EMLSAG00000008436, EMLSAG00000008436-691202 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000008436
Unique NameEMLSAG00000008436-691202
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000008436 vs. C. finmarchicus
Match: gi|592846227|gb|GAXK01111317.1| (TSA: Calanus finmarchicus comp53564_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 50.447 bits (119), Expect = 4.503e-8
Identity = 19/37 (51.35%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:   48 EDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFT 84
            ++P  YQY+YAV+D+Y+G NF+A E RDGYS    ++
Sbjct:  169 DEPAAYQYQYAVNDDYSGSNFQASEGRDGYSTSGSYS 279
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BLAST of EMLSAG00000008436 vs. C. finmarchicus
Match: gi|592846226|gb|GAXK01111318.1| (TSA: Calanus finmarchicus comp53564_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 50.0618 bits (118), Expect = 4.785e-8
Identity = 19/37 (51.35%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:   48 EDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFT 84
            ++P  YQY+YAV+D+Y+G NF+A E RDGYS    ++
Sbjct:  169 DEPAAYQYQYAVNDDYSGSNFQASEGRDGYSTSGSYS 279
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BLAST of EMLSAG00000008436 vs. C. finmarchicus
Match: gi|592846229|gb|GAXK01111315.1| (TSA: Calanus finmarchicus comp53564_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 50.447 bits (119), Expect = 4.950e-8
Identity = 19/37 (51.35%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:   48 EDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFT 84
            ++P  YQY+YAV+D+Y+G NF+A E RDGYS    ++
Sbjct:  223 DEPAAYQYQYAVNDDYSGSNFQASEGRDGYSTSGSYS 333
[Close]
BLAST of EMLSAG00000008436 vs. C. finmarchicus
Match: gi|592846228|gb|GAXK01111316.1| (TSA: Calanus finmarchicus comp53564_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 50.0618 bits (118), Expect = 5.175e-8
Identity = 19/37 (51.35%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:   48 EDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFT 84
            ++P  YQY+YAV+D+Y+G NF+A E RDGYS    ++
Sbjct:  223 DEPAAYQYQYAVNDDYSGSNFQASEGRDGYSTSGSYS 333
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BLAST of EMLSAG00000008436 vs. C. finmarchicus
Match: gi|592784431|gb|GAXK01170137.1| (TSA: Calanus finmarchicus comp342_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 46.9802 bits (110), Expect = 2.378e-6
Identity = 18/36 (50.00%), Postives = 25/36 (69.44%), Query Frame = 0 
Query:   49 DPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFT 84
            +P VY Y+Y VSD+Y+G NF+  E RDGY+    +T
Sbjct:  484 EPPVYNYQYGVSDDYSGANFQQAETRDGYATSGSYT 591
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BLAST of EMLSAG00000008436 vs. C. finmarchicus
Match: gi|592784429|gb|GAXK01170139.1| (TSA: Calanus finmarchicus comp342_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 2.702e-6
Identity = 18/36 (50.00%), Postives = 25/36 (69.44%), Query Frame = 0 
Query:   49 DPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFT 84
            +P VY Y+Y VSD+Y+G NF+  E RDGY+    +T
Sbjct:  338 EPPVYNYQYGVSDDYSGANFQQAETRDGYATSGSYT 445
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BLAST of EMLSAG00000008436 vs. C. finmarchicus
Match: gi|592784428|gb|GAXK01170140.1| (TSA: Calanus finmarchicus comp342_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 45.8246 bits (107), Expect = 3.817e-6
Identity = 18/36 (50.00%), Postives = 25/36 (69.44%), Query Frame = 0 
Query:   49 DPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFT 84
            +P VY Y+Y VSD+Y+G NF+  E RDGY+    +T
Sbjct:  279 EPPVYNYQYGVSDDYSGANFQQAETRDGYATSGSYT 386
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BLAST of EMLSAG00000008436 vs. C. finmarchicus
Match: gi|592778513|gb|GAXK01176055.1| (TSA: Calanus finmarchicus comp3854_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 1.218e-5
Identity = 17/35 (48.57%), Postives = 24/35 (68.57%), Query Frame = 0 
Query:   49 DPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCF 83
            +P +Y Y+Y VSD+Y+G NF  +E RDGYS    +
Sbjct:  176 EPALYAYQYGVSDDYSGANFAQEEQRDGYSTSGTY 280
[Close]
BLAST of EMLSAG00000008436 vs. C. finmarchicus
Match: gi|592778512|gb|GAXK01176056.1| (TSA: Calanus finmarchicus comp3854_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 43.1282 bits (100), Expect = 1.256e-5
Identity = 17/35 (48.57%), Postives = 24/35 (68.57%), Query Frame = 0 
Query:   49 DPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCF 83
            +P +Y Y+Y VSD+Y+G NF  +E RDGYS    +
Sbjct:  176 EPALYAYQYGVSDDYSGANFAQEEQRDGYSTSGTY 280
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BLAST of EMLSAG00000008436 vs. C. finmarchicus
Match: gi|592881786|gb|GAXK01076352.1| (TSA: Calanus finmarchicus comp624121_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 6.741e-5
Identity = 16/33 (48.48%), Postives = 23/33 (69.70%), Query Frame = 0 
Query:   48 EDPTVYQYRYAVSDEYTGLNFEADEARDGYSXL 80
            ++P+ Y Y Y V DEYTG NF A++  DG+S +
Sbjct:   51 DEPSPYNYEYGVHDEYTGTNFNAEQHGDGHSNV 149
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BLAST of EMLSAG00000008436 vs. L. salmonis peptides
Match: EMLSAP00000008436 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5171:2891:3319:-1 gene:EMLSAG00000008436 transcript:EMLSAT00000008436 description:"snap-LSalAtl2s5171-processed-gene-0.3")

HSP 1 Score: 246.899 bits (629), Expect = 4.306e-85
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 
Query:    1 MKSFISLSTLLTVAFADHPAPAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFTPRPRKHCLLQSFFMNKNACISIHKASRIKTFVFFIQI 121
            MKSFISLSTLLTVAFADHPAPAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFTPRPRKHCLLQSFFMNKNACISIHKASRIKTFVFFIQI
Sbjct:    1 MKSFISLSTLLTVAFADHPAPAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFTPRPRKHCLLQSFFMNKNACISIHKASRIKTFVFFIQI 121
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BLAST of EMLSAG00000008436 vs. L. salmonis peptides
Match: EMLSAP00000001415 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1241:84693:85124:1 gene:EMLSAG00000001415 transcript:EMLSAT00000001415 description:"augustus-LSalAtl2s1241-processed-gene-0.12")

HSP 1 Score: 108.997 bits (271), Expect = 7.657e-31
Identity = 57/75 (76.00%), Postives = 63/75 (84.00%), Query Frame = 0 
Query:    5 ISLSTLLTVAFADHPAPAP-YHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            ++LS LL VA +   APA  Y P+PYHPAPAYKPAPYHPAPSYKEDP +YQY+YAVSDEY GLNF ADEARDGYS
Sbjct:    1 MALSALLAVAMS---APADTYRPAPYHPAPAYKPAPYHPAPSYKEDPAIYQYQYAVSDEYAGLNFGADEARDGYS 72
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BLAST of EMLSAG00000008436 vs. L. salmonis peptides
Match: EMLSAP00000009004 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5650:4067:4550:1 gene:EMLSAG00000009004 transcript:EMLSAT00000009004 description:"snap-LSalAtl2s5650-processed-gene-0.3")

HSP 1 Score: 95.9005 bits (237), Expect = 3.743e-26
Identity = 67/80 (83.75%), Postives = 70/80 (87.50%), Query Frame = 0 
Query:    1 MKSFISLSTLLTVAFADH--PAPAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            MKSFI+LS LL +AFADH  PAP    P+PY PAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEY GLNFEADEARDGYS
Sbjct:    1 MKSFIALSALLAIAFADHPAPAPYHPAPAPYXPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYXGLNFEADEARDGYS 80
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BLAST of EMLSAG00000008436 vs. L. salmonis peptides
Match: EMLSAP00000009891 (pep:novel supercontig:LSalAtl2s:LSalAtl2s643:441816:442099:1 gene:EMLSAG00000009891 transcript:EMLSAT00000009891 description:"augustus-LSalAtl2s643-processed-gene-4.6")

HSP 1 Score: 89.7373 bits (221), Expect = 3.046e-24
Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 0 
Query:    1 MKSFISLSTLLTVAFADHPAPAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            MK+FI+L+T L +  ADH AP  YHPSP         APYHPAPSY E P  YQY+YA+ D+Y+G+NF ADEARDGY+
Sbjct:    1 MKTFIALTTFLALVVADHTAP--YHPSP---------APYHPAPSYNEVPAPYQYQYAIKDDYSGVNFGADEARDGYA 67
[Close]
BLAST of EMLSAG00000008436 vs. L. salmonis peptides
Match: EMLSAP00000001414 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1241:78790:79435:1 gene:EMLSAG00000001414 transcript:EMLSAT00000001414 description:"augustus-LSalAtl2s1241-processed-gene-0.11")

HSP 1 Score: 91.2781 bits (225), Expect = 6.473e-24
Identity = 60/92 (65.22%), Postives = 67/92 (72.83%), Query Frame = 0 
Query:    1 MKSFISLSTLLTVAFADHPAPA--------PYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFT 84
            MKSFI++S LL VA +   APA           P+PYHPAP YKPAPYHPAPSYKEDP VYQY+YAVSDEY GLNF ADEARDGYS    ++
Sbjct:    1 MKSFIAVSALLAVAMS---APADPYRPAPXHPAPAPYHPAPTYKPAPYHPAPSYKEDPAVYQYQYAVSDEYAGLNFGADEARDGYSTQGKYS 89
[Close]
BLAST of EMLSAG00000008436 vs. L. salmonis peptides
Match: EMLSAP00000003353 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1834:174757:175847:1 gene:EMLSAG00000003353 transcript:EMLSAT00000003353 description:"maker-LSalAtl2s1834-augustus-gene-0.3")

HSP 1 Score: 72.0182 bits (175), Expect = 2.087e-16
Identity = 38/61 (62.30%), Postives = 46/61 (75.41%), Query Frame = 0 
Query:   21 PAPYHPSP--YHPAPA-YKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            PAPYHP+P  YH AP  +K +PYH A SY + P VYQY YAV+D+Y+G NF A+E RDGYS
Sbjct:  160 PAPYHPAPPTYHSAPVVHKSSPYHAAESYADTPAVYQYGYAVADDYSGTNFAANENRDGYS 220
[Close]
BLAST of EMLSAG00000008436 vs. L. salmonis peptides
Match: EMLSAP00000001413 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1241:39014:39687:-1 gene:EMLSAG00000001413 transcript:EMLSAT00000001413 description:"snap-LSalAtl2s1241-processed-gene-0.18")

HSP 1 Score: 69.707 bits (169), Expect = 3.826e-16
Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 0 
Query:    1 MKSFISLSTLLTVAFADHPAPA-PYHPSPYHPAPAYKPAPYHPAP---SYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            MKSF++LS LL VA +   APA PY P+PYHPAPA       P     +YKE+P  YQY+YAVSDEY GLNF ADEARDGYS
Sbjct:    1 MKSFVALSALLAVAMS---APADPYRPAPYHPAPAPYHPAPAPYHAAPTYKEEPAAYQYQYAVSDEYAGLNFGADEARDGYS 79
[Close]
BLAST of EMLSAG00000008436 vs. L. salmonis peptides
Match: EMLSAP00000001416 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1241:8830:11413:1 gene:EMLSAG00000001416 transcript:EMLSAT00000001416 description:"snap-LSalAtl2s1241-processed-gene-0.27")

HSP 1 Score: 67.781 bits (164), Expect = 1.588e-15
Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0 
Query:    1 MKSFISLSTLLTVAFADHPAPAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            MKSF++LS LL VA +   APA  +    +      PAPYH AP YKE+P  YQY+YAVSDEY GLNF ADEARDGYS
Sbjct:    1 MKSFVALSALLAVAIS---APADLYRPAPYHPA---PAPYHAAPXYKEEPAXYQYQYAVSDEYAGLNFGADEARDGYS 72
[Close]
BLAST of EMLSAG00000008436 vs. L. salmonis peptides
Match: EMLSAP00000004844 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2560:13440:35521:-1 gene:EMLSAG00000004844 transcript:EMLSAT00000004844 description:"augustus-LSalAtl2s2560-processed-gene-0.2")

HSP 1 Score: 65.4698 bits (158), Expect = 3.215e-14
Identity = 47/124 (37.90%), Postives = 59/124 (47.58%), Query Frame = 0 
Query:    4 FISLSTLLTVAFAD----------HPAPA-----------------------PYH-------PSPYHPAP-AYKPAPYHPAPSYK--------EDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            FI++STLL V  AD          H AP+                       PYH       P+PYH  P  ++P PYHPAP++K        + P VYQY YAV+D+Y G NF  +E RDGYS
Sbjct:   55 FITISTLLAVVSADQSSHQTIQHGHSAPSHTSLHKPHGSHRHAVHVPVHQSPPYHSSPILXKPAPYHSVPIVHQPTPYHPAPTHKSPYHAESYDTPAVYQYGYAVADDYAGTNFAQNENRDGYS 178
[Close]
BLAST of EMLSAG00000008436 vs. L. salmonis peptides
Match: EMLSAP00000009892 (pep:novel supercontig:LSalAtl2s:LSalAtl2s643:493611:494175:1 gene:EMLSAG00000009892 transcript:EMLSAT00000009892 description:"augustus-LSalAtl2s643-processed-gene-4.8")

HSP 1 Score: 62.7734 bits (151), Expect = 1.207e-13
Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 0 
Query:    1 MKSFISLSTLLTVAFADHPAPAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFT 84
            MK+FI++S LL +A ADHPAP    P+PYHP           APSY E P  YQY+YAV D+Y+G+NF ADEARDGY+    +T
Sbjct:    1 MKTFIAVSALLALAIADHPAPYHPAPAPYHP-----------APSYNEVPAAYQYQYAVKDDYSGVNFGADEARDGYATKGSYT 73
[Close]
BLAST of EMLSAG00000008436 vs. nr
Match: gi|155966288|gb|ABU41097.1| (putative cuticle protein, partial [Lepeophtheirus salmonis])

HSP 1 Score: 83.1889 bits (204), Expect = 8.862e-18
Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 0 
Query:   34 AYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFT 84
            AYKPAPYHPAPSYKEDP VYQY+YAVSDEY GLNF ADEARDGYS    ++
Sbjct:   38 AYKPAPYHPAPSYKEDPAVYQYQYAVSDEYAGLNFGADEARDGYSTQGKYS 88
[Close]
BLAST of EMLSAG00000008436 vs. nr
Match: gi|155966279|gb|ABU41093.1| (BCS-1 protein, partial [Lepeophtheirus salmonis])

HSP 1 Score: 73.559 bits (179), Expect = 2.412e-14
Identity = 39/59 (66.10%), Postives = 43/59 (72.88%), Query Frame = 0 
Query:   26 PSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCFT 84
            P PY PA A    PYH APSYKE+P  YQY+YAVSDEY GLNF ADEARDGYS    ++
Sbjct:    9 PVPYPPALA----PYHAAPSYKEEPAAYQYQYAVSDEYAGLNFGADEARDGYSTQGKYS 63
[Close]
BLAST of EMLSAG00000008436 vs. nr
Match: gi|225714206|gb|ACO12949.1| (Cuticle protein 7 [Lepeophtheirus salmonis])

HSP 1 Score: 66.2402 bits (160), Expect = 1.849e-11
Identity = 38/75 (50.67%), Postives = 43/75 (57.33%), Query Frame = 0 
Query:    1 MKSFISLSTLLTVAFADHPAPAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARD 75
            M  FI   T L   F DHPAP   HP+PYH APAYKPAP      Y E P  Y ++Y VSD+Y+G  F A E  D
Sbjct:    1 MFHFIVACTFLASVFGDHPAP---HPAPYHQAPAYKPAP------YDESPKPYAFQYGVSDDYSGTKFTAQENSD 66
[Close]
BLAST of EMLSAG00000008436 vs. nr
Match: gi|290462725|gb|ADD24410.1| (Cuticle protein 18.6, isoform B [Lepeophtheirus salmonis])

HSP 1 Score: 56.9954 bits (136), Expect = 6.894e-8
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 0 
Query:    1 MKSFISLSTLLTVAFADH----PAPAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDG 76
            M   +  S LL   + DH    P+PAPYHP    PAP + PA  + +P Y+E    Y ++Y V+D+Y+G NF A+E  DG
Sbjct:    1 MYKLLVASVLLASVYGDHSAPHPSPAPYHPP--QPAPYHTPASSYHSPKYEEPAKPYAFQYGVADDYSGSNFSAEENADG 78
[Close]
BLAST of EMLSAG00000008436 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold143_size313727-processed-gene-2.5 (protein:Tk09421 transcript:snap_masked-scaffold143_size313727-processed-gene-2.5-mRNA-1 annotation:"reverse transcriptase-like protein")

HSP 1 Score: 80.4925 bits (197), Expect = 5.024e-19
Identity = 43/83 (51.81%), Postives = 57/83 (68.67%), Query Frame = 0 
Query:    1 MKSFISLSTLL--TVAFAD---HPAPAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            + +F++LS LL  TVA  D   HPAPAPYHP+P+H +P           SY E+P  YQY YAV D+Y+G+NF+A+EARDGY+
Sbjct:  412 LNTFVALSALLASTVAVPDDPYHPAPAPYHPTPHHSSP-----------SYHEEPANYQYGYAVQDDYSGVNFQANEARDGYA 483

HSP 2 Score: 68.5514 bits (166), Expect = 6.717e-15
Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 0 
Query:   23 PYHPSPYHPAPA-YKPA-PYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDG 76
            PY P+PYHPAPA Y PA P+H A S  E+P  YQY YAV D+Y+G+NF+A EARDG
Sbjct:  903 PYRPTPYHPAPAPYHPASPHHSASSNHEEPAQYQYGYAVQDDYSGVNFQAHEARDG 958

HSP 3 Score: 54.6842 bits (130), Expect = 4.685e-10
Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 0 
Query:   43 APSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            APS+ E+P  YQY YAV D+Y G+NF+A+EARDGY+
Sbjct:  682 APSHHEEPAQYQYGYAVQDDYAGVNFQANEARDGYA 717
[Close]
BLAST of EMLSAG00000008436 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1860_size26228-snap-gene-0.3 (protein:Tk08706 transcript:maker-scaffold1860_size26228-snap-gene-0.3-mRNA-1 annotation:"bcs-1 protein")

HSP 1 Score: 77.7962 bits (190), Expect = 3.117e-18
Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = 0 
Query:    2 KSFISLSTLLTVAFA---DHPAPAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDG 76
            K+F +LSTL+++  +   D   PAPYHP PYHPAP      +H  PSY E+P  YQY YAV D+Y+G+NF+A EARDG
Sbjct:   64 KTFFALSTLVSLTVSAPDDTYRPAPYHPVPYHPAP------HHSGPSYHEEPAQYQYGYAVQDDYSGVNFQAHEARDG 135

HSP 2 Score: 69.707 bits (169), Expect = 2.362e-15
Identity = 39/74 (52.70%), Postives = 47/74 (63.51%), Query Frame = 0 
Query:   21 PAPYHPSPYHPA--PAYKPAPYHPA--------------PSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            P PY P+PY P   PAY+PAPY PA              PSY E+P  YQY YAV D+Y G+NF+A+EARDGY+
Sbjct:  347 PTPYKPTPYKPTYKPAYQPAPYEPAAYSAPYHPAPHHSGPSYHEEPAQYQYGYAVQDDYAGVNFQANEARDGYA 420

HSP 3 Score: 55.0694 bits (131), Expect = 3.100e-10
Identity = 39/116 (33.62%), Postives = 52/116 (44.83%), Query Frame = 0 
Query:    7 LSTLLTVAFADHPAPAPYHPSPYHPAPAYKPAPYHPAP--------------------------------------------SYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            ++ +    +A+   PAPY P+PY  AP Y+PAPY  AP                                            SY E+P  YQY YAV D+Y G+NF+A+EARDGY+
Sbjct:  166 VADVRYEGYANEYQPAPYQPAPYKSAP-YQPAPYKSAPYKHTFVALSSLAALTVAVPADPYRPAPYQPAPAPYHPAPHHSGPSYHEEPAQYQYGYAVQDDYAGVNFQANEARDGYA 280
[Close]
BLAST of EMLSAG00000008436 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold879_size85478-snap-gene-0.20 (protein:Tk11988 transcript:maker-scaffold879_size85478-snap-gene-0.20-mRNA-1 annotation:"cuticle protein 19")

HSP 1 Score: 76.6406 bits (187), Expect = 7.543e-18
Identity = 47/102 (46.08%), Postives = 57/102 (55.88%), Query Frame = 0 
Query:    1 MKSFISLSTLLTVAFADHP--APAPYHPSPYHPAPAYKPAPYHPAP------------------SYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTC 82
            M+ F+SLS LL VA AD+P  APAPYHP+PY PAP Y+PAPYHPAP                   YK  P  + Y Y V DEY+G  F+  E +D Y  +  
Sbjct:    1 MRQFVSLSFLLGVALADNPYHAPAPYHPAPYQPAP-YQPAPYHPAPVHHAPSHPAPYKQPHHEDPYKIAPRPFSYEYGVKDEYSGAYFDKKETQDEYGVVAG 101
[Close]
BLAST of EMLSAG00000008436 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold110_size354795-snap-gene-0.17 (protein:Tk03429 transcript:maker-scaffold110_size354795-snap-gene-0.17-mRNA-1 annotation:"PREDICTED: uncharacterized protein K02A2.6-like")

HSP 1 Score: 70.0922 bits (170), Expect = 1.994e-15
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0 
Query:   21 PAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            PAPY P+PY PAP YKPA Y   P+Y E+P  Y+Y+Y V D+Y GL+F  +EARDGY+
Sbjct:  615 PAPYQPAPYQPAP-YKPASYK-EPAY-EEPAKYEYQYGVQDQYAGLDFAQNEARDGYA 669

HSP 2 Score: 70.0922 bits (170), Expect = 1.994e-15
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0 
Query:   21 PAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            PAPY P+PY PAP YKPA Y   P+Y E+P  Y+Y+Y V D+Y GL+F  +EARDGY+
Sbjct:  819 PAPYQPAPYQPAP-YKPASYK-EPAY-EEPAKYEYQYGVQDQYAGLDFAQNEARDGYA 873

HSP 3 Score: 68.9366 bits (167), Expect = 5.013e-15
Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 0 
Query:   21 PAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            PAPY P+PY PAP YKPA Y   P+Y E+P  Y+Y+Y V D+Y G++F  +EARDGY+
Sbjct:  509 PAPYQPAPYQPAP-YKPASYK-EPAY-EEPAKYEYQYGVQDQYAGVDFAQNEARDGYA 563

HSP 4 Score: 60.4622 bits (145), Expect = 4.047e-12
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 0 
Query:   25 HPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            +P+PY PAP YKPA Y   P+Y E+P  Y+Y+Y V D+Y GL+F  +EARDGY+
Sbjct:  717 NPAPYQPAP-YKPASYK-EPAY-EEPAKYEYQYGVQDQYAGLDFAQNEARDGYA 767
[Close]
BLAST of EMLSAG00000008436 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold558_size137302-processed-gene-0.8 (protein:Tk00715 transcript:snap_masked-scaffold558_size137302-processed-gene-0.8-mRNA-1 annotation:"bcs-1 protein")

HSP 1 Score: 64.6994 bits (156), Expect = 1.154e-14
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 0 
Query:   39 PYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCF 83
            PYHPAPSY+E P  YQY YAV D+Y G+NF+A+EARDGY+    +
Sbjct:   22 PYHPAPSYQEGPANYQYGYAVQDDYAGVNFQANEARDGYATNGGY 66
[Close]
BLAST of EMLSAG00000008436 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold3182_size9848-processed-gene-0.0 (protein:Tk09366 transcript:snap_masked-scaffold3182_size9848-processed-gene-0.0-mRNA-1 annotation:"cuticle protein")

HSP 1 Score: 64.3142 bits (155), Expect = 2.349e-14
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0 
Query:   21 PAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            PAPY P+PY PAP YKPA Y   P+Y E+P  Y+Y+Y V D+Y GL+F  +EARDGY+
Sbjct:   45 PAPYQPAPYQPAP-YKPASYK-EPAY-EEPAKYEYQYGVQDQYAGLDFAQNEARDGYA 99
[Close]
BLAST of EMLSAG00000008436 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold110_size354795-snap-gene-0.12 (protein:Tk03428 transcript:maker-scaffold110_size354795-snap-gene-0.12-mRNA-1 annotation:"cuticle protein")

HSP 1 Score: 63.929 bits (154), Expect = 2.388e-14
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0 
Query:   21 PAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            PAPY P+PY PAP YKPA Y   P+Y E+P  Y+Y+Y V D+Y GL+F  +EARDGY+
Sbjct:   23 PAPYQPAPYQPAP-YKPASYK-EPAY-EEPAKYEYQYGVQDQYAGLDFAQNEARDGYA 77
[Close]
BLAST of EMLSAG00000008436 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold304_size215464-snap-gene-1.21 (protein:Tk10786 transcript:maker-scaffold304_size215464-snap-gene-1.21-mRNA-1 annotation:"cuticle protein")

HSP 1 Score: 65.4698 bits (158), Expect = 5.574e-14
Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 0 
Query:    4 FISLSTLLTVAFADHPAPAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            FI+L+ L TVA A   AP   +P+PY PAP YKP  Y   P+Y E+P  Y+Y+Y V D+Y GL+F  +EARDGY+
Sbjct:  101 FIALAVLATVASA---APMADNPAPYQPAP-YKPTSYK-EPAY-EEPAKYEYQYGVQDQYAGLDFAQNEARDGYA 169

HSP 2 Score: 63.1586 bits (152), Expect = 3.921e-13
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 0 
Query:   21 PAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            PAPY P+PY PAP YKP  Y   P+Y E+P  Y+Y+Y V D+Y GL+F  +EARDGY+
Sbjct:  247 PAPYQPAPYQPAP-YKPTSYK-EPAY-EEPAKYEYQYGVQDQYAGLDFAQNEARDGYA 301
[Close]
BLAST of EMLSAG00000008436 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold110_size354795-snap-gene-0.13 (protein:Tk03430 transcript:maker-scaffold110_size354795-snap-gene-0.13-mRNA-1 annotation:"cuticle protein 7")

HSP 1 Score: 64.6994 bits (156), Expect = 6.061e-14
Identity = 40/80 (50.00%), Postives = 48/80 (60.00%), Query Frame = 0 
Query:   17 DHPAPAPYHPSP------YHPAPAYKPAPYHPA--PSYKE-----DPTVYQYRYAVSDEYTGLNFEADEARDGYSXLTCF 83
            D PAPAPY P P      Y P P Y PAPY PA  P+YKE     +P  Y+Y+YAV+D  T  NFE +EARDGY+    +
Sbjct:  108 DKPAPAPYQPEPQYAPASYQPEPQYAPAPYQPAYRPAYKEPVEPVEPPKYEYQYAVADHETYTNFEKNEARDGYATNGGY 187

HSP 2 Score: 61.6178 bits (148), Expect = 1.044e-12
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0 
Query:   21 PAPYHPSPYHPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            PAPY P+PY PAP YKPA Y   P+Y E+P  Y+Y+Y V D+Y GL+F  +EARDGY+
Sbjct:    5 PAPYQPAPYQPAP-YKPASYK-EPAY-EEPAKYEYQYGVQDQYAGLDFAQNEARDGYA 59
[Close]
BLAST of EMLSAG00000008436 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold411_size179879-processed-gene-0.22 (protein:Tk06331 transcript:snap_masked-scaffold411_size179879-processed-gene-0.22-mRNA-1 annotation:"cuticle protein")

HSP 1 Score: 65.855 bits (159), Expect = 6.148e-14
Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 0 
Query:   21 PAPYHPSPYHPAPAYKPAPY--------HPAPSYKED-----PTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            PAPY P+PYH  PAYKPAPY        HPAP++        P VYQY YAV+D+Y+G +F  +E RD Y+
Sbjct:  471 PAPYQPAPYHAEPAYKPAPYKPSHPAPYHPAPAHGHGDEYVTPPVYQYGYAVADDYSGTSFTQNENRDNYA 541

HSP 2 Score: 65.855 bits (159), Expect = 6.148e-14
Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 0 
Query:   21 PAPYHPSPYHPAPAYKPAPY--------HPAPSYKED-----PTVYQYRYAVSDEYTGLNFEADEARDGYS 78
            PAPY P+PYH  PAYKPAPY        HPAP++        P VYQY YAV+D+Y+G +F  +E RD Y+
Sbjct:  571 PAPYQPAPYHAEPAYKPAPYKPSHPAPYHPAPAHGHGDEYVTPPVYQYGYAVADDYSGTSFTQNENRDNYA 641
The following BLAST results are available for this feature:
BLAST of EMLSAG00000008436 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000008436 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592846227|gb|GAXK01111317.1|4.503e-851.35TSA: Calanus finmarchicus comp53564_c0_seq3 transc... [more]
gi|592846226|gb|GAXK01111318.1|4.785e-851.35TSA: Calanus finmarchicus comp53564_c0_seq4 transc... [more]
gi|592846229|gb|GAXK01111315.1|4.950e-851.35TSA: Calanus finmarchicus comp53564_c0_seq1 transc... [more]
gi|592846228|gb|GAXK01111316.1|5.175e-851.35TSA: Calanus finmarchicus comp53564_c0_seq2 transc... [more]
gi|592784431|gb|GAXK01170137.1|2.378e-650.00TSA: Calanus finmarchicus comp342_c1_seq1 transcri... [more]
gi|592784429|gb|GAXK01170139.1|2.702e-650.00TSA: Calanus finmarchicus comp342_c1_seq3 transcri... [more]
gi|592784428|gb|GAXK01170140.1|3.817e-650.00TSA: Calanus finmarchicus comp342_c1_seq4 transcri... [more]
gi|592778513|gb|GAXK01176055.1|1.218e-548.57TSA: Calanus finmarchicus comp3854_c1_seq1 transcr... [more]
gi|592778512|gb|GAXK01176056.1|1.256e-548.57TSA: Calanus finmarchicus comp3854_c1_seq2 transcr... [more]
gi|592881786|gb|GAXK01076352.1|6.741e-548.48TSA: Calanus finmarchicus comp624121_c0_seq2 trans... [more]

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BLAST of EMLSAG00000008436 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 21
Match NameE-valueIdentityDescription
EMLSAP000000084364.306e-85100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s5171:2891... [more]
EMLSAP000000014157.657e-3176.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1241:8469... [more]
EMLSAP000000090043.743e-2683.75pep:novel supercontig:LSalAtl2s:LSalAtl2s5650:4067... [more]
EMLSAP000000098913.046e-2458.97pep:novel supercontig:LSalAtl2s:LSalAtl2s643:44181... [more]
EMLSAP000000014146.473e-2465.22pep:novel supercontig:LSalAtl2s:LSalAtl2s1241:7879... [more]
EMLSAP000000033532.087e-1662.30pep:novel supercontig:LSalAtl2s:LSalAtl2s1834:1747... [more]
EMLSAP000000014133.826e-1662.20pep:novel supercontig:LSalAtl2s:LSalAtl2s1241:3901... [more]
EMLSAP000000014161.588e-1560.26pep:novel supercontig:LSalAtl2s:LSalAtl2s1241:8830... [more]
EMLSAP000000048443.215e-1437.90pep:novel supercontig:LSalAtl2s:LSalAtl2s2560:1344... [more]
EMLSAP000000098921.207e-1353.57pep:novel supercontig:LSalAtl2s:LSalAtl2s643:49361... [more]

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BLAST of EMLSAG00000008436 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000008436 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000008436 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 4
Match NameE-valueIdentityDescription
gi|155966288|gb|ABU41097.1|8.862e-1880.39putative cuticle protein, partial [Lepeophtheirus ... [more]
gi|155966279|gb|ABU41093.1|2.412e-1466.10BCS-1 protein, partial [Lepeophtheirus salmonis][more]
gi|225714206|gb|ACO12949.1|1.849e-1150.67Cuticle protein 7 [Lepeophtheirus salmonis][more]
gi|290462725|gb|ADD24410.1|6.894e-841.25Cuticle protein 18.6, isoform B [Lepeophtheirus sa... [more]
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BLAST of EMLSAG00000008436 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 25
Match NameE-valueIdentityDescription
snap_masked-scaffold143_size313727-processed-gene-2.55.024e-1951.81protein:Tk09421 transcript:snap_masked-scaffold143... [more]
maker-scaffold1860_size26228-snap-gene-0.33.117e-1853.85protein:Tk08706 transcript:maker-scaffold1860_size... [more]
maker-scaffold879_size85478-snap-gene-0.207.543e-1846.08protein:Tk11988 transcript:maker-scaffold879_size8... [more]
maker-scaffold110_size354795-snap-gene-0.171.994e-1558.62protein:Tk03429 transcript:maker-scaffold110_size3... [more]
snap_masked-scaffold558_size137302-processed-gene-0.81.154e-1462.22protein:Tk00715 transcript:snap_masked-scaffold558... [more]
snap_masked-scaffold3182_size9848-processed-gene-0.02.349e-1458.62protein:Tk09366 transcript:snap_masked-scaffold318... [more]
maker-scaffold110_size354795-snap-gene-0.122.388e-1458.62protein:Tk03428 transcript:maker-scaffold110_size3... [more]
maker-scaffold304_size215464-snap-gene-1.215.574e-1452.00protein:Tk10786 transcript:maker-scaffold304_size2... [more]
maker-scaffold110_size354795-snap-gene-0.136.061e-1450.00protein:Tk03430 transcript:maker-scaffold110_size3... [more]
snap_masked-scaffold411_size179879-processed-gene-0.226.148e-1450.70protein:Tk06331 transcript:snap_masked-scaffold411... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s5171supercontigLSalAtl2s5171:2891..3319 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap-LSalAtl2s5171-processed-gene-0.3
Biotypeprotein_coding
EvidenceIEA
Noteputative cuticle protein, partial [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000008436 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000008436EMLSAT00000008436-704283Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s5171:2891..3319-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000008436-691202 ID=EMLSAG00000008436-691202|Name=EMLSAG00000008436|organism=Lepeophtheirus salmonis|type=gene|length=429bp|location=Sequence derived from alignment at LSalAtl2s5171:2891..3319- (Lepeophtheirus salmonis)
ATGAAGGTAATTAACAAATGGAAATCAAATCTTAAAGGTGTAACATAAGT
ATTTTTTTCTTCTTTATAGTCCTTTATTTCTTTATCTACTCTTTTGACTG
TTGCCTTTGCTGACCACCCAGCACCTGCTCCCTACCACCCATCCCCTTAT
CACCCTGCRCCAGCCTACAAACCCGCTCCTTACCACCCAGCTCCTTCCTA
CAAGGAAGATCCAACAGTCTACCAATACCGATATGCTGTCAGTGATGAAT
ATACTGGACTCAACTTTGAAGCTGATGAGGCCCGTGATGGATACTCCANA
TTGACTTGTTTCACACCACGCCCTAGAAAACACTGTCTGCTTCAATCGTT
TTTTATGAATAAAAATGCGTGCATATCAATACACAAAGCATCCAGAATCA
AGACATTTGTTTTTTTTATTCAAATTTAA
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