EMLSAG00000010111, EMLSAG00000010111-692877 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000010111
Unique NameEMLSAG00000010111-692877
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000010111 vs. GO
Match: - (symbol:mRpS18C "mitochondrial ribosomal protein S18C" species:7227 "Drosophila melanogaster" [GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0003735 "structural constituent of ribosome" evidence=ISS] InterPro:IPR001648 Pfam:PF01084 ProDom:PD002239 EMBL:AE014297 GO:GO:0006412 GO:GO:0003735 GO:GO:0005763 Gene3D:4.10.640.10 PANTHER:PTHR13479 SUPFAM:SSF46911 KO:K02963 CTD:51023 eggNOG:NOG242052 GeneTree:ENSGT00390000003791 OrthoDB:EOG7JDR1D EMBL:BT023241 EMBL:BT029424 RefSeq:NP_524593.1 UniGene:Dm.25062 SMR:Q9VA81 MINT:MINT-1623632 STRING:7227.FBpp0084989 EnsemblMetazoa:FBtr0085625 GeneID:43609 KEGG:dme:Dmel_CG9688 UCSC:CG9688-RA FlyBase:FBgn0039765 InParanoid:Q9VA81 OMA:LCKYNIT GenomeRNAi:43609 NextBio:834829 PRO:PR:Q9VA81 Uniprot:Q9VA81)

HSP 1 Score: 82.8037 bits (203), Expect = 1.119e-19
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
            CILC      SI P YKN KLL+QF SP+TG +Y  HITGLCK  Q+++E  + RAQ    M    K++ +L+DP L DP +P++ + +
Sbjct:   56 CILCKH----SIEPHYKNVKLLSQFQSPYTGRIYGRHITGLCKRRQEQVEQAILRAQQCLLMPGYHKDLDFLQDPKLFDPERPVRPHKY 140
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BLAST of EMLSAG00000010111 vs. GO
Match: - (symbol:MRPS18C "28S ribosomal protein S18c, mitochondrial" species:9913 "Bos taurus" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005763 "mitochondrial small ribosomal subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001648 InterPro:IPR018275 Pfam:PF01084 PRINTS:PR00974 ProDom:PD002239 PROSITE:PS00057 GO:GO:0006412 GO:GO:0003735 GO:GO:0005763 Gene3D:4.10.640.10 PANTHER:PTHR13479 SUPFAM:SSF46911 TIGRFAMs:TIGR00165 HOGENOM:HOG000218466 KO:K02963 TreeFam:TF315059 EMBL:BC112818 RefSeq:NP_001039973.1 UniGene:Bt.35759 ProteinModelPortal:P82917 IntAct:P82917 STRING:9913.ENSBTAP00000024161 PRIDE:P82917 Ensembl:ENSBTAT00000024161 GeneID:613561 KEGG:bta:613561 CTD:51023 eggNOG:NOG242052 GeneTree:ENSGT00390000003791 HOVERGEN:HBG068938 InParanoid:P82917 OMA:DPKICNI OrthoDB:EOG7JDR1D NextBio:20898640 Uniprot:P82917)

HSP 1 Score: 80.8777 bits (198), Expect = 6.251e-19
Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVD 80
            CILC +R       DYKN +LL+QFISP TG +Y  HITGLC   Q E+   +KRAQ LG+M    K+  YLKDP + +
Sbjct:   66 CILCEKRV------DYKNVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQILGFMPVTYKDPAYLKDPKVCN 138
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BLAST of EMLSAG00000010111 vs. GO
Match: - (symbol:Mrps18c "mitochondrial ribosomal protein S18C" species:10090 "Mus musculus" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] InterPro:IPR001648 InterPro:IPR018275 Pfam:PF01084 ProDom:PD002239 PROSITE:PS00057 MGI:MGI:1915985 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 GO:GO:0005763 Gene3D:4.10.640.10 PANTHER:PTHR13479 SUPFAM:SSF46911 TIGRFAMs:TIGR00165 HOGENOM:HOG000218466 KO:K02963 TreeFam:TF315059 CTD:51023 eggNOG:NOG242052 GeneTree:ENSGT00390000003791 HOVERGEN:HBG068938 OMA:DPKICNI OrthoDB:EOG7JDR1D EMBL:AK004139 EMBL:AK145935 EMBL:BC028442 RefSeq:NP_081102.1 UniGene:Mm.25585 ProteinModelPortal:Q8R2L5 SMR:Q8R2L5 PhosphoSite:Q8R2L5 PaxDb:Q8R2L5 PRIDE:Q8R2L5 Ensembl:ENSMUST00000016977 GeneID:68735 KEGG:mmu:68735 UCSC:uc008yib.1 InParanoid:Q8R2L5 NextBio:327806 PRO:PR:Q8R2L5 ArrayExpress:Q8R2L5 Bgee:Q8R2L5 CleanEx:MM_MRPS18C Genevestigator:Q8R2L5 Uniprot:Q8R2L5)

HSP 1 Score: 80.1073 bits (196), Expect = 1.002e-18
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVD 80
            C+LC +R       DYKN +LL+QFISP TG +Y  HITGLC   Q E+   +KRAQ +G+M    K+  YLKDP + +
Sbjct:   66 CVLCEKRV------DYKNVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQKMGFMPVTYKDPAYLKDPRVCN 138
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BLAST of EMLSAG00000010111 vs. GO
Match: - (symbol:Mrps18c "mitochondrial ribosomal protein S18C" species:10116 "Rattus norvegicus" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005763 "mitochondrial small ribosomal subunit" evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001648 InterPro:IPR018275 Pfam:PF01084 ProDom:PD002239 PROSITE:PS00057 RGD:1307997 GO:GO:0006412 GO:GO:0003735 GO:GO:0005763 Gene3D:4.10.640.10 PANTHER:PTHR13479 SUPFAM:SSF46911 TIGRFAMs:TIGR00165 KO:K02963 TreeFam:TF315059 CTD:51023 GeneTree:ENSGT00390000003791 OMA:DPKICNI OrthoDB:EOG7JDR1D EMBL:CH474022 EMBL:AABR06077558 RefSeq:NP_001099466.1 UniGene:Rn.105741 Ensembl:ENSRNOT00000002962 GeneID:289469 KEGG:rno:289469 NextBio:629867 PRO:PR:D4A4V1 Uniprot:D4A4V1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.556e-18
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVD 80
            C+LC +R       DYKN +LL+QFISP TG +Y  HITGLC   Q E+   +KRAQ +G+M    K+  YLKDP + +
Sbjct:   66 CVLCEKRV------DYKNVQLLSQFISPFTGCIYGRHITGLCGKKQKEVTKAIKRAQKMGFMPVTYKDPAYLKDPKVCN 138
[Close]
BLAST of EMLSAG00000010111 vs. GO
Match: - (symbol:MRPS18C "28S ribosomal protein S18c, mitochondrial" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=NAS] [GO:0005763 "mitochondrial small ribosomal subunit" evidence=IDA] [GO:0006412 "translation" evidence=NAS] InterPro:IPR001648 InterPro:IPR018275 Pfam:PF01084 ProDom:PD002239 PROSITE:PS00057 GO:GO:0006412 GO:GO:0003735 GO:GO:0005763 UniGene:Hs.334772 Gene3D:4.10.640.10 PANTHER:PTHR13479 SUPFAM:SSF46911 TIGRFAMs:TIGR00165 HOGENOM:HOG000218466 KO:K02963 TreeFam:TF315059 CTD:51023 eggNOG:NOG242052 HOVERGEN:HBG068938 OMA:DPKICNI OrthoDB:EOG7JDR1D EMBL:AF151892 EMBL:BC005186 RefSeq:NP_057151.1 UniGene:Hs.436161 ProteinModelPortal:Q9Y3D5 SMR:Q9Y3D5 BioGrid:119229 STRING:9606.ENSP00000295491 PhosphoSite:Q9Y3D5 DMDM:24212202 PaxDb:Q9Y3D5 PeptideAtlas:Q9Y3D5 PRIDE:Q9Y3D5 DNASU:51023 Ensembl:ENST00000295491 GeneID:51023 KEGG:hsa:51023 UCSC:uc003hor.4 GeneCards:GC04P084301 H-InvDB:HIX0034634 HGNC:HGNC:16633 HPA:HPA050404 MIM:611983 neXtProt:NX_Q9Y3D5 PharmGKB:PA31005 InParanoid:Q9Y3D5 PhylomeDB:Q9Y3D5 ChiTaRS:MRPS18C GenomeRNAi:51023 NextBio:53554 PRO:PR:Q9Y3D5 ArrayExpress:Q9Y3D5 Bgee:Q9Y3D5 CleanEx:HS_MRPS18C Genevestigator:Q9Y3D5 Uniprot:Q9Y3D5)

HSP 1 Score: 76.6406 bits (187), Expect = 2.107e-17
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDP 76
            CILC +        DYKN +LL+QF+SP TG +Y  HITGLC   Q E+   +KRAQ +G+M    K+  YLKDP
Sbjct:   65 CILCGKHV------DYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGFMPVTYKDPAYLKDP 133
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BLAST of EMLSAG00000010111 vs. GO
Match: - (symbol:MRPS18C "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005763 "mitochondrial small ribosomal subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001648 InterPro:IPR018275 Pfam:PF01084 PRINTS:PR00974 ProDom:PD002239 PROSITE:PS00057 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:4.10.640.10 PANTHER:PTHR13479 SUPFAM:SSF46911 TIGRFAMs:TIGR00165 TreeFam:TF315059 GeneTree:ENSGT00390000003791 OrthoDB:EOG7JDR1D EMBL:AADN03003883 Ensembl:ENSGALT00000038003 Uniprot:F1NCZ4)

HSP 1 Score: 75.0998 bits (183), Expect = 2.986e-17
Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVD 80
            CILC       I  DYKN +LL+QF+SP+TG +Y  HITGLC   Q E+   +KRA  LG+M    K   +L DP + +
Sbjct:   19 CILC------GINVDYKNVQLLSQFVSPYTGRIYGRHITGLCNKKQKEISKAIKRAHILGFMPVMFKNPSFLTDPKICN 91
[Close]
BLAST of EMLSAG00000010111 vs. GO
Match: - (symbol:mrps18c "mitochondrial ribosomal protein S18C" species:7955 "Danio rerio" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] InterPro:IPR001648 InterPro:IPR018275 Pfam:PF01084 ProDom:PD002239 PROSITE:PS00057 ZFIN:ZDB-GENE-060503-609 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:BX649525 Gene3D:4.10.640.10 PANTHER:PTHR13479 SUPFAM:SSF46911 TIGRFAMs:TIGR00165 TreeFam:TF315059 eggNOG:NOG242052 GeneTree:ENSGT00390000003791 HOVERGEN:HBG068938 OMA:DPKICNI OrthoDB:EOG7JDR1D Ensembl:ENSDART00000101462 InParanoid:Q1LVP7 PRO:PR:Q1LVP7 Uniprot:Q1LVP7)

HSP 1 Score: 75.8702 bits (185), Expect = 3.686e-17
Identity = 33/75 (44.00%), Postives = 51/75 (68.00%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDP 76
            CILC      ++  D+KN +LL+QFISPHTG +Y  HITGLC   Q E+   +K+++ +G+MS  +K+  +++DP
Sbjct:   59 CILC------NVTVDFKNVQLLSQFISPHTGRIYGRHITGLCGRKQKEVTKAIKKSRSMGFMSVTLKDPLFIQDP 127
[Close]
BLAST of EMLSAG00000010111 vs. GO
Match: - (symbol:T14B4.2 species:6239 "Caenorhabditis elegans" [GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001648 Pfam:PF01084 ProDom:PD002239 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:FO080626 Gene3D:4.10.640.10 PANTHER:PTHR13479 SUPFAM:SSF46911 HOGENOM:HOG000218466 KO:K02963 eggNOG:NOG242052 OrthoDB:EOG7JDR1D PIR:T28894 RefSeq:NP_495374.2 UniGene:Cel.14367 ProteinModelPortal:Q22483 SMR:Q22483 STRING:6239.T14B4.2 PaxDb:Q22483 PRIDE:Q22483 GeneID:188492 KEGG:cel:CELE_T14B4.2 UCSC:T14B4.2 CTD:188492 WormBase:T14B4.2 InParanoid:Q22483 NextBio:939010 PRO:PR:Q22483 Uniprot:Q22483)

HSP 1 Score: 73.559 bits (179), Expect = 3.318e-16
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
            C+LC    +  +  DYKN +LL QF+S  +G VY  HITGLC   + +L   + +++  G+M   +K+  Y +DP L DP KPI+ + F
Sbjct:   54 CLLC----STGVELDYKNSRLLQQFVSTFSGRVYDRHITGLCDENKKKLIEAIAKSRRAGFMPIFVKDPKYTRDPKLFDPLKPIRPHSF 138
[Close]
BLAST of EMLSAG00000010111 vs. GO
Match: - (symbol:CELE_T14B4.2 "Protein T14B4.2" species:6239 "Caenorhabditis elegans" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001648 Pfam:PF01084 ProDom:PD002239 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:FO080626 Gene3D:4.10.640.10 PANTHER:PTHR13479 SUPFAM:SSF46911 HOGENOM:HOG000218466 KO:K02963 eggNOG:NOG242052 OrthoDB:EOG7JDR1D PIR:T28894 RefSeq:NP_495374.2 UniGene:Cel.14367 ProteinModelPortal:Q22483 SMR:Q22483 STRING:6239.T14B4.2 PaxDb:Q22483 PRIDE:Q22483 GeneID:188492 KEGG:cel:CELE_T14B4.2 UCSC:T14B4.2 CTD:188492 WormBase:T14B4.2 InParanoid:Q22483 NextBio:939010 PRO:PR:Q22483 Uniprot:Q22483)

HSP 1 Score: 73.559 bits (179), Expect = 3.318e-16
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
            C+LC    +  +  DYKN +LL QF+S  +G VY  HITGLC   + +L   + +++  G+M   +K+  Y +DP L DP KPI+ + F
Sbjct:   54 CLLC----STGVELDYKNSRLLQQFVSTFSGRVYDRHITGLCDENKKKLIEAIAKSRRAGFMPIFVKDPKYTRDPKLFDPLKPIRPHSF 138
[Close]
BLAST of EMLSAG00000010111 vs. GO
Match: - (symbol:MRPS18C "28S ribosomal protein S18c, mitochondrial" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001648 Pfam:PF01084 ProDom:PD002239 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AC096768 Gene3D:4.10.640.10 PANTHER:PTHR13479 SUPFAM:SSF46911 HGNC:HGNC:16633 ChiTaRS:MRPS18C ProteinModelPortal:H0YAG5 Ensembl:ENST00000509970 NextBio:35521054 Uniprot:H0YAG5)

HSP 1 Score: 65.4698 bits (158), Expect = 2.098e-13
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0 
Query:   22 LLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDP 76
            LL+QF+SP TG +Y  HITGLC   Q E+   +KRAQ +G+M    K+  YLKDP
Sbjct:   50 LLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGFMPVTYKDPAYLKDP 104
[Close]
BLAST of EMLSAG00000010111 vs. C. finmarchicus
Match: gi|592925903|gb|GAXK01032522.1| (TSA: Calanus finmarchicus comp20890_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 111.694 bits (278), Expect = 2.438e-30
Identity = 53/92 (57.61%), Postives = 66/92 (71.74%), Query Frame = 0 
Query:    1 MCILCPRRY--AISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
            MCILCPR+Y    +  P Y NPKLL+QF SPHTG VY SHITGLC SMQ  +  EV R+ D G MST+++ V YL+DP L + ++PIK NP+
Sbjct:   80 MCILCPRKYEPGQAPSPSYLNPKLLSQFTSPHTGKVYDSHITGLCSSMQALVSREVLRSHDAGLMSTKVRNVEYLQDPQLFNSSRPIKPNPY 355
[Close]
BLAST of EMLSAG00000010111 vs. C. finmarchicus
Match: gi|592931430|gb|GAXK01027123.1| (TSA: Calanus finmarchicus comp18907_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 43.8986 bits (102), Expect = 1.857e-5
Identity = 21/71 (29.58%), Postives = 39/71 (54.93%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHY 72
            C +C   Y +    DY+N  LL QF+ P+TG V   + T +C+    +++  +++A+D G++     +V Y
Sbjct:  506 CPICRDEYLVI---DYRNKALLKQFMDPYTGQVLHPNKTHICQKQWRKMQVHMEKAKDHGFLDIDAPQVEY 709
[Close]
BLAST of EMLSAG00000010111 vs. C. finmarchicus
Match: gi|592931431|gb|GAXK01027122.1| (TSA: Calanus finmarchicus comp18907_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.8986 bits (102), Expect = 1.883e-5
Identity = 21/71 (29.58%), Postives = 39/71 (54.93%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHY 72
            C +C   Y +    DY+N  LL QF+ P+TG V   + T +C+    +++  +++A+D G++     +V Y
Sbjct:  519 CPICRDEYLVI---DYRNKALLKQFMDPYTGQVLHPNKTHICQKQWRKMQVHMEKAKDHGFLDIDAPQVEY 722
[Close]
BLAST of EMLSAG00000010111 vs. C. finmarchicus
Match: gi|592790015|gb|GAXK01164553.1| (TSA: Calanus finmarchicus comp8448985_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.4906 bits (62), Expect = 1.773e+0
Identity = 19/48 (39.58%), Postives = 26/48 (54.17%), Query Frame = 0 
Query:   48 DELENEVKRAQDLGYMSTQMKEVHYLKDP-------VLVDPTKPIKKN 88
            DELE E+KR QDL   S Q K +  L++P       +L++ T  I  N
Sbjct:   70 DELETEMKRTQDL---SIQNKTLKNLREPPGIEDKQLLLNDTNSITNN 204
[Close]
BLAST of EMLSAG00000010111 vs. L. salmonis peptides
Match: EMLSAP00000010111 (pep:novel supercontig:LSalAtl2s:LSalAtl2s668:156455:162196:-1 gene:EMLSAG00000010111 transcript:EMLSAT00000010111 description:"snap_masked-LSalAtl2s668-processed-gene-1.14")

HSP 1 Score: 188.734 bits (478), Expect = 2.780e-63
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 
Query:    1 MCILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
            MCILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF
Sbjct:    1 MCILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
[Close]
BLAST of EMLSAG00000010111 vs. SwissProt
Match: gi|108935898|sp|P82917.2|RT18C_BOVIN (RecName: Full=28S ribosomal protein S18c, mitochondrial; Short=MRP-S18-c; Short=Mrps18-c; Short=S18mt-c; AltName: Full=28S ribosomal protein S18-1, mitochondrial; Short=MRP-S18-1; Flags: Precursor)

HSP 1 Score: 80.8777 bits (198), Expect = 6.498e-20
Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVD 80
            CILC +R       DYKN +LL+QFISP TG +Y  HITGLC   Q E+   +KRAQ LG+M    K+  YLKDP + +
Sbjct:   66 CILCEKRV------DYKNVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQILGFMPVTYKDPAYLKDPKVCN 138
[Close]
BLAST of EMLSAG00000010111 vs. SwissProt
Match: gi|24212186|sp|Q8R2L5.1|RT18C_MOUSE (RecName: Full=28S ribosomal protein S18c, mitochondrial; Short=MRP-S18-c; Short=Mrps18-c; Short=S18mt-c; AltName: Full=28S ribosomal protein S18-1, mitochondrial; Short=MRP-S18-1; Flags: Precursor)

HSP 1 Score: 80.1073 bits (196), Expect = 1.059e-19
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVD 80
            C+LC +R       DYKN +LL+QFISP TG +Y  HITGLC   Q E+   +KRAQ +G+M    K+  YLKDP + +
Sbjct:   66 CVLCEKRV------DYKNVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQKMGFMPVTYKDPAYLKDPRVCN 138
[Close]
BLAST of EMLSAG00000010111 vs. SwissProt
Match: gi|24212202|sp|Q9Y3D5.1|RT18C_HUMAN (RecName: Full=28S ribosomal protein S18c, mitochondrial; Short=MRP-S18-c; Short=Mrps18-c; Short=S18mt-c; AltName: Full=28S ribosomal protein S18-1, mitochondrial; Short=MRP-S18-1; Flags: Precursor)

HSP 1 Score: 76.6406 bits (187), Expect = 2.475e-18
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDP 76
            CILC +        DYKN +LL+QF+SP TG +Y  HITGLC   Q E+   +KRAQ +G+M    K+  YLKDP
Sbjct:   65 CILCGKHV------DYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGFMPVTYKDPAYLKDP 133
[Close]
BLAST of EMLSAG00000010111 vs. SwissProt
Match: gi|108935897|sp|P82918.2|RT18B_BOVIN (RecName: Full=28S ribosomal protein S18b, mitochondrial; Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName: Full=28S ribosomal protein S18-2, mitochondrial; Short=MRP-S18-2)

HSP 1 Score: 48.1358 bits (113), Expect = 7.885e-7
Identity = 19/55 (34.55%), Postives = 35/55 (63.64%), Query Frame = 0 
Query:   16 DYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEV 70
            D++N KLL QF+  HTG+++ +  TG+C     +L   +++A+D G +S  + +V
Sbjct:  116 DFRNVKLLKQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARDHGLLSYHIPQV 170
[Close]
BLAST of EMLSAG00000010111 vs. Select Arthropod Genomes
Match: EFX77265.1 (hypothetical protein DAPPUDRAFT_305829 [Daphnia pulex])

HSP 1 Score: 92.0485 bits (227), Expect = 1.035e-24
Identity = 42/85 (49.41%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIK 86
            C+LC  +Y +++  DYKN +LL+QF+SP TG VY+ +ITGLCKS Q  +E+E+ +AQ+ GY++  +K+V Y KDP L DP +P++
Sbjct:   59 CVLC--KYDVNV--DYKNARLLSQFLSPFTGKVYERNITGLCKSKQKIVESEIIKAQNAGYLAIMLKKVEYFKDPKLCDPDRPVR 139
[Close]
BLAST of EMLSAG00000010111 vs. Select Arthropod Genomes
Match: EAA10088.3 (AGAP008773-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 87.8113 bits (216), Expect = 6.300e-23
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIK 86
            C+LC       I PDYKN +LL+QF SP+TG VY  +ITGLCK+  +++E E+ +AQ+ G+M T  K V +L DP L DP K I+
Sbjct:   64 CVLCKH----GIDPDYKNVQLLSQFQSPYTGRVYGRNITGLCKNRHEQVEREIIKAQNAGFMPTYHKAVEFLNDPKLFDPEKAIR 144
[Close]
BLAST of EMLSAG00000010111 vs. Select Arthropod Genomes
Match: gb|EFA10545.1| (28S ribosomal protein S18c, mitochondrial-like Protein [Tribolium castaneum])

HSP 1 Score: 86.6557 bits (213), Expect = 9.188e-23
Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
            C+LC  +    I P+YKN KLL+QF SP+TG VY  HITGLC + Q  +E E+ +AQ+ G M+T +KE  YLKDP L D   PI+ + F
Sbjct:   47 CLLCRHK----IIPNYKNVKLLSQFQSPYTGRVYGKHITGLCDTQQKLVEAEIIKAQNAGLMATYLKEPCYLKDPKLFDADNPIRPHRF 131
[Close]
BLAST of EMLSAG00000010111 vs. Select Arthropod Genomes
Match: gb|KFM79943.1| (28S ribosomal protein S18c, mitochondrial, partial [Stegodyphus mimosarum])

HSP 1 Score: 87.0409 bits (214), Expect = 1.124e-22
Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 0 
Query:    1 MCILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVD 80
            +CILC  +Y I++  DYKN +LL+QF+SP+TG +Y  HITGLCK  Q+ ++  +KR++DLGYM   +K   YL+DP L D
Sbjct:   68 VCILC--KYKINV--DYKNTRLLSQFVSPYTGFLYDRHITGLCKEQQNLIKAAIKRSRDLGYMPYMLKNPKYLRDPKLFD 143
[Close]
BLAST of EMLSAG00000010111 vs. Select Arthropod Genomes
Match: AAF57041.2 (mitochondrial ribosomal protein S18C [Drosophila melanogaster])

HSP 1 Score: 82.8037 bits (203), Expect = 5.262e-21
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
            CILC      SI P YKN KLL+QF SP+TG +Y  HITGLCK  Q+++E  + RAQ    M    K++ +L+DP L DP +P++ + +
Sbjct:   56 CILCKH----SIEPHYKNVKLLSQFQSPYTGRIYGRHITGLCKRRQEQVEQAILRAQQCLLMPGYHKDLDFLQDPKLFDPERPVRPHKY 140
[Close]
BLAST of EMLSAG00000010111 vs. Select Arthropod Genomes
Match: gb|KPM09998.1| (28S ribosomal protein S18c, mitochondrial-like protein [Sarcoptes scabiei])

HSP 1 Score: 81.6481 bits (200), Expect = 9.290e-21
Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
            CILC  +Y I I  DYKN +L++QF+SP+TG +Y  HITGLC++    L  E  RA   G +S   ++  Y  DP L DPT+P + NP+
Sbjct:   42 CILC--KYNIQI--DYKNIRLISQFVSPYTGRLYDKHITGLCEAQHRALRKEFIRAAKFGLISPYYRDPKYNDDPKLFDPTRPQRVNPY 126
[Close]
BLAST of EMLSAG00000010111 vs. Select Arthropod Genomes
Match: XP_003249593.1 (PREDICTED: 28S ribosomal protein S18c, mitochondrial [Apis mellifera])

HSP 1 Score: 80.8777 bits (198), Expect = 2.698e-20
Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 0 
Query:    1 MCILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIK 86
            +CILC     ++I PDYKN +LL+QF S +TG +Y+ HITGLC+  Q ++E E+ +AQ  G M    K+  +  DP+L DP  P K
Sbjct:   57 LCILC----ELNIEPDYKNVRLLSQFQSRYTGRIYEKHITGLCEYKQKKVEQEIIKAQHAGLMGYMTKDPKFYHDPMLFDPNFPFK 138
[Close]
BLAST of EMLSAG00000010111 vs. Select Arthropod Genomes
Match: gb|EEC11155.1| (ribosomal protein S18C, putative [Ixodes scapularis])

HSP 1 Score: 79.337 bits (194), Expect = 3.005e-20
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNP 89
            CILC  ++ I +  DYKN KLL+QF+S +TG +Y+ HITGLC+  Q  ++ E+ +A+  G M   +K   +LKDP L DP  P + NP
Sbjct:   12 CILC--KHNIDV--DYKNVKLLSQFVSSYTGKIYEKHITGLCEKQQRRVKTEIFKARKCGLMPHYLKMAKFLKDPRLFDPFNPSRPNP 95
[Close]
BLAST of EMLSAG00000010111 vs. Select Arthropod Genomes
Match: EEB19349.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 73.1738 bits (178), Expect = 2.435e-17
Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIK 86
            CILC      +I PD++N +LL+QFIS HTG VY  HITGLC+  Q ++E E+ +A+    M +++K   +  DP L +   P++
Sbjct:   58 CILC----KYNITPDFRNVRLLSQFISRHTGKVYGRHITGLCEHKQKQVEKEIIKARCCWLMFSKIKNPKFFGDPSLYNVNNPLR 138
[Close]
BLAST of EMLSAG00000010111 vs. Select Arthropod Genomes
Match: AAN11068.1 (mitochondrial ribosomal protein S18B, isoform B [Drosophila melanogaster])

HSP 1 Score: 49.2914 bits (116), Expect = 9.952e-8
Identity = 26/63 (41.27%), Postives = 37/63 (58.73%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMS 64
            C +C   Y +    DY+N +LL QFISPH+G V     TGLC+     L   V++A+D GY++
Sbjct:  123 CPICRDEYLV---LDYRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLT 182
[Close]
BLAST of EMLSAG00000010111 vs. nr
Match: gi|225718232|gb|ACO14962.1| (28S ribosomal protein S18c, mitochondrial precursor [Caligus clemensi])

HSP 1 Score: 173.711 bits (439), Expect = 1.375e-53
Identity = 77/90 (85.56%), Postives = 88/90 (97.78%), Query Frame = 0 
Query:    1 MCILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
            MCILCPRRYA+ IRPDYKNPKLLAQF+SPHTGLVYKSHITGLC+ MQ+E+ENEVK+AQ+LG+MSTQMKE+HYLKDP+LVDPTKPIKKNP+
Sbjct:   98 MCILCPRRYAVPIRPDYKNPKLLAQFVSPHTGLVYKSHITGLCQFMQEEVENEVKKAQNLGFMSTQMKEIHYLKDPILVDPTKPIKKNPY 187
[Close]
BLAST of EMLSAG00000010111 vs. nr
Match: gi|157120726|ref|XP_001659742.1| (AAEL001615-PA [Aedes aegypti] >gi|108883031|gb|EAT47256.1| AAEL001615-PA [Aedes aegypti])

HSP 1 Score: 95.1301 bits (235), Expect = 2.757e-23
Identity = 44/85 (51.76%), Postives = 63/85 (74.12%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIK 86
            CILC  R+ I+  PDYKN +LL+QF SP+TG +Y  HITGLC+  Q+++ENE+ +AQ+ G+M T  K V +L+DP L DP +P++
Sbjct:   56 CILC--RHNIT--PDYKNVQLLSQFQSPYTGRIYGKHITGLCRRRQEQVENEIIKAQNAGFMPTYHKAVEFLEDPKLFDPERPVR 136
[Close]
BLAST of EMLSAG00000010111 vs. nr
Match: gi|357613436|gb|EHJ68500.1| (mitochondrial 28S ribosomal protein S18c [Danaus plexippus])

HSP 1 Score: 93.5893 bits (231), Expect = 1.183e-22
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
            CILC     ++IRPDYKN +LL+QF SP+TG +Y  HITGLCK+ Q  +++E+ +AQ+ GYM    K+  +LKDP L DP  PI+ + F
Sbjct:   51 CILC----KLNIRPDYKNYRLLSQFQSPYTGRIYGRHITGLCKAKQALVDSEITKAQNSGYMPYYYKDKAFLKDPKLFDPENPIRFHRF 135
[Close]
BLAST of EMLSAG00000010111 vs. nr
Match: gi|1000206780|gb|KXJ77613.1| (hypothetical protein RP20_CCG007047 [Aedes albopictus])

HSP 1 Score: 92.8189 bits (229), Expect = 1.301e-22
Identity = 42/85 (49.41%), Postives = 60/85 (70.59%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIK 86
            CILC      +I PDYKN +LL+QF SP+TG +Y  HITGLC+  Q+++E E+ +AQ+ G+M T  K V +L+DP L DP +P++
Sbjct:   34 CILCKN----NITPDYKNVQLLSQFQSPYTGRIYGKHITGLCRRRQEQVETEIIKAQNAGFMPTYHKAVEFLEDPKLFDPERPVR 114
[Close]
BLAST of EMLSAG00000010111 vs. nr
Match: gi|1121143348|ref|XP_019558817.1| (PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Aedes albopictus])

HSP 1 Score: 93.2041 bits (230), Expect = 1.664e-22
Identity = 42/85 (49.41%), Postives = 60/85 (70.59%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIK 86
            CILC      +I PDYKN +LL+QF SP+TG +Y  HITGLC+  Q+++E E+ +AQ+ G+M T  K V +L+DP L DP +P++
Sbjct:   56 CILCKN----NITPDYKNVQLLSQFQSPYTGRIYGKHITGLCRRRQEQVETEIIKAQNAGFMPTYHKAVEFLEDPKLFDPERPVR 136
[Close]
BLAST of EMLSAG00000010111 vs. nr
Match: gi|1022769094|gb|KZS13605.1| (28S ribosomal protein S18c [Daphnia magna])

HSP 1 Score: 93.5893 bits (231), Expect = 1.703e-22
Identity = 40/85 (47.06%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIK 86
            C+LC  +Y + +  DYKN +LL+QF+SP TG VY+ +ITGLCK+ Q  +E E+ ++Q+ GY++  +K+V Y++DP L DP++PI+
Sbjct:   61 CVLC--KYGVEV--DYKNARLLSQFLSPFTGKVYEKNITGLCKAKQKSVEREIIKSQNAGYLAVMLKKVEYIRDPKLCDPSRPIR 141
[Close]
BLAST of EMLSAG00000010111 vs. nr
Match: gi|1121152841|ref|XP_019563265.1| (PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Aedes albopictus])

HSP 1 Score: 93.2041 bits (230), Expect = 1.719e-22
Identity = 42/85 (49.41%), Postives = 60/85 (70.59%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIK 86
            CILC      +I PDYKN +LL+QF SP+TG +Y  HITGLC+  Q+++E E+ +AQ+ G+M T  K V +L+DP L DP +P++
Sbjct:   56 CILCKN----NITPDYKNVQLLSQFQSPYTGRIYGKHITGLCRRRQEQVETEIIKAQNAGFMPTYHKAVEFLEDPKLFDPERPVR 136
[Close]
BLAST of EMLSAG00000010111 vs. nr
Match: gi|557768305|ref|XP_005183832.1| (PREDICTED: 28S ribosomal protein S18c, mitochondrial [Musca domestica])

HSP 1 Score: 93.5893 bits (231), Expect = 2.044e-22
Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0 
Query:    1 MCILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIK 86
            +CILC      +I PDYKN KLL+QF SP+TG +Y  HITGLCK  Q+++E  ++RAQ    M T  K++ +LKDP L DP KPI+
Sbjct:   67 VCILCKH----NITPDYKNVKLLSQFQSPYTGRIYGRHITGLCKQKQEDVEKAIRRAQHCALMPTYHKDLEFLKDPKLFDPEKPIR 148
[Close]
BLAST of EMLSAG00000010111 vs. nr
Match: gi|930651317|gb|KPI93660.1| (28S ribosomal protein S18c, mitochondrial, partial [Papilio xuthus])

HSP 1 Score: 91.6633 bits (226), Expect = 3.940e-22
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
            CILC     + I PDYKN +LL+QF SP+TG +Y  HITGLCK  Q+ +E+E+K+AQ+  YM    K+  +LKDP L DP  PI+ + F
Sbjct:   37 CILC----KLKITPDYKNYRLLSQFQSPYTGRIYGRHITGLCKKKQELVESEIKKAQNCAYMPYFYKDKMFLKDPKLFDPENPIRSHRF 121
[Close]
BLAST of EMLSAG00000010111 vs. nr
Match: gi|321466269|gb|EFX77265.1| (hypothetical protein DAPPUDRAFT_305829 [Daphnia pulex])

HSP 1 Score: 92.0485 bits (227), Expect = 5.065e-22
Identity = 42/85 (49.41%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIK 86
            C+LC  +Y +++  DYKN +LL+QF+SP TG VY+ +ITGLCKS Q  +E+E+ +AQ+ GY++  +K+V Y KDP L DP +P++
Sbjct:   59 CVLC--KYDVNV--DYKNARLLSQFLSPFTGKVYERNITGLCKSKQKIVESEIIKAQNAGYLAIMLKKVEYFKDPKLCDPDRPVR 139
[Close]
BLAST of EMLSAG00000010111 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold41_size498431-snap-gene-1.15 (protein:Tk00190 transcript:maker-scaffold41_size498431-snap-gene-1.15-mRNA-1 annotation:"28s ribosomal protein mitochondrial precursor")

HSP 1 Score: 135.961 bits (341), Expect = 2.173e-42
Identity = 60/89 (67.42%), Postives = 70/89 (78.65%), Query Frame = 0 
Query:    2 CILCPRRYAISIRPDYKNPKLLAQFISPHTGLVYKSHITGLCKSMQDELENEVKRAQDLGYMSTQMKEVHYLKDPVLVDPTKPIKKNPF 90
            CILCPRRYA +I+P YKNPKLLAQF+SPHTG VY+SHITGLC  MQ  +E E K AQ  G + T+MKEVHYLKDP L +P + +K NPF
Sbjct:  110 CILCPRRYAEAIQPSYKNPKLLAQFVSPHTGRVYESHITGLCAFMQQSVEREAKIAQKFGLLGTKMKEVHYLKDPALFNPVRSVKPNPF 198
The following BLAST results are available for this feature:
BLAST of EMLSAG00000010111 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 24
Match NameE-valueIdentityDescription
-1.119e-1946.07symbol:mRpS18C "mitochondrial ribosomal protein S1... [more]
-6.251e-1950.63symbol:MRPS18C "28S ribosomal protein S18c, mitoch... [more]
-1.002e-1848.10symbol:Mrps18c "mitochondrial ribosomal protein S1... [more]
-1.556e-1848.10symbol:Mrps18c "mitochondrial ribosomal protein S1... [more]
-2.107e-1749.33symbol:MRPS18C "28S ribosomal protein S18c, mitoch... [more]
-2.986e-1745.57symbol:MRPS18C "Uncharacterized protein" species:9... [more]
-3.686e-1744.00symbol:mrps18c "mitochondrial ribosomal protein S1... [more]
-3.318e-1639.33symbol:T14B4.2 species:6239 "Caenorhabditis elegan... [more]
-3.318e-1639.33symbol:CELE_T14B4.2 "Protein T14B4.2" species:6239... [more]
-2.098e-1352.73symbol:MRPS18C "28S ribosomal protein S18c, mitoch... [more]

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BLAST of EMLSAG00000010111 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 4
Match NameE-valueIdentityDescription
gi|592925903|gb|GAXK01032522.1|2.438e-3057.61TSA: Calanus finmarchicus comp20890_c0_seq1 transc... [more]
gi|592931430|gb|GAXK01027123.1|1.857e-529.58TSA: Calanus finmarchicus comp18907_c0_seq2 transc... [more]
gi|592931431|gb|GAXK01027122.1|1.883e-529.58TSA: Calanus finmarchicus comp18907_c0_seq1 transc... [more]
gi|592790015|gb|GAXK01164553.1|1.773e+039.58TSA: Calanus finmarchicus comp8448985_c0_seq1 tran... [more]
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BLAST of EMLSAG00000010111 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000101112.780e-63100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s668:15645... [more]
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BLAST of EMLSAG00000010111 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
gi|108935898|sp|P82917.2|RT18C_BOVIN6.498e-2050.63RecName: Full=28S ribosomal protein S18c, mitochon... [more]
gi|24212186|sp|Q8R2L5.1|RT18C_MOUSE1.059e-1948.10RecName: Full=28S ribosomal protein S18c, mitochon... [more]
gi|24212202|sp|Q9Y3D5.1|RT18C_HUMAN2.475e-1849.33RecName: Full=28S ribosomal protein S18c, mitochon... [more]
gi|108935897|sp|P82918.2|RT18B_BOVIN7.885e-734.55RecName: Full=28S ribosomal protein S18b, mitochon... [more]
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BLAST of EMLSAG00000010111 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 12
Match NameE-valueIdentityDescription
EFX77265.11.035e-2449.41hypothetical protein DAPPUDRAFT_305829 [Daphnia pu... [more]
EAA10088.36.300e-2349.41AGAP008773-PA [Anopheles gambiae str. PEST][more]
gb|EFA10545.1|9.188e-2350.5628S ribosomal protein S18c, mitochondrial-like Pro... [more]
gb|KFM79943.1|1.124e-2251.2528S ribosomal protein S18c, mitochondrial, partial... [more]
AAF57041.25.262e-2146.07mitochondrial ribosomal protein S18C [Drosophila m... [more]
gb|KPM09998.1|9.290e-2146.0728S ribosomal protein S18c, mitochondrial-like pro... [more]
XP_003249593.12.698e-2045.35PREDICTED: 28S ribosomal protein S18c, mitochondri... [more]
gb|EEC11155.1|3.005e-2045.45ribosomal protein S18C, putative [Ixodes scapulari... [more]
EEB19349.12.435e-1741.18conserved hypothetical protein [Pediculus humanus ... [more]
AAN11068.19.952e-841.27mitochondrial ribosomal protein S18B, isoform B [D... [more]

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BLAST of EMLSAG00000010111 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|225718232|gb|ACO14962.1|1.375e-5385.5628S ribosomal protein S18c, mitochondrial precurso... [more]
gi|157120726|ref|XP_001659742.1|2.757e-2351.76AAEL001615-PA [Aedes aegypti] >gi|108883031|gb|EAT... [more]
gi|357613436|gb|EHJ68500.1|1.183e-2250.56mitochondrial 28S ribosomal protein S18c [Danaus p... [more]
gi|1000206780|gb|KXJ77613.1|1.301e-2249.41hypothetical protein RP20_CCG007047 [Aedes albopic... [more]
gi|1121143348|ref|XP_019558817.1|1.664e-2249.41PREDICTED: 28S ribosomal protein S18c, mitochondri... [more]
gi|1022769094|gb|KZS13605.1|1.703e-2247.0628S ribosomal protein S18c [Daphnia magna][more]
gi|1121152841|ref|XP_019563265.1|1.719e-2249.41PREDICTED: 28S ribosomal protein S18c, mitochondri... [more]
gi|557768305|ref|XP_005183832.1|2.044e-2252.33PREDICTED: 28S ribosomal protein S18c, mitochondri... [more]
gi|930651317|gb|KPI93660.1|3.940e-2250.5628S ribosomal protein S18c, mitochondrial, partial... [more]
gi|321466269|gb|EFX77265.1|5.065e-2249.41hypothetical protein DAPPUDRAFT_305829 [Daphnia pu... [more]

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BLAST of EMLSAG00000010111 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold41_size498431-snap-gene-1.152.173e-4267.42protein:Tk00190 transcript:maker-scaffold41_size49... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s668supercontigLSalAtl2s668:156455..162196 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s668-processed-gene-1.14
Biotypeprotein_coding
EvidenceIEA
Note28S ribosomal protein S18c, mitochondrial
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000010111 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000010111EMLSAT00000010111-705958Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s668:156455..162196-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000010111-692877 ID=EMLSAG00000010111-692877|Name=EMLSAG00000010111|organism=Lepeophtheirus salmonis|type=gene|length=5742bp|location=Sequence derived from alignment at LSalAtl2s668:156455..162196- (Lepeophtheirus salmonis)
ATGGGACTTTTACCTGGAGTACTCATTGGAACAACTCGTAGATTATGTAC
ATCCTCGATATTAATGGGAAATGCCCGCAAAGGCAAGCGATTACGTCGAT
CCAATCCCATAAAAGATGCTAGAATGAAATTAGGGCCCTCCTGGAAAGCG
GATCCCCTCGAAATGAAATCTCCTCTATTCAATACTCCTCATCCCGTTCA
AAGATTTACTTCTCAGAGCATATCTGTGTCAAATGAGGACGAAGTATAAT
TTATTTTTGTTTGTTACCTTACTATTTGTTATATTAACACTTAAATTGAG
GATCCGTTTGACCGTTGCTTATATATTGTCGATAGAGTGTTTTCACGTGA
CGTCAGCCAGCATTGTAGATGTCGGGCATTTTGAGAACCTAAATAACCAA
GTTTTACAAGAATGGAAGCCCTTTTTTCATTAATATTAAAGAAAAAATGA
ACTGTATTGGATGTCAAAATGGGACCAACAAATAAAAGGACTTACACCTT
ACTGTATTAAAAAATATATTCCTCTAATGTCTAGTTTAATGATAGATATG
ACTCTAAAATGTATTCAAAATATGTTATTACATCATTATACATTCTTATT
TCCATTTTGTAGCTACAAATTAACTATTACAATAGAAAGAATAAGATATT
TGTCTCTAATTATACTAGTTGTACTAAATGATCAAATCTATTTTCTTAAG
AGATTTTTCACTGTATCATAAATGGAGAAGGCCTCATCTTGGGGTCTCAA
AGTTGATATTTTTACTACATAAAATGGATTAATTTCCAATAAATCTTCAT
GAAACTCAATGAAATGGCTTTAAAAATATGAAAAGACTTAGCATCTGCCT
TGAATACTACTTGATAACCAATGATCAACACTGATATTTCAATATAATCA
AATTAATCTCTACTGAAGATACCTATGAAACGTCTAAATTTGAAGAAAAA
AAATATATATAGAGATTATGGACAGGAAAAGAATGTTCTATTGTTATGGT
TAGTTTGTATCTATAATATAGAAATCAGATTGTATGACAATATACATTTT
AGTATTATATAATGAATCTATGTATAAGAGGGATTTTTTTAATTCAGAGA
AAGTAAGGTTAAAGTTCTTCTATTTGCTAGTACCACTTTGAAAGACATTA
GTGCACCCTTTTTCTTTAATATTAATGAAAAAATAGTTTTTATCCATATA
GTACTTAGTATATTAGGTGCCTAAAATGGCCGAGATCAACAACGCTGACG
TCACGTGAAAACGCTTTATTCCCTATTGACTACCGATTCAAAGGTCTATT
GTCATTAATATTATACATTCACTAACCAATGAAGAGTTAATTATTAATCA
TCCGTGATTTGCACGTCTTTTTAAAACTTCTTATCTAGGAAGCTGAGTGT
ACGAACTGTCCTGCTAGGCCTGTCACGAGAACAAATTTTTTCTGTGCGAT
TCATTACCCCAGAAATTATTGCTATTAGCGATAATATTGCCGTGTTGACT
CCATTTCTAACTTATATAAAGATAATTGCATAGTAATGCAAGACATCCTT
AATCAATAAACTTTTATTTTTAAAGAACACTGGAACTGGATATCTGGAAG
ACATTAAATATACCCAGAATTAATTAACAAAACATCCAAAAACAATAAAT
AAAATTATTTTAACCAAAAATGCTCTTGAATAAAAACGAAAAACAAGAAA
TACAATTTAAACACTAAATAAAAAGGATGTAAACCAGATTGTATTTCAAC
AAATGATAAGTNNTTAGGCTCAGACATGCCAAATAGAACCTTTGTGCAAA
AAAAAAAAAGGTGGAAACTAAACAACAAAAAAAAAACATGACTGAAAGCA
AATCCCTCAATATGTCATATGCAAATATGTAGCTTCTTTAGTCTTGTAGA
TTCCGAGCATGAATACCAACACCAGATTAAAAACTTGATATCCAGTTACT
TGGAAGCGTGCGGATAGAATTGATTACAGCCGGCAAAAATTATCGCTCAT
TTTAATTTATGGCACCATTAATCGATTTATTGCATATCGCGACAGGCCTA
AGTCGTGCTCAAGAGTATTGTCACCTTCTTAGTTTATCTCTCTATAAAAC
TTAAGTTCTAGTTTAAATAGGAAAGCTCAGGCATGAATGTTATTCAATTC
GAAAATGTTTCTCATAGATAATTATAAGAATCTATTAATATTTTGATATA
TTAGGTACTTTTTGTAAATTGATGTGGAAAACATACCTTGCAAAATACGT
TTGTATTTTAATAAGGTTTGAGCCATAGACTTATTTAAAAAATGAGAAGG
CTGTTACTTCTTTCGGATATGATTAATTATTTAGATGAGAACATATTATA
TAGTTCTAAAAATATTTCTGCTTATAAAACGCTGAAATAAATAGTTACTC
TAATATTTCATCACCAAAAAGATTTTTTTTTACTAATTCTACCTACAATC
ACTACTGATGTTGTTAGTACCTTTATTCTGAACGATGATTGTTATCCGTA
CTGTCTTTACCACTTTCAAATTTTATCAATTGTATACAATTGCTATAAAC
CAGTGGTTCCTAATCGGAGCTCATTGAATCCCTTGGTCTCTACGGTGTAT
TGCCAAGGGATCTGTTAGAAATTACCTTAATATAACATTTGTTTGAACAT
ATTTGATATGCCGTAGGAATTAAAAATGTATGAAGTTCTCAAGTGTGATG
AAAAAGTTGGGGATCACTTCTCTAATATAACTAAACATTATATTTTTGGT
GAAATGTTACTTGAGTAGAGATTGCCATCTATTACTCTATCTAGAATTTT
TTATTATTAAATTATTATAAGATTTTTAACCGTTTAGCATCTAGTTGTTA
GCCCCCCCCCCCCCCCCCCCTGTACTGTAGCTTTTCCACAAGTTTAAAAT
TTGACACGTCTTAAATAAAAAATATTTGTCAAATCGTCTTATTGATATAC
GGAAGGAAATATCTATTGTTTCATAGTCCTCTGTAATTCTTTATGGGAGG
GATTCATTTCAGAGTATTTGGTGATGAATGATTTTATCATTCATATCAGT
ATTTAAATCAAAAAATTTATATATAAACATGATAATCATATACCGCAAGG
ATAATTCTTTTTTTTATCAATCTATGCATGTCCATTGTGTGCTATTCTCA
AGATTGTTTTATCTCAAATTTCCTGTATTTATTTTCTACTAGTAATTACA
TATATTTTGTTGTAGACTTTATATGAAATATTCAGAATTTGACGAGTTTT
AATTTCATCTATTGATTTAAATTTTATGTTACTTGATCGGTGAGTAATAT
TACTCATTGACCCAAACCATGTTTATCACCTTAGATTCAAATCCATTTAT
TAACAATTAAAGAATAAGTGGGTTCATTTTAACACAACAAGTCTTAATAT
ATCTGCTATTGTTTGAATCTATTTATAAGTTATTCTTTTAAAAAAATGAA
TATATATATATATATTATGACAGCTCGAGACTCGAGTTTGTCCATTTTCA
CAAAAAACACTAAAATGGCTGTAACCTAACAACTGCACGTTCCAAATGGC
TGAAACCTTAGTTAAGTAACTGTCAACAGATGCTAGGMAGATGATTCTAG
CTTTTATTTACGAGTCCCGCCATCTTCACATTGATGTCGAAAACTTTTCA
GTCGACCCTCGTTATTATACCGTTGTTATACGGTGATTGGCTTGAGCTTA
TATGCACATTAGTCCTTTTCAAATTTGACTTTCCTAAAACTTATGGAATC
TCATACTTTGTTACTTTGATATTGAGCTTTGGCTATGCTTCCCTCAAGAG
CTGATATCCAGCTTAATTATTAACGTTTGTCAAAAACACTGAATAATTCG
GGATATTATGTTTTCCACTTAGCTCCCCAGAGATTGATGCTATAGCATTT
TGAAAGCTGCAAAAAAATTATTTAAATTCTAACTAATACCTTTGAAATAA
TTTGGAGCGTTCTTGAAAAACGTCAACAATGAAACTCGACTTAAGACAAG
CATAGCTAAAGTCCAAAATCAAAGTAACTAGTTTATTTTGTTCATTTCGA
CCTTGTAAAATGGGAAACATATCAGTTTGAATATGTTTGATGAAAAATGT
TTAATGGGCATGCATTTCAAATTGATTATTGAATGGATATTTACGGGTAT
ATGGAATAATAATTAACACACACACACACACAGAAAAATAACATATTAAT
TTTTTATACTCTTTATATTTATAAATTTAATTTTAGCCTCTCGAATGTAT
CGATGATCCATATAAAAAGGAAAGCACAATGTGTATCCTTTGTCCTCGTC
GTTATGCCATCTCCATTCGTCCAGATTATAAGAATCCCAAGCTATTGGCT
CAGTTTATTTCTCCACATACTGGTTTGGTTTATAAATCTCATATTACAGG
ACTCTGTAAATCCATGCAAGATGAACTCGAAAATGAAGTTAAAAGAGCAC
AAGATTTAGGTTAGAACCATATCTTTTTTATCTATGAATTTTGAAAATGG
ACGTCATTTATATAAGTATATACAAATATAAGCATTGCTTAGTATATACA
GGTGTTTTAACCATTTAAACTCAGACAACAGATATCAAAAAATGATTGCA
AATGCTTTATTAGTTATAAGAAAAAATAAGTTGTGTATTTGTAAACAACC
ATGAGTTACAATAATAAGAAAATAAAAATAAATCTCAGGAGTAAGGATGT
CCGTATGTGGCTAAAATTTGACTAATACACTTTATTCCCCTCCTGACATG
AGTTGATTTCTTCAAATACCAATGGATAATATTAGGTATTTCCTTCTATA
TTATTGTAAAGTATCTTTTTTCGTAATTATTTACTCTCCTACAAGTTGTT
GGGTGCAAATTCAATTACATTCGTTTTTGAGTGGATCTGTTCTCAATTTC
CCATCCCTCAAAAATTTCAGACCCCTTAAAACGTACAACTTTAAAATATC
AATTAAATGAACTAAAGTACGAGCCAAGATATAAAGATTAGGGAATAAAG
TTTATTTTCGTAATGTATTTTTTGTATGATAATTACGAGACTCAACTATA
TTTTGAACCAAAATAAATCTTATCTTTTCTTGACGAAATGAATACGAGAC
TAAATGTGAGGAAACAAAAATAAATCAGCACTTAGATGCTCCTCACTTTA
GTGGCAAGGACAAATTTATACAAATATAACATGTCTTTTTACAAAATGGA
ACAGCTTCAAGAAGAATATAAAAATTTAAACCATTTGAATTCTTTAACAA
AACCCATTAACCTAGATTTAAATGATTTATTTTATATGCATGATGAGACA
ATTAGCAATGTATTGATGCGTTCATCATTGTTTGAGATTAATTCATTCAA
GAAGAAACCCCACAAAATATCAGATTTGAAGTAACTTTGTTTACTAGTAA
TAATGCAATTCTTCTTTTGCAGGTTATATGTCAACTCAGATGAAGGAAGT
GCATTATTTGAAAGATCCCGTTCTTGTTGACCCCACAAAGCCCATAAAGA
AGAATCCCTTCTAGTCCGATCATACATTTTATAGGCATACAAAATATATA
CTAGCATTTCAAATAATTATTGAGTGAATCATCAAGCTCCTGGAATTATG
TTCATCTAACTGACTTGGATCATCAAACATTCCTAATTGAATAAAATCGT
AGGGATATATTATGACTTTCTTTGTATTTCTTTATTTAAAGCAAATAATA
ACTATGGACAAATAGTCAATTTGATGATGGATTTGAAAGAAA
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