EMLSAG00000009644, EMLSAG00000009644-692410 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000009644
Unique NameEMLSAG00000009644-692410
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000009644 vs. GO
Match: - (symbol:TfIIA-S "Transcription-factor-IIA-S" species:7227 "Drosophila melanogaster" [GO:0005672 "transcription factor TFIIA complex" evidence=ISS;IDA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA] [GO:0001129 "TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly" evidence=IPI] [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0001128 "RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly" evidence=IPI] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=ISS] [GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=NAS] [GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224 EMBL:AE014297 GO:GO:0022008 GO:GO:0045944 GO:GO:0001129 eggNOG:COG5123 KO:K03123 OMA:WTFIVKN GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF47396 SUPFAM:SSF50784 GeneTree:ENSGT00390000014572 EMBL:X83271 EMBL:AY113478 EMBL:BT044069 PIR:A54883 RefSeq:NP_524467.1 UniGene:Dm.20591 ProteinModelPortal:P52656 SMR:P52656 BioGrid:67758 DIP:DIP-23236N IntAct:P52656 MINT:MINT-982942 PaxDb:P52656 PRIDE:P52656 EnsemblMetazoa:FBtr0084526 GeneID:42822 KEGG:dme:Dmel_CG5163 UCSC:CG5163-RA CTD:42822 FlyBase:FBgn0013347 InParanoid:P52656 OrthoDB:EOG7RFTKP PhylomeDB:P52656 GenomeRNAi:42822 NextBio:830743 PRO:PR:P52656 Bgee:P52656 Uniprot:P52656)

HSP 1 Score: 96.2857 bits (238), Expect = 2.230e-25
Identity = 53/104 (50.96%), Postives = 62/104 (59.62%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKSA 70
            M+YQLYRNTTLG+TLQE+LDEL+Q   ++P LA KVLLQFD+SINNALN+                                REV E  KVD+VKIVACD KS 
Sbjct:    1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKSG 104
[Close]
BLAST of EMLSAG00000009644 vs. GO
Match: - (symbol:GTF2A2 "Transcription initiation factor IIA subunit 2" species:9031 "Gallus gallus" [GO:0001103 "RNA polymerase II repressing transcription factor binding" evidence=IEA] [GO:0003713 "transcription coactivator activity" evidence=IEA] [GO:0005672 "transcription factor TFIIA complex" evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein heterodimerization activity" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0051123 "RNA polymerase II transcriptional preinitiation complex assembly" evidence=IEA] InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224 GO:GO:0045944 GO:GO:0003713 GO:GO:0051091 GO:GO:0051123 eggNOG:COG5123 KO:K03123 GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF47396 SUPFAM:SSF50784 GeneTree:ENSGT00390000014572 OrthoDB:EOG7RFTKP CTD:2958 HOVERGEN:HBG000826 TreeFam:TF315131 EMBL:AADN03005930 EMBL:AB264606 RefSeq:NP_001075177.1 UniGene:Gga.5355 ProteinModelPortal:A1IIE5 SMR:A1IIE5 STRING:9031.ENSGALP00000006007 Ensembl:ENSGALT00000006017 GeneID:770910 KEGG:gga:770910 InParanoid:A1IIE5 NextBio:20921116 PRO:PR:A1IIE5 ArrayExpress:A1IIE5 Uniprot:A1IIE5)

HSP 1 Score: 87.8113 bits (216), Expect = 4.825e-22
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALNK-------------------------------REVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+  Q ++P LAL+VLLQFD++IN+AL +                               REV+E  KVD+VKIVACD K+
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGKN 102
[Close]
BLAST of EMLSAG00000009644 vs. GO
Match: - (symbol:Gtf2a2 "Transcription initiation factor IIA subunit 2" species:10116 "Rattus norvegicus" [GO:0001103 "RNA polymerase II repressing transcription factor binding" evidence=IEA] [GO:0003713 "transcription coactivator activity" evidence=IEA] [GO:0005672 "transcription factor TFIIA complex" evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein heterodimerization activity" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0051123 "RNA polymerase II transcriptional preinitiation complex assembly" evidence=IEA] InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224 RGD:620720 GO:GO:0045944 GO:GO:0003713 GO:GO:0051091 GO:GO:0051123 eggNOG:COG5123 HOGENOM:HOG000167251 KO:K03123 OMA:WTFIVKN GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF47396 SUPFAM:SSF50784 GeneTree:ENSGT00390000014572 OrthoDB:EOG7RFTKP CTD:2958 HOVERGEN:HBG000826 TreeFam:TF315131 EMBL:AF000944 RefSeq:NP_445797.1 RefSeq:XP_006243442.1 RefSeq:XP_006243443.1 UniGene:Rn.4053 ProteinModelPortal:O08950 SMR:O08950 PRIDE:O08950 Ensembl:ENSRNOT00000014706 GeneID:83828 KEGG:rno:100365822 KEGG:rno:83828 UCSC:RGD:620720 InParanoid:O08950 NextBio:616460 PRO:PR:O08950 Genevestigator:O08950 Uniprot:O08950)

HSP 1 Score: 87.4261 bits (215), Expect = 7.013e-22
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALNK-------------------------------REVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+  Q ++P LAL+VLLQFD++IN+AL +                               REV+E  KVD+VKIVACD K+
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
[Close]
BLAST of EMLSAG00000009644 vs. GO
Match: - (symbol:Gtf2a2 "general transcription factor IIA, 2" species:10116 "Rattus norvegicus" [GO:0001103 "RNA polymerase II repressing transcription factor binding" evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005672 "transcription factor TFIIA complex" evidence=IEA;ISO] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISO] [GO:0008134 "transcription factor binding" evidence=ISO] [GO:0017025 "TBP-class protein binding" evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=ISO] [GO:0042803 "protein homodimerization activity" evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO] [GO:0051123 "RNA polymerase II transcriptional preinitiation complex assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224 RGD:620720 GO:GO:0045944 GO:GO:0003713 GO:GO:0051091 GO:GO:0051123 eggNOG:COG5123 HOGENOM:HOG000167251 KO:K03123 OMA:WTFIVKN GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF47396 SUPFAM:SSF50784 GeneTree:ENSGT00390000014572 OrthoDB:EOG7RFTKP CTD:2958 HOVERGEN:HBG000826 TreeFam:TF315131 EMBL:AF000944 RefSeq:NP_445797.1 RefSeq:XP_006243442.1 RefSeq:XP_006243443.1 UniGene:Rn.4053 ProteinModelPortal:O08950 SMR:O08950 PRIDE:O08950 Ensembl:ENSRNOT00000014706 GeneID:83828 KEGG:rno:100365822 KEGG:rno:83828 UCSC:RGD:620720 InParanoid:O08950 NextBio:616460 PRO:PR:O08950 Genevestigator:O08950 Uniprot:O08950)

HSP 1 Score: 87.4261 bits (215), Expect = 7.013e-22
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALNK-------------------------------REVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+  Q ++P LAL+VLLQFD++IN+AL +                               REV+E  KVD+VKIVACD K+
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
[Close]
BLAST of EMLSAG00000009644 vs. GO
Match: - (symbol:Gtf2a2 "general transcription factor II A, 2" species:10090 "Mus musculus" [GO:0001103 "RNA polymerase II repressing transcription factor binding" evidence=IPI] [GO:0003713 "transcription coactivator activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005672 "transcription factor TFIIA complex" evidence=ISO] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISO] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=IEA] [GO:0008134 "transcription factor binding" evidence=ISO] [GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0030054 "cell junction" evidence=ISO] [GO:0042803 "protein homodimerization activity" evidence=ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO] [GO:0046982 "protein heterodimerization activity" evidence=ISO] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=ISO] [GO:0051123 "RNA polymerase II transcriptional preinitiation complex assembly" evidence=ISO] InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224 MGI:MGI:1933289 GO:GO:0045944 GO:GO:0003713 GO:GO:0051091 GO:GO:0051123 eggNOG:COG5123 HOGENOM:HOG000167251 KO:K03123 OMA:WTFIVKN GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF47396 SUPFAM:SSF50784 GeneTree:ENSGT00390000014572 OrthoDB:EOG7RFTKP CTD:2958 HOVERGEN:HBG000826 TreeFam:TF315131 EMBL:BC048705 RefSeq:NP_001034608.1 RefSeq:NP_001269012.1 RefSeq:XP_006511179.1 UniGene:Mm.293117 ProteinModelPortal:Q80ZM7 SMR:Q80ZM7 PhosphoSite:Q80ZM7 PaxDb:Q80ZM7 PRIDE:Q80ZM7 Ensembl:ENSMUST00000118198 Ensembl:ENSMUST00000119413 GeneID:235459 KEGG:mmu:235459 UCSC:uc009qnr.1 NextBio:382690 PRO:PR:Q80ZM7 ArrayExpress:Q80ZM7 Bgee:Q80ZM7 CleanEx:MM_GTF2A2 Genevestigator:Q80ZM7 Uniprot:Q80ZM7)

HSP 1 Score: 87.4261 bits (215), Expect = 7.013e-22
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALNK-------------------------------REVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+  Q ++P LAL+VLLQFD++IN+AL +                               REV+E  KVD+VKIVACD K+
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
[Close]
BLAST of EMLSAG00000009644 vs. GO
Match: - (symbol:GTF2A2 "Transcription initiation factor IIA subunit 2" species:9823 "Sus scrofa" [GO:0001103 "RNA polymerase II repressing transcription factor binding" evidence=IEA] [GO:0003713 "transcription coactivator activity" evidence=IEA] [GO:0005672 "transcription factor TFIIA complex" evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein heterodimerization activity" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0051123 "RNA polymerase II transcriptional preinitiation complex assembly" evidence=IEA] InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224 GO:GO:0045944 GO:GO:0003713 GO:GO:0051091 GO:GO:0051123 KO:K03123 OMA:WTFIVKN GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF47396 SUPFAM:SSF50784 GeneTree:ENSGT00390000014572 OrthoDB:EOG7RFTKP CTD:2958 TreeFam:TF315131 EMBL:CU914311 RefSeq:XP_003121518.1 RefSeq:XP_003121520.1 ProteinModelPortal:F2Z4Z2 SMR:F2Z4Z2 Ensembl:ENSSSCT00000005062 GeneID:100521701 KEGG:ssc:100521701 Uniprot:F2Z4Z2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.013e-22
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALNK-------------------------------REVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+  Q ++P LAL+VLLQFD++IN+AL +                               REV+E  KVD+VKIVACD K+
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
[Close]
BLAST of EMLSAG00000009644 vs. GO
Match: - (symbol:GTF2A2 "Transcription initiation factor IIA subunit 2" species:9615 "Canis lupus familiaris" [GO:0001103 "RNA polymerase II repressing transcription factor binding" evidence=IEA] [GO:0003713 "transcription coactivator activity" evidence=IEA] [GO:0005672 "transcription factor TFIIA complex" evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein heterodimerization activity" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0051123 "RNA polymerase II transcriptional preinitiation complex assembly" evidence=IEA] InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224 GO:GO:0045944 GO:GO:0003713 GO:GO:0051091 GO:GO:0051123 KO:K03123 OMA:WTFIVKN GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF47396 SUPFAM:SSF50784 GeneTree:ENSGT00390000014572 OrthoDB:EOG7RFTKP CTD:2958 TreeFam:TF315131 EMBL:AAEX03016180 RefSeq:XP_005638527.1 RefSeq:XP_005638528.1 RefSeq:XP_535502.1 RefSeq:XP_864467.2 ProteinModelPortal:E2R3G8 SMR:E2R3G8 Ensembl:ENSCAFT00000026391 GeneID:478327 KEGG:cfa:478327 NextBio:20853678 Uniprot:E2R3G8)

HSP 1 Score: 87.4261 bits (215), Expect = 7.013e-22
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALNK-------------------------------REVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+  Q ++P LAL+VLLQFD++IN+AL +                               REV+E  KVD+VKIVACD K+
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
[Close]
BLAST of EMLSAG00000009644 vs. GO
Match: - (symbol:GTF2A2 "Transcription initiation factor IIA subunit 2" species:9606 "Homo sapiens" [GO:0001103 "RNA polymerase II repressing transcription factor binding" evidence=IEA] [GO:0003713 "transcription coactivator activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005672 "transcription factor TFIIA complex" evidence=IDA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=IDA;TAS] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=TAS] [GO:0006368 "transcription elongation from RNA polymerase II promoter" evidence=TAS] [GO:0008134 "transcription factor binding" evidence=IPI] [GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral process" evidence=TAS] [GO:0017025 "TBP-class protein binding" evidence=IPI] [GO:0030054 "cell junction" evidence=IDA] [GO:0042803 "protein homodimerization activity" evidence=IPI] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA] [GO:0046982 "protein heterodimerization activity" evidence=IPI] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IDA] [GO:0051123 "RNA polymerase II transcriptional preinitiation complex assembly" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224 Reactome:REACT_116125 GO:GO:0016032 GO:GO:0045944 GO:GO:0003713 GO:GO:0051091 GO:GO:0006368 EMBL:CH471082 Reactome:REACT_1788 EMBL:AC092755 GO:GO:0051123 eggNOG:COG5123 HOGENOM:HOG000167251 KO:K03123 OMA:WTFIVKN GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF47396 SUPFAM:SSF50784 OrthoDB:EOG7RFTKP EMBL:X81713 EMBL:U14193 EMBL:U21242 EMBL:BT007362 EMBL:CR542192 EMBL:BC000287 EMBL:BC001919 PIR:I38952 RefSeq:NP_004483.1 RefSeq:XP_005254381.1 RefSeq:XP_005254382.1 UniGene:Hs.512934 PDB:1NVP PDBsum:1NVP ProteinModelPortal:P52657 SMR:P52657 BioGrid:109213 IntAct:P52657 STRING:9606.ENSP00000379372 BindingDB:P52657 PhosphoSite:P52657 DMDM:1729806 PaxDb:P52657 PRIDE:P52657 DNASU:2958 Ensembl:ENST00000396060 Ensembl:ENST00000396061 Ensembl:ENST00000396063 GeneID:2958 KEGG:hsa:2958 UCSC:uc002agg.3 CTD:2958 GeneCards:GC15M059930 HGNC:HGNC:4647 HPA:HPA056239 MIM:600519 neXtProt:NX_P52657 PharmGKB:PA29034 HOVERGEN:HBG000826 InParanoid:P52657 PhylomeDB:P52657 TreeFam:TF315131 EvolutionaryTrace:P52657 GenomeRNAi:2958 NextBio:11726 PRO:PR:P52657 ArrayExpress:P52657 Bgee:P52657 CleanEx:HS_GTF2A2 Genevestigator:P52657 Uniprot:P52657)

HSP 1 Score: 86.2705 bits (212), Expect = 1.795e-21
Identity = 49/102 (48.04%), Postives = 62/102 (60.78%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALNK-------------------------------REVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+  Q ++P LAL+VLLQFD++IN AL +                               REV+E  KVD+VKIVACD K+
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
[Close]
BLAST of EMLSAG00000009644 vs. GO
Match: - (symbol:GTF2A2 "Transcription initiation factor IIA subunit 2" species:9913 "Bos taurus" [GO:0001103 "RNA polymerase II repressing transcription factor binding" evidence=IEA] [GO:0003713 "transcription coactivator activity" evidence=IEA] [GO:0005672 "transcription factor TFIIA complex" evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein heterodimerization activity" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0051123 "RNA polymerase II transcriptional preinitiation complex assembly" evidence=IEA] InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224 GO:GO:0045944 GO:GO:0003713 GO:GO:0051091 GO:GO:0051123 eggNOG:COG5123 HOGENOM:HOG000167251 KO:K03123 OMA:WTFIVKN GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF47396 SUPFAM:SSF50784 GeneTree:ENSGT00390000014572 OrthoDB:EOG7RFTKP CTD:2958 HOVERGEN:HBG000826 TreeFam:TF315131 EMBL:DAAA02028802 EMBL:BC109831 RefSeq:NP_001032708.1 UniGene:Bt.29289 SMR:Q32L01 STRING:9913.ENSBTAP00000013602 Ensembl:ENSBTAT00000013602 GeneID:613479 KEGG:bta:613479 InParanoid:Q32L01 NextBio:20898597 Uniprot:Q32L01)

HSP 1 Score: 86.2705 bits (212), Expect = 1.795e-21
Identity = 49/102 (48.04%), Postives = 62/102 (60.78%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALNK-------------------------------REVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+  Q ++P LAL+VLLQFD++IN AL +                               REV+E  KVD+VKIVACD K+
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
[Close]
BLAST of EMLSAG00000009644 vs. GO
Match: - (symbol:gtf2a2 "general transcription factor IIA, 2" species:7955 "Danio rerio" [GO:0005672 "transcription factor TFIIA complex" evidence=IEA] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224 ZFIN:ZDB-GENE-050522-513 GO:GO:0006355 GO:GO:0006367 eggNOG:COG5123 HOGENOM:HOG000167251 KO:K03123 OMA:WTFIVKN GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF47396 SUPFAM:SSF50784 GeneTree:ENSGT00390000014572 OrthoDB:EOG7RFTKP CTD:2958 HOVERGEN:HBG000826 TreeFam:TF315131 EMBL:CR450827 EMBL:BC095322 EMBL:BC165482 RefSeq:NP_001018441.1 UniGene:Dr.78839 STRING:7955.ENSDARP00000070238 Ensembl:ENSDART00000075757 GeneID:798997 KEGG:dre:798997 InParanoid:Q503H9 NextBio:20933639 PRO:PR:Q503H9 Uniprot:Q503H9)

HSP 1 Score: 85.1149 bits (209), Expect = 4.688e-21
Identity = 48/102 (47.06%), Postives = 61/102 (59.80%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALNK-------------------------------REVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+  Q ++P LAL+VLLQFD++IN AL                                 REV++  KVD+VKIVACD K+
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKN 102
[Close]
BLAST of EMLSAG00000009644 vs. C. finmarchicus
Match: gi|592784924|gb|GAXK01169644.1| (TSA: Calanus finmarchicus comp26_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 108.612 bits (270), Expect = 1.429e-28
Identity = 61/106 (57.55%), Postives = 68/106 (64.15%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKSALP 72
            M+YQLYRNTTLGHTLQE+LDELM  QMLSPALAL+VL+QFD+SINNAL                                  RE SE AKVDRVKIVACDAKS++P
Sbjct:  338 MSYQLYRNTTLGHTLQESLDELMQLQMLSPALALRVLIQFDKSINNALATRVKTKLHFKAEKLNTYRFCDNVWTFMLKEVEFRENSELAKVDRVKIVACDAKSSVP 655
[Close]
BLAST of EMLSAG00000009644 vs. C. finmarchicus
Match: gi|592832708|gb|GAXK01124836.1| (TSA: Calanus finmarchicus comp25313_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 9.461e-5
Identity = 35/105 (33.33%), Postives = 47/105 (44.76%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDEL--MQMLSPALALKVLLQFDRSINNALNKREVS--------------------------EF--------AKVD-RVKIVACDAK 68
            MAY LYR T LG  LQE L EL   + +SP++   VL +FD ++ + L     S                          EF        A+V+ +VKIVACDA+
Sbjct:   18 MAYALYRGTRLGLALQEALGELEEYEQISPSVKSAVLRKFDETMCDKLENEVESRLTIRAERLWSFRFCDSVWQLLLKNVEFLSNTGHLVARVEGKVKIVACDAR 332
[Close]
BLAST of EMLSAG00000009644 vs. L. salmonis peptides
Match: EMLSAP00000009644 (pep:novel supercontig:LSalAtl2s:LSalAtl2s61:239549:239882:-1 gene:EMLSAG00000009644 transcript:EMLSAT00000009644 description:"snap_masked-LSalAtl2s61-processed-gene-2.20")

HSP 1 Score: 171.014 bits (432), Expect = 2.172e-56
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQMLSPALALKVLLQFDRSINNALNKREVSEFAKVDRVKIVACDAKSALPIVSTTKSYLND 83
            MAYQLYRNTTLGHTLQETLDELMQMLSPALALKVLLQFDRSINNALNKREVSEFAKVDRVKIVACDAKSALPIVSTTKSYLND
Sbjct:    1 MAYQLYRNTTLGHTLQETLDELMQMLSPALALKVLLQFDRSINNALNKREVSEFAKVDRVKIVACDAKSALPIVSTTKSYLND 83
[Close]
BLAST of EMLSAG00000009644 vs. L. salmonis peptides
Match: EMLSAP00000000101 (pep:novel supercontig:LSalAtl2s:LSalAtl2s101:131115:131450:-1 gene:EMLSAG00000000101 transcript:EMLSAT00000000101 description:"augustus_masked-LSalAtl2s101-processed-gene-1.1")

HSP 1 Score: 123.25 bits (308), Expect = 2.062e-37
Identity = 70/107 (65.42%), Postives = 71/107 (66.36%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDEL--MQMLSPALALKVLLQFDRSINNALNKR--------------------------------EVSEFAKVDRVKIVACDAKSALPI 73
            M+YQLYRNTTLGHTLQETLDEL  MQMLSPALALKVLLQFDRSINNALN R                                EVSE AKVDRVKIVACDAKSALPI
Sbjct:    1 MSYQLYRNTTLGHTLQETLDELMQMQMLSPALALKVLLQFDRSINNALNTRVKTRLNFKAEKLNTYRFCDNVWTFMLNEVEFKEVSELAKVDRVKIVACDAKSALPI 107
[Close]
BLAST of EMLSAG00000009644 vs. SwissProt
Match: gi|1711664|sp|P52656.1|T2AG_DROME (RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=TFIIA p14 subunit; Short=TFIIA-14; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma; AltName: Full=dTFIIA-S)

HSP 1 Score: 96.2857 bits (238), Expect = 1.398e-26
Identity = 53/104 (50.96%), Postives = 62/104 (59.62%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKSA 70
            M+YQLYRNTTLG+TLQE+LDEL+Q   ++P LA KVLLQFD+SINNALN+                                REV E  KVD+VKIVACD KS 
Sbjct:    1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKSG 104
[Close]
BLAST of EMLSAG00000009644 vs. SwissProt
Match: gi|2811071|sp|O08950.1|T2AG_RAT (RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma >gi|47117190|sp|Q80ZM7.2|T2AG_MOUSE RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma)

HSP 1 Score: 87.4261 bits (215), Expect = 5.242e-23
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALNK-------------------------------REVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+  Q ++P LAL+VLLQFD++IN+AL +                               REV+E  KVD+VKIVACD K+
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
[Close]
BLAST of EMLSAG00000009644 vs. SwissProt
Match: gi|327488497|sp|B7Q1Q9.1|T2AG_IXOSC (RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma)

HSP 1 Score: 87.0409 bits (214), Expect = 7.789e-23
Identity = 50/102 (49.02%), Postives = 59/102 (57.84%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAK 68
            M+YQLYRNTTLG+TLQE+LDEL+Q   ++P LALKVLLQFD++INNAL                                  REV E  K D+VKIVACD K
Sbjct:    1 MSYQLYRNTTLGNTLQESLDELIQCGQITPHLALKVLLQFDKAINNALANRVKTRLTFKAGHLSTYRFCDNVWTFVLKDVEFREVQELVKADKVKIVACDGK 102
[Close]
BLAST of EMLSAG00000009644 vs. SwissProt
Match: gi|20140818|sp|Q9IA78.1|T2AG_PAROL (RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma)

HSP 1 Score: 86.6557 bits (213), Expect = 9.452e-23
Identity = 50/102 (49.02%), Postives = 63/102 (61.76%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNAL-----NK--------------------------REVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+  Q ++P LAL+VLLQFD++IN AL     N+                          REV++  KVD+VKIVACD KS
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALASRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKS 102
[Close]
BLAST of EMLSAG00000009644 vs. SwissProt
Match: gi|1729806|sp|P52657.1|T2AG_HUMAN (RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=TFIIA p12 subunit; Short=TFIIA-12; Short=TFIIAS; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma)

HSP 1 Score: 86.2705 bits (212), Expect = 1.371e-22
Identity = 49/102 (48.04%), Postives = 62/102 (60.78%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALNK-------------------------------REVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+  Q ++P LAL+VLLQFD++IN AL +                               REV+E  KVD+VKIVACD K+
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
[Close]
BLAST of EMLSAG00000009644 vs. SwissProt
Match: gi|20140636|sp|Q90YG6.1|T2AG_ONCMY (RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma)

HSP 1 Score: 85.1149 bits (209), Expect = 3.606e-22
Identity = 48/102 (47.06%), Postives = 61/102 (59.80%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNKR-------------------------------EVSEFAKVDRVKIVACDAKS 69
            MAYQLYRNTTLG++LQE+LDEL+Q   ++P LAL+VLLQFD++IN AL  R                               EV++  KVD+VKIVACD K+
Sbjct:    1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFKGSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKN 102
[Close]
BLAST of EMLSAG00000009644 vs. SwissProt
Match: gi|74853880|sp|Q54ND1.1|T2AG_DICDI (RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma)

HSP 1 Score: 61.6178 bits (148), Expect = 7.308e-13
Identity = 38/99 (38.38%), Postives = 51/99 (51.52%), Query Frame = 0 
Query:    3 YQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNALN--------------------------------KREVSEFAKVDRVKIVACDA 67
            Y+LYR +T+G  L +TL+EL+  Q +S +L  K+L QFD++IN AL+                                K E +E  KVDRVKIVACDA
Sbjct:    8 YELYRKSTIGEALTDTLEELLINQYISNSLYQKILTQFDKTINEALSNTVKAKTTFKGSLHTYRFCDSVWTFILENAQFKTEANEIVKVDRVKIVACDA 106
[Close]
BLAST of EMLSAG00000009644 vs. SwissProt
Match: gi|20140870|sp|Q9NEX2.2|T2AG_CAEEL (RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma)

HSP 1 Score: 60.077 bits (144), Expect = 3.217e-12
Identity = 39/105 (37.14%), Postives = 52/105 (49.52%), Query Frame = 0 
Query:    3 YQLYRNTTLGHTLQETLDELM--QMLSPALALKVLLQFDRSINNAL-----NK---------------------------REVSEFAKVDRVKIVACDAKSALPI 73
            YQLYRNTTLG  LQ+TLD+ +  QM+  +L+ K++  FD+SIN  L     NK                           R+  E   VDR+KIVACD ++   I
Sbjct:    6 YQLYRNTTLGQALQKTLDDFVGDQMIPDSLSKKIMDSFDKSINKILPHKAKNKVNFRADKLRAYRYCDNVWTFIVEQIDLRDAVEGGTVDRLKIVACDGQTKGQI 110
[Close]
BLAST of EMLSAG00000009644 vs. SwissProt
Match: gi|20141796|sp|Q39236.2|T2AG_ARATH (RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma)

HSP 1 Score: 56.9954 bits (136), Expect = 3.579e-11
Identity = 39/99 (39.39%), Postives = 52/99 (52.53%), Query Frame = 0 
Query:    3 YQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALN---KREVS--------EFA--------------------KVDRVKIVACDAK 68
            ++LYR +T+G  L ETLDE++Q   LSP LA++VL+QFD+S+  AL    K +VS         F                      V RVKIVACD+K
Sbjct:    4 FELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIKGHLHTYRFCDNVWTFILQDAMFKSDDRQENVSRVKIVACDSK 102
[Close]
BLAST of EMLSAG00000009644 vs. SwissProt
Match: gi|122169632|sp|Q0DLD3.1|T2AG_ORYSJ (RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma >gi|158513184|sp|A2XZI2.2|T2AG_ORYSI RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma)

HSP 1 Score: 55.0694 bits (131), Expect = 1.917e-10
Identity = 34/99 (34.34%), Postives = 51/99 (51.52%), Query Frame = 0 
Query:    3 YQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNKREVSEFA-------------------------------KVDRVKIVACDAK 68
            ++LYR +T+G  L ETLDE++    LSP LA++VL+QFD+S+  AL  +  S+ +                               +V +VKIVACD+K
Sbjct:    4 FELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIKGHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSK 102
[Close]
BLAST of EMLSAG00000009644 vs. Select Arthropod Genomes
Match: AAF56199.1 (Transcription-factor-IIA-S [Drosophila melanogaster])

HSP 1 Score: 96.2857 bits (238), Expect = 6.776e-27
Identity = 53/104 (50.96%), Postives = 62/104 (59.62%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKSA 70
            M+YQLYRNTTLG+TLQE+LDEL+Q   ++P LA KVLLQFD+SINNALN+                                REV E  KVD+VKIVACD KS 
Sbjct:    1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKSG 104
[Close]
BLAST of EMLSAG00000009644 vs. Select Arthropod Genomes
Match: EAA09250.4 (AGAP004370-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 88.1965 bits (217), Expect = 1.431e-23
Identity = 49/103 (47.57%), Postives = 62/103 (60.19%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKS 69
            M YQLYRNTTLG+TLQE+LDEL+Q   ++P LA++VL+QFD+SIN AL+                                 REV EFA+VD+VKIVACD K+
Sbjct:    1 MTYQLYRNTTLGNTLQESLDELIQYGQITPQLAVRVLVQFDKSINAALSNRVKSRVTFKAAKLNTYRFCDNVWTLMLNDVEFREVHEFARVDKVKIVACDGKN 103
[Close]
BLAST of EMLSAG00000009644 vs. Select Arthropod Genomes
Match: gb|EEC12781.1| (transcription initiation factor IIA gamma chain, putative [Ixodes scapularis])

HSP 1 Score: 87.0409 bits (214), Expect = 3.775e-23
Identity = 50/102 (49.02%), Postives = 59/102 (57.84%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAK 68
            M+YQLYRNTTLG+TLQE+LDEL+Q   ++P LALKVLLQFD++INNAL                                  REV E  K D+VKIVACD K
Sbjct:    1 MSYQLYRNTTLGNTLQESLDELIQCGQITPHLALKVLLQFDKAINNALANRVKTRLTFKAGHLSTYRFCDNVWTFVLKDVEFREVQELVKADKVKIVACDGK 102
[Close]
BLAST of EMLSAG00000009644 vs. Select Arthropod Genomes
Match: EEB17916.1 (transcription initiation factor IIA gamma chain, putative [Pediculus humanus corporis])

HSP 1 Score: 86.6557 bits (213), Expect = 4.219e-23
Identity = 48/103 (46.60%), Postives = 61/103 (59.22%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQM--LSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKS 69
            M+YQLYRNTTLG TLQE+LD+L+Q   ++P L +KVLLQFD+SINNAL+                                 REV E AKVD+VK+VACD ++
Sbjct:    1 MSYQLYRNTTLGTTLQESLDDLIQYGHITPQLGMKVLLQFDKSINNALSTRVKSKLTFRAGKLNTYRFCDNVWTFFLTDVEFREVQEIAKVDKVKVVACDGRN 103
[Close]
BLAST of EMLSAG00000009644 vs. Select Arthropod Genomes
Match: gb|EFA06253.1| (Transcription initiation factor IIA subunit 2-like Protein [Tribolium castaneum])

HSP 1 Score: 86.6557 bits (213), Expect = 4.970e-23
Identity = 50/104 (48.08%), Postives = 58/104 (55.77%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSIN--------------------------------NALNKREVSEFAKVDRVKIVACDAKSA 70
            M+YQLYRNTTLGHTLQE+LDEL+Q   ++P LA KVLL FD+SIN                                N +  REV E  KVD+VKIVACD KS 
Sbjct:    1 MSYQLYRNTTLGHTLQESLDELIQYGQITPQLACKVLLLFDKSINMTLATRVKSRLTFKAGKLNTYRFCDNVWTFMLNDVEFREVQEITKVDKVKIVACDGKSV 104
[Close]
BLAST of EMLSAG00000009644 vs. Select Arthropod Genomes
Match: EFX87528.1 (hypothetical protein DAPPUDRAFT_230366 [Daphnia pulex])

HSP 1 Score: 85.8853 bits (211), Expect = 1.092e-22
Identity = 49/106 (46.23%), Postives = 61/106 (57.55%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQM--LSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKSALP 72
            MAYQLYRNTTLG+TLQETLDEL+Q   ++P LALKVL+ FDR++NN+L +                                R+VSE  K + VKIVACD K+  P
Sbjct:    1 MAYQLYRNTTLGNTLQETLDELIQFGQITPQLALKVLVHFDRTMNNSLAQKVKNRLTFKAGKLNTYRFCDNVWTFLLSDVEFRDVSELCKGETVKIVACDGKAVPP 106
[Close]
BLAST of EMLSAG00000009644 vs. Select Arthropod Genomes
Match: XP_623063.1 (PREDICTED: transcription initiation factor IIA subunit 2 [Apis mellifera])

HSP 1 Score: 84.7297 bits (208), Expect = 2.530e-22
Identity = 49/103 (47.57%), Postives = 60/103 (58.25%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKS 69
            M+YQLYRNTTLG+TLQE+LDEL+Q   ++P LA+KVLLQFD++IN AL                                  REV E A VD+VKIVACD K+
Sbjct:    1 MSYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKAINQALATRVKSRLTFKAGKLNTYRFCDNVWTFMLNDVEFREVQEVAIVDKVKIVACDGKT 103
[Close]
BLAST of EMLSAG00000009644 vs. Select Arthropod Genomes
Match: gb|KPM06009.1| (transcription initiation factor IIA subunit 2-like protein [Sarcoptes scabiei])

HSP 1 Score: 83.5741 bits (205), Expect = 9.888e-22
Identity = 47/104 (45.19%), Postives = 59/104 (56.73%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKSA 70
            M+YQ YRNTT+G+TLQETLDE +Q   +SP LA KVLLQFDR+IN AL+                                 REV +  K+D+VKIVACD K++
Sbjct:    1 MSYQFYRNTTIGNTLQETLDEFIQSGQISPQLASKVLLQFDRTINVALSHRVKARLTFKAGHLKTYRFCDNVWTFVLRDVEFREVQDLIKIDKVKIVACDGKNS 104
[Close]
BLAST of EMLSAG00000009644 vs. Select Arthropod Genomes
Match: gb|KFM59883.1| (Transcription initiation factor IIA subunit 2, partial [Stegodyphus mimosarum])

HSP 1 Score: 73.1738 bits (178), Expect = 4.287e-18
Identity = 41/65 (63.08%), Postives = 47/65 (72.31%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNKREVSEFA-KVDRVKI 62
            M+YQLYRNTTLGHTLQE LDEL+Q   ++  LALKVLLQFD+ INNAL  +  S    KV   KI
Sbjct:    1 MSYQLYRNTTLGHTLQEALDELIQCGQITHQLALKVLLQFDKVINNALASKIKSRLTFKVGHKKI 65
[Close]
BLAST of EMLSAG00000009644 vs. Select Arthropod Genomes
Match: AAF45575.1 (TfIIA-S-2 [Drosophila melanogaster])

HSP 1 Score: 51.6026 bits (122), Expect = 2.591e-9
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQM--LSPALALKVLLQFDRSINNALNKREVSEFA-KVDRVKIVAC 65
            M YQ YR TTLG TLQ+TLDE+M+   ++  +A  VLL++D+SI+ AL     S  +   +R++   C
Sbjct:    1 MNYQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKDHGTSNMSFTAERLETFRC 68
[Close]
BLAST of EMLSAG00000009644 vs. nr
Match: gi|225709032|gb|ACO10362.1| (Transcription initiation factor IIA subunit 2 [Caligus rogercresseyi] >gi|225711164|gb|ACO11428.1| Transcription initiation factor IIA subunit 2 [Caligus rogercresseyi])

HSP 1 Score: 115.161 bits (287), Expect = 1.149e-31
Identity = 66/105 (62.86%), Postives = 69/105 (65.71%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQM--LSPALALKVLLQFDRSINNALNKR--------------------------------EVSEFAKVDRVKIVACDAKSAL 71
            M+YQLYRNTTLGHTL+ETLDELMQM  L+PALALKVLLQFDRSINNALN R                                EVSE AKVDRVKIVACDAKSAL
Sbjct:    1 MSYQLYRNTTLGHTLRETLDELMQMQLLTPALALKVLLQFDRSINNALNTRVKTRLNFKADKLNTYRFCDNVWTFMLNDVEFKEVSELAKVDRVKIVACDAKSAL 105
[Close]
BLAST of EMLSAG00000009644 vs. nr
Match: gi|225717684|gb|ACO14688.1| (Transcription initiation factor IIA subunit 2 [Caligus clemensi])

HSP 1 Score: 112.079 bits (279), Expect = 2.079e-30
Identity = 64/105 (60.95%), Postives = 68/105 (64.76%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQM--LSPALALKVLLQFDRSINNALNKR--------------------------------EVSEFAKVDRVKIVACDAKSAL 71
            M+YQLYRNTTLGHTL+ETLDELMQM  L+PALALKVLLQFDRSIN ALN R                                EVSE AKVDRVKIVACDAKSA+
Sbjct:    1 MSYQLYRNTTLGHTLRETLDELMQMQLLTPALALKVLLQFDRSINTALNTRLKTRLNFKAEKLNTYRFCDNVWTFMLNEVEFKEVSELAKVDRVKIVACDAKSAI 105
[Close]
BLAST of EMLSAG00000009644 vs. nr
Match: gi|225710538|gb|ACO11115.1| (Transcription initiation factor IIA subunit 2 [Caligus rogercresseyi])

HSP 1 Score: 111.694 bits (278), Expect = 3.245e-30
Identity = 64/105 (60.95%), Postives = 68/105 (64.76%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQM--LSPALALKVLLQFDRSINNALNKR--------------------------------EVSEFAKVDRVKIVACDAKSAL 71
            M+YQLYRNTTLGH L+ETLDELMQM  L+PALAL+VLLQFDRSINNALN R                                EVSE AKVDRVKIVACDAKSAL
Sbjct:    1 MSYQLYRNTTLGHALRETLDELMQMQLLTPALALEVLLQFDRSINNALNTRVKTRLNFKADKLNTYRFCDNVWTFMLNDVEFKEVSELAKVDRVKIVACDAKSAL 105
[Close]
BLAST of EMLSAG00000009644 vs. nr
Match: gi|225718774|gb|ACO15233.1| (Transcription initiation factor IIA subunit 2 [Caligus clemensi])

HSP 1 Score: 110.923 bits (276), Expect = 5.571e-30
Identity = 63/105 (60.00%), Postives = 67/105 (63.81%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQM--LSPALALKVLLQFDRSINNALNKR--------------------------------EVSEFAKVDRVKIVACDAKSAL 71
            M+YQLYRNTTLGHT +ETLDELMQM  L+PALALKVLLQFDRSIN ALN R                                EVSE AKVDRVKIVACDAKSA+
Sbjct:    1 MSYQLYRNTTLGHTFRETLDELMQMQLLTPALALKVLLQFDRSINTALNTRLKTRLNFKAEKLNTYRFCDNVWTFMLNEVEFKEVSELAKVDRVKIVACDAKSAI 105
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BLAST of EMLSAG00000009644 vs. nr
Match: gi|195445356|ref|XP_002070290.1| (uncharacterized protein Dwil_GK11978 [Drosophila willistoni] >gi|194166375|gb|EDW81276.1| uncharacterized protein Dwil_GK11978 [Drosophila willistoni])

HSP 1 Score: 100.138 bits (248), Expect = 1.021e-25
Identity = 55/104 (52.88%), Postives = 64/104 (61.54%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKSA 70
            M+YQLYRNTTLG+TLQE+LDEL+Q   ++PALA KVLLQFD+SINNALN+                                REV EF KVD+VKIVACD KS 
Sbjct:    1 MSYQLYRNTTLGNTLQESLDELIQYGQITPALAFKVLLQFDKSINNALNQRVKARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKSG 104
[Close]
BLAST of EMLSAG00000009644 vs. nr
Match: gi|1060148811|ref|XP_017873157.1| (PREDICTED: transcription initiation factor IIA subunit 2 [Drosophila arizonae] >gi|1062651661|ref|XP_017962750.1| PREDICTED: transcription initiation factor IIA subunit 2 [Drosophila navojoa])

HSP 1 Score: 100.138 bits (248), Expect = 1.159e-25
Identity = 55/104 (52.88%), Postives = 64/104 (61.54%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKSA 70
            M+YQLYRNTTLG+TLQE+LDEL+Q   ++PALA KVLLQFD+SINNALN+                                REV EF KVD+VKIVACD KS 
Sbjct:    1 MSYQLYRNTTLGNTLQESLDELIQYGQITPALAFKVLLQFDKSINNALNQRVKARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKSG 104
[Close]
BLAST of EMLSAG00000009644 vs. nr
Match: gi|1060257206|ref|XP_017847169.1| (PREDICTED: transcription initiation factor IIA subunit 2 [Drosophila busckii] >gi|924562931|gb|ALC47589.1| TfIIA-S-2 [Drosophila busckii])

HSP 1 Score: 99.3673 bits (246), Expect = 1.824e-25
Identity = 55/103 (53.40%), Postives = 64/103 (62.14%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKS 69
            M+YQLYRNTTLG+TLQE+LDEL+Q   ++PALA KVLLQFD+SINNALN+                                REV EF KVD+VKIVACD KS
Sbjct:    1 MSYQLYRNTTLGNTLQESLDELIQYGQITPALAFKVLLQFDKSINNALNQKVKARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKS 103
[Close]
BLAST of EMLSAG00000009644 vs. nr
Match: gi|968102145|ref|XP_002054801.2| (uncharacterized protein Dvir_GJ24638 [Drosophila virilis] >gi|946567403|gb|EDW68321.2| uncharacterized protein Dvir_GJ24638 [Drosophila virilis])

HSP 1 Score: 100.138 bits (248), Expect = 1.907e-25
Identity = 55/104 (52.88%), Postives = 64/104 (61.54%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKSA 70
            M+YQLYRNTTLG+TLQE+LDEL+Q   ++PALA KVLLQFD+SINNALN+                                REV EF KVD+VKIVACD KS 
Sbjct:   23 MSYQLYRNTTLGNTLQESLDELIQYGQITPALAFKVLLQFDKSINNALNQRVKARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKSG 126
[Close]
BLAST of EMLSAG00000009644 vs. nr
Match: gi|194910164|ref|XP_001982085.1| (uncharacterized protein Dere_GG12397 [Drosophila erecta] >gi|195331428|ref|XP_002032403.1| GM23533 [Drosophila sechellia] >gi|195503049|ref|XP_002098488.1| uncharacterized protein Dyak_GE23914 [Drosophila yakuba] >gi|195573267|ref|XP_002104615.1| uncharacterized protein Dsimw501_GD18345 [Drosophila simulans] >gi|1036058990|ref|XP_016932629.1| PREDICTED: transcription initiation factor IIA subunit 2 [Drosophila suzukii] >gi|1036736534|ref|XP_016949817.1| PREDICTED: transcription initiation factor IIA subunit 2 [Drosophila biarmipes] >gi|1036758148|ref|XP_017040205.1| PREDICTED: transcription initiation factor IIA subunit 2 [Drosophila ficusphila] >gi|1036811427|ref|XP_017112259.1| PREDICTED: transcription initiation factor IIA subunit 2 [Drosophila elegans] >gi|1037003572|ref|XP_017008780.1| PREDICTED: transcription initiation factor IIA subunit 2 [Drosophila takahashii] >gi|1037092858|ref|XP_017083968.1| PREDICTED: transcription initiation factor IIA subunit 2 [Drosophila eugracilis] >gi|190656723|gb|EDV53955.1| uncharacterized protein Dere_GG12397 [Drosophila erecta] >gi|194121346|gb|EDW43389.1| GM23533 [Drosophila sechellia] >gi|194184589|gb|EDW98200.1| uncharacterized protein Dyak_GE23914 [Drosophila yakuba] >gi|194200542|gb|EDX14118.1| GD18345 [Drosophila simulans] >gi|900915897|gb|KMZ05399.1| uncharacterized protein Dsimw501_GD18345 [Drosophila simulans])

HSP 1 Score: 98.9821 bits (245), Expect = 2.533e-25
Identity = 54/104 (51.92%), Postives = 63/104 (60.58%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKSA 70
            M+YQLYRNTTLG+TLQE+LDEL+Q   ++P LA KVLLQFD+SINNALN+                                REV EF KVD+VKIVACD KS 
Sbjct:    1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKSG 104
[Close]
BLAST of EMLSAG00000009644 vs. nr
Match: gi|1036851684|ref|XP_017023461.1| (PREDICTED: transcription initiation factor IIA subunit 2 [Drosophila kikkawai])

HSP 1 Score: 98.9821 bits (245), Expect = 2.985e-25
Identity = 54/104 (51.92%), Postives = 64/104 (61.54%), Query Frame = 0 
Query:    1 MAYQLYRNTTLGHTLQETLDELMQ--MLSPALALKVLLQFDRSINNALNK--------------------------------REVSEFAKVDRVKIVACDAKSA 70
            M+YQLYRNTTLG+TLQE+LDEL+Q   ++P LA KVLLQFD+SINNALN+                                REV EF KVD+VKIVACD KS+
Sbjct:    1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKSS 104
The following BLAST results are available for this feature:
BLAST of EMLSAG00000009644 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 24
Match NameE-valueIdentityDescription
-2.230e-2550.96symbol:TfIIA-S "Transcription-factor-IIA-S" specie... [more]
-4.825e-2248.04symbol:GTF2A2 "Transcription initiation factor IIA... [more]
-7.013e-2248.04symbol:Gtf2a2 "Transcription initiation factor IIA... [more]
-7.013e-2248.04symbol:Gtf2a2 "general transcription factor IIA, 2... [more]
-7.013e-2248.04symbol:Gtf2a2 "general transcription factor II A, ... [more]
-7.013e-2248.04symbol:GTF2A2 "Transcription initiation factor IIA... [more]
-7.013e-2248.04symbol:GTF2A2 "Transcription initiation factor IIA... [more]
-1.795e-2148.04symbol:GTF2A2 "Transcription initiation factor IIA... [more]
-1.795e-2148.04symbol:GTF2A2 "Transcription initiation factor IIA... [more]
-4.688e-2147.06symbol:gtf2a2 "general transcription factor IIA, 2... [more]

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BLAST of EMLSAG00000009644 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 2
Match NameE-valueIdentityDescription
gi|592784924|gb|GAXK01169644.1|1.429e-2857.55TSA: Calanus finmarchicus comp26_c0_seq1 transcrib... [more]
gi|592832708|gb|GAXK01124836.1|9.461e-533.33TSA: Calanus finmarchicus comp25313_c3_seq1 transc... [more]
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BLAST of EMLSAG00000009644 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000096442.172e-56100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s61:239549... [more]
EMLSAP000000001012.062e-3765.42pep:novel supercontig:LSalAtl2s:LSalAtl2s101:13111... [more]
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BLAST of EMLSAG00000009644 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
gi|1711664|sp|P52656.1|T2AG_DROME1.398e-2650.96RecName: Full=Transcription initiation factor IIA ... [more]
gi|2811071|sp|O08950.1|T2AG_RAT5.242e-2348.04RecName: Full=Transcription initiation factor IIA ... [more]
gi|327488497|sp|B7Q1Q9.1|T2AG_IXOSC7.789e-2349.02RecName: Full=Transcription initiation factor IIA ... [more]
gi|20140818|sp|Q9IA78.1|T2AG_PAROL9.452e-2349.02RecName: Full=Transcription initiation factor IIA ... [more]
gi|1729806|sp|P52657.1|T2AG_HUMAN1.371e-2248.04RecName: Full=Transcription initiation factor IIA ... [more]
gi|20140636|sp|Q90YG6.1|T2AG_ONCMY3.606e-2247.06RecName: Full=Transcription initiation factor IIA ... [more]
gi|74853880|sp|Q54ND1.1|T2AG_DICDI7.308e-1338.38RecName: Full=Transcription initiation factor IIA ... [more]
gi|20140870|sp|Q9NEX2.2|T2AG_CAEEL3.217e-1237.14RecName: Full=Transcription initiation factor IIA ... [more]
gi|20141796|sp|Q39236.2|T2AG_ARATH3.579e-1139.39RecName: Full=Transcription initiation factor IIA ... [more]
gi|122169632|sp|Q0DLD3.1|T2AG_ORYSJ1.917e-1034.34RecName: Full=Transcription initiation factor IIA ... [more]

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BLAST of EMLSAG00000009644 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 10
Match NameE-valueIdentityDescription
AAF56199.16.776e-2750.96Transcription-factor-IIA-S [Drosophila melanogaste... [more]
EAA09250.41.431e-2347.57AGAP004370-PA [Anopheles gambiae str. PEST][more]
gb|EEC12781.1|3.775e-2349.02transcription initiation factor IIA gamma chain, p... [more]
EEB17916.14.219e-2346.60transcription initiation factor IIA gamma chain, p... [more]
gb|EFA06253.1|4.970e-2348.08Transcription initiation factor IIA subunit 2-like... [more]
EFX87528.11.092e-2246.23hypothetical protein DAPPUDRAFT_230366 [Daphnia pu... [more]
XP_623063.12.530e-2247.57PREDICTED: transcription initiation factor IIA sub... [more]
gb|KPM06009.1|9.888e-2245.19transcription initiation factor IIA subunit 2-like... [more]
gb|KFM59883.1|4.287e-1863.08Transcription initiation factor IIA subunit 2, par... [more]
AAF45575.12.591e-942.65TfIIA-S-2 [Drosophila melanogaster][more]
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BLAST of EMLSAG00000009644 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|225709032|gb|ACO10362.1|1.149e-3162.86Transcription initiation factor IIA subunit 2 [Cal... [more]
gi|225717684|gb|ACO14688.1|2.079e-3060.95Transcription initiation factor IIA subunit 2 [Cal... [more]
gi|225710538|gb|ACO11115.1|3.245e-3060.95Transcription initiation factor IIA subunit 2 [Cal... [more]
gi|225718774|gb|ACO15233.1|5.571e-3060.00Transcription initiation factor IIA subunit 2 [Cal... [more]
gi|195445356|ref|XP_002070290.1|1.021e-2552.88uncharacterized protein Dwil_GK11978 [Drosophila w... [more]
gi|1060148811|ref|XP_017873157.1|1.159e-2552.88PREDICTED: transcription initiation factor IIA sub... [more]
gi|1060257206|ref|XP_017847169.1|1.824e-2553.40PREDICTED: transcription initiation factor IIA sub... [more]
gi|968102145|ref|XP_002054801.2|1.907e-2552.88uncharacterized protein Dvir_GJ24638 [Drosophila v... [more]
gi|194910164|ref|XP_001982085.1|2.533e-2551.92uncharacterized protein Dere_GG12397 [Drosophila e... [more]
gi|1036851684|ref|XP_017023461.1|2.985e-2551.92PREDICTED: transcription initiation factor IIA sub... [more]

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BLAST of EMLSAG00000009644 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s61supercontigLSalAtl2s61:239549..239882 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s61-processed-gene-2.20
NoteTranscription initiation factor IIA subunit 2
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000009644 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000009644EMLSAT00000009644-705491Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s61:239549..239882-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000009644-692410 ID=EMLSAG00000009644-692410|Name=EMLSAG00000009644|organism=Lepeophtheirus salmonis|type=gene|length=334bp|location=Sequence derived from alignment at LSalAtl2s61:239549..239882- (Lepeophtheirus salmonis)
ATGGCGTACCAACTTTATCGTAATACAACTCTGGGACATACACTTCAAGA
AACTCTTGATGAACTCATGCAAATGCTCTCACCTGCTTTAGCGTTAAAAG
TACTTCTGCAGTTTGATCGATCCATCAATAATGCTCTCAACAAACGAGTT
AAAATACGTCGAAAAATTAAACACCTATCGCTTTTGCGATAACGTTTGGA
CTTATTTGCTATATGAGGTTGAATTCAAGGAGGTATCAGAATTTGCAAAA
GTAGACCGTGTCAAAATCGTTGCATGTGATGCTAAATCGGCTCTACCAAT
CGTTTCGACGACTAAGTCCTATCTCAATGATTAA
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