EMLSAG00000010124, EMLSAG00000010124-692890 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000010124
Unique NameEMLSAG00000010124-692890
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000010124 vs. GO
Match: - (symbol:CG4998 species:7227 "Drosophila melanogaster" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS] [GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS50240 SMART:SM00020 EMBL:AE014296 GO:GO:0006508 GO:GO:0016787 SUPFAM:SSF50494 eggNOG:COG5640 OrthoDB:EOG75B84T GeneTree:ENSGT00700000104508 RefSeq:NP_001036609.1 UniGene:Dm.13277 ProteinModelPortal:Q0E8E2 SMR:Q0E8E2 STRING:7227.FBpp0110166 PaxDb:Q0E8E2 PRIDE:Q0E8E2 EnsemblMetazoa:FBtr0110866 GeneID:39808 KEGG:dme:Dmel_CG4998 UCSC:CG4998-RB FlyBase:FBgn0036612 OMA:PLVNLHV PhylomeDB:Q0E8E2 GenomeRNAi:39808 NextBio:815487 Bgee:Q0E8E2 Uniprot:Q0E8E2)

HSP 1 Score: 48.1358 bits (113), Expect = 2.880e-6
Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 0 
Query:   29 GTAQLEDYPWHVFILKW--KEDVVKCEGAILTKHHVISAASCIK 70
            G ++  +YPWHV ILK   KE +  C G ++   H+ISAA CIK
Sbjct:  941 GDSEFGEYPWHVAILKKDPKESIYACGGTLIDAQHIISAAHCIK 984
[Close]
BLAST of EMLSAG00000010124 vs. C. finmarchicus
Match: gi|592939557|gb|GAXK01018996.1| (TSA: Calanus finmarchicus comp269371_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 8.806e-6
Identity = 25/84 (29.76%), Postives = 44/84 (52.38%), Query Frame = 0 
Query:    1 MNYFTKNVKCGTSN-HSF--KSCNQTTEGEKGTAQLEDYPWHVFILKWKE--DVVKCEGAILTKHHVISAASCIKEYEDEILVV 79
            +N F+   +CG  N H    +  N      +G  +  +YPW   +LK ++  +V  C G+++   H+++AA CIK+Y  E L +
Sbjct:  881 VNQFSTFGQCGKRNAHGVNGRINNPAQTYNEGDTEFGEYPWQAALLKKEQYDNVYVCGGSLIDASHILTAAHCIKQYRPEELRI 1132
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BLAST of EMLSAG00000010124 vs. C. finmarchicus
Match: gi|592875205|gb|GAXK01082372.1| (TSA: Calanus finmarchicus comp113809_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 1.282e-4
Identity = 22/48 (45.83%), Postives = 30/48 (62.50%), Query Frame = 0 
Query:   35 DYPWHVFILKWKE---DVVKCEGAILTKHHVISAASCIKE-YEDEILV 78
            +YPWHV +L   E   D V C GA++   HV++AA C+K  Y  E+LV
Sbjct:  271 EYPWHVGVLATVEGDTDYV-CGGALIDSQHVLTAAHCVKSFYAHELLV 411
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BLAST of EMLSAG00000010124 vs. C. finmarchicus
Match: gi|592926811|gb|GAXK01031645.1| (TSA: Calanus finmarchicus comp21316_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 37.7354 bits (86), Expect = 3.955e-4
Identity = 17/43 (39.53%), Postives = 26/43 (60.47%), Query Frame = 0 
Query:   31 AQLEDYPWHVFILKWKEDVVKCEGAILTKHHVISAASCIKEYE 73
            AQ+ ++PW V  L+   D   C G++L++  V+SAA C K  E
Sbjct:   10 AQVGEFPWAVLTLR--SDGSSCGGSLLSERFVLSAAHCHKNKE 132
[Close]
BLAST of EMLSAG00000010124 vs. C. finmarchicus
Match: gi|592916534|gb|GAXK01041841.1| (TSA: Calanus finmarchicus comp706359_c0_seq7 transcribed RNA sequence)

HSP 1 Score: 39.2762 bits (90), Expect = 4.341e-4
Identity = 20/72 (27.78%), Postives = 37/72 (51.39%), Query Frame = 0 
Query:    9 KCGTSNH---SFKSCNQTTEGEKGTAQLEDYPWHVFILKWKE--DVVKCEGAILTKHHVISAASCIKEYEDE 75
            +CG  N    + +  N     ++G  +  +YPW   +LK ++  +V  C G+++   H+++AA CIK    E
Sbjct:  432 QCGRRNAHGVTGRINNPAQTQDEGDTEFGEYPWQAALLKKEQYDNVYVCGGSLIDSSHLLTAAHCIKHLRPE 647
[Close]
BLAST of EMLSAG00000010124 vs. C. finmarchicus
Match: gi|592916536|gb|GAXK01041839.1| (TSA: Calanus finmarchicus comp706359_c0_seq5 transcribed RNA sequence)

HSP 1 Score: 39.2762 bits (90), Expect = 4.820e-4
Identity = 20/72 (27.78%), Postives = 37/72 (51.39%), Query Frame = 0 
Query:    9 KCGTSNH---SFKSCNQTTEGEKGTAQLEDYPWHVFILKWKE--DVVKCEGAILTKHHVISAASCIKEYEDE 75
            +CG  N    + +  N     ++G  +  +YPW   +LK ++  +V  C G+++   H+++AA CIK    E
Sbjct:  432 QCGRRNAHGVTGRINNPAQTQDEGDTEFGEYPWQAALLKKEQYDNVYVCGGSLIDSSHLLTAAHCIKHLRPE 647
[Close]
BLAST of EMLSAG00000010124 vs. C. finmarchicus
Match: gi|592916537|gb|GAXK01041838.1| (TSA: Calanus finmarchicus comp706359_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 39.2762 bits (90), Expect = 5.025e-4
Identity = 20/72 (27.78%), Postives = 37/72 (51.39%), Query Frame = 0 
Query:    9 KCGTSNH---SFKSCNQTTEGEKGTAQLEDYPWHVFILKWKE--DVVKCEGAILTKHHVISAASCIKEYEDE 75
            +CG  N    + +  N     ++G  +  +YPW   +LK ++  +V  C G+++   H+++AA CIK    E
Sbjct:  432 QCGRRNAHGVTGRINNPAQTQDEGDTEFGEYPWQAALLKKEQYDNVYVCGGSLIDSSHLLTAAHCIKHLRPE 647
[Close]
BLAST of EMLSAG00000010124 vs. C. finmarchicus
Match: gi|592916535|gb|GAXK01041840.1| (TSA: Calanus finmarchicus comp706359_c0_seq6 transcribed RNA sequence)

HSP 1 Score: 38.891 bits (89), Expect = 5.490e-4
Identity = 20/72 (27.78%), Postives = 37/72 (51.39%), Query Frame = 0 
Query:    9 KCGTSNH---SFKSCNQTTEGEKGTAQLEDYPWHVFILKWKE--DVVKCEGAILTKHHVISAASCIKEYEDE 75
            +CG  N    + +  N     ++G  +  +YPW   +LK ++  +V  C G+++   H+++AA CIK    E
Sbjct:  432 QCGRRNAHGVTGRINNPAQTQDEGDTEFGEYPWQAALLKKEQYDNVYVCGGSLIDSSHLLTAAHCIKHLRPE 647
[Close]
BLAST of EMLSAG00000010124 vs. C. finmarchicus
Match: gi|592916538|gb|GAXK01041837.1| (TSA: Calanus finmarchicus comp706359_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 38.891 bits (89), Expect = 6.089e-4
Identity = 20/72 (27.78%), Postives = 37/72 (51.39%), Query Frame = 0 
Query:    9 KCGTSNH---SFKSCNQTTEGEKGTAQLEDYPWHVFILKWKE--DVVKCEGAILTKHHVISAASCIKEYEDE 75
            +CG  N    + +  N     ++G  +  +YPW   +LK ++  +V  C G+++   H+++AA CIK    E
Sbjct:  432 QCGRRNAHGVTGRINNPAQTQDEGDTEFGEYPWQAALLKKEQYDNVYVCGGSLIDSSHLLTAAHCIKHLRPE 647
[Close]
BLAST of EMLSAG00000010124 vs. C. finmarchicus
Match: gi|592916540|gb|GAXK01041835.1| (TSA: Calanus finmarchicus comp706359_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 38.891 bits (89), Expect = 9.761e-4
Identity = 17/57 (29.82%), Postives = 31/57 (54.39%), Query Frame = 0 
Query:   21 NQTTEGEKGTAQLEDYPWHVFILKWKE--DVVKCEGAILTKHHVISAASCIKEYEDE 75
            N     ++G  +  +YPW   +LK ++  +V  C G+++   H+++AA CIK    E
Sbjct:  432 NPAQTQDEGDTEFGEYPWQAALLKKEQYDNVYVCGGSLIDSSHLLTAAHCIKHLRPE 602
[Close]
BLAST of EMLSAG00000010124 vs. C. finmarchicus
Match: gi|592885371|gb|GAXK01073004.1| (TSA: Calanus finmarchicus comp811858_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 37.3502 bits (85), Expect = 1.112e-3
Identity = 14/37 (37.84%), Postives = 23/37 (62.16%), Query Frame = 0 
Query:   32 QLEDYPWHVFILKWKEDVVKCEGAILTKHHVISAASC 68
            ++ +YPW V ++    DV  C G+IL+   +I+AA C
Sbjct:  315 EMNEYPWQVGLVSPGRDVPFCGGSILSSTTIITAAHC 425
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BLAST of EMLSAG00000010124 vs. L. salmonis peptides
Match: EMLSAP00000010124 (pep:novel supercontig:LSalAtl2s:LSalAtl2s6693:36311:37519:1 gene:EMLSAG00000010124 transcript:EMLSAT00000010124 description:"snap_masked-LSalAtl2s6693-processed-gene-0.1")

HSP 1 Score: 170.244 bits (430), Expect = 3.021e-56
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 
Query:    1 MNYFTKNVKCGTSNHSFKSCNQTTEGEKGTAQLEDYPWHVFILKWKEDVVKCEGAILTKHHVISAASCIKEYEDEILVVSR 81
            MNYFTKNVKCGTSNHSFKSCNQTTEGEKGTAQLEDYPWHVFILKWKEDVVKCEGAILTKHHVISAASCIKEYEDEILVVSR
Sbjct:    1 MNYFTKNVKCGTSNHSFKSCNQTTEGEKGTAQLEDYPWHVFILKWKEDVVKCEGAILTKHHVISAASCIKEYEDEILVVSR 81
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BLAST of EMLSAG00000010124 vs. L. salmonis peptides
Match: EMLSAP00000009899 (pep:novel supercontig:LSalAtl2s:LSalAtl2s645:169207:181410:1 gene:EMLSAG00000009899 transcript:EMLSAT00000009899 description:"maker-LSalAtl2s645-snap-gene-1.9")

HSP 1 Score: 68.5514 bits (166), Expect = 3.809e-15
Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 0 
Query:    8 VKCGTSNHSFKSCNQTTEGEKGTAQLEDYPWHV 40
            ++CGTSNH  +SCNQTTEGEKGTAQLEDYPWH+
Sbjct:  302 IQCGTSNHPSRSCNQTTEGEKGTAQLEDYPWHI 334
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BLAST of EMLSAG00000010124 vs. L. salmonis peptides
Match: EMLSAP00000007986 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4743:658:1503:-1 gene:EMLSAG00000007986 transcript:EMLSAT00000007986 description:"augustus-LSalAtl2s4743-processed-gene-0.0")

HSP 1 Score: 59.3066 bits (142), Expect = 1.309e-12
Identity = 26/71 (36.62%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:    9 KCGTSNHSFKSCNQTTEGEKGTAQLEDYPWHVFILKWKEDVVKCEGAILTKHHVISAASCIKEYEDEILVV 79
            +CG SN+   SCN+  +GE+G  + + +PWHVFI+   E    C G ILT + +++ A+C + Y  +++ V
Sbjct:   17 ECGVSNNITISCNKQXQGEEGDLENDAFPWHVFIVGRAEQEKLCNGIILTHNRLLTTANCAQYYHSKVIDV 87
[Close]
BLAST of EMLSAG00000010124 vs. L. salmonis peptides
Match: EMLSAP00000007567 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4371:5510:6792:-1 gene:EMLSAG00000007567 transcript:EMLSAT00000007567 description:"maker-LSalAtl2s4371-snap-gene-0.3")

HSP 1 Score: 50.8322 bits (120), Expect = 9.550e-10
Identity = 22/61 (36.07%), Postives = 38/61 (62.30%), Query Frame = 0 
Query:    9 KCGTSNHSFKSCNQTTEGEKGTAQLEDYPWHVFILKWKEDVVKCEGAILTKHHVISAASCI 69
            K G SN+  +SC  +  G    A+  D+PWHV++ +  +D + C+G +LT  HV+++A C+
Sbjct:    4 KNGKSNNVRQSCGSSKVGYLKKAKYGDHPWHVYVQEKNKDDLLCQGVLLTPIHVLTSAVCV 64
[Close]
BLAST of EMLSAG00000010124 vs. L. salmonis peptides
Match: EMLSAP00000000568 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1094:119279:122247:-1 gene:EMLSAG00000000568 transcript:EMLSAT00000000568 description:"snap-LSalAtl2s1094-processed-gene-1.29")

HSP 1 Score: 51.6026 bits (122), Expect = 2.091e-9
Identity = 25/63 (39.68%), Postives = 32/63 (50.79%), Query Frame = 0 
Query:   10 CGTSNHSFKSCNQTTEGEKGTAQLEDYPWHVFILKWKEDVVKCEGAILTKHHVISAASCIKEY 72
            CG SN    SC Q  EG +G      +PWHV I+  +   + C G ILT   VI+ A+C   Y
Sbjct:   66 CGVSNDLGHSCQQQAEGSEGYFDNAVFPWHVRIINRRNKQILCNGVILTNDRVITTANCKGYY 128
[Close]
BLAST of EMLSAG00000010124 vs. L. salmonis peptides
Match: EMLSAP00000004014 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2151:16886:18993:-1 gene:EMLSAG00000004014 transcript:EMLSAT00000004014 description:"snap-LSalAtl2s2151-processed-gene-0.9")

HSP 1 Score: 51.2174 bits (121), Expect = 3.099e-9
Identity = 25/63 (39.68%), Postives = 32/63 (50.79%), Query Frame = 0 
Query:   10 CGTSNHSFKSCNQTTEGEKGTAQLEDYPWHVFILKWKEDVVKCEGAILTKHHVISAASCIKEY 72
            CG SN    SCNQ  EG +G      +PWH  I+   +  V C G ILT   V++ A+C   Y
Sbjct:   65 CGVSNDLGNSCNQQKEGSEGRFDCAVFPWHARIVHRYKQEVLCNGVILTNDRVLTTANCQGHY 127
[Close]
BLAST of EMLSAG00000010124 vs. L. salmonis peptides
Match: EMLSAP00000005345 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2882:48158:49259:1 gene:EMLSAG00000005345 transcript:EMLSAT00000005345 description:"augustus-LSalAtl2s2882-processed-gene-0.0")

HSP 1 Score: 48.9062 bits (115), Expect = 1.570e-8
Identity = 23/63 (36.51%), Postives = 32/63 (50.79%), Query Frame = 0 
Query:   10 CGTSNHSFKSCNQTTEGEKGTAQLEDYPWHVFILKWKEDVVKCEGAILTKHHVISAASCIKEY 72
            CG SN    SCNQ  EG +G      +PWH  I+  +   V C G I++   V++ A+C   Y
Sbjct:   71 CGVSNDLGNSCNQQKEGSQGFFDNAVFPWHAHIVNRENQQVLCNGVIVSNDRVLTTANCKGYY 133
[Close]
BLAST of EMLSAG00000010124 vs. L. salmonis peptides
Match: EMLSAP00000008660 (pep:novel supercontig:LSalAtl2s:LSalAtl2s537:130430:177832:-1 gene:EMLSAG00000008660 transcript:EMLSAT00000008660 description:"maker-LSalAtl2s537-augustus-gene-2.26")

HSP 1 Score: 46.2098 bits (108), Expect = 3.206e-7
Identity = 27/71 (38.03%), Postives = 39/71 (54.93%), Query Frame = 0 
Query:    9 KCGTSNHSFKSCNQTTEGEKGTAQLEDYPWHVFILKWKEDVVKCEGAILTKHHVISAASCIKEYED-EILV 78
            KCGT N      N    G K   + E YPWH+ I+K  E++  C GA++T  HV++A  C + +   EIL+
Sbjct:  524 KCGTKN-----VNSRIVGGKEVEENE-YPWHIGIVKIGENLPFCGGALVTDRHVVTAGHCFQTFRKVEILL 588
[Close]
BLAST of EMLSAG00000010124 vs. L. salmonis peptides
Match: EMLSAP00000005963 (pep:novel supercontig:LSalAtl2s:LSalAtl2s321:818470:836551:1 gene:EMLSAG00000005963 transcript:EMLSAT00000005963 description:"maker-LSalAtl2s321-augustus-gene-8.27")

HSP 1 Score: 45.8246 bits (107), Expect = 4.527e-7
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 0 
Query:   25 EGEKGTAQLEDYPWHVFILKWKE--DVVKCEGAILTKHHVISAASCIKEYE-DEILV 78
            E + G  +  +YPW V ILK  E  +V  C G+++   HVI+AA CI+ Y  DEI++
Sbjct:  988 ERKSGETEFGEYPWQVAILKKDEFDNVYLCAGSLIDGSHVITAAHCIRGYNPDEIVL 1044
[Close]
BLAST of EMLSAG00000010124 vs. L. salmonis peptides
Match: EMLSAP00000004811 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2544:4253:5591:-1 gene:EMLSAG00000004811 transcript:EMLSAT00000004811 description:"snap-LSalAtl2s2544-processed-gene-0.4")

HSP 1 Score: 43.5134 bits (101), Expect = 6.328e-7
Identity = 22/70 (31.43%), Postives = 33/70 (47.14%), Query Frame = 0 
Query:   10 CGTSNHSFKSCNQTTEGEKGTAQLEDYPWHVFILKWKEDVVKCEGAILTKHHVISAASCIKEYEDEILVV 79
            CG SN    SC +  E  +G      +PWH  I+  +   V C G IL+   V++ A+C   Y    ++V
Sbjct:   20 CGVSNDLGNSCQRQKEASEGYFDNAVFPWHARIVNIQNAEVLCNGVILSDTRVLTTANCKGYYHRYPVIV 89
[Close]
BLAST of EMLSAG00000010124 vs. Select Arthropod Genomes
Match: AAF49484.2 (CG4998, isoform A [Drosophila melanogaster])

HSP 1 Score: 48.1358 bits (113), Expect = 2.798e-7
Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 0 
Query:   29 GTAQLEDYPWHVFILKW--KEDVVKCEGAILTKHHVISAASCIK 70
            G ++  +YPWHV ILK   KE +  C G ++   H+ISAA CIK
Sbjct:  647 GDSEFGEYPWHVAILKKDPKESIYACGGTLIDAQHIISAAHCIK 690
[Close]
BLAST of EMLSAG00000010124 vs. Select Arthropod Genomes
Match: ABI31256.1 (CG4998, isoform B [Drosophila melanogaster])

HSP 1 Score: 48.1358 bits (113), Expect = 2.824e-7
Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 0 
Query:   29 GTAQLEDYPWHVFILKW--KEDVVKCEGAILTKHHVISAASCIK 70
            G ++  +YPWHV ILK   KE +  C G ++   H+ISAA CIK
Sbjct:  941 GDSEFGEYPWHVAILKKDPKESIYACGGTLIDAQHIISAAHCIK 984
The following BLAST results are available for this feature:
BLAST of EMLSAG00000010124 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 1
Match NameE-valueIdentityDescription
-2.880e-647.73symbol:CG4998 species:7227 "Drosophila melanogaste... [more]
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BLAST of EMLSAG00000010124 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592939557|gb|GAXK01018996.1|8.806e-629.76TSA: Calanus finmarchicus comp269371_c0_seq1 trans... [more]
gi|592875205|gb|GAXK01082372.1|1.282e-445.83TSA: Calanus finmarchicus comp113809_c0_seq1 trans... [more]
gi|592926811|gb|GAXK01031645.1|3.955e-439.53TSA: Calanus finmarchicus comp21316_c0_seq1 transc... [more]
gi|592916534|gb|GAXK01041841.1|4.341e-427.78TSA: Calanus finmarchicus comp706359_c0_seq7 trans... [more]
gi|592916536|gb|GAXK01041839.1|4.820e-427.78TSA: Calanus finmarchicus comp706359_c0_seq5 trans... [more]
gi|592916537|gb|GAXK01041838.1|5.025e-427.78TSA: Calanus finmarchicus comp706359_c0_seq4 trans... [more]
gi|592916535|gb|GAXK01041840.1|5.490e-427.78TSA: Calanus finmarchicus comp706359_c0_seq6 trans... [more]
gi|592916538|gb|GAXK01041837.1|6.089e-427.78TSA: Calanus finmarchicus comp706359_c0_seq3 trans... [more]
gi|592916540|gb|GAXK01041835.1|9.761e-429.82TSA: Calanus finmarchicus comp706359_c0_seq1 trans... [more]
gi|592885371|gb|GAXK01073004.1|1.112e-337.84TSA: Calanus finmarchicus comp811858_c0_seq2 trans... [more]

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BLAST of EMLSAG00000010124 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 10
Match NameE-valueIdentityDescription
EMLSAP000000101243.021e-56100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s6693:3631... [more]
EMLSAP000000098993.809e-1581.82pep:novel supercontig:LSalAtl2s:LSalAtl2s645:16920... [more]
EMLSAP000000079861.309e-1236.62pep:novel supercontig:LSalAtl2s:LSalAtl2s4743:658:... [more]
EMLSAP000000075679.550e-1036.07pep:novel supercontig:LSalAtl2s:LSalAtl2s4371:5510... [more]
EMLSAP000000005682.091e-939.68pep:novel supercontig:LSalAtl2s:LSalAtl2s1094:1192... [more]
EMLSAP000000040143.099e-939.68pep:novel supercontig:LSalAtl2s:LSalAtl2s2151:1688... [more]
EMLSAP000000053451.570e-836.51pep:novel supercontig:LSalAtl2s:LSalAtl2s2882:4815... [more]
EMLSAP000000086603.206e-738.03pep:novel supercontig:LSalAtl2s:LSalAtl2s537:13043... [more]
EMLSAP000000059634.527e-742.11pep:novel supercontig:LSalAtl2s:LSalAtl2s321:81847... [more]
EMLSAP000000048116.328e-731.43pep:novel supercontig:LSalAtl2s:LSalAtl2s2544:4253... [more]
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BLAST of EMLSAG00000010124 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000010124 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 2
Match NameE-valueIdentityDescription
AAF49484.22.798e-747.73CG4998, isoform A [Drosophila melanogaster][more]
ABI31256.12.824e-747.73CG4998, isoform B [Drosophila melanogaster][more]
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BLAST of EMLSAG00000010124 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000010124 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s6693supercontigLSalAtl2s6693:36311..37519 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s6693-processed-gene-0.1
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000010124 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000010124EMLSAT00000010124-705971Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s6693:36311..37519+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000010124-692890 ID=EMLSAG00000010124-692890|Name=EMLSAG00000010124|organism=Lepeophtheirus salmonis|type=gene|length=1209bp|location=Sequence derived from alignment at LSalAtl2s6693:36311..37519+ (Lepeophtheirus salmonis)
ATGAACTATTTTACCAAAAATGTTAGTAAATTAAAAAAAAAACAATATTG
CAATATTTTTACCACCTTTGCGTTTTTTAGCAATTTATTTCAACTTATTG
GCATTTGCGACTGTAAATTTGTGAGTTGGGCACTCTCCCGTGTTTATTAC
CAATASCCCGCCAATATTCTTAATSCAGCCACAAATTATGGGCTACAACG
AATGGTTTGGAATTAATATATGTATCCATGAAACTATCAACAACTTGATA
AATGGCCAGATGATTGTTCTGGTCCCCTAAGAGTCAGCATTGGACCTGTT
GGTATTGTATTTTTTTTATTACTGCTTAGAGTTTACAAAAATAAGTACAA
TTAATAAAATGGTAGTTAAAAATTAACTTTGGTATTTTTTGGTCCACTTT
TAATCAAAAAGTGTCATTTTAAAGCTATAAGGTAGGCTCAATAATTTGCT
TTTGCAAACATATATTCTCCCTCCTCGCAAAGTATCAATTTTTTACTTCA
CTTCATATAAAATTTTGGAGGAACTATATTACACTAATATAATTAGAGCT
CCGTAGCTATATGACAACGTGGTCAGGAGAATTGGTACAAGAAATTATCA
TAGTTTCAATTGAATGGCCCGYAGTAGAAAATCAAATGAACTACAATTAA
ATAAAACCCCAAAATTACGAGCAAAAAGCTCTTTTTCTTTTTAAAAATCC
GGGCAGTCTTTSTTTTTGTCATCATTTGGGCATTTTCCCGAATCTTTCCA
TCGATTAATATATTTATTGTAGAATGAATGCAAAATTATACGGAGGAAGG
GGGGAAAATTAACTGAAATACCATCACTTTCACTAAACCTCTCTAAATAT
ATTTAAAAAAACTGTTATTCGGCRTACTTGTTTTGTTGGAACCTGCAACT
TTAAGATTTAATATTATTCAAATGCTGTTGTACATTTNNNNNNNNCCTTG
ATAAATTAGTTGATAAATCTTATATCTTTTGTAAACATCAGAATGTGGAA
CCTCCAACCATTCTTTTAAGTCTTGTAATCAAACTACAGAGGGAGAAAAA
GGAACTGCTCAATTGGAAGATTATCCCTGGCATGTATTCATTTTGAAATG
GAAGGAGGATGTTGTGAAGTGTGAAGGGGCCATACTGACAAAACATCATG
TCATCAGTGCAGCTAGCTGTATAAAAGAATATGAAGATGAAATACTAGTA
GTAAGTAGA
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