EMLSAG00000008479, EMLSAG00000008479-691245 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000008479 vs. GO
Match: - (symbol:Edg84A "Ecdysone-dependent gene 84A" species:7227 "Drosophila melanogaster" [GO:0008011 "structural constituent of pupal chitin-based cuticle" evidence=ISS;NAS;TAS] [GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS] [GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISM] [GO:0040003 "chitin-based cuticle development" evidence=ISM] [GO:0031012 "extracellular matrix" evidence=ISM] InterPro:IPR000618 Pfam:PF00379 PRINTS:PR00947 PROSITE:PS00233 PROSITE:PS51155 EMBL:AE014297 GO:GO:0031012 GO:GO:0040003 EMBL:AE001572 GO:GO:0008010 GO:GO:0008011 EMBL:M71249 PIR:B49773 RefSeq:NP_524247.1 UniGene:Dm.27225 STRING:7227.FBpp0081186 PaxDb:P27780 PRIDE:P27780 EnsemblMetazoa:FBtr0081688 GeneID:40818 KEGG:dme:Dmel_CG2345 CTD:40818 FlyBase:FBgn0000552 eggNOG:NOG295514 GeneTree:ENSGT00560000077390 HOGENOM:HOG000264025 InParanoid:P27780 OMA:HHAPVTH OrthoDB:EOG7D59R0 PhylomeDB:P27780 GenomeRNAi:40818 NextBio:820744 Bgee:P27780 Uniprot:P27780) HSP 1 Score: 50.8322 bits (120), Expect = 8.240e-7 Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDT-GYHILEMRE 103 ++S+++DV D +SQS++RD VV G+YS DA G RR Y ADD G++ + RE Sbjct: 36 QYSFNYDVQDPETGDVKSQSESRDGDVVHGQYSVNDADGYRRTVDYTADDVRGFNAVVRRE 96
BLAST of EMLSAG00000008479 vs. GO
Match: - (symbol:Cpr64Aa "Cuticular protein 64Aa" species:7227 "Drosophila melanogaster" [GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISM;ISS] [GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS] [GO:0040003 "chitin-based cuticle development" evidence=ISM] [GO:0031012 "extracellular matrix" evidence=ISM] InterPro:IPR000618 Pfam:PF00379 PRINTS:PR00947 PROSITE:PS00233 PROSITE:PS51155 EMBL:AE014296 GO:GO:0031012 GO:GO:0040003 GO:GO:0008010 GeneTree:ENSGT00560000077390 OrthoDB:EOG7D59R0 EMBL:AY070633 RefSeq:NP_647872.1 UniGene:Dm.6343 IntAct:Q9VZG2 MINT:MINT-306482 STRING:7227.FBpp0073110 EnsemblMetazoa:FBtr0073254 GeneID:38508 KEGG:dme:Dmel_CG15006 UCSC:CG15006-RA CTD:38508 FlyBase:FBgn0035510 eggNOG:NOG258775 InParanoid:Q9VZG2 OMA:AQKLILV GenomeRNAi:38508 NextBio:809004 Uniprot:Q9VZG2) HSP 1 Score: 48.9062 bits (115), Expect = 5.402e-6 Identity = 23/61 (37.70%), Postives = 37/61 (60.66%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDT-GYHILEMRE 103 ++++S+DV D + +SQ +TR VV G YS ++A G RR+ Y AD G++ + RE Sbjct: 59 QYTFSYDVHDGSTGDVKSQQETRSGDVVQGAYSLIEADGTRRIVEYTADPVHGFNAVVRRE 119
BLAST of EMLSAG00000008479 vs. GO
Match: - (symbol:CG34461 species:7227 "Drosophila melanogaster" [GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS] [GO:0040003 "chitin-based cuticle development" evidence=ISM] [GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISM] [GO:0031012 "extracellular matrix" evidence=ISM] InterPro:IPR000618 Pfam:PF00379 PRINTS:PR00947 PROSITE:PS00233 PROSITE:PS51155 EMBL:AE014296 GO:GO:0031012 GO:GO:0040003 GO:GO:0008010 GeneTree:ENSGT00560000077390 OrthoDB:EOG7D59R0 EMBL:BT016066 RefSeq:NP_001097547.1 RefSeq:NP_001261576.1 UniGene:Dm.15483 EnsemblMetazoa:FBtr0112767 EnsemblMetazoa:FBtr0333056 GeneID:5740547 KEGG:dme:Dmel_CG34461 UCSC:CG34461-RA FlyBase:FBgn0250833 eggNOG:NOG145869 InParanoid:Q5U126 OMA:KSAPAVH GenomeRNAi:5740547 NextBio:20891584 Uniprot:Q5U126) HSP 1 Score: 47.7506 bits (112), Expect = 6.379e-6 Identity = 27/97 (27.84%), Postives = 46/97 (47.42%), Query Frame = 0 Query: 8 FVGIVCLLLSLQLTDVE--------ARHRRRIRNQNLSIKRKPI---KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADD 93 FV I L + Q +E H + + ++ +P+ K+S+++ + D + +SQ++ RD VV G+YS V+ G R Y ADD Sbjct: 4 FVAIALLFAAAQAVPIELGHYAPALVHHAPVLSHAVHAVHAEPVAYPKYSFNYGIKDPHTGDIKSQAEERDGDVVKGQYSLVEPDGSVRTVDYTADD 100
BLAST of EMLSAG00000008479 vs. GO
Match: - (symbol:Cpr30B "Cuticular protein 30B" species:7227 "Drosophila melanogaster" [GO:0008011 "structural constituent of pupal chitin-based cuticle" evidence=ISS] [GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS] [GO:0031012 "extracellular matrix" evidence=ISM] [GO:0040003 "chitin-based cuticle development" evidence=ISM] [GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISM] InterPro:IPR000618 Pfam:PF00379 PRINTS:PR00947 PROSITE:PS00233 PROSITE:PS51155 EMBL:AE014134 GO:GO:0031012 GO:GO:0040003 GO:GO:0008010 GeneTree:ENSGT00560000077390 OrthoDB:EOG7D59R0 EMBL:BT100143 RefSeq:NP_609295.1 UniGene:Dm.23862 STRING:7227.FBpp0079429 EnsemblMetazoa:FBtr0079831 GeneID:34270 KEGG:dme:Dmel_CG3818 UCSC:CG3818-RA CTD:34270 FlyBase:FBgn0032125 eggNOG:NOG310032 InParanoid:Q9VLB1 OMA:GPTAQYK GenomeRNAi:34270 NextBio:787666 Uniprot:Q9VLB1) HSP 1 Score: 46.2098 bits (108), Expect = 2.538e-5 Identity = 25/94 (26.60%), Postives = 47/94 (50.00%), Query Frame = 0 Query: 11 IVCLLLSLQLTDVEARHRRRIRNQNLSIKRKPIKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADD-TGYHILEMRE 103 ++CL L+ + +E + P+ + + + V+D + +SQ ++R D V G Y +D+ G RR+ +Y+ADD G+ + RE Sbjct: 8 LLCLCLASAVWAIELQAEP---------DYGPVAYEFQWSVNDPHTGDIKSQKESRKDDKVEGVYELIDSDGYRRIVQYKADDHNGFEAIVQRE 92
BLAST of EMLSAG00000008479 vs. GO
Match: - (symbol:Cpr66D "Cuticular protein 66D" species:7227 "Drosophila melanogaster" [GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISM;ISS] [GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS] [GO:0040003 "chitin-based cuticle development" evidence=ISM] [GO:0031012 "extracellular matrix" evidence=ISM] InterPro:IPR000618 Pfam:PF00379 PRINTS:PR00947 PROSITE:PS00233 PROSITE:PS51155 EMBL:AE014296 GO:GO:0031012 GO:GO:0040003 GO:GO:0008010 GeneTree:ENSGT00560000077390 OrthoDB:EOG7D59R0 EMBL:AY071527 RefSeq:NP_729400.1 UniGene:Dm.5882 IntAct:Q9VSN3 MINT:MINT-323608 EnsemblMetazoa:FBtr0076567 GeneID:38990 KEGG:dme:Dmel_CG32029 UCSC:CG32029-RA CTD:38990 FlyBase:FBgn0052029 eggNOG:NOG73487 InParanoid:Q9VSN3 OMA:PAYLRQY GenomeRNAi:38990 NextBio:811350 Uniprot:Q9VSN3) HSP 1 Score: 45.8246 bits (107), Expect = 8.768e-5 Identity = 25/70 (35.71%), Postives = 36/70 (51.43%), Query Frame = 0 Query: 25 ARHRRRIRNQNLSIKRKPIKFSY--SFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRAD 92 +H+ ++ QN + SY FDV DD YQ++ + RD V+ G YS VD+ G R +Y AD Sbjct: 136 GQHKLSLQQQNEEEEYDDQNSSYQFGFDVKDDEFTNYQNRKEIRDGSVIKGSYSVVDSDGFIRTVKYTAD 205
BLAST of EMLSAG00000008479 vs. GO
Match: - (symbol:Ccp84Ac "Ccp84Ac" species:7227 "Drosophila melanogaster" [GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISM;ISS] [GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS] [GO:0031012 "extracellular matrix" evidence=ISM] [GO:0040003 "chitin-based cuticle development" evidence=ISM] InterPro:IPR000618 Pfam:PF00379 PRINTS:PR00947 PROSITE:PS00233 PROSITE:PS51155 EMBL:AE014297 GO:GO:0031012 GO:GO:0040003 EMBL:AE001572 GO:GO:0008010 GeneTree:ENSGT00560000077390 OrthoDB:EOG7D59R0 EMBL:BT031013 RefSeq:NP_649681.1 UniGene:Dm.13664 STRING:7227.FBpp0081191 EnsemblMetazoa:FBtr0081693 GeneID:40823 KEGG:dme:Dmel_CG1327 UCSC:CG1327-RA CTD:40823 FlyBase:FBgn0004781 eggNOG:NOG260306 InParanoid:O97060 OMA:HAHEVYP GenomeRNAi:40823 NextBio:820769 Uniprot:O97060) HSP 1 Score: 45.4394 bits (106), Expect = 1.279e-4 Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADD-TGYHILEMRE 103 K+++++DV D +SQ ++RD VV GEYS DA G RR +Y AD G++ + RE Sbjct: 64 KYNFAYDVQDALSGDSKSQVESRDGDVVQGEYSLDDADGFRRTVKYTADSVNGFNAVVHRE 124
BLAST of EMLSAG00000008479 vs. GO
Match: - (symbol:Ccp84Ad "Ccp84Ad" species:7227 "Drosophila melanogaster" [GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISM;ISS] [GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS] [GO:0031012 "extracellular matrix" evidence=ISM] [GO:0040003 "chitin-based cuticle development" evidence=ISM] [GO:0032504 "multicellular organism reproduction" evidence=IEP] [GO:0005615 "extracellular space" evidence=IDA] InterPro:IPR000618 Pfam:PF00379 PRINTS:PR00947 PROSITE:PS00233 PROSITE:PS51155 EMBL:AE014297 GO:GO:0005615 GO:GO:0032504 GO:GO:0031012 GO:GO:0040003 EMBL:AE001572 GO:GO:0008010 GeneTree:ENSGT00560000077390 OrthoDB:EOG7D59R0 RefSeq:NP_649680.1 UniGene:Dm.13663 IntAct:O97061 MINT:MINT-753842 STRING:7227.FBpp0081188 EnsemblMetazoa:FBtr0081690 GeneID:40822 KEGG:dme:Dmel_CG2341 UCSC:CG2341-RA CTD:40822 FlyBase:FBgn0004780 eggNOG:NOG241678 InParanoid:O97061 OMA:LSHAPIN GenomeRNAi:40822 NextBio:820764 Uniprot:O97061) HSP 1 Score: 44.669 bits (104), Expect = 2.034e-4 Identity = 24/61 (39.34%), Postives = 36/61 (59.02%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADD-TGYHILEMRE 103 ++ Y++DV D +SQ + RD VV GEYS +DA G +R +Y AD G++ + RE Sbjct: 61 QYKYAYDVQDSLSGDSKSQVEERDGDVVRGEYSLIDADGYKRTVQYTADPINGFNAVVNRE 121
BLAST of EMLSAG00000008479 vs. GO
Match: - (symbol:Cpr5C "Cuticular protein 5C" species:7227 "Drosophila melanogaster" [GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISM;ISS] [GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS] [GO:0031012 "extracellular matrix" evidence=ISM] [GO:0040003 "chitin-based cuticle development" evidence=ISM] InterPro:IPR000618 Pfam:PF00379 PRINTS:PR00947 PROSITE:PS00233 PROSITE:PS51155 EMBL:AE014298 GO:GO:0031012 GO:GO:0040003 GO:GO:0008010 GeneTree:ENSGT00560000077390 OrthoDB:EOG7D59R0 RefSeq:NP_572266.1 UniGene:Dm.26466 STRING:7227.FBpp0070781 PRIDE:Q9W471 EnsemblMetazoa:FBtr0070815 GeneID:31510 KEGG:dme:Dmel_CG4052 UCSC:CG4052-RA CTD:31510 FlyBase:FBgn0029811 eggNOG:NOG305802 InParanoid:Q9W471 OMA:APIARTY PhylomeDB:Q9W471 GenomeRNAi:31510 NextBio:773977 Bgee:Q9W471 Uniprot:Q9W471) HSP 1 Score: 43.1282 bits (100), Expect = 3.193e-4 Identity = 24/61 (39.34%), Postives = 36/61 (59.02%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADD-TGYHILEMRE 103 ++ Y++DV D +SQ + RD VV GEYS VD+ G +R +Y AD G++ + RE Sbjct: 63 QYKYAYDVQDAISGDSKSQVEERDGDVVRGEYSLVDSDGFKRTVQYTADPINGFNAVVNRE 123
BLAST of EMLSAG00000008479 vs. GO
Match: - (symbol:Cry "Crystallin" species:7227 "Drosophila melanogaster" [GO:0005509 "calcium ion binding" evidence=IDA] [GO:0031012 "extracellular matrix" evidence=IDA] [GO:0007601 "visual perception" evidence=IC] [GO:0048058 "compound eye corneal lens development" evidence=IEP] [GO:0005212 "structural constituent of eye lens" evidence=IDA] [GO:0005576 "extracellular region" evidence=ISM] [GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS] InterPro:IPR000618 Pfam:PF00379 PRINTS:PR00947 PROSITE:PS00233 PROSITE:PS51155 GO:GO:0005576 EMBL:AE014134 GO:GO:0005509 GO:GO:0007601 GO:GO:0031012 GO:GO:0005212 GO:GO:0042302 CTD:34604 GO:GO:0048058 GeneTree:ENSGT00560000077390 FlyBase:FBgn0005664 EMBL:AY119178 RefSeq:NP_476906.1 UniGene:Dm.4854 EnsemblMetazoa:FBtr0080281 GeneID:34604 KEGG:dme:Dmel_CG16963 UCSC:CG16963-RA InParanoid:Q9VKE2 OMA:CNVANSA GenomeRNAi:34604 NextBio:789270 Uniprot:Q9VKE2) HSP 1 Score: 43.5134 bits (101), Expect = 7.680e-4 Identity = 22/68 (32.35%), Postives = 39/68 (57.35%), Query Frame = 0 Query: 33 NQNLSIKRKPIKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADD-TGYHIL 99 N N +P ++S+++DV D + Q + RD +V G+YS ++ G RR+ Y ADD +G++ + Sbjct: 66 NSNEDYDTRP-QYSFAYDVRDSLTGDDKRQEEKRDGDLVKGQYSLIEPDGTRRIVEYTADDVSGFNAI 132
BLAST of EMLSAG00000008479 vs. C. finmarchicus
Match: gi|592776503|gb|GAXK01178065.1| (TSA: Calanus finmarchicus comp15587_c1_seq1 transcribed RNA sequence) HSP 1 Score: 53.1434 bits (126), Expect = 9.737e-8 Identity = 25/62 (40.32%), Postives = 35/62 (56.45%), Query Frame = 0 Query: 42 PIKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMRE 103 P K++Y + V++DN Q Y +Q++ RD V G YS+VD G Y A + GY E RE Sbjct: 338 PAKYNYEYKVANDNTQTYITQAEERDGLEVKGTYSYVDPTGAIVTVNYTAGELGYQ--ETRE 517
BLAST of EMLSAG00000008479 vs. C. finmarchicus
Match: gi|592776504|gb|GAXK01178064.1| (TSA: Calanus finmarchicus comp15587_c0_seq1 transcribed RNA sequence) HSP 1 Score: 53.1434 bits (126), Expect = 1.035e-7 Identity = 25/62 (40.32%), Postives = 35/62 (56.45%), Query Frame = 0 Query: 42 PIKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMRE 103 P K++Y + V++DN Q Y +Q++ RD V G YS+VD G Y A + GY E RE Sbjct: 295 PAKYNYEYKVANDNTQTYITQAEERDGLEVKGTYSYVDPTGAIVTVNYTAGELGYQ--ETRE 474
BLAST of EMLSAG00000008479 vs. C. finmarchicus
Match: gi|592776165|gb|GAXK01178403.1| (TSA: Calanus finmarchicus comp15136_c2_seq10 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 1.493e-6 Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMREEN 105 +++++F V+D++ Q Y +Q ++R + VTG YS+VD LG Y A GY +EN Sbjct: 162 QYTFNFKVADEDEQTYIAQEESRAGESVTGSYSYVDPLGSLITVTYTAGPMGYQETRNVQEN 347
BLAST of EMLSAG00000008479 vs. C. finmarchicus
Match: gi|592776169|gb|GAXK01178399.1| (TSA: Calanus finmarchicus comp15136_c2_seq6 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 1.515e-6 Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMREEN 105 +++++F V+D++ Q Y +Q ++R + VTG YS+VD LG Y A GY +EN Sbjct: 162 QYTFNFKVADEDEQTYIAQEESRAGESVTGSYSYVDPLGSLITVTYTAGPMGYQETRNVQEN 347
BLAST of EMLSAG00000008479 vs. C. finmarchicus
Match: gi|592892321|gb|GAXK01066054.1| (TSA: Calanus finmarchicus comp4960_c16_seq2 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 1.553e-6 Identity = 22/61 (36.07%), Postives = 36/61 (59.02%), Query Frame = 0 Query: 43 IKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMRE 103 +++ Y + V+DD+ Q Y + +TR+ + V G+Y++VDA G Y+A GY E RE Sbjct: 679 VQYEYGYKVADDDAQAYMAHEETRNGESVEGKYNYVDANGALVTVTYQAGPEGY--TENRE 855
BLAST of EMLSAG00000008479 vs. C. finmarchicus
Match: gi|592776167|gb|GAXK01178401.1| (TSA: Calanus finmarchicus comp15136_c2_seq8 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 1.648e-6 Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMREEN 105 +++++F V+D++ Q Y +Q ++R + VTG YS+VD LG Y A GY +EN Sbjct: 162 QYTFNFKVADEDEQTYIAQEESRAGESVTGSYSYVDPLGSLITVTYTAGPMGYQETRNVQEN 347
BLAST of EMLSAG00000008479 vs. C. finmarchicus
Match: gi|592776170|gb|GAXK01178398.1| (TSA: Calanus finmarchicus comp15136_c2_seq5 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 1.672e-6 Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMREEN 105 +++++F V+D++ Q Y +Q ++R + VTG YS+VD LG Y A GY +EN Sbjct: 162 QYTFNFKVADEDEQTYIAQEESRAGESVTGSYSYVDPLGSLITVTYTAGPMGYQETRNVQEN 347
BLAST of EMLSAG00000008479 vs. C. finmarchicus
Match: gi|592892290|gb|GAXK01066085.1| (TSA: Calanus finmarchicus comp4960_c17_seq4 transcribed RNA sequence) HSP 1 Score: 49.6766 bits (117), Expect = 1.689e-6 Identity = 22/61 (36.07%), Postives = 36/61 (59.02%), Query Frame = 0 Query: 43 IKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMRE 103 +++ Y + V+DD+ Q Y + +TR+ + V G+Y++VDA G Y+A GY E RE Sbjct: 276 VQYEYGYKVADDDAQAYMAHEETRNGESVEGKYNYVDANGALVTVTYQAGPEGY--TENRE 452
BLAST of EMLSAG00000008479 vs. C. finmarchicus
Match: gi|592892291|gb|GAXK01066084.1| (TSA: Calanus finmarchicus comp4960_c17_seq3 transcribed RNA sequence) HSP 1 Score: 49.6766 bits (117), Expect = 1.818e-6 Identity = 22/61 (36.07%), Postives = 36/61 (59.02%), Query Frame = 0 Query: 43 IKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMRE 103 +++ Y + V+DD+ Q Y + +TR+ + V G+Y++VDA G Y+A GY E RE Sbjct: 276 VQYEYGYKVADDDAQAYMAHEETRNGESVEGKYNYVDANGALVTVTYQAGPEGY--TENRE 452
BLAST of EMLSAG00000008479 vs. C. finmarchicus
Match: gi|592776164|gb|GAXK01178404.1| (TSA: Calanus finmarchicus comp15136_c2_seq11 transcribed RNA sequence) HSP 1 Score: 49.6766 bits (117), Expect = 1.847e-6 Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMREEN 105 +++++F V+D++ Q Y +Q ++R + VTG YS+VD LG Y A GY +EN Sbjct: 162 QYTFNFKVADEDEQTYIAQEESRAGESVTGSYSYVDPLGSLITVTYTAGPMGYQETRNVQEN 347
BLAST of EMLSAG00000008479 vs. L. salmonis peptides
Match: EMLSAP00000008479 (pep:novel supercontig:LSalAtl2s:LSalAtl2s51:793791:799696:-1 gene:EMLSAG00000008479 transcript:EMLSAT00000008479 description:"maker-LSalAtl2s51-augustus-gene-8.6") HSP 1 Score: 418.698 bits (1075), Expect = 5.421e-150 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 Query: 1 MQRTISIFVGIVCLLLSLQLTDVEARHRRRIRNQNLSIKRKPIKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMREENPVPKSQKLKSRVRMKEAFRNRKLRKRKLRKLSTNNSIKRSSLSIRKPKVLRVVRKRKRFEPLTLSTNALKPAPAKPLPIHVXPLSILDPNEPPLFLTSAPSLSII 210 MQRTISIFVGIVCLLLSLQLTDVEARHRRRIRNQNLSIKRKPIKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMREENPVPKSQKLKSRVRMKEAFRNRKLRKRKLRKLSTNNSIKRSSLSIRKPKVLRVVRKRKRFEPLTLSTNALKPAPAKPLPIHVXPLSILDPNEPPLFLTSAPSLSII Sbjct: 1 MQRTISIFVGIVCLLLSLQLTDVEARHRRRIRNQNLSIKRKPIKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGYHILEMREENPVPKSQKLKSRVRMKEAFRNRKLRKRKLRKLSTNNSIKRSSLSIRKPKVLRVVRKRKRFEPLTLSTNALKPAPAKPLPIHVXPLSILDPNEPPLFLTSAPSLSII 210
BLAST of EMLSAG00000008479 vs. L. salmonis peptides
Match: EMLSAP00000009987 (pep:novel supercontig:LSalAtl2s:LSalAtl2s653:53831:54292:-1 gene:EMLSAG00000009987 transcript:EMLSAT00000009987 description:"maker-LSalAtl2s653-augustus-gene-0.29") HSP 1 Score: 47.7506 bits (112), Expect = 8.521e-8 Identity = 31/89 (34.83%), Postives = 42/89 (47.19%), Query Frame = 0 Query: 8 FVGIVCLLLSLQLTDVEARHRRRIRNQNLSIKRKPIKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGY 96 FV +CLL S L R + +++ KF Y V+ D Q Y +Q +TRD VTG+Y++VDA G Y A GY Sbjct: 3 FVITLCLLASTVLA------RPQGVDEDYFDPNPQYKFEYK--VASDETQTYMTQQETRDGDFVTGQYTYVDANGALVTVTYEAGPDGY 83
BLAST of EMLSAG00000008479 vs. L. salmonis peptides
Match: EMLSAP00000007421 (pep:novel supercontig:LSalAtl2s:LSalAtl2s422:252430:252887:-1 gene:EMLSAG00000007421 transcript:EMLSAT00000007421 description:"maker-LSalAtl2s422-augustus-gene-2.5") HSP 1 Score: 46.9802 bits (110), Expect = 1.994e-7 Identity = 20/53 (37.74%), Postives = 30/53 (56.60%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGY 96 ++ + + V+ D Q Y +Q +TRD VTG+Y++VDA G Y A GY Sbjct: 31 QYKFEYKVASDETQTYMTQQETRDGDFVTGQYTYVDANGALVTVTYEAGPDGY 83
BLAST of EMLSAG00000008479 vs. L. salmonis peptides
Match: EMLSAP00000007422 (pep:novel supercontig:LSalAtl2s:LSalAtl2s422:284132:284552:-1 gene:EMLSAG00000007422 transcript:EMLSAT00000007422 description:"maker-LSalAtl2s422-augustus-gene-3.2") HSP 1 Score: 45.4394 bits (106), Expect = 5.759e-7 Identity = 20/53 (37.74%), Postives = 30/53 (56.60%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGY 96 K+ + + V+ D Q Y +Q ++RD VTG+Y++VDA G Y A GY Sbjct: 32 KYRFEYKVASDETQTYMTQEESRDGDFVTGQYTYVDANGSLVTVTYEAGPEGY 84
BLAST of EMLSAG00000008479 vs. SwissProt
Match: gi|117640|sp|P27780.1|CUP8_DROME (RecName: Full=Pupal cuticle protein Edg-84A; Flags: Precursor) HSP 1 Score: 50.8322 bits (120), Expect = 6.596e-7 Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDT-GYHILEMRE 103 ++S+++DV D +SQS++RD VV G+YS DA G RR Y ADD G++ + RE Sbjct: 36 QYSFNYDVQDPETGDVKSQSESRDGDVVHGQYSVNDADGYRRTVDYTADDVRGFNAVVRRE 96
BLAST of EMLSAG00000008479 vs. Select Arthropod Genomes
Match: EAA14334.4 (AGAP010095-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 52.373 bits (124), Expect = 1.833e-7 Identity = 24/63 (38.10%), Postives = 39/63 (61.90%), Query Frame = 0 Query: 42 PIKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADD-TGYHILEMRE 103 P ++ +++DV DD+ +SQ + R VV G+Y+ +DA G RR+ Y ADD G++ + RE Sbjct: 78 PAEYQFAYDVHDDHTGDVKSQQEERHGDVVKGQYTLIDADGYRRIVDYTADDHNGFNAVVRRE 140
BLAST of EMLSAG00000008479 vs. Select Arthropod Genomes
Match: EAU76116.1 (AGAP010122-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 52.373 bits (124), Expect = 2.448e-7 Identity = 25/64 (39.06%), Postives = 41/64 (64.06%), Query Frame = 0 Query: 41 KPIKFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADD-TGYHILEMRE 103 + + + +S+ V D +SQ ++R + V G+YSWVDA G+R++ YRADD TG++ + RE Sbjct: 84 EQVGYDFSYSVHDPVTGDQKSQEESRRNGHVRGQYSWVDADGIRQIVNYRADDRTGFNAEQRRE 147
BLAST of EMLSAG00000008479 vs. Select Arthropod Genomes
Match: AAF54097.2 (Ecdysone-dependent gene 84A [Drosophila melanogaster]) HSP 1 Score: 50.8322 bits (120), Expect = 3.197e-7 Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0 Query: 44 KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDT-GYHILEMRE 103 ++S+++DV D +SQS++RD VV G+YS DA G RR Y ADD G++ + RE Sbjct: 36 QYSFNYDVQDPETGDVKSQSESRDGDVVHGQYSVNDADGYRRTVDYTADDVRGFNAVVRRE 96
BLAST of EMLSAG00000008479 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold417_size177606-processed-gene-0.2 (protein:Tk07598 transcript:snap_masked-scaffold417_size177606-processed-gene-0.2-mRNA-1 annotation:"cuticle protein 7") HSP 1 Score: 55.0694 bits (131), Expect = 2.461e-9 Identity = 31/89 (34.83%), Postives = 45/89 (50.56%), Query Frame = 0 Query: 13 CLLLSLQLTDVEARHRRRIRNQNLSIKRKPI-----KFSYSFDVSDDNVQLYQSQSQTRDDKVVTGEYSWVDALGVRRVTRYRADDTGY 96 CL + L + AR + + N SI + + ++S+ + V+DD Q Y S + RD +VVTGEYS+VD G Y A GY Sbjct: 60 CLAI-LGVATASARPQLGLPNDAGSIGQGVMFDANPQYSFKYQVADDTAQTYISHEEDRDGEVVTGEYSYVDPNGALVTVTYSAGVMGY 147 The following BLAST results are available for this feature:
BLAST of EMLSAG00000008479 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 9
BLAST of EMLSAG00000008479 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000008479 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000008479 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 1
BLAST of EMLSAG00000008479 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 3
BLAST of EMLSAG00000008479 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000008479 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s51:793791..799696- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000008479-691245 ID=EMLSAG00000008479-691245|Name=EMLSAG00000008479|organism=Lepeophtheirus salmonis|type=gene|length=5906bp|location=Sequence derived from alignment at LSalAtl2s51:793791..799696- (Lepeophtheirus salmonis)back to top Add to Basket
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