EMLSAG00000008691, EMLSAG00000008691-691457 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000008691 vs. GO
Match: - (symbol:wu:fc28f08 "wu:fc28f08" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006612 Pfam:PF05485 PROSITE:PS50950 SMART:SM00692 SMART:SM00980 ZFIN:ZDB-GENE-030131-3152 GO:GO:0003676 InterPro:IPR027806 Pfam:PF13359 GeneTree:ENSGT00600000084622 InterPro:IPR027805 Pfam:PF13613 EMBL:CR847939 RefSeq:XP_695963.2 UniGene:Dr.78736 Ensembl:ENSDART00000102518 GeneID:567573 KEGG:dre:567573 OMA:IASERVH OrthoDB:EOG7T1RC3 TreeFam:TF343228 NextBio:20888739 Uniprot:E7EZT8) HSP 1 Score: 46.2098 bits (108), Expect = 1.042e-4 Identity = 31/92 (33.70%), Postives = 44/92 (47.83%), Query Frame = 0 Query: 5 YCVVRGCQSRYFPNSRISRHRIPKDVSTRSKWLKAIGFGESKVNDASRVCSKXFLTXDFLSTPFDQKISNSQGNTPKLMKFRLKQNAVPSIF 96 YC V C+ NS IS H++P D +TR WL I +V+ RVCS+ F DF+ + P + LK+ AVP++F Sbjct: 18 YCCVPFCKISSRFNSVISFHKLPLDRATRKMWLHNIRRKTFEVSPHVRVCSRHFTNDDFIEPSY-----------PTARRL-LKKGAVPTLF 97
BLAST of EMLSAG00000008691 vs. C. finmarchicus
Match: gi|592893187|gb|GAXK01065188.1| (TSA: Calanus finmarchicus comp2228244_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 6.260e-1 Identity = 21/78 (26.92%), Postives = 34/78 (43.59%), Query Frame = 0 Query: 42 FGESKVNDASRVCSKXFLTXDFLSTPFDQKISNSQGNTPKLMKFRLKQNAVPSIFPKKNVCGVHTFPTQRILSIDDVI 119 F S R+C++ T D + PF+ ++++S NT VP + PK+N + F T I +VI Sbjct: 84 FSSSPSRHPPRLCAQLLKTNDSEACPFNIRMTDSATNT----------TYVPRVLPKRNSAKMVLFSTHSNAPITNVI 287
BLAST of EMLSAG00000008691 vs. L. salmonis peptides
Match: EMLSAP00000008691 (pep:novel supercontig:LSalAtl2s:LSalAtl2s539:253853:256589:1 gene:EMLSAG00000008691 transcript:EMLSAT00000008691 description:"maker-LSalAtl2s539-augustus-gene-1.14") HSP 1 Score: 461.84 bits (1187), Expect = 1.494e-166 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0 Query: 1 MMNSYCVVRGCQSRYFPNSRISRHRIPKDVSTRSKWLKAIGFGESKVNDASRVCSKXFLTXDFLSTPFDQKISNSQGNTPKLMKFRLKQNAVPSIFPKKNVCGVHTFPTQRILSIDDVILCLNETHLPSGVMSYFDFEKEQWLFMGMDYVNGGSPHVMFSVVLDQELKINAWKRDIPVSKAIFSRFLCEGKLRSIKELYNIIQRIKCLSEKCWCLLSLHGMGQR 224 MMNSYCVVRGCQSRYFPNSRISRHRIPKDVSTRSKWLKAIGFGESKVNDASRVCSKXFLTXDFLSTPFDQKISNSQGNTPKLMKFRLKQNAVPSIFPKKNVCGVHTFPTQRILSIDDVILCLNETHLPSGVMSYFDFEKEQWLFMGMDYVNGGSPHVMFSVVLDQELKINAWKRDIPVSKAIFSRFLCEGKLRSIKELYNIIQRIKCLSEKCWCLLSLHGMGQR Sbjct: 1 MMNSYCVVRGCQSRYFPNSRISRHRIPKDVSTRSKWLKAIGFGESKVNDASRVCSKXFLTXDFLSTPFDQKISNSQGNTPKLMKFRLKQNAVPSIFPKKNVCGVHTFPTQRILSIDDVILCLNETHLPSGVMSYFDFEKEQWLFMGMDYVNGGSPHVMFSVVLDQELKINAWKRDIPVSKAIFSRFLCEGKLRSIKELYNIIQRIKCLSEKCWCLLSLHGMGQR 224
BLAST of EMLSAG00000008691 vs. L. salmonis peptides
Match: EMLSAP00000002814 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1623:31398:32936:1 gene:EMLSAG00000002814 transcript:EMLSAT00000002814 description:"augustus-LSalAtl2s1623-processed-gene-0.5") HSP 1 Score: 64.3142 bits (155), Expect = 1.476e-12 Identity = 53/209 (25.36%), Postives = 90/209 (43.06%), Query Frame = 0 Query: 2 MNSYCVVRGCQSRYFP------------NSRISRHRIPKDVSTRSKWLKAIGFGESKVNDASRVCSKXFLTXDFLSTPFDQKISNSQGNTPKLMKFRLKQNAVPSIFP--------KKNVCGVHTFPTQRILSID-----------DVILCLNETH-------LPSGVMSYFDFEKEQWLFMGMDYVNGGSPHVMFSVVLDQELKINAW 172 M CVV GC+S Y P N +I H PKD + R KW++AI + S +C+ F + D + P D + + N P L++ LK++A+P+ FP ++ V + LSID D +L L+E + P + F+ K++ LF + + ++FS+ ++ ++ I W Sbjct: 1 MGKACVVPGCRSGYKPLKSENNTNVIAFNKKIGYHMFPKDEALRKKWIQAIPRKNWEPTKYSAICALHFDSSDLRTEPQDS--NKFRRNKPNLIRKVLKKDAIPTKFPSVPFHNPRRRTVVRSENDLSPCRLSIDHEKSINTLDTVDAVLTLDELNSKLDRGLYPEKIFDKFNKVKKELLFHSICDTDSHGFTILFSLKVNSDMSIQIW 207
BLAST of EMLSAG00000008691 vs. L. salmonis peptides
Match: EMLSAP00000012721 (pep:novel supercontig:LSalAtl2s:LSalAtl2s965:308987:310501:-1 gene:EMLSAG00000012721 transcript:EMLSAT00000012721 description:"augustus-LSalAtl2s965-processed-gene-3.12") HSP 1 Score: 58.5362 bits (140), Expect = 2.502e-10 Identity = 36/111 (32.43%), Postives = 59/111 (53.15%), Query Frame = 0 Query: 2 MNSYCVVRGCQSRY---FPNSRISRHRIPKDVSTRSKWLKAIGF---GESKVNDASRVCSKXFLTXDFLSTPFDQKISNSQGNTPKLMKFRLKQNAVPSIFPKKNVCGVHT 106 M + C + C+SRY ++ H PKD S + WL A+ GE + + SRVCS F F++ D++ Q ++ +L++ LK+NAVP+I PKK +++ Sbjct: 1 MPNNCCIPHCKSRYKGYLKRYGVTLHVFPKDASIKDAWLHAVSSQMKGEYEPSIYSRVCSLHFDDQSFVNESSDERRKYRQTSSKQLVRRYLKRNAVPNIIPKKEPLKINS 111
BLAST of EMLSAG00000008691 vs. L. salmonis peptides
Match: EMLSAP00000002611 (pep:novel supercontig:LSalAtl2s:LSalAtl2s151:424347:426407:1 gene:EMLSAG00000002611 transcript:EMLSAT00000002611 description:"augustus-LSalAtl2s151-processed-gene-4.1") HSP 1 Score: 55.8398 bits (133), Expect = 1.718e-9 Identity = 64/244 (26.23%), Postives = 105/244 (43.03%), Query Frame = 0 Query: 1 MMNSYCVVRGCQSRYF--PN-SRISRHRIPKDVSTRSKWLKAI---GFGESKVNDASRVCSKXFLTXDFLSTPFDQK---ISNSQGNTPKLMKFRLKQNAVPSIFPK--KNVCGVHT-FPTQRILSI-------DDVILCLNETHLPSGVMSYFDF-----------------EKEQWLFMGMDYVNGGSPHVMFSVVLDQELKINAWKRDIPVSKAIFSRFLCEGKLRSIKELYNIIQRIKCL 208 +M + C V C S Y P+ +R+S H P D S++ WL+AI G + SRVCS F DF+ D K S G+ KL K LK AVPSIFP K + V + PT R S +D++ L V+ + D ++ F + + + FSV+++++L N + +++ + ++ + K+ S+ L NI+ +K + Sbjct: 137 IMPNKCCVPKCTSGYDGKPSIARLSLHSFPLDKSSKGAWLRAIPRDSNGTWAPSKYSRVCSLHFHEDDFVYESADHKRKYRSYGVGDN-KLQKRYLKPGAVPSIFPNLPKYLSPVKSQRPTSRATSSARISKENEDIVEAQQSLFLKDSVIDFSDLCLKCGDEKFPTNVHWRRTEDSIQFYCLSELCSDFVEIEFSVMINRDLTFNLYYKNVNLDRSCVNPLTTNRKITSVSLLQNILSHMKSI 379
BLAST of EMLSAG00000008691 vs. L. salmonis peptides
Match: EMLSAP00000008919 (pep:novel supercontig:LSalAtl2s:LSalAtl2s554:629677:631607:1 gene:EMLSAG00000008919 transcript:EMLSAT00000008919 description:"augustus-LSalAtl2s554-processed-gene-6.3") HSP 1 Score: 55.0694 bits (131), Expect = 2.478e-9 Identity = 56/244 (22.95%), Postives = 101/244 (41.39%), Query Frame = 0 Query: 3 NSYCVVRGCQSRY------FPNSRISRHRIPKDVSTRSKWLKAI-----GFGESKVNDASRVCSKXFLTXDFLSTPFDQKISNSQGNTPKLMKFRL-KQNAVPSIFP--------------------------KKNVCGVHTFPTQRILSIDDVILCLNETHLPSGVMSYFDFEKEQWLFMGMDYVNGGSPHVMFSVVLDQELKINAWKRDIPVSKAIFSRFLCEGKLRSIKELYNIIQRIKCL 208 NS C V C++ Y NS+I+ H P ++ +KW KAI G++ + VCS F D+ Q ++N Q +K RL K++A+PS FP K N + ++ ++DD+ + + +PS + F E + +D + G P ++FS+V+D L ++ + ++ S + K+ + E+ I+ +K L Sbjct: 4 NSTCTVPDCKTGYRSNKNKETNSKIALHGFPTNIDMINKWKKAIPRTWEQDGKTLNIKNAVVCSLHFTNNDYRH----QSLTNDQP-----LKLRLLKKDAIPSQFPGPSYFSKKPIKCRKTKATNRRKSENQKINHMNQELINSDKVYTLDDLKEKIKKYTIPSNAL--FISEDTSLTYFLIDKPSLGPPTIVFSLVIDSNLTFEMYQEKKLLPLSVVSHIVPSKKIHTCSEVLKILATLKGL 236
BLAST of EMLSAG00000008691 vs. L. salmonis peptides
Match: EMLSAP00000011633 (pep:novel supercontig:LSalAtl2s:LSalAtl2s806:113709:119311:1 gene:EMLSAG00000011633 transcript:EMLSAT00000011633 description:"maker-LSalAtl2s806-augustus-gene-0.29") HSP 1 Score: 50.0618 bits (118), Expect = 1.706e-7 Identity = 51/224 (22.77%), Postives = 83/224 (37.05%), Query Frame = 0 Query: 22 SRHRIPKDVSTRSKWLKAIGFGESKVNDASRVCSKXFLTXDFLSTPFDQKISNSQGNTPKLMKFRLKQNAVPSIFPK-------------------------------KNVCGVHTFPTQRIL-----SIDDVILCLNETHLPSGVMSYFDFEKEQWLFMGMDYVNGGSPHVMFSVVLDQELKINAWKRDIPVSKAIFSRFLCEGKLRSIKELYNIIQRIKCLS 209 S H P+D R +W ++I F + K D + VCS FL D+ +++Q L K LK+ A PS+FP+ V + PT L ++D +L L+ H SY W FM + + P + FS+ + L+ W I V K L ++ S ++ +++ +K S Sbjct: 30 SLHLFPRDKVLRERWRQSIPFYKHKPGDHTYVCSLHFLKSDY------GGFTSNQEEASDLKKITLKKGAKPSVFPELLDLQARLDEVSQLDDDFYVRDFQNDDEGMYSAVTAKKSLPTINSLQDLQDNLDLKLLSLDIVHTYHEGTSY---SAADWTFMMVTQDHNNVPTLKFSLKIGANLEYEIWCHQIRVHKCKVKHILESDRINSAMQVIQLLEFLKSYS 244
BLAST of EMLSAG00000008691 vs. L. salmonis peptides
Match: EMLSAP00000012011 (pep:novel supercontig:LSalAtl2s:LSalAtl2s854:587351:589172:1 gene:EMLSAG00000012011 transcript:EMLSAT00000012011 description:"maker-LSalAtl2s854-augustus-gene-5.27") HSP 1 Score: 49.6766 bits (117), Expect = 1.851e-7 Identity = 32/96 (33.33%), Postives = 47/96 (48.96%), Query Frame = 0 Query: 6 CVVRGCQSRYFPNSRISRHRIPKDVSTRSKWLKAIGFGESKVNDASRVCSKXFLTXDFLSTPFDQKISNSQGNTPKLMKFRLKQNAVPSIFPKKNV 101 C V GC+ R +S HR PKD+S R KW++ G + +++RVC F DF +K + P K RL++ +VPS+ K V Sbjct: 6 CSVIGCEHR----GPVSYHRFPKDLSVRQKWIQFCKRGPALNPESARVCGLHFTERDF------EKHVEREHLGPSFNKRRLRRESVPSVRTLKRV 91
BLAST of EMLSAG00000008691 vs. nr
Match: gi|1073700443|gb|JAT93278.1| (hypothetical protein, partial [Amblyomma aureolatum]) HSP 1 Score: 56.9954 bits (136), Expect = 9.151e-7 Identity = 34/98 (34.69%), Postives = 47/98 (47.96%), Query Frame = 0 Query: 2 MNSYCVVRGCQSRY---FPNSRISRHRIPKDVSTRSKWLKAIGFGESKVNDASRVCSKXFLTXDFLSTPFDQKISNSQGNTPKLMKFRLKQNAVPSIF 96 M S C VR C+S Y P+ + HR P D R+ WL+A+G + S VC K FL D + + + + L + RLK AVPS+F Sbjct: 1 MPSSCCVRNCKSNYGVRCPSVCVRVHRFPTDPKLRAAWLRALGREDFIPTRYSVVCEKHFLPSDLIKSATYTDVRTGEVIEVPLKRHRLKHGAVPSVF 98 The following BLAST results are available for this feature:
BLAST of EMLSAG00000008691 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 1
BLAST of EMLSAG00000008691 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000008691 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 7
BLAST of EMLSAG00000008691 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000008691 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000008691 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000008691 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s539:253853..256589+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000008691-691457 ID=EMLSAG00000008691-691457|Name=EMLSAG00000008691|organism=Lepeophtheirus salmonis|type=gene|length=2737bp|location=Sequence derived from alignment at LSalAtl2s539:253853..256589+ (Lepeophtheirus salmonis)back to top Add to Basket
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