EMLSAG00000009406, EMLSAG00000009406-692172 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000009406
Unique NameEMLSAG00000009406-692172
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000009406 vs. GO
Match: - (symbol:AN1162 species:162425 "Aspergillus nidulans" [GO:0003746 "translation elongation factor activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005853 "eukaryotic translation elongation factor 1 complex" evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA] InterPro:IPR001326 InterPro:IPR014038 Pfam:PF00736 PROSITE:PS00824 PROSITE:PS00825 SMART:SM00888 EMBL:AACD01000016 EMBL:BN001308 GO:GO:0003746 GO:GO:0005085 Gene3D:1.20.1050.10 InterPro:IPR010987 SUPFAM:SSF47616 GO:GO:0043087 GO:GO:0005853 eggNOG:COG2092 HOGENOM:HOG000207273 KO:K03232 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54984 InterPro:IPR018940 Pfam:PF10587 OMA:YESEFAS OrthoDB:EOG7M3J9X RefSeq:XP_658766.1 ProteinModelPortal:Q5BE68 SMR:Q5BE68 STRING:162425.CADANIAP00001464 EnsemblFungi:CADANIAT00001464 GeneID:2876939 KEGG:ani:AN1162.2 Uniprot:Q5BE68)

HSP 1 Score: 47.7506 bits (112), Expect = 3.019e-6
Identity = 32/106 (30.19%), Postives = 47/106 (44.34%), Query Frame = 0 
Query:   13 PTTNKIEEDGDDVDLFGSSSDEENTQIK----------FVFTRSTSKSDFDCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRER--RRLTLRICCE 106
            P      ED DD+DLFGS  +E+    K                  K        LEVKPWDDET++  + AN + I+K+G V  A + +      ++L + +  E
Sbjct:   92 PKDKPAAEDDDDMDLFGSDEEEDEEVAKKHAANLAAYKAKKEAKGPKPAAKSIVTLEVKPWDDETNLQEMEANVRAIEKDGLVWGASKFVAVGFGIKKLQINMVVE 197
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BLAST of EMLSAG00000009406 vs. GO
Match: - (symbol:AO090038000287 species:5062 "Aspergillus oryzae" [GO:0005840 "ribosome" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005853 "eukaryotic translation elongation factor 1 complex" evidence=IEA] [GO:0003746 "translation elongation factor activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA] InterPro:IPR001326 InterPro:IPR014038 Pfam:PF00736 PROSITE:PS00824 PROSITE:PS00825 SMART:SM00888 InterPro:IPR004046 Pfam:PF00043 EMBL:AP007169 GO:GO:0003746 Gene3D:1.20.1050.10 InterPro:IPR010987 SUPFAM:SSF47616 GO:GO:0005853 HOGENOM:HOG000207273 KO:K03232 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54984 InterPro:IPR018940 Pfam:PF10587 OMA:KPSDAFP OrthoDB:EOG7M3J9X RefSeq:XP_001825229.1 ProteinModelPortal:Q2U2W9 SMR:Q2U2W9 STRING:5062.CADAORAP00008893 EnsemblFungi:CADAORAT00009077 GeneID:5997324 KEGG:aor:AOR_1_480074 Uniprot:Q2U2W9)

HSP 1 Score: 47.7506 bits (112), Expect = 3.049e-6
Identity = 34/104 (32.69%), Postives = 51/104 (49.04%), Query Frame = 0 
Query:    3 YTTCKSVAIPPTTN---KIEEDGDDVDLFGSSSDEENTQIKFVFTRS-----------TSKSDFDCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELL 92
            YTT    A    TN   K  ++ DD+DLFGS  +EE+ ++      +             K        L+VKPWDDET++  + AN + I+K+G V SA + +
Sbjct:   78 YTTYGPEATELPTNPKDKPADEDDDMDLFGSDDEEEDPEVARKHAENLAAYKAKKEAKGPKPAAKSIVTLDVKPWDDETNLEEMEANVRAIEKDGLVWSASKWV 181
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BLAST of EMLSAG00000009406 vs. GO
Match: - (symbol:CPAR2_401960 species:5480 "Candida parapsilosis" [GO:0005840 "ribosome" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005853 "eukaryotic translation elongation factor 1 complex" evidence=IEA] [GO:0003746 "translation elongation factor activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA] InterPro:IPR001326 InterPro:IPR014038 Pfam:PF00736 PROSITE:PS00824 PROSITE:PS00825 SMART:SM00888 GO:GO:0003746 InterPro:IPR010987 SUPFAM:SSF47616 GO:GO:0005853 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54984 InterPro:IPR018940 Pfam:PF10587 OrthoDB:EOG7M3J9X EMBL:HE605208 Uniprot:G8BID0)

HSP 1 Score: 47.7506 bits (112), Expect = 3.530e-6
Identity = 31/85 (36.47%), Postives = 44/85 (51.76%), Query Frame = 0 
Query:   19 EEDGDDVDLFGSSSDEENTQIKFVFTRSTSKSDFDCTDL-----------LEVKPWDDETDMSTILANCKTIQKEGSVLSAHELL 92
            EED DDVDLFGS  DE + + + +  +  ++                   L+VKPWDDETD+  +L N K IQ +G    AH+ +
Sbjct:   85 EEDDDDVDLFGSDDDEVDEEAEKLKQQRLAEYAAKKAAKGPKPAAKSIVTLDVKPWDDETDLDELLTNVKNIQMDGLTWGAHQWI 169
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BLAST of EMLSAG00000009406 vs. GO
Match: - (symbol:CAGL0F08547g "Strain CBS138 chromosome F complete sequence" species:284593 "Candida glabrata CBS 138" [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR001326 InterPro:IPR014038 Pfam:PF00736 PROSITE:PS00824 PROSITE:PS00825 SMART:SM00888 GO:GO:0005829 GO:GO:0003746 EMBL:CR380952 InterPro:IPR010987 SUPFAM:SSF47616 GO:GO:0005853 HOGENOM:HOG000207273 KO:K03232 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54984 InterPro:IPR018940 Pfam:PF10587 OMA:YESEFAS OrthoDB:EOG7M3J9X RefSeq:XP_446340.1 ProteinModelPortal:Q6FTV4 SMR:Q6FTV4 GeneID:2887849 KEGG:cgr:CAGL0F08547g Uniprot:Q6FTV4)

HSP 1 Score: 47.3654 bits (111), Expect = 3.578e-6
Identity = 33/91 (36.26%), Postives = 44/91 (48.35%), Query Frame = 0 
Query:   25 VDLFGSSS--DEENTQIKF-----VFTRSTSKSDFDCTD---LLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICC 105
            VDLFGS    DEE  ++K         R  +K           L+VKPWDDETD+  +LAN K +Q +G    AH+ +        L+I C
Sbjct:   83 VDLFGSDDEVDEEAEKLKAQRLEEYNKRKAAKGPKPAAKSIVTLDVKPWDDETDLEEMLANTKAVQMDGLNWGAHQFIPIGFGIKKLQINC 173
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BLAST of EMLSAG00000009406 vs. GO
Match: - (symbol:EFB1 species:5478 "Candida glabrata" [GO:0005829 "cytosol" evidence=IDA] [GO:0005840 "ribosome" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0005853 "eukaryotic translation elongation factor 1 complex" evidence=IEA] [GO:0003746 "translation elongation factor activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA] InterPro:IPR001326 InterPro:IPR014038 Pfam:PF00736 PROSITE:PS00824 PROSITE:PS00825 SMART:SM00888 GO:GO:0005829 GO:GO:0003746 EMBL:CR380952 InterPro:IPR010987 SUPFAM:SSF47616 GO:GO:0005853 HOGENOM:HOG000207273 KO:K03232 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54984 InterPro:IPR018940 Pfam:PF10587 OMA:YESEFAS OrthoDB:EOG7M3J9X RefSeq:XP_446340.1 ProteinModelPortal:Q6FTV4 SMR:Q6FTV4 GeneID:2887849 KEGG:cgr:CAGL0F08547g Uniprot:Q6FTV4)

HSP 1 Score: 47.3654 bits (111), Expect = 3.578e-6
Identity = 33/91 (36.26%), Postives = 44/91 (48.35%), Query Frame = 0 
Query:   25 VDLFGSSS--DEENTQIKF-----VFTRSTSKSDFDCTD---LLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICC 105
            VDLFGS    DEE  ++K         R  +K           L+VKPWDDETD+  +LAN K +Q +G    AH+ +        L+I C
Sbjct:   83 VDLFGSDDEVDEEAEKLKAQRLEEYNKRKAAKGPKPAAKSIVTLDVKPWDDETDLEEMLANTKAVQMDGLNWGAHQFIPIGFGIKKLQINC 173
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BLAST of EMLSAG00000009406 vs. GO
Match: - (symbol:An08g03490 "Function: beta subunit of eukaryotic elongation factor 1" species:425011 "Aspergillus niger CBS 513.88" [GO:0005622 "intracellular" evidence=IDA] InterPro:IPR001326 InterPro:IPR014038 Pfam:PF00736 PROSITE:PS00824 SMART:SM00888 GO:GO:0005622 GO:GO:0003746 Gene3D:1.20.1050.10 InterPro:IPR010987 SUPFAM:SSF47616 GO:GO:0005853 HOGENOM:HOG000207273 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54984 InterPro:IPR018940 Pfam:PF10587 OrthoDB:EOG7M3J9X EMBL:AM270165 ProteinModelPortal:A2QQR9 SMR:A2QQR9 STRING:5061.CADANGAP00006543 EnsemblFungi:CADANGAT00006668 Uniprot:A2QQR9)

HSP 1 Score: 48.1358 bits (113), Expect = 4.213e-6
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 0 
Query:   13 PTTNKIEEDGDDVDLFGSSSDE--------------ENTQIKFVFTRSTSKSDFDCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRER--RRLTLRICCE 106
            PT  K   D DD+DLFGS  +E              E  + K    +  +KS       LEVKPWDDETD+ T+ AN + I+ +G V  A + +      ++L + +  E
Sbjct:   89 PTNPKAANDDDDMDLFGSDEEEEDPEVVKEREARLAEYRKKKEAKPKPVAKSLV----TLEVKPWDDETDIETMEANVRAIEIDGLVWGASKFVAVGYGIKKLQINLVVE 194
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BLAST of EMLSAG00000009406 vs. GO
Match: - (symbol:ef1 species:5061 "Aspergillus niger" [GO:0003746 "translation elongation factor activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005840 "ribosome" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005853 "eukaryotic translation elongation factor 1 complex" evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA] InterPro:IPR001326 InterPro:IPR014038 Pfam:PF00736 PROSITE:PS00824 SMART:SM00888 GO:GO:0005622 GO:GO:0003746 Gene3D:1.20.1050.10 InterPro:IPR010987 SUPFAM:SSF47616 GO:GO:0005853 HOGENOM:HOG000207273 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54984 InterPro:IPR018940 Pfam:PF10587 OrthoDB:EOG7M3J9X EMBL:AM270165 ProteinModelPortal:A2QQR9 SMR:A2QQR9 STRING:5061.CADANGAP00006543 EnsemblFungi:CADANGAT00006668 Uniprot:A2QQR9)

HSP 1 Score: 48.1358 bits (113), Expect = 4.213e-6
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 0 
Query:   13 PTTNKIEEDGDDVDLFGSSSDE--------------ENTQIKFVFTRSTSKSDFDCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRER--RRLTLRICCE 106
            PT  K   D DD+DLFGS  +E              E  + K    +  +KS       LEVKPWDDETD+ T+ AN + I+ +G V  A + +      ++L + +  E
Sbjct:   89 PTNPKAANDDDDMDLFGSDEEEEDPEVVKEREARLAEYRKKKEAKPKPVAKSLV----TLEVKPWDDETDIETMEANVRAIEIDGLVWGASKFVAVGYGIKKLQINLVVE 194
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BLAST of EMLSAG00000009406 vs. GO
Match: - (symbol:EFB1 "Translation elongation factor 1 beta" species:559292 "Saccharomyces cerevisiae S288c" [GO:0006414 "translational elongation" evidence=IEA;IMP] [GO:0003746 "translation elongation factor activity" evidence=IEA] [GO:1990145 "maintenance of translational fidelity" evidence=IMP] [GO:0032232 "negative regulation of actin filament bundle assembly" evidence=IDA] [GO:0006449 "regulation of translational termination" evidence=IGI] [GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IDA] [GO:0005853 "eukaryotic translation elongation factor 1 complex" evidence=IEA;IMP] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001326 InterPro:IPR014038 Pfam:PF00736 PROSITE:PS00824 PROSITE:PS00825 SMART:SM00888 UniPathway:UPA00345 SGD:S000000003 EMBL:BK006935 GO:GO:0003746 GO:GO:0005085 InterPro:IPR010987 SUPFAM:SSF47616 EMBL:L22015 GO:GO:1990145 GO:GO:0006449 GO:GO:0005853 PDB:1F60 PDB:1G7C PDB:1IJE PDB:1IJF PDB:2B7B PDB:2B7C PDBsum:1F60 PDBsum:1G7C PDBsum:1IJE PDBsum:1IJF PDBsum:2B7B PDBsum:2B7C eggNOG:COG2092 HOGENOM:HOG000207273 KO:K03232 OMA:FADETED Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54984 GeneTree:ENSGT00390000011747 InterPro:IPR018940 Pfam:PF10587 OrthoDB:EOG7M3J9X EMBL:D14080 PIR:S43445 RefSeq:NP_009398.1 ProteinModelPortal:P32471 SMR:P32471 BioGrid:31787 DIP:DIP-6445N IntAct:P32471 MINT:MINT-441798 STRING:4932.YAL003W SWISS-2DPAGE:P32471 PaxDb:P32471 PeptideAtlas:P32471 EnsemblFungi:YAL003W GeneID:851260 KEGG:sce:YAL003W BioCyc:YEAST:G3O-28818-MONOMER EvolutionaryTrace:P32471 NextBio:968216 PRO:PR:P32471 Genevestigator:P32471 GO:GO:0032232 GO:GO:0006414 Uniprot:P32471)

HSP 1 Score: 45.8246 bits (107), Expect = 1.625e-5
Identity = 20/48 (41.67%), Postives = 29/48 (60.42%), Query Frame = 0 
Query:   58 LEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICC 105
            L+VKPWDDET++  ++AN K I+ EG    AH+ +        L+I C
Sbjct:  125 LDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINC 172
[Close]
BLAST of EMLSAG00000009406 vs. GO
Match: - (symbol:EFB1 "Putative uncharacterized protein EFB1" species:237561 "Candida albicans SC5314" [GO:0003746 "translation elongation factor activity" evidence=IGI;ISS] [GO:0005840 "ribosome" evidence=IGI;ISS] [GO:0006414 "translational elongation" evidence=IGI;ISS] [GO:0009986 "cell surface" evidence=IDA] InterPro:IPR001326 InterPro:IPR014038 Pfam:PF00736 PROSITE:PS00824 PROSITE:PS00825 SMART:SM00888 GO:GO:0009986 GO:GO:0005840 GO:GO:0003746 EMBL:AACQ01000057 EMBL:AACQ01000056 GO:GO:0005853 KO:K03232 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54984 InterPro:IPR018940 Pfam:PF10587 OrthoDB:EOG7M3J9X RefSeq:XP_717242.1 RefSeq:XP_717318.1 ProteinModelPortal:Q5A652 SMR:Q5A652 GeneID:3641063 GeneID:3641125 KEGG:cal:CaO19.11319 KEGG:cal:CaO19.3838 CGD:CAL0079190 Uniprot:Q5A652)

HSP 1 Score: 45.4394 bits (106), Expect = 2.040e-5
Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 0 
Query:   58 LEVKPWDDETDMSTILANCKTIQKEGSVLSAHELL 92
            L+VKPWDDETD+  +L N K I+ EG    AH+ +
Sbjct:  149 LDVKPWDDETDLDELLTNVKAIEMEGLTWGAHQWI 183
[Close]
BLAST of EMLSAG00000009406 vs. GO
Match: - (symbol:EFB1 species:5476 "Candida albicans" [GO:0003746 "translation elongation factor activity" evidence=IGI;ISS] [GO:0006414 "translational elongation" evidence=IGI;ISS] [GO:0005840 "ribosome" evidence=IGI;ISS] [GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005853 "eukaryotic translation elongation factor 1 complex" evidence=IEA] InterPro:IPR001326 InterPro:IPR014038 Pfam:PF00736 PROSITE:PS00824 PROSITE:PS00825 SMART:SM00888 GO:GO:0009986 GO:GO:0005840 GO:GO:0003746 EMBL:AACQ01000057 EMBL:AACQ01000056 GO:GO:0005853 KO:K03232 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54984 InterPro:IPR018940 Pfam:PF10587 OrthoDB:EOG7M3J9X RefSeq:XP_717242.1 RefSeq:XP_717318.1 ProteinModelPortal:Q5A652 SMR:Q5A652 GeneID:3641063 GeneID:3641125 KEGG:cal:CaO19.11319 KEGG:cal:CaO19.3838 CGD:CAL0079190 Uniprot:Q5A652)

HSP 1 Score: 45.4394 bits (106), Expect = 2.040e-5
Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 0 
Query:   58 LEVKPWDDETDMSTILANCKTIQKEGSVLSAHELL 92
            L+VKPWDDETD+  +L N K I+ EG    AH+ +
Sbjct:  149 LDVKPWDDETDLDELLTNVKAIEMEGLTWGAHQWI 183
[Close]
BLAST of EMLSAG00000009406 vs. C. finmarchicus
Match: gi|592788352|gb|GAXK01166216.1| (TSA: Calanus finmarchicus comp280_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.8246 bits (107), Expect = 6.600e-6
Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 0 
Query:   57 LLEVKPWDDETDMSTILANCKTIQKEGSVLSA 88
            L +VKPWDDETDM  +L NCKTI+ +G +  A
Sbjct:  500 LFDVKPWDDETDMDEMLKNCKTIEMDGLLWGA 595
[Close]
BLAST of EMLSAG00000009406 vs. C. finmarchicus
Match: gi|592785792|gb|GAXK01168776.1| (TSA: Calanus finmarchicus comp388_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 39.2762 bits (90), Expect = 1.016e-3
Identity = 21/49 (42.86%), Postives = 29/49 (59.18%), Query Frame = 0 
Query:   57 LLEVKPWDDETDMSTILANCKTIQKEGSVLSAHXXXXXXXXXXXXXICC 105
            L +VKPWDDETD + +L  CK I+ +G V  A +L+        L+I C
Sbjct:  156 LFDVKPWDDETDHAKMLEACKGIEMDGLVWGASKLVAIGYGIKKLQIMC 302
[Close]
BLAST of EMLSAG00000009406 vs. C. finmarchicus
Match: gi|592891491|gb|GAXK01066884.1| (TSA: Calanus finmarchicus comp4273_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 34.6538 bits (78), Expect = 4.650e-2
Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = 0 
Query:   57 LLEVKPWDDETDMSTILANCKTIQKEGSVLSA 88
            L +VKPW D+TD+  + A C  I+ EG V  A
Sbjct:  590 LFDVKPWADDTDLDAMKAACMGIEMEGLVWGA 685
[Close]
BLAST of EMLSAG00000009406 vs. C. finmarchicus
Match: gi|592883480|gb|GAXK01074895.1| (TSA: Calanus finmarchicus comp275273_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 5.531e+0
Identity = 13/55 (23.64%), Postives = 28/55 (50.91%), Query Frame = 0 
Query:   58 LEVKPWDDETDMSTILANCKTIQKEGSVLSAHXXXXXXXXXXXXXICCEAISESP 112
             E+KP+DD  D   +L +CK ++ EG +     ++     +  + + C  +++ P
Sbjct:  405 FEIKPFDDVEDEEGVLEDCKDLEFEGVIWEMGNIIPVSEGKSKITLGCTVMNDDP 569
[Close]
BLAST of EMLSAG00000009406 vs. C. finmarchicus
Match: gi|592883482|gb|GAXK01074893.1| (TSA: Calanus finmarchicus comp275273_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 5.859e+0
Identity = 13/55 (23.64%), Postives = 28/55 (50.91%), Query Frame = 0 
Query:   58 LEVKPWDDETDMSTILANCKTIQKEGSVLSAHXXXXXXXXXXXXXICCEAISESP 112
             E+KP+DD  D   +L +CK ++ EG +     ++     +  + + C  +++ P
Sbjct:  405 FEIKPFDDVEDEEGVLEDCKDLEFEGVIWEMGNIIPVSEGKSKITLGCTVMNDDP 569
[Close]
BLAST of EMLSAG00000009406 vs. C. finmarchicus
Match: gi|592883483|gb|GAXK01074892.1| (TSA: Calanus finmarchicus comp275273_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 6.825e+0
Identity = 13/55 (23.64%), Postives = 28/55 (50.91%), Query Frame = 0 
Query:   58 LEVKPWDDETDMSTILANCKTIQKEGSVLSAHXXXXXXXXXXXXXICCEAISESP 112
             E+KP+DD  D   +L +CK ++ EG +     ++     +  + + C  +++ P
Sbjct:  405 FEIKPFDDVEDEEGVLEDCKDLEFEGVIWEMGNIIPVSEGKSKITLGCTVMNDDP 569
[Close]
BLAST of EMLSAG00000009406 vs. L. salmonis peptides
Match: EMLSAP00000009406 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5:1566822:1570286:-1 gene:EMLSAG00000009406 transcript:EMLSAT00000009406 description:"snap-LSalAtl2s5-processed-gene-15.31")

HSP 1 Score: 257.684 bits (657), Expect = 2.903e-89
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 
Query:    1 MNYTTCKSVAIPPTTNKIEEDGDDVDLFGSSSDEENTQIKFVFTRSTSKSDFDCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICCEAISESPGCTRSRIEDRHQSD 126
            MNYTTCKSVAIPPTTNKIEEDGDDVDLFGSSSDEENTQIKFVFTRSTSKSDFDCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICCEAISESPGCTRSRIEDRHQSD
Sbjct:    1 MNYTTCKSVAIPPTTNKIEEDGDDVDLFGSSSDEENTQIKFVFTRSTSKSDFDCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICCEAISESPGCTRSRIEDRHQSD 126
[Close]
BLAST of EMLSAG00000009406 vs. L. salmonis peptides
Match: EMLSAP00000000822 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1136:94571:98209:-1 gene:EMLSAG00000000822 transcript:EMLSAT00000000822 description:"maker-LSalAtl2s1136-snap-gene-1.88")

HSP 1 Score: 90.1225 bits (222), Expect = 7.571e-22
Identity = 53/112 (47.32%), Postives = 67/112 (59.82%), Query Frame = 0 
Query:    5 TCKSVAIPPTTNKIEEDGDDVDLFGSSSDEENT---------QIKFVFTRSTSKSDF--DCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICC 105
            + KSVA  P T ++EED DDVDLFGSSSDEE           ++K    + + K       + LL+VKPWDDETDM+ IL NCKTIQKEG V  AH+L+        L++ C
Sbjct:  406 SGKSVAAAPATKQVEED-DDVDLFGSSSDEEEXAQKARVREERLKAYHEKKSKKPTLIAKTSVLLDVKPWDDETDMNAILENCKTIQKEGLVWGAHKLVPIGYGIKKLQVMC 516
[Close]
BLAST of EMLSAG00000009406 vs. SwissProt
Match: gi|461993|sp|P32192.2|EF1D_ARTSA (RecName: Full=Elongation factor 1-delta; Short=EF-1-delta)

HSP 1 Score: 54.299 bits (129), Expect = 1.034e-8
Identity = 37/110 (33.64%), Postives = 54/110 (49.09%), Query Frame = 0 
Query:    4 TTCKSVAIPPTTNKIEEDGDDVDLFGS---SSDEENTQIKFVFTRSTSKSD-----FDCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICC 105
            TT   +A PP     EE+ DDVDLFGS   S + E  + + +      KS         + LL++KPWDDETDM  +    ++I  +G +  A +L+        L+I C
Sbjct:   97 TTGAKLAAPPQK---EEEDDDVDLFGSDEESEEAEKVKAERIAAYQAKKSHKPTVIAKSSILLDIKPWDDETDMGAMEREVRSIAMDGLIWGASKLVPVAFGVKKLQISC 203
[Close]
BLAST of EMLSAG00000009406 vs. SwissProt
Match: gi|119162|sp|P12262.3|EF1B_ARTSA (RecName: Full=Elongation factor 1-beta; Short=EF-1-beta)

HSP 1 Score: 53.5286 bits (127), Expect = 1.803e-8
Identity = 38/101 (37.62%), Postives = 53/101 (52.48%), Query Frame = 0 
Query:   13 PTTNKIEEDGDDVDLFGS-SSDEENTQIKF----VFTRSTSKSDFDCTD---LLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICC 105
            PT+   EED DDVDLFGS   DEE  +IK      ++   SK          +L++KPWDDETDM+ +    +++Q +G V  A +L+        L I C
Sbjct:   74 PTSASKEED-DDVDLFGSDEEDEEAEKIKAERMKAYSDKKSKKPAIVAKSSVILDIKPWDDETDMAEMEKLVRSVQMDGLVWGAAKLIPLAYGIKKLSIMC 173
[Close]
BLAST of EMLSAG00000009406 vs. SwissProt
Match: gi|232034|sp|P30151.3|EF1B_XENLA (RecName: Full=Elongation factor 1-beta; Short=EF-1-beta; AltName: Full=p30)

HSP 1 Score: 50.0618 bits (118), Expect = 3.209e-7
Identity = 35/97 (36.08%), Postives = 50/97 (51.55%), Query Frame = 0 
Query:   19 EEDGDDVDLFGSSSDEENTQIKFV-------FTRSTSKSD---FDCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICC 105
            EED DD+DLFGS  +EE+   K V       +    SK        + LL+VKPWDDETDM  +    ++IQ +G +  + +L+        L+I C
Sbjct:   97 EEDDDDIDLFGSDDEEESEDAKRVRDERLAQYEAKKSKKPTLIAKSSILLDVKPWDDETDMGKLEECLRSIQMDGLLWGSSKLVPVGYGIKKLQIQC 193
[Close]
BLAST of EMLSAG00000009406 vs. nr
Match: gi|225712196|gb|ACO11944.1| (Elongation factor 1-delta [Lepeophtheirus salmonis] >gi|290562285|gb|ADD38539.1| Elongation factor 1-delta [Lepeophtheirus salmonis])

HSP 1 Score: 89.3521 bits (220), Expect = 1.474e-19
Identity = 53/110 (48.18%), Postives = 66/110 (60.00%), Query Frame = 0 
Query:    7 KSVAIPPTTNKIEEDGDDVDLFGSSSDEEN---------TQIKFVFTRSTSKSDF--DCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICC 105
            KSVA  P T ++EED DDVDLFGSSSDEE           ++K    + + K       + LL+VKPWDDETDM+ IL NCKTIQKEG V  AH+L+        L++ C
Sbjct:   87 KSVAAAPATKQVEED-DDVDLFGSSSDEEEDAQKARVREERLKAYHEKKSKKPTLIAKTSVLLDVKPWDDETDMNAILENCKTIQKEGLVWGAHKLVPIGYGIKKLQVMC 195
[Close]
BLAST of EMLSAG00000009406 vs. nr
Match: gi|225713238|gb|ACO12465.1| (Elongation factor 1-delta [Lepeophtheirus salmonis])

HSP 1 Score: 89.7373 bits (221), Expect = 5.553e-19
Identity = 53/110 (48.18%), Postives = 66/110 (60.00%), Query Frame = 0 
Query:    7 KSVAIPPTTNKIEEDGDDVDLFGSSSDEEN---------TQIKFVFTRSTSKSDF--DCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICC 105
            KSVA  P T ++EED DDVDLFGSSSDEE           ++K    + + K       + LL+VKPWDDETDM+ IL NCKTIQKEG V  AH+L+        L++ C
Sbjct:  192 KSVAAAPATKQVEED-DDVDLFGSSSDEEEDAQKARVREERLKAYHEKKSKKPTLIAKTSVLLDVKPWDDETDMNAILENCKTIQKEGLVWGAHKLVPIGYGIKKLQVMC 300
[Close]
BLAST of EMLSAG00000009406 vs. nr
Match: gi|225713076|gb|ACO12384.1| (Nucleoside diphosphate kinase A 1 [Lepeophtheirus salmonis])

HSP 1 Score: 89.3521 bits (220), Expect = 1.914e-18
Identity = 53/112 (47.32%), Postives = 67/112 (59.82%), Query Frame = 0 
Query:    5 TCKSVAIPPTTNKIEEDGDDVDLFGSSSDEEN---------TQIKFVFTRSTSKSDF--DCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLTLRICC 105
            + KSVA  P T ++EED DDVDLFGSSSDEE           ++K    + + K       + LL+VKPWDDETDM+ IL NCKTIQKEG V  AH+L+        L++ C
Sbjct:  271 SGKSVAAAPATKQVEED-DDVDLFGSSSDEEEDAQKARVREERLKAYHEKKSKKPTLIAKTSVLLDVKPWDDETDMNAILENCKTIQKEGLVWGAHKLVPIGYGIKKLQVMC 381
[Close]
BLAST of EMLSAG00000009406 vs. nr
Match: gi|1089704424|ref|XP_018687734.1| (hypothetical protein AYL99_11468 [Fonsecaea erecta] >gi|1032425837|gb|OAP54367.1| hypothetical protein AYL99_11468 [Fonsecaea erecta])

HSP 1 Score: 60.077 bits (144), Expect = 2.276e-8
Identity = 39/108 (36.11%), Postives = 55/108 (50.93%), Query Frame = 0 
Query:    3 YTTCKSVAIPPTTN------KIEEDGDDVDLFGSSSDEENTQIKFVFTRSTSKSDFDCTDL------------LEVKPWDDETDMSTILANCKTIQKEGSVLSAHELL 92
            +TT    A+  T N      K EED D+VDLFGS  +EE+ ++  V  R    +D+                 L+VKPWDDETDM  ++ N   I+ +G V  AH+L+
Sbjct:   78 FTTYGPEAVAVTHNPKDAPEKAEEDDDEVDLFGSDDEEEDPEV--VAEREKRLADYKKKKEGKAKPAAKSIVTLDVKPWDDETDMDELVKNVLAIEMDGLVWGAHKLV 183
[Close]
BLAST of EMLSAG00000009406 vs. nr
Match: gi|632989489|ref|XP_007883676.1| (PREDICTED: SH3 domain-containing protein C23A1.17-like [Callorhinchus milii])

HSP 1 Score: 58.151 bits (139), Expect = 1.937e-7
Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 0 
Query:   12 PPTTNKIEEDGDDVDLFGSSSDEENTQIKFVFTRSTSKSD-------FDCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELL 92
            P T    EE+ DD+DLFGS  DEE ++I+    R  S+            + LL+VKPW DETDM+ + A  +++Q +G +    +LL
Sbjct:  638 PSTEAPAEEEDDDIDLFGSDEDEEASRIREERIRQYSQRKSKKPALIAKSSILLDVKPWSDETDMAKLEACVRSVQVDGLLWGCSKLL 725
[Close]
BLAST of EMLSAG00000009406 vs. nr
Match: gi|628329732|ref|XP_007744145.1| (elongation factor 1-beta [Cladophialophora psammophila CBS 110553] >gi|589988735|gb|EXJ71546.1| elongation factor 1-beta [Cladophialophora psammophila CBS 110553])

HSP 1 Score: 57.3806 bits (137), Expect = 2.283e-7
Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = 0 
Query:    8 SVAIPP--TTNKIEEDGDDVDLFGSSSDEENTQIKFVFTRSTSKSDF------------DCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELL 92
            +VA+ P     K EED D+VDLFGS  +EE+ ++  V  R    +D+                 L+VKPWDDET+M  ++ N   I+ +G V  AH+L+
Sbjct:   87 AVALNPKDAPEKAEEDEDEVDLFGSDDEEEDPEV--VAEREKRLADYRKKKEGKAKPAAKSIITLDVKPWDDETNMDELVKNVLAIEMDGLVWGAHKLV 183
[Close]
BLAST of EMLSAG00000009406 vs. nr
Match: gi|628264262|ref|XP_007726781.1| (elongation factor 1-beta [Capronia coronata CBS 617.96] >gi|590006451|gb|EXJ81660.1| elongation factor 1-beta [Capronia coronata CBS 617.96])

HSP 1 Score: 56.225 bits (134), Expect = 4.757e-7
Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = 0 
Query:    3 YTTCKSVAIPPTTNKIE----EDGDDVDLFGSSSDEENTQIKFVFTRSTSKSDFDCTDL------------LEVKPWDDETDMSTILANCKTIQKEGSVLSAHELL 92
            +TT    A+  T N  +    E+ D+VDLFGS S+EE+ ++  V  R    +D+                 L+VKPWDDETDM  ++ N   I+ +G V  AH+L+
Sbjct:   78 FTTYGPEAVEVTQNPKDAPNAEEDDEVDLFGSESEEEDPEV--VAEREKRLADYKKKKEGKAKPAAKSIVTLDVKPWDDETDMDELVKNVVAIEMDGLVWGAHKLV 181
[Close]
BLAST of EMLSAG00000009406 vs. nr
Match: gi|662521111|gb|KEQ78530.1| (hypothetical protein M438DRAFT_360458 [Aureobasidium pullulans EXF-150])

HSP 1 Score: 56.225 bits (134), Expect = 5.358e-7
Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = 0 
Query:   14 TTNKIEEDGDDVDLFGSSSDEENTQ--------IKFVFTRSTSKSDFDCTDL--LEVKPWDDETDMSTILANCKTIQKEGSVLSAHELL 92
             T   EED DDVDLFGS  +EE+ +        +K    +   K+      +  +++KPWDDETDM  + A+ ++I+K+G V  A  L+
Sbjct:   95 ATENAEEDDDDVDLFGSDDEEEDAEHARVREERLKEYAAKKAGKTKPAAKSIVTMDIKPWDDETDMKELEAHVRSIEKDGLVWGASTLV 183
[Close]
BLAST of EMLSAG00000009406 vs. nr
Match: gi|915058604|ref|XP_013258710.1| (elongation factor 1-beta [Exophiala aquamarina CBS 119918] >gi|656910461|gb|KEF56120.1| elongation factor 1-beta [Exophiala aquamarina CBS 119918])

HSP 1 Score: 56.225 bits (134), Expect = 6.000e-7
Identity = 36/107 (33.64%), Postives = 54/107 (50.47%), Query Frame = 0 
Query:    3 YTTCKSVAIPPTTN-----KIEEDGDDVDLFGSSSDEENTQIKFVFTRSTSKSDFDCTD------------LLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELL 92
            +TT    A+  T N       EE+ D+VDLFGS  +EE+ ++  V  R    +D+                +L+VKPWDDETDM+ +  N   IQ++G     H+L+
Sbjct:   78 FTTYGPDALAVTQNPKDAPAAEEEDDEVDLFGSDDEEEDPEV--VAEREKRLADYKKKKEGKAKPAAKSIVILDVKPWDDETDMNQLTQNVLAIQQDGLTWGGHKLV 182
[Close]
BLAST of EMLSAG00000009406 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold275_size226830-snap-gene-0.30 (protein:Tk00627 transcript:maker-scaffold275_size226830-snap-gene-0.30-mRNA-1 annotation:"elongation factor 1-delta")

HSP 1 Score: 48.1358 bits (113), Expect = 9.371e-8
Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 0 
Query:   27 LFGSSSDEEN---------TQIKFVFTRSTSKSDF--DCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELL 92
            LFGS SDEE           ++K    + + K       + LL+VKPWDDETDM  +LA  KTI+K+G +  A +L+
Sbjct:  345 LFGSESDEEEDADKVRIREERLKAYHEKKSKKPTLIAKTSVLLDVKPWDDETDMDAMLAAVKTIKKDGLLWGASKLV 421
[Close]
BLAST of EMLSAG00000009406 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold29_size597861-snap-gene-4.40 (protein:Tk04652 transcript:maker-scaffold29_size597861-snap-gene-4.40-mRNA-1 annotation:"elongation factor 1 beta")

HSP 1 Score: 46.595 bits (109), Expect = 2.802e-7
Identity = 32/83 (38.55%), Postives = 45/83 (54.22%), Query Frame = 0 
Query:   20 EDGDDVDLFGSSSDEENT--------QIKFVFTRSTSKSDF--DCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELL 92
            ED DDVDLFGS  +EE+         ++K    + + K       + LL+VKPWDDETDM   L   K I+ +G V  A +++
Sbjct:  109 EDDDDVDLFGSDEEEEDAEKARVREERLKAYAEKKSKKPTIIAKTSVLLDVKPWDDETDMEAALKLVKAIEMDGLVWGASKMV 191
The following BLAST results are available for this feature:
BLAST of EMLSAG00000009406 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-3.019e-630.19symbol:AN1162 species:162425 "Aspergillus nidulans... [more]
-3.049e-632.69symbol:AO090038000287 species:5062 "Aspergillus or... [more]
-3.530e-636.47symbol:CPAR2_401960 species:5480 "Candida parapsil... [more]
-3.578e-636.26symbol:CAGL0F08547g "Strain CBS138 chromosome F co... [more]
-3.578e-636.26symbol:EFB1 species:5478 "Candida glabrata" [GO:00... [more]
-4.213e-632.73symbol:An08g03490 "Function: beta subunit of eukar... [more]
-4.213e-632.73symbol:ef1 species:5061 "Aspergillus niger" [GO:00... [more]
-1.625e-541.67symbol:EFB1 "Translation elongation factor 1 beta"... [more]
-2.040e-551.43symbol:EFB1 "Putative uncharacterized protein EFB1... [more]
-2.040e-551.43symbol:EFB1 species:5476 "Candida albicans" [GO:00... [more]

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BLAST of EMLSAG00000009406 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 6
Match NameE-valueIdentityDescription
gi|592788352|gb|GAXK01166216.1|6.600e-659.38TSA: Calanus finmarchicus comp280_c0_seq1 transcri... [more]
gi|592785792|gb|GAXK01168776.1|1.016e-342.86TSA: Calanus finmarchicus comp388_c1_seq1 transcri... [more]
gi|592891491|gb|GAXK01066884.1|4.650e-246.88TSA: Calanus finmarchicus comp4273_c1_seq1 transcr... [more]
gi|592883480|gb|GAXK01074895.1|5.531e+023.64TSA: Calanus finmarchicus comp275273_c1_seq4 trans... [more]
gi|592883482|gb|GAXK01074893.1|5.859e+023.64TSA: Calanus finmarchicus comp275273_c1_seq2 trans... [more]
gi|592883483|gb|GAXK01074892.1|6.825e+023.64TSA: Calanus finmarchicus comp275273_c1_seq1 trans... [more]
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BLAST of EMLSAG00000009406 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000094062.903e-89100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s5:1566822... [more]
EMLSAP000000008227.571e-2247.32pep:novel supercontig:LSalAtl2s:LSalAtl2s1136:9457... [more]
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BLAST of EMLSAG00000009406 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
gi|461993|sp|P32192.2|EF1D_ARTSA1.034e-833.64RecName: Full=Elongation factor 1-delta; Short=EF-... [more]
gi|119162|sp|P12262.3|EF1B_ARTSA1.803e-837.62RecName: Full=Elongation factor 1-beta; Short=EF-1... [more]
gi|232034|sp|P30151.3|EF1B_XENLA3.209e-736.08RecName: Full=Elongation factor 1-beta; Short=EF-1... [more]
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BLAST of EMLSAG00000009406 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000009406 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 9
Match NameE-valueIdentityDescription
gi|225712196|gb|ACO11944.1|1.474e-1948.18Elongation factor 1-delta [Lepeophtheirus salmonis... [more]
gi|225713238|gb|ACO12465.1|5.553e-1948.18Elongation factor 1-delta [Lepeophtheirus salmonis... [more]
gi|225713076|gb|ACO12384.1|1.914e-1847.32Nucleoside diphosphate kinase A 1 [Lepeophtheirus ... [more]
gi|1089704424|ref|XP_018687734.1|2.276e-836.11hypothetical protein AYL99_11468 [Fonsecaea erecta... [more]
gi|632989489|ref|XP_007883676.1|1.937e-737.50PREDICTED: SH3 domain-containing protein C23A1.17-... [more]
gi|628329732|ref|XP_007744145.1|2.283e-736.36elongation factor 1-beta [Cladophialophora psammop... [more]
gi|628264262|ref|XP_007726781.1|4.757e-734.91elongation factor 1-beta [Capronia coronata CBS 61... [more]
gi|662521111|gb|KEQ78530.1|5.358e-735.96hypothetical protein M438DRAFT_360458 [Aureobasidi... [more]
gi|915058604|ref|XP_013258710.1|6.000e-733.64elongation factor 1-beta [Exophiala aquamarina CBS... [more]
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BLAST of EMLSAG00000009406 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 2
Match NameE-valueIdentityDescription
maker-scaffold275_size226830-snap-gene-0.309.371e-840.26protein:Tk00627 transcript:maker-scaffold275_size2... [more]
maker-scaffold29_size597861-snap-gene-4.402.802e-738.55protein:Tk04652 transcript:maker-scaffold29_size59... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s5supercontigLSalAtl2s5:1566822..1570286 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap-LSalAtl2s5-processed-gene-15.31
Biotypeprotein_coding
EvidenceIEA
NoteElongation factor 1-delta [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000009406 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000009406EMLSAT00000009406-705253Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s5:1566822..1570286-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000009406-692172 ID=EMLSAG00000009406-692172|Name=EMLSAG00000009406|organism=Lepeophtheirus salmonis|type=gene|length=3465bp|location=Sequence derived from alignment at LSalAtl2s5:1566822..1570286- (Lepeophtheirus salmonis)
ATGAACTACACCACCTGTAAATCAGTAGCAATACCTCCCACCACCAACAA
AATAGAAGAGGATGGTGATGATGTTGATCTTTTTGGAAGCTCATCTGACG
AGGAAAATACCCAGATAAAGTTTGTGTTCACGAGGAGCACTTCAAGTCTT
ATCATAAGAAGAAATCCCAGAATCCGACTTTGATTGCACAGACCTCTTAG
AGGTTAAGCCGTGGGATGATGAAACTGATATGAGCACCATTCTTGCAAAT
TGCAAAACGATTCAAAAAGAGGGTTCTGTCTTGAGTGCACACGAATTGCT
ACGTAATTATGAAGCTTTAAGTCATGTCAGTTGTCGATGATCACACATAT
TCATCGATGAGTTGTGTGAGGAAATTGCCGAGTCTGAAGATTTTGTACAA
TTTGTAGGTATGGGTACCATGTCCAAAATCTAAATGTATTTTTAGAATTG
TTGAGGAAGTGCTCCGTTTGAAATAGAATTATATCTTTTTCTTTCTTTTT
ATGAGACAAGAATACTCAAATATCAAGAACATTATAGAAATACAAAGAAA
TAAAAATATCATAAAATACTATTTAAAAAAAGTTGGGTTTATAAAACGTT
ATTACATTTACCACGTGATTATAAAGATAGGTGGGCATTTAAAGAAAATA
ACCAGGTTAGTATAAATTTTTTTTAAGGAGATTTGTGATATTGTTCGTAG
GCCCAGTAGAAAATAAAACTTTTAATGTGATTTTTAGTATTTATTGCAGT
ATTGTAATGCATCAAAAAATGAGAATTATGTGAAGTTACATTGTCAATTT
CATCTTTATATATAAGTGTTGTCATAATATCAATAAATTCATACAGGCCC
CGCTACAAATCTTTGGCTCGGTTATTATTTGGCGAAACTTCAATATTTTT
TTCAGTAGCAGTCTTTATCGGCCTTTTAATGGTGTGTCCTCTAATCAGCA
CCCCCAATAACAAAACTGTGACCATGACACTATTTTAAGGGGCGTCTGCA
GCTTTAATTTTGTTTCGGAGCTCATTGATTTTCATACTTTTTTCCATCAA
TATAATTTTCGTTGAGGACTGGAGGGTGACTTTGATATTGGTAAAAACTG
ATTAAGTAATGGACTGCTTGAAATACGAAAATGCCCATGAACCACTACAG
TACCGCTATACTAAACATTACTATTATATATGTGACTGTCAACAGAAAAA
GAATGTAGAATGATTTTTCTCAAATATACAAAAGGAATACAATTCACAAC
GTTTCTAATGATAATCTTTATTGTATATTGTTGCTTTGTGTTAACAAAAT
TAGACTATTCGTATAAAGTTTAATCTGTGTCAATCTCAAAAAATTGATCA
AATATTAAATCACTGTATTTGGCAAACTCTACGTACTTCAAAAAACAGAT
TTGAGATGAGCACATTAAATCATTTAGAAAAATGCTATAAAATTCGTCAT
GAGAAAAAAAAGTTTATTTTTGTTGTAGCAGTTCTGGAAAATAAAAAGGC
CTGTTTATATGACCGCTTTCTAAAACATCTTGTTTTATACAGAAGATTAG
TTTTGAGTAAGATAACCAACAGTTATCCTAGTTGGATTTAGAAGAAAAAA
CACAATCTTTTCAGTATACAAAAAATCTTCTAGGGAGTCATTTCAATTGC
AACTGATGTAATAATCTCTCACTTTTTCTTCAATATTCTTCCAGTTTGGC
CTTCATGTTTTACACMCCACGGCCAATGACTCTTTCTAATTTTGCAGTCC
CATTCTTGTTAAACTGTTTTTCATTTTCTTGATTTTGTTTCAAGATTGTT
CGTATGTTGATGATGTACTGAAAATATATTTACCCAAAAATAATTCTTAG
TTGGTGCAACACAATATTTTACTCTTCAAGACTAAGTAAATCACTTTGAT
AGAAAATACATACATACATAGATTTCAAATATCTGCTTTCACGAGGTTTT
CATACTGATAAATTGTTATTATTATTATTACATTTGTATTTATTCATTTT
GTCGCATTGAAGAAGTTATATGTATGCATATATAGTCATAGATTTGTAAA
GTGGATAAGAGCAAATTTTATATGTGTACAACATTGGTATTGTTGGATTT
TATTTATTTATAGTTATCTGCAATAAATTNNATACTGATAAATTGTTATT
ATTATTATTACATTTGTATTTATTCATTTTGTCGCATTGAAGAAGTTATA
TGTATGCATATATAGTCATAGATTTGTAAAGTGGATAAGAGCAAATTTTA
TATGTGTACAACATTGGTATTGTTGGATTTTATTTATTTATAGTTATCTG
CAATAAATTTGAAAGTGAATGAATTTTAATGTCTTGGATTTGAGAGTAAA
ATATTTACATCTAATTAGTAATTATACTGGGGTGTTGGGAAGTGTTGTTA
TATTTCAGGTCTAAGCAGAGTTGGGACCCAATGTTCGTATTAGCATTTAA
TTACTATTGTTGATTACAAACTTCATTTTTCAACCAAAGGACAGCTGAAA
CCTAAATAATCAATTTTTTTTATCCTATGTATATAAGTGTAAGAATGTCT
GAGTAACAAAAAAAGGTAACGAGTGTGCAGTCCTCTGCGCCGATGTCAGT
GCTGAGAAGACTTTAGAGACAGTTGCCCTCTCTATCTGGACTGCCTTCAA
CATCAGTAAGTCCATTCATGAGTGCCCCCTCCCATACAACCAAGAAGAAT
AAAAAATTATTCAGTAACAATATGACTGACTTCTGGCCTGCCTCCATGTG
GCACTGCTCCAGCCCTGACCTGAACCCCCTTGAAGTTTAGGCCGTCTTGG
TGAAGAATGTCTGCCGAACCTCCAAATTTGGATTTGGGTCCAGGAAGCCA
TCATGGAACGCAATGAAAACGGTCTCCATTGCCAAGAGTTGCCAATCTAT
TCGCCGGCGTGTCGATGCTATTATTGCTTTGATAGGACACATTGAATAAA
CAATATAGCTAAATGTAGCATTTAAACATATCACAAATTGGTTTGGAGTT
GTTTTTTTTTACTTCATAAAAATGACATTTTTTGTAATTAAGTCATGATA
CTGCAATTTTCTGGACTCTAATCTATAATTACTCTGTACGATATTTAAAC
TTAAAGCAACAAATATTTAAAATAAAATAGATTAATAACTTTAAGGAGGT
TTTGTTCTTGATGAAGTTTCGTGATAATGACATACATGCATTTCTGTCAT
TTATGAGTACACACACTCATTGTTATACTTTATACATAGATTTTCTTCCA
GTTGGCAATCAAATGAGGGTTTGTTTATTTTAAATTTTCTAAATCTGTTA
TCATTATTATTTAATTCTTGAAGAGAGAACATCCTACATATATATGTTTA
GTAATCACTAGTGCGTGAAAGACGAAGATTAACACTGAGGATTTGTTGCG
AAGCTATAAGTGAGAGTCCTGGTTGTACTCGTAGTAGAATTGAGGATCGA
CATCAGAGTGATTGA
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