EMLSAG00000008229, EMLSAG00000008229-690995 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000008229
Unique Name	EMLSAG00000008229-690995
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000008229 vs. GO
Match: - (symbol:rpl-27 species:6239 "Caenorhabditis elegans" [GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP] [GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:KIYKPGK GeneTree:ENSGT00390000010721 EMBL:U89308 EMBL:FO080940 RefSeq:NP_490905.1 UniGene:Cel.19696 ProteinModelPortal:P91914 SMR:P91914 STRING:6239.C53H9.1.2 PaxDb:P91914 EnsemblMetazoa:C53H9.1.1 EnsemblMetazoa:C53H9.1.2 GeneID:171750 KEGG:cel:CELE_C53H9.1 UCSC:C53H9.1.1 CTD:171750 WormBase:C53H9.1 InParanoid:P91914 NextBio:872543 PRO:PR:P91914 Uniprot:P91914)

HSP 1 Score: 51.9878 bits (123), Expect = 1.506e-8
Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K FLKV+ Y HL+ T Y+V +   + +INKE LK     +  +  V   FE++  +G +K F  +LR 
Sbjct:   67 KLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. GO
Match: - (symbol:rpl-27 "60S ribosomal protein L27" species:6239 "Caenorhabditis elegans" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:KIYKPGK GeneTree:ENSGT00390000010721 EMBL:U89308 EMBL:FO080940 RefSeq:NP_490905.1 UniGene:Cel.19696 ProteinModelPortal:P91914 SMR:P91914 STRING:6239.C53H9.1.2 PaxDb:P91914 EnsemblMetazoa:C53H9.1.1 EnsemblMetazoa:C53H9.1.2 GeneID:171750 KEGG:cel:CELE_C53H9.1 UCSC:C53H9.1.1 CTD:171750 WormBase:C53H9.1 InParanoid:P91914 NextBio:872543 PRO:PR:P91914 Uniprot:P91914)

HSP 1 Score: 51.9878 bits (123), Expect = 1.506e-8
Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K FLKV+ Y HL+ T Y+V +   + +INKE LK     +  +  V   FE++  +G +K F  +LR 
Sbjct:   67 KLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136

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BLAST of EMLSAG00000008229 vs. GO
Match: - (symbol:rpl27 "ribosomal protein L27" species:7955 "Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 Pfam:PF00467 ZFIN:ZDB-GENE-030131-4343 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:KIYKPGK GeneTree:ENSGT00390000010721 CTD:6155 HOVERGEN:HBG050005 OrthoDB:EOG7J181Z TreeFam:TF314648 EMBL:BC045965 RefSeq:NP_956018.1 RefSeq:XP_005163985.1 UniGene:Dr.75716 ProteinModelPortal:Q7ZV82 STRING:7955.ENSDARP00000018737 PRIDE:Q7ZV82 Ensembl:ENSDART00000020311 Ensembl:ENSDART00000140518 GeneID:325618 KEGG:dre:325618 InParanoid:Q7ZV82 NextBio:20809388 PRO:PR:Q7ZV82 Bgee:Q7ZV82 Uniprot:Q7ZV82)

HSP 1 Score: 50.8322 bits (120), Expect = 4.036e-8
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +     +   +     FE++  +G +K F Q+LR 
Sbjct:   67 KIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

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BLAST of EMLSAG00000008229 vs. GO
Match: - (symbol:RPL27 "60S ribosomal protein L27" species:9615 "Canis lupus familiaris" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 CTD:6155 HOVERGEN:HBG050005 EMBL:AJ388516 RefSeq:NP_001003102.2 UniGene:Cfa.28035 ProteinModelPortal:Q9XSU7 STRING:9615.ENSCAFP00000021561 PaxDb:Q9XSU7 GeneID:403688 KEGG:cfa:403688 InParanoid:Q9XSU7 NextBio:20817192 Uniprot:Q9XSU7)

HSP 1 Score: 50.8322 bits (120), Expect = 4.360e-8
Identity = 25/70 (35.71%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +     +   +     FE+K  +G +K F Q+LR 
Sbjct:   67 KIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEEKYKTGKNKWFFQKLRF 136

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BLAST of EMLSAG00000008229 vs. GO
Match: - (symbol:RPL27 "60S ribosomal protein L27" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 GO:GO:0006412 EMBL:CH471152 EMBL:AC055866 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR10497 UniGene:Hs.514196 UniGene:Hs.660076 HGNC:HGNC:10328 ProteinModelPortal:K7EQQ9 SMR:K7EQQ9 PRIDE:K7EQQ9 Ensembl:ENST00000590864 ArrayExpress:K7EQQ9 Uniprot:K7EQQ9)

HSP 1 Score: 49.6766 bits (117), Expect = 6.229e-8
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +     +   +     FE++  +G +K F Q+LR 
Sbjct:   11 KIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 80

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BLAST of EMLSAG00000008229 vs. GO
Match: - (symbol:RPL27 "60S ribosomal protein L27" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 GO:GO:0006412 EMBL:AC055866 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR10497 HGNC:HGNC:10328 ProteinModelPortal:K7ELC7 Ensembl:ENST00000586277 Uniprot:K7ELC7)

HSP 1 Score: 50.0618 bits (118), Expect = 7.392e-8
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +     +   +     FE++  +G +K F Q+LR 
Sbjct:   75 KIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 144

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BLAST of EMLSAG00000008229 vs. GO
Match: - (symbol:RPL27 "60S ribosomal protein L27" species:9823 "Sus scrofa" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR10497 OMA:KIYKPGK GeneTree:ENSGT00390000010721 OrthoDB:EOG7J181Z TreeFam:TF314648 EMBL:FP340289 Ensembl:ENSSSCT00000026116 ArrayExpress:I3LIX1 Uniprot:I3LIX1)

HSP 1 Score: 50.0618 bits (118), Expect = 8.204e-8
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +     +   +     FE++  +G +K F Q+LR 
Sbjct:   66 KIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 135

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BLAST of EMLSAG00000008229 vs. GO
Match: - (symbol:Rpl27 "60S ribosomal protein L27" species:10116 "Rattus norvegicus" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 RGD:621192 Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:KIYKPGK GeneTree:ENSGT00390000010721 CTD:6155 HOVERGEN:HBG050005 OrthoDB:EOG7J181Z TreeFam:TF314648 EMBL:X07424 EMBL:BC058474 EMBL:BC091566 PIR:S00401 RefSeq:NP_071959.1 UniGene:Rn.1254 ProteinModelPortal:P61354 SMR:P61354 BioGrid:249021 IntAct:P61354 MINT:MINT-4578026 STRING:10116.ENSRNOP00000028060 PaxDb:P61354 PRIDE:P61354 Ensembl:ENSRNOT00000028060 GeneID:64306 KEGG:rno:64306 UCSC:RGD:621192 InParanoid:P61354 NextBio:612950 PRO:PR:P61354 Genevestigator:P61354 Uniprot:P61354)

HSP 1 Score: 50.0618 bits (118), Expect = 8.483e-8
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +     +   +     FE++  +G +K F Q+LR 
Sbjct:   67 KIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. GO
Match: - (symbol:Rpl27 "ribosomal protein L27" species:10116 "Rattus norvegicus" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 RGD:621192 Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:KIYKPGK GeneTree:ENSGT00390000010721 CTD:6155 HOVERGEN:HBG050005 OrthoDB:EOG7J181Z TreeFam:TF314648 EMBL:X07424 EMBL:BC058474 EMBL:BC091566 PIR:S00401 RefSeq:NP_071959.1 UniGene:Rn.1254 ProteinModelPortal:P61354 SMR:P61354 BioGrid:249021 IntAct:P61354 MINT:MINT-4578026 STRING:10116.ENSRNOP00000028060 PaxDb:P61354 PRIDE:P61354 Ensembl:ENSRNOT00000028060 GeneID:64306 KEGG:rno:64306 UCSC:RGD:621192 InParanoid:P61354 NextBio:612950 PRO:PR:P61354 Genevestigator:P61354 Uniprot:P61354)

HSP 1 Score: 50.0618 bits (118), Expect = 8.483e-8
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +     +   +     FE++  +G +K F Q+LR 
Sbjct:   67 KIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. GO
Match: - (symbol:RPL27 "60S ribosomal protein L27" species:9823 "Sus scrofa" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 InterPro:IPR005824 SMART:SM00739 KO:K02901 PANTHER:PTHR10497 CTD:6155 HOVERGEN:HBG050005 EMBL:DQ629167 RefSeq:NP_001090948.1 UniGene:Ssc.13574 ProteinModelPortal:A1XQU5 SMR:A1XQU5 PRIDE:A1XQU5 GeneID:100037995 KEGG:ssc:100037995 ArrayExpress:A1XQU5 Uniprot:A1XQU5)

HSP 1 Score: 50.0618 bits (118), Expect = 8.483e-8
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +     +   +     FE++  +G +K F Q+LR 
Sbjct:   67 KIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

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BLAST of EMLSAG00000008229 vs. C. finmarchicus
Match: gi|592788505|gb|GAXK01166063.1| (TSA: Calanus finmarchicus comp166_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 45.4394 bits (106), Expect = 1.096e-6
Identity = 22/60 (36.67%), Postives = 35/60 (58.33%), Query Frame = 0

Query:   25 YNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            YNH++ T Y+V I   + +INKE++K  M  K     V   FE++  SG ++ F Q+L+ 
Sbjct:  257 YNHVMPTRYSVDISFDKTNINKELMKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF 436

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BLAST of EMLSAG00000008229 vs. C. finmarchicus
Match: gi|592788506|gb|GAXK01166062.1| (TSA: Calanus finmarchicus comp166_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.4394 bits (106), Expect = 1.254e-6
Identity = 22/60 (36.67%), Postives = 35/60 (58.33%), Query Frame = 0

Query:   25 YNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            YNH++ T Y+V I   + +INKE++K  M  K     V   FE++  SG ++ F Q+L+ 
Sbjct:  257 YNHVMPTRYSVDISFDKTNINKELMKDPMKKKKARNMVRTKFEERYKSGKNRWFFQKLKF 436

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BLAST of EMLSAG00000008229 vs. C. finmarchicus
Match: gi|592946265|gb|GAXK01012288.1| (TSA: Calanus finmarchicus comp3876908_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 37.7354 bits (86), Expect = 9.919e-4
Identity = 20/60 (33.33%), Postives = 31/60 (51.67%), Query Frame = 0

Query:   25 YNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            +NHL+ T Y+V I      I ++I+      K   + V   F+D+ TSG +K F  +LR 
Sbjct:   44 FNHLMPTRYSVEIDFKPAGITQDIMNNDGKRKEARKAVKTLFQDRYTSGKNKWFFSKLRF 223

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BLAST of EMLSAG00000008229 vs. C. finmarchicus
Match: gi|592763531|gb|GAXK01191037.1| (TSA: Calanus finmarchicus comp2172724_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 31.187 bits (69), Expect = 2.627e-1
Identity = 19/46 (41.30%), Postives = 27/46 (58.70%), Query Frame = 0

Query:   42 ESINKEILKGIMNMKNTIQHVP-----YDFEDKNTSGNSKCFVQRL 82
            ESINK++L     +  TIQ  P      DFE ++T+GNS+ F + L
Sbjct:    7 ESINKKMLN---ELDKTIQSWPKEAQFADFETESTAGNSEIFTKTL 135

[Close]

BLAST of EMLSAG00000008229 vs. C. finmarchicus
Match: gi|592763533|gb|GAXK01191035.1| (TSA: Calanus finmarchicus comp2172724_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.187 bits (69), Expect = 2.693e-1
Identity = 19/46 (41.30%), Postives = 27/46 (58.70%), Query Frame = 0

Query:   42 ESINKEILKGIMNMKNTIQHVP-----YDFEDKNTSGNSKCFVQRL 82
            ESINK++L     +  TIQ  P      DFE ++T+GNS+ F + L
Sbjct:    7 ESINKKMLN---ELDKTIQSWPKEAQFADFETESTAGNSEIFTKTL 135

[Close]

BLAST of EMLSAG00000008229 vs. C. finmarchicus
Match: gi|592795220|gb|GAXK01159348.1| (TSA: Calanus finmarchicus comp1598536_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 27.335 bits (59), Expect = 7.645e+0
Identity = 18/58 (31.03%), Postives = 33/58 (56.90%), Query Frame = 0

Query:   30 LTSYNVGIKLFEESINKEILKGIMN------MKNT-----IQHVPYDFEDKNTSGNSK 76
            +T+  VGI +F  +IN+ ++KG ++      M+N+     I++VP D +    SG+ K
Sbjct: 1951 VTTRKVGICMFTHTINQALMKGQLHLETKRIMRNSNHYSDIENVPVDEKGCLGSGDGK 2124

[Close]

BLAST of EMLSAG00000008229 vs. L. salmonis peptides
Match: EMLSAP00000008229 (pep:novel supercontig:LSalAtl2s:LSalAtl2s496:465796:466133:-1 gene:EMLSAG00000008229 transcript:EMLSAT00000008229 description:"maker-LSalAtl2s496-snap-gene-4.4")

HSP 1 Score: 172.17 bits (435), Expect = 6.028e-57
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0

Query:    1 MGETMRSGRFLVVVKVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            MGETMRSGRFLVVVKVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL
Sbjct:    1 MGETMRSGRFLVVVKVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84

[Close]

BLAST of EMLSAG00000008229 vs. L. salmonis peptides
Match: EMLSAP00000005005 (pep:novel supercontig:LSalAtl2s:LSalAtl2s260:403367:403765:1 gene:EMLSAG00000005005 transcript:EMLSAT00000005005 description:"augustus_masked-LSalAtl2s260-processed-gene-4.5")

HSP 1 Score: 81.2629 bits (199), Expect = 7.390e-21
Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K FLKVL YNHL+ T YNV IK  +ESINKE+LK  M  K   Q V  DFE+K  SGNSK F QRLR 
Sbjct:   63 KIKPFLKVLNYNHLMPTRYNVDIKFDKESINKEVLKDPMKKKKARQLVRNDFEEKYKSGNSKWFFQRLRF 132

[Close]

BLAST of EMLSAG00000008229 vs. SwissProt
Match: gi|2829752|sp|P91914.1|RL27_CAEEL (RecName: Full=60S ribosomal protein L27)

HSP 1 Score: 51.9878 bits (123), Expect = 6.323e-9
Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K FLKV+ Y HL+ T Y+V +   + +INKE LK     +  +  V   FE++  +G +K F  +LR 
Sbjct:   67 KLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. SwissProt
Match: gi|47117189|sp|Q7ZV82.3|RL27_DANRE (RecName: Full=60S ribosomal protein L27)

HSP 1 Score: 50.8322 bits (120), Expect = 1.876e-8
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +     +   +     FE++  +G +K F Q+LR 
Sbjct:   67 KIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. SwissProt
Match: gi|62901064|sp|Q9XSU7.3|RL27_CANFA (RecName: Full=60S ribosomal protein L27)

HSP 1 Score: 50.8322 bits (120), Expect = 2.043e-8
Identity = 25/70 (35.71%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +     +   +     FE+K  +G +K F Q+LR 
Sbjct:   67 KIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEEKYKTGKNKWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. SwissProt
Match: gi|47117269|sp|Q90YU1.3|RL27_ICTPU (RecName: Full=60S ribosomal protein L27)

HSP 1 Score: 50.447 bits (119), Expect = 2.666e-8
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +     +   +     FE++  +G +K F Q+LR 
Sbjct:   67 KIKAFVKVFNYNHLMPTRYSVDIPLDKTIVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. SwissProt
Match: gi|47117099|sp|P61356.2|RL27_BOVIN (RecName: Full=60S ribosomal protein L27 >gi|47117100|sp|P61357.2|RL27_CERNI RecName: Full=60S ribosomal protein L27 >gi|47117101|sp|P61358.2|RL27_MOUSE RecName: Full=60S ribosomal protein L27 >gi|47117737|sp|P61354.2|RL27_RAT RecName: Full=60S ribosomal protein L27 >gi|47117772|sp|P61353.2|RL27_HUMAN RecName: Full=60S ribosomal protein L27 >gi|47117773|sp|P61355.2|RL27_CHICK RecName: Full=60S ribosomal protein L27 >gi|75077221|sp|Q4R8Z4.1|RL27_MACFA RecName: Full=60S ribosomal protein L27 >gi|158514031|sp|A1XQU5.1|RL27_PIG RecName: Full=60S ribosomal protein L27)

HSP 1 Score: 50.0618 bits (118), Expect = 4.259e-8
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +     +   +     FE++  +G +K F Q+LR 
Sbjct:   67 KIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. SwissProt
Match: gi|47117102|sp|P61359.2|RL27_HIPCM (RecName: Full=60S ribosomal protein L27 [Hippocampus comes])

HSP 1 Score: 49.2914 bits (116), Expect = 7.564e-8
Identity = 24/70 (34.29%), Postives = 39/70 (55.71%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV  YNHL+ T Y+V I L +  +NK++ +         +     FE++  +G +K F Q+LR 
Sbjct:   67 KIKAFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKSKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. Select Arthropod Genomes
Match: gb|KFM83405.1| (60S ribosomal protein L27, partial [Stegodyphus mimosarum])

HSP 1 Score: 56.6102 bits (135), Expect = 4.723e-11
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KVL YNHL+ T Y V I+  +  +NKE+LK     +   + V   FE++  +G S+ F Q+LR 
Sbjct:   67 KIKPFVKVLNYNHLMPTRYMVDIQFDKSIVNKEVLKDPAKRRKARRDVKAKFEERYKTGKSRWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. Select Arthropod Genomes
Match: gb|KPM04239.1| (60S ribosomal protein L27-like protein [Sarcoptes scabiei])

HSP 1 Score: 47.7506 bits (112), Expect = 1.562e-7
Identity = 30/84 (35.71%), Postives = 45/84 (53.57%), Query Frame = 0

Query:    1 MGETMRSGRFLVVVKVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            MG+  RS R     ++K FLKV+ YNHL+ T YN  + L E++  KEI+K     +   Q +    E++  SG  + F  +LR 
Sbjct:   57 MGKKKRSKR----SRIKPFLKVVNYNHLMPTRYNFELTL-EKTDAKEIVKDQAARRKARQEIRCKMEERYKSGKDQWFFTKLRF 135

[Close]

BLAST of EMLSAG00000008229 vs. Select Arthropod Genomes
Match: gb|EEC05422.1| (60S ribosomal protein L27, putative [Ixodes scapularis])

HSP 1 Score: 47.7506 bits (112), Expect = 2.110e-7
Identity = 25/70 (35.71%), Postives = 38/70 (54.29%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K FLKV  YNHL+ T Y V I+  +  +NKE  K     + + + V   FE++  +  +  F Q+LR 
Sbjct:   95 KIKPFLKVYNYNHLMPTRYMVEIQFDKSVVNKETWKDPAKRRKSRREVKAKFEERYKTRKNPWFFQKLRF 164

[Close]

BLAST of EMLSAG00000008229 vs. Select Arthropod Genomes
Match: XP_003251156.1 (PREDICTED: 60S ribosomal protein L27 [Apis mellifera])

HSP 1 Score: 46.595 bits (109), Expect = 4.120e-7
Identity = 28/70 (40.00%), Postives = 37/70 (52.86%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KVL YNHL+ T Y V   L  + +  + LK  M  K         FE+K  SG +K F Q+LR 
Sbjct:   67 KIKPFVKVLNYNHLMPTRYTVD--LHWDKVTPKDLKDPMKRKKIRFQTRVKFEEKYKSGKNKWFFQKLRF 134

[Close]

BLAST of EMLSAG00000008229 vs. Select Arthropod Genomes
Match: XP_003251155.1 (PREDICTED: 60S ribosomal protein L27 [Apis mellifera])

HSP 1 Score: 46.595 bits (109), Expect = 4.120e-7
Identity = 28/70 (40.00%), Postives = 37/70 (52.86%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KVL YNHL+ T Y V   L  + +  + LK  M  K         FE+K  SG +K F Q+LR 
Sbjct:   67 KIKPFVKVLNYNHLMPTRYTVD--LHWDKVTPKDLKDPMKRKKIRFQTRVKFEEKYKSGKNKWFFQKLRF 134

[Close]

BLAST of EMLSAG00000008229 vs. nr
Match: gi|225714122|gb|ACO12907.1| (60S ribosomal protein L27 [Lepeophtheirus salmonis] >gi|290561357|gb|ADD38079.1| 60S ribosomal protein L27 [Lepeophtheirus salmonis])

HSP 1 Score: 80.8777 bits (198), Expect = 8.652e-18
Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K FLKVL YNHL+ T YNV IK  +ESINKE+LK  M  K   Q V  DFE+K  SGNSK F QRLR 
Sbjct:   67 KIKPFLKVLNYNHLMPTRYNVDIKFDKESINKEVLKDPMKKKKARQLVRNDFEEKYKSGNSKWFFQRLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. nr
Match: gi|290462955|gb|ADD24525.1| (60S ribosomal protein L27 [Lepeophtheirus salmonis])

HSP 1 Score: 78.5666 bits (192), Expect = 5.478e-17
Identity = 42/68 (61.76%), Postives = 47/68 (69.12%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRL 82
            K+K FLKVL YNHL+ T YNV IK  +ESINKE+LK  M  K   Q V  DFE+K  SGNSK F QRL
Sbjct:   63 KIKPFLKVLNYNHLMPTRYNVDIKFDKESINKEVLKDPMKKKKARQLVRNDFEEKYKSGNSKWFFQRL 130

[Close]

BLAST of EMLSAG00000008229 vs. nr
Match: gi|225711028|gb|ACO11360.1| (60S ribosomal protein L27 [Caligus rogercresseyi])

HSP 1 Score: 67.0106 bits (162), Expect = 2.756e-12
Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K FLKVL YNH++   Y V  K  +E+INKE+LK  M  K   Q V  DFE K  +G++K F Q+LR 
Sbjct:   67 KIKPFLKVLNYNHMMPARYTVDTKFDKEAINKEVLKDPMKKKKARQIVRNDFESKYKAGDNKWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. nr
Match: gi|225718080|gb|ACO14886.1| (60S ribosomal protein L27 [Caligus clemensi])

HSP 1 Score: 66.6254 bits (161), Expect = 3.571e-12
Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K FLKVL YNH++ T Y V IK  +++INKE+LK  M  K   Q V  DFEDK   G++K F Q+LR 
Sbjct:   67 KIKPFLKVLNYNHMMPTRYVVDIKFEKDAINKEVLKDPMKKKKAKQIVRNDFEDKYKGGSNKWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. nr
Match: gi|196000761|ref|XP_002110248.1| (expressed hypothetical protein [Trichoplax adhaerens] >gi|190586199|gb|EDV26252.1| expressed hypothetical protein [Trichoplax adhaerens])

HSP 1 Score: 58.5362 bits (140), Expect = 4.720e-9
Identity = 30/84 (35.71%), Postives = 49/84 (58.33%), Query Frame = 0

Query:    1 MGETMRSGRFLVVVKVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            MG+   S R     K+K F+KV  YNHL+ T YNV +   ++ +NK++ +     K  +++V  +FED+  +G +K F Q+LR 
Sbjct:   57 MGKKRASKR----SKIKPFVKVFNYNHLMPTRYNVDMSFDKQVVNKDVFRDPALKKKAVRYVKANFEDRYKTGKNKWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. nr
Match: gi|675390508|gb|KFM83405.1| (60S ribosomal protein L27, partial [Stegodyphus mimosarum])

HSP 1 Score: 56.6102 bits (135), Expect = 2.311e-8
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KVL YNHL+ T Y V I+  +  +NKE+LK     +   + V   FE++  +G S+ F Q+LR 
Sbjct:   67 KIKPFVKVLNYNHLMPTRYMVDIQFDKSIVNKEVLKDPAKRRKARRDVKAKFEERYKTGKSRWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. nr
Match: gi|318086974|gb|ADV40079.1| (60S ribosomal protein L27, partial [Latrodectus hesperus])

HSP 1 Score: 56.6102 bits (135), Expect = 2.628e-8
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KVL YNHL+ T Y V I+  +  +NKE+LK     +   + V   FE++  +G S+ F Q+LR 
Sbjct:   67 KIKPFVKVLNYNHLMPTRYMVDIQFDKSIVNKEVLKDPAKRRKARRDVKAKFEERYKTGKSRWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. nr
Match: gi|1009533367|ref|XP_015903718.1| (PREDICTED: 60S ribosomal protein L27-like [Parasteatoda tepidariorum])

HSP 1 Score: 56.6102 bits (135), Expect = 2.864e-8
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KVL YNHL+ T Y V I+  +  +NKE+LK     +   + V   FE++  +G S+ F Q+LR 
Sbjct:   67 KIKPFVKVLNYNHLMPTRYMVDIQFDKSIVNKEVLKDPAKRRKARRDVKSKFEERYKTGKSRWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. nr
Match: gi|706002932|gb|AIW62543.1| (60S ribosomal protein L27, partial [Scytodes thoracica])

HSP 1 Score: 56.225 bits (134), Expect = 2.988e-8
Identity = 28/70 (40.00%), Postives = 41/70 (58.57%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KVL YNHL+ T Y V I   +  +NKE+LK     +   + +   FE+K  +G S+ F Q+LR 
Sbjct:   52 KIKPFVKVLNYNHLMPTRYMVDIPFDKSIVNKEVLKDPSKRRKARRDIKAKFEEKYKTGKSRWFFQKLRF 121

[Close]

BLAST of EMLSAG00000008229 vs. nr
Match: gi|11967855|emb|CAC19490.1| (putative ribosomal protein L27 [Stichodactyla helianthus])

HSP 1 Score: 56.6102 bits (135), Expect = 3.022e-8
Identity = 25/70 (35.71%), Postives = 46/70 (65.71%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K F+KV+ YNHL+ T Y+V + L +++INK+I + +   +  ++ +   FE++  +G +K F Q+LR 
Sbjct:   67 KIKPFVKVVNYNHLMPTRYSVDVPLDKQNINKDIFRDLALRRKALREIKSKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of EMLSAG00000008229 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1323_size47899-snap-gene-0.17 (protein:Tk03421 transcript:maker-scaffold1323_size47899-snap-gene-0.17-mRNA-1 annotation:"60s ribosomal protein l27")

HSP 1 Score: 55.4546 bits (132), Expect = 1.245e-11
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0

Query:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
            K+K FLKV+ YNH++ T Y+V I   + ++NKE LK  M  K     V   FE++  +G ++ F Q+LR 
Sbjct:   67 KIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136

The following BLAST results are available for this feature:

BLAST of EMLSAG00000008229 vs. GO
BLAST of EMLSAG00000008229 vs. C. finmarchicus
BLAST of EMLSAG00000008229 vs. L. salmonis peptides
BLAST of EMLSAG00000008229 vs. SwissProt
BLAST of EMLSAG00000008229 vs. Select Arthropod Genomes
BLAST of EMLSAG00000008229 vs. nr
BLAST of EMLSAG00000008229 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000008229 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25


Match Name	E-value	Identity	Description
-	1.506e-8	37.14	symbol:rpl-27 species:6239 "Caenorhabditis elegans...	[more]
-	1.506e-8	37.14	symbol:rpl-27 "60S ribosomal protein L27" species:...	[more]
-	4.036e-8	34.29	symbol:rpl27 "ribosomal protein L27" species:7955 ...	[more]
-	4.360e-8	35.71	symbol:RPL27 "60S ribosomal protein L27" species:9...	[more]
-	6.229e-8	34.29	symbol:RPL27 "60S ribosomal protein L27" species:9...	[more]
-	7.392e-8	34.29	symbol:RPL27 "60S ribosomal protein L27" species:9...	[more]
-	8.204e-8	34.29	symbol:RPL27 "60S ribosomal protein L27" species:9...	[more]
-	8.483e-8	34.29	symbol:Rpl27 "60S ribosomal protein L27" species:1...	[more]
-	8.483e-8	34.29	symbol:Rpl27 "ribosomal protein L27" species:10116...	[more]
-	8.483e-8	34.29	symbol:RPL27 "60S ribosomal protein L27" species:9...	[more]

Pages

BLAST of EMLSAG00000008229 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 6


Match Name	E-value	Identity	Description
gi\|592788505\|gb\|GAXK01166063.1\|	1.096e-6	36.67	TSA: Calanus finmarchicus comp166_c0_seq2 transcri...	[more]
gi\|592788506\|gb\|GAXK01166062.1\|	1.254e-6	36.67	TSA: Calanus finmarchicus comp166_c0_seq1 transcri...	[more]
gi\|592946265\|gb\|GAXK01012288.1\|	9.919e-4	33.33	TSA: Calanus finmarchicus comp3876908_c0_seq1 tran...	[more]
gi\|592763531\|gb\|GAXK01191037.1\|	2.627e-1	41.30	TSA: Calanus finmarchicus comp2172724_c0_seq3 tran...	[more]
gi\|592763533\|gb\|GAXK01191035.1\|	2.693e-1	41.30	TSA: Calanus finmarchicus comp2172724_c0_seq1 tran...	[more]
gi\|592795220\|gb\|GAXK01159348.1\|	7.645e+0	31.03	TSA: Calanus finmarchicus comp1598536_c0_seq1 tran...	[more]

BLAST of EMLSAG00000008229 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2


Match Name	E-value	Identity	Description
EMLSAP00000008229	6.028e-57	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s496:46579...	[more]
EMLSAP00000005005	7.390e-21	61.43	pep:novel supercontig:LSalAtl2s:LSalAtl2s260:40336...	[more]

BLAST of EMLSAG00000008229 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 6


Match Name	E-value	Identity	Description
gi\|2829752\|sp\|P91914.1\|RL27_CAEEL	6.323e-9	37.14	RecName: Full=60S ribosomal protein L27	[more]
gi\|47117189\|sp\|Q7ZV82.3\|RL27_DANRE	1.876e-8	34.29	RecName: Full=60S ribosomal protein L27	[more]
gi\|62901064\|sp\|Q9XSU7.3\|RL27_CANFA	2.043e-8	35.71	RecName: Full=60S ribosomal protein L27	[more]
gi\|47117269\|sp\|Q90YU1.3\|RL27_ICTPU	2.666e-8	34.29	RecName: Full=60S ribosomal protein L27	[more]
gi\|47117099\|sp\|P61356.2\|RL27_BOVIN	4.259e-8	34.29	RecName: Full=60S ribosomal protein L27 >gi\|471171...	[more]
gi\|47117102\|sp\|P61359.2\|RL27_HIPCM	7.564e-8	34.29	RecName: Full=60S ribosomal protein L27 [Hippocamp...	[more]

BLAST of EMLSAG00000008229 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 5


Match Name	E-value	Identity	Description
gb\|KFM83405.1\|	4.723e-11	40.00	60S ribosomal protein L27, partial [Stegodyphus mi...	[more]
gb\|KPM04239.1\|	1.562e-7	35.71	60S ribosomal protein L27-like protein [Sarcoptes ...	[more]
gb\|EEC05422.1\|	2.110e-7	35.71	60S ribosomal protein L27, putative [Ixodes scapul...	[more]
XP_003251156.1	4.120e-7	40.00	PREDICTED: 60S ribosomal protein L27 [Apis mellife...	[more]
XP_003251155.1	4.120e-7	40.00	PREDICTED: 60S ribosomal protein L27 [Apis mellife...	[more]

BLAST of EMLSAG00000008229 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|225714122\|gb\|ACO12907.1\|	8.652e-18	61.43	60S ribosomal protein L27 [Lepeophtheirus salmonis...	[more]
gi\|290462955\|gb\|ADD24525.1\|	5.478e-17	61.76	60S ribosomal protein L27 [Lepeophtheirus salmonis...	[more]
gi\|225711028\|gb\|ACO11360.1\|	2.756e-12	48.57	60S ribosomal protein L27 [Caligus rogercresseyi]	[more]
gi\|225718080\|gb\|ACO14886.1\|	3.571e-12	51.43	60S ribosomal protein L27 [Caligus clemensi]	[more]
gi\|196000761\|ref\|XP_002110248.1\|	4.720e-9	35.71	expressed hypothetical protein [Trichoplax adhaere...	[more]
gi\|675390508\|gb\|KFM83405.1\|	2.311e-8	40.00	60S ribosomal protein L27, partial [Stegodyphus mi...	[more]
gi\|318086974\|gb\|ADV40079.1\|	2.628e-8	40.00	60S ribosomal protein L27, partial [Latrodectus he...	[more]
gi\|1009533367\|ref\|XP_015903718.1\|	2.864e-8	40.00	PREDICTED: 60S ribosomal protein L27-like [Paraste...	[more]
gi\|706002932\|gb\|AIW62543.1\|	2.988e-8	40.00	60S ribosomal protein L27, partial [Scytodes thora...	[more]
gi\|11967855\|emb\|CAC19490.1\|	3.022e-8	35.71	putative ribosomal protein L27 [Stichodactyla heli...	[more]

Pages

BLAST of EMLSAG00000008229 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1


Match Name	E-value	Identity	Description
maker-scaffold1323_size47899-snap-gene-0.17	1.245e-11	40.00	protein:Tk03421 transcript:maker-scaffold1323_size...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s496	supercontig	LSalAtl2s496:465796..466133 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s496-snap-gene-4.4
Biotype	protein_coding
Evidence	IEA
Note	60S ribosomal protein L27 [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000008229 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000008229	EMLSAT00000008229-704076	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s496:465796..466133-

gene from alignment at LSalAtl2s496:465796..466133-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000008229-690995 ID=EMLSAG00000008229-690995|Name=EMLSAG00000008229|organism=Lepeophtheirus salmonis|type=gene|length=338bp|location=Sequence derived from alignment at LSalAtl2s496:465796..466133- (Lepeophtheirus salmonis)
ATGGGGGAAACTATGAGATCTGGAAGGTTCTTAGTGGTTGTCAGTGGACA
CTTAAACGGCTGSAAATCCATTATTGTCCGATCCCCAGATGAGAAAATGC
CAAAAAACCATTTATACACAAAAAAGAGGTCAAGTTTTTCCTGAAGGTTC
TCTGCTACAATCATTTGATACTTACTTCCTACAATGTGGGCATTAAGTTA
TTTGAGGAATCTATCAATAAAGAGATCCTTAAAGGCATTATGAATATGAA
AAATACGATACAGCATGTCCCATATGACTTCGAGGACAAGAACACGTCTG
GAAACAGCAAATGTTTCGTACAGAGGTTAAGATTATAA

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