AWFGISGDI AVK+LDGLV L TGCGE D YSIWGPKSSEE+G MW+TAY VKA S AS YIDVD+ +LQKSV WII Sbjct: 131 LALEDTILPETNLVDDSVRAWFGISGDIMAPAVKNLDGLVALPTGCGEQTMIRMVPNIYLLDYLKSIGKSLPSLESKAKGYIQTGYDRQNRKFRHRDGGYSIWGPKSSEEEGSMWLTAYVVKAFSQASKYIDVDMKLLQKSVKWII 276
BLAST of EMLSAG00000007823 vs. Select Arthropod Genomes
Match: gb|EEC20000.1| (alpha-macroglobulin, putative, partial [Ixodes scapularis]) HSP 1 Score: 48.9062 bits (115), Expect = 3.208e-7 Identity = 37/137 (27.01%), Postives = 61/137 (44.53%), Query Frame = 0 Query: 5 DTILPKNNLVDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGE-----------------------------------------------DEDYSIWGPKSSEEDGLMWITAY-VKALSYASNYIDVDLNILQKSV 93 D +LP ++LV+ S +A+ ++GDI G AV++LD LV + TGCGE D YS +G +S+ G M++T++ VK+ A Y+ +D L++S+ Sbjct: 796 DLVLP-DDLVEGSARAYVSVTGDIMGPAVQNLDSLVRVPTGCGEQNMIKFTPNVYVLDYLKATGKHEEDIEKKAVENLKTGYQRQMKYRHPDGSYSAFG--TSDSTGSMFLTSFVVKSFKQAEKYVPIDAANLKESI 929
BLAST of EMLSAG00000007823 vs. nr
Match: gi|669193673|gb|AII16542.1| (alpha-2-macroglobulin, partial [Paracyclopina nana]) HSP 1 Score: 80.4925 bits (197), Expect = 9.952e-16 Identity = 46/143 (32.17%), Postives = 68/143 (47.55%), Query Frame = 0 Query: 3 LEDTILPKNNLVDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGE------------------------------------------------DEDYSIWGPKSSEEDGLMWITAY-VKALSYASNYIDVDLNILQKSVIWI 96 LED ++P +NLV++S +AW ++GDI ++ +LD LV + GCGE D YS+WGP+ + G MW+TA+ VKA S ++ YIDVDLN L++S W+ Sbjct: 1215 LEDIVVPADNLVEDSARAWVTVTGDILAPSLSNLDTLVQMPHGCGEQNMISMVPNIYVVKYLEGTNQDKPELIAKAKKFMKSGYDRQNENYRHSDGSYSVWGPRDETQKGSMWLTAFVVKAFSQSAKYIDVDLNQLRQSKEWL 1357
BLAST of EMLSAG00000007823 vs. nr
Match: gi|1050367559|gb|OCT69761.1| (hypothetical protein XELAEV_18036685mg [Xenopus laevis]) HSP 1 Score: 55.4546 bits (132), Expect = 7.881e-7 Identity = 32/96 (33.33%), Postives = 56/96 (58.33%), Query Frame = 0 Query: 12 NLVDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCGE----------DEDYSIWGPKSSEEDGLMWITAYV-KALSYASNYIDVDLNILQKSVIWI 96 N++ +S +A+ + GD+ G A+++LD L+ + GCGE D YS +G S+++G W+TA+V K+ + A YI +D + L +S W+ Sbjct: 819 NILKDSERAYVTVLGDLMGTALQNLDRLLAMPYGCGEQNMGTRGKRDDGSYSAFG--QSDKEGNTWLTAFVLKSFNKARPYIFIDESHLNQSFSWL 912
BLAST of EMLSAG00000007823 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1177_size57108-snap-gene-0.11 (protein:Tk09746 transcript:maker-scaffold1177_size57108-snap-gene-0.11-mRNA-1 annotation:"alpha-2-macroglobiln splicing variant 1 precursor") HSP 1 Score: 50.8322 bits (120), Expect = 4.164e-9 Identity = 31/132 (23.48%), Postives = 59/132 (44.70%), Query Frame = 0 Query: 14 VDNSVQAWFGISGDITGHAVKSLDGLVGLSTGCG-----------------------------------------------EDEDYSIWGPKSSEEDGLMWITAYV-KALSYASNYIDVDLNILQKSVIWII 97 V+ S +AWF ++GDI ++ +L+ LV L TGCG ED YS+WGP+ ++ G +W++++V K A+ ++++D+ + +++ WI+ Sbjct: 1242 VEGSERAWFMVTGDIMAPSLANLESLVQLPTGCGEQNMIGMAPNVYLLEYMKGSGKADPKLEVQAKRNMKTGFEREQKFRHEDGSYSVWGPQ--DKVGSIWLSSFVTKVFVQATQFVELDMQNIGQTIQWIL 1371 The following BLAST results are available for this feature:
BLAST of EMLSAG00000007823 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 1
BLAST of EMLSAG00000007823 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 17
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BLAST of EMLSAG00000007823 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000007823 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000007823 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000007823 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 2
BLAST of EMLSAG00000007823 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s458:384698..385135+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000007823-690589 ID=EMLSAG00000007823-690589|Name=EMLSAG00000007823|organism=Lepeophtheirus salmonis|type=gene|length=438bp|location=Sequence derived from alignment at LSalAtl2s458:384698..385135+ (Lepeophtheirus salmonis)back to top Add to Basket
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