EMLSAG00000010249, EMLSAG00000010249-693015 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000010249
Unique NameEMLSAG00000010249-693015
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000010249 vs. GO
Match: - (symbol:TfIIFbeta "Transcription factor TFIIFbeta" species:7227 "Drosophila melanogaster" [GO:0060261 "positive regulation of transcription initiation from RNA polymerase II promoter" evidence=IDA] [GO:0032968 "positive regulation of transcription elongation from RNA polymerase II promoter" evidence=IDA] [GO:0001096 "TFIIF-class transcription factor binding" evidence=IPI] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA] [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0005674 "transcription factor TFIIF complex" evidence=ISS;IDA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=NAS] [GO:0004003 "ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR003196 InterPro:IPR011039 InterPro:IPR016640 Pfam:PF02270 PIRSF:PIRSF015849 EMBL:AE014297 GO:GO:0005524 GO:GO:0003677 GO:GO:0006200 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0032968 GO:GO:0008026 GO:GO:0060261 SUPFAM:SSF50916 GO:GO:0005674 eggNOG:COG5090 GeneTree:ENSGT00390000016051 KO:K03139 OMA:GKKARDD OrthoDB:EOG7WX094 PANTHER:PTHR10445 EMBL:U25188 EMBL:U02461 EMBL:AY071514 PIR:S57336 RefSeq:NP_524305.2 UniGene:Dm.20167 ProteinModelPortal:P41900 SMR:P41900 IntAct:P41900 STRING:7227.FBpp0081786 PaxDb:P41900 PRIDE:P41900 EnsemblMetazoa:FBtr0082310 GeneID:41290 KEGG:dme:Dmel_CG6538 CTD:41290 FlyBase:FBgn0010421 InParanoid:P41900 PhylomeDB:P41900 GenomeRNAi:41290 NextBio:823133 PRO:PR:P41900 Bgee:P41900 Uniprot:P41900)

HSP 1 Score: 187.578 bits (475), Expect = 2.810e-54
Identity = 109/254 (42.91%), Postives = 144/254 (56.69%), Query Frame = 0
Query:    7 TKISDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRL---------TSNSEGPD--RVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFR 224
            T+I DKDL   N  RGVWLVKVPK I  +WEKAP N +VGKLRI K P  K  VS SL   ++A    E          IP +H   VS V  QTLGVFS +         T+++  PD  ++ +EGR+V+K ECRPI+D  YM +K E+I KA EP R+   + + V +  P+ +   NIE+  RKK EGK                         K+LV+ T QPI++LKE+LK+VC+YN+KNPHKN+   +
Sbjct:    9 TQIIDKDLDLSNAGRGVWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQKAQVSLSLTPAVLALDPEEK---------IPTEHILDVSQVTKQTLGVFSHMAPSDGKENSTTSAAQPDNEKLYMEGRIVQKLECRPIADNCYMKLKLESIRKASEPQRRVQPIDKIVQNFKPVKDHAHNIEYRERKKAEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHKNMWELK 253          
BLAST of EMLSAG00000010249 vs. GO
Match: - (symbol:GTF2F2 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005674 "transcription factor TFIIF complex" evidence=IEA] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IEA] InterPro:IPR003196 InterPro:IPR011039 InterPro:IPR016640 Pfam:PF02270 PIRSF:PIRSF015849 GO:GO:0005524 GO:GO:0015630 GO:GO:0006200 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0008026 SUPFAM:SSF50916 GO:GO:0005674 GeneTree:ENSGT00390000016051 OrthoDB:EOG7WX094 TreeFam:TF314290 PANTHER:PTHR10445 EMBL:AADN03001368 Ensembl:ENSGALT00000027426 NextBio:20821979 PRO:PR:E1BXD0 Uniprot:E1BXD0)

HSP 1 Score: 149.058 bits (375), Expect = 4.265e-40
Identity = 89/239 (37.24%), Postives = 136/239 (56.90%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  G+WLVKVPK +  +W KA    EVGKLRI K  + +  VSF+L++++ +    + G K     A P++H F++ NV  QTL VF+  ++     D++SLEG VV++AECRP + + YM +KR  I ++ +P R   QL +AV  +  P++N   NIE+ ++KKE+GK                         K+LV  T+QP+ +LKE+L+E+  YN+K  HKN    +P
Sbjct:    8 DLTGVKQNTGMWLVKVPKYLSQQWSKASGRGEVGKLRIAKN-QGRTEVSFTLNEELASI--SDIGGKPAAVSA-PREHPFLLQNVGGQTLTVFTESST-----DKLSLEGIVVQRAECRPAASENYMKLKRFQIEESSKPVRLSQQLDKAVTTNYKPVANHQYNIEYEKKKKEDGKRARADKQQVLDMLFSAFEKHQYYNIKDLVDITKQPVIYLKEILREIGIYNVKGTHKNTWELKP 237          
BLAST of EMLSAG00000010249 vs. GO
Match: - (symbol:Gtf2f2 "RAP30" species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005674 "transcription factor TFIIF complex" evidence=IEA] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IEA] InterPro:IPR003196 InterPro:IPR011039 InterPro:IPR016640 Pfam:PF02270 PIRSF:PIRSF015849 RGD:620772 GO:GO:0005524 GO:GO:0015630 GO:GO:0006200 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0008026 EMBL:CH473951 SUPFAM:SSF50916 GO:GO:0005674 CTD:2963 GeneTree:ENSGT00390000016051 HOVERGEN:HBG001606 KO:K03139 OMA:GKKARDD OrthoDB:EOG7WX094 TreeFam:TF314290 PANTHER:PTHR10445 UniGene:Rn.11000 EMBL:AABR06084162 EMBL:AABR06084158 EMBL:AABR06084159 EMBL:AABR06084160 EMBL:AABR06084161 EMBL:AABR06084163 EMBL:BC091112 EMBL:D10665 PIR:S35491 RefSeq:NP_112304.2 Ensembl:ENSRNOT00000044254 GeneID:81674 KEGG:rno:81674 InParanoid:Q63489 NextBio:615272 Genevestigator:Q63489 Uniprot:Q63489)

HSP 1 Score: 147.902 bits (372), Expect = 1.139e-39
Identity = 91/239 (38.08%), Postives = 134/239 (56.07%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  GVWLVKVPK +  +W KAP   EVGKLRI K  + +  VSF+L++ +      + G K  +  A P++H F++ +V  QTL VF+  +S     D++SLEG VV++AECRP + + YM +KR  I ++ +P R   QL + V  +  P++N   NIE+ R+KKE+GK                         K+LV  T+QP+ +LKE+LKE+   N+K  HKN    +P
Sbjct:    8 DLTGAKQNTGVWLVKVPKYLSQQWAKAPGRGEVGKLRIAKN-QGRTEVSFTLNEDLANIH--DIGGKPASVSA-PREHPFVLQSVGGQTLTVFTESSS-----DKLSLEGIVVQRAECRPAASENYMKLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVGYLKEILKEIGIQNVKGIHKNTWELKP 237          
BLAST of EMLSAG00000010249 vs. GO
Match: - (symbol:GTF2F2 "General transcription factor IIF subunit 2" species:9913 "Bos taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005674 "transcription factor TFIIF complex" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IEA] InterPro:IPR003196 InterPro:IPR011039 InterPro:IPR016640 Pfam:PF02270 PIRSF:PIRSF015849 GO:GO:0005524 GO:GO:0015630 GO:GO:0006355 GO:GO:0003677 GO:GO:0006200 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0008026 SUPFAM:SSF50916 GO:GO:0005674 EMBL:BC111360 RefSeq:NP_001033153.1 UniGene:Bt.87914 ProteinModelPortal:Q2T9L9 SMR:Q2T9L9 STRING:9913.ENSBTAP00000045836 Ensembl:ENSBTAT00000048870 GeneID:509259 KEGG:bta:509259 CTD:2963 eggNOG:COG5090 GeneTree:ENSGT00390000016051 HOGENOM:HOG000294179 HOVERGEN:HBG001606 InParanoid:Q2T9L9 KO:K03139 OMA:GKKARDD OrthoDB:EOG7WX094 TreeFam:TF314290 NextBio:20868899 PANTHER:PTHR10445 Uniprot:Q2T9L9)

HSP 1 Score: 147.517 bits (371), Expect = 1.287e-39
Identity = 90/239 (37.66%), Postives = 136/239 (56.90%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  GVWLVKVPK +  +W KAP   EVGKLRI K  + +  VSF+L++ +      + G K  +  A P++H F++ +V  QTL VF+  +S     D++SLEG VV++AECRP +++ YM +KR  I ++ +P R   QL + V  +  P++N   NIE+ R+KKE+GK                         K+LV  T+QP+++LK++LKE+   N+K  HKN    +P
Sbjct:    8 DLTGAKQNTGVWLVKVPKYLSQQWAKAPGRGEVGKLRIAKN-QGRTEVSFTLNEDLANIH--DIGGKPASVSA-PREHPFVLQSVGGQTLTVFTESSS-----DKLSLEGIVVQRAECRPAANENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVSYLKDILKEIGVQNVKGIHKNTWELKP 237          
BLAST of EMLSAG00000010249 vs. GO
Match: - (symbol:Gtf2f2 "General transcription factor IIF subunit 2" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005674 "transcription factor TFIIF complex" evidence=IEA] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR003196 InterPro:IPR011039 InterPro:IPR016640 Pfam:PF02270 PIRSF:PIRSF015849 RGD:620772 GO:GO:0005524 GO:GO:0003677 GO:GO:0006200 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0008026 SUPFAM:SSF50916 GO:GO:0005674 eggNOG:COG5090 HOGENOM:HOG000294179 HOVERGEN:HBG001606 PANTHER:PTHR10445 EMBL:L01267 UniGene:Rn.11000 ProteinModelPortal:Q01750 SMR:Q01750 STRING:10116.ENSRNOP00000044668 PhosphoSite:Q01750 PRIDE:Q01750 UCSC:RGD:620772 InParanoid:Q01750 PRO:PR:Q01750 Genevestigator:Q01750 Uniprot:Q01750)

HSP 1 Score: 145.591 bits (366), Expect = 6.866e-39
Identity = 90/239 (37.66%), Postives = 133/239 (55.65%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  GVWLVKVPK +  +W KAP   EVGKLRI K  + +  VSF+L++ +      + G K  +  A P++H F++ +V  QTL VF+  +S     D++SLEG VV++AECRP + + YM +KR  I ++ +P R   Q  + V  +  P++N   NIE+ R+KKE+GK                         K+LV  T+QP+ +LKE+LKE+   N+K  HKN    +P
Sbjct:    8 DLTGAKQNTGVWLVKVPKYLSQQWAKAPGRGEVGKLRIAKN-QGRTEVSFTLNEDLANIH--DIGGKPASVSA-PREHPFVLQSVGGQTLTVFTESSS-----DKLSLEGIVVQRAECRPAASENYMKLKRLQIEESSKPVRLSQQADKVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVGYLKEILKEIGIQNVKGIHKNTWELKP 237          
BLAST of EMLSAG00000010249 vs. GO
Match: - (symbol:Gtf2f2 "general transcription factor IIF, polypeptide 2" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005674 "transcription factor TFIIF complex" evidence=IEA] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA] InterPro:IPR003196 InterPro:IPR011039 InterPro:IPR016640 Pfam:PF02270 PIRSF:PIRSF015849 RGD:620772 GO:GO:0005524 GO:GO:0003677 GO:GO:0006200 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0008026 SUPFAM:SSF50916 GO:GO:0005674 eggNOG:COG5090 HOGENOM:HOG000294179 HOVERGEN:HBG001606 PANTHER:PTHR10445 EMBL:L01267 UniGene:Rn.11000 ProteinModelPortal:Q01750 SMR:Q01750 STRING:10116.ENSRNOP00000044668 PhosphoSite:Q01750 PRIDE:Q01750 UCSC:RGD:620772 InParanoid:Q01750 PRO:PR:Q01750 Genevestigator:Q01750 Uniprot:Q01750)

HSP 1 Score: 145.591 bits (366), Expect = 6.866e-39
Identity = 90/239 (37.66%), Postives = 133/239 (55.65%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  GVWLVKVPK +  +W KAP   EVGKLRI K  + +  VSF+L++ +      + G K  +  A P++H F++ +V  QTL VF+  +S     D++SLEG VV++AECRP + + YM +KR  I ++ +P R   Q  + V  +  P++N   NIE+ R+KKE+GK                         K+LV  T+QP+ +LKE+LKE+   N+K  HKN    +P
Sbjct:    8 DLTGAKQNTGVWLVKVPKYLSQQWAKAPGRGEVGKLRIAKN-QGRTEVSFTLNEDLANIH--DIGGKPASVSA-PREHPFVLQSVGGQTLTVFTESSS-----DKLSLEGIVVQRAECRPAASENYMKLKRLQIEESSKPVRLSQQADKVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVGYLKEILKEIGIQNVKGIHKNTWELKP 237          
BLAST of EMLSAG00000010249 vs. GO
Match: - (symbol:gtf2f2a "general transcription factor IIF, polypeptide 2a" species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005674 "transcription factor TFIIF complex" evidence=IEA] InterPro:IPR003196 InterPro:IPR011039 InterPro:IPR016640 Pfam:PF02270 PIRSF:PIRSF015849 ZFIN:ZDB-GENE-040625-131 GO:GO:0005524 GO:GO:0006200 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0008026 SUPFAM:SSF50916 GO:GO:0005674 HOVERGEN:HBG001606 PANTHER:PTHR10445 EMBL:BC071444 UniGene:Dr.74541 ProteinModelPortal:Q6IQG2 SMR:Q6IQG2 STRING:7955.ENSDARP00000092894 PRIDE:Q6IQG2 InParanoid:Q6IQG2 NextBio:20818885 Bgee:Q6IQG2 Uniprot:Q6IQG2)

HSP 1 Score: 145.976 bits (367), Expect = 7.517e-39
Identity = 88/250 (35.20%), Postives = 134/250 (53.60%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSN-----------SEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  GVWLVKVPK +  +W KA    EVGKLRI K  + K  VSF+L++++      E+  + T+    P++H F +  V  QTL VF+  +S              GPD+++L G VV++AECRP   ++YM +K+  I +  +P R   QL +AV  +  P++N   N+++ +RKKEEGK                         K+LV  T+QP+ +LKE+L+++  YN+K  HKN    +P
Sbjct:    8 DLTGAKQNAGVWLVKVPKYLSQQWTKATGRGEVGKLRISKN-QGKAEVSFTLNEELTTI---ETIGEKTSMVRAPREHPFTLQTVGGQTLAVFTENSSGQSDAEASGSGTGSGPDKIALGGVVVQRAECRPAVSESYMRLKKLQIEELSKPLRFSQQLDKAVTTNYKPVANHAYNLDYEKRKKEEGKRARADKQQVLDMLFSAFEKHQFYNIKDLVDITKQPVIYLKEILRDIGIYNVKGTHKNTWELKP 253          
BLAST of EMLSAG00000010249 vs. GO
Match: - (symbol:GTF2F2 "General transcription factor IIF subunit 2" species:9606 "Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome" evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005674 "transcription factor TFIIF complex" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=TAS] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=TAS] [GO:0006368 "transcription elongation from RNA polymerase II promoter" evidence=TAS] [GO:0006370 "7-methylguanosine mRNA capping" evidence=TAS] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS] [GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016032 "viral process" evidence=TAS] [GO:0050434 "positive regulation of viral transcription" evidence=TAS] Reactome:REACT_71 InterPro:IPR003196 InterPro:IPR011039 InterPro:IPR016640 Pfam:PF02270 PIRSF:PIRSF015849 GO:GO:0005524 Reactome:REACT_116125 GO:GO:0016032 GO:GO:0005654 GO:GO:0015630 GO:GO:0006355 GO:GO:0003677 EMBL:CH471075 GO:GO:0006200 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006368 GO:GO:0006367 GO:GO:0000398 Reactome:REACT_1788 GO:GO:0008026 GO:GO:0006370 GO:GO:0050434 Reactome:REACT_1892 EMBL:AL138693 SUPFAM:SSF50916 GO:GO:0005674 PDB:1F3U PDBsum:1F3U CTD:2963 eggNOG:COG5090 HOGENOM:HOG000294179 HOVERGEN:HBG001606 KO:K03139 OMA:GKKARDD OrthoDB:EOG7WX094 TreeFam:TF314290 PANTHER:PTHR10445 EMBL:X16901 EMBL:X59745 EMBL:AK291545 EMBL:BT019525 EMBL:AL138963 EMBL:BC001771 PIR:S06141 PIR:S18677 RefSeq:NP_004119.1 UniGene:Hs.654582 PDB:1BBY PDB:2BBY PDBsum:1BBY PDBsum:2BBY ProteinModelPortal:P13984 SMR:P13984 BioGrid:109218 DIP:DIP-41680N IntAct:P13984 MINT:MINT-193667 STRING:9606.ENSP00000340823 PhosphoSite:P13984 DMDM:464519 PaxDb:P13984 PeptideAtlas:P13984 PRIDE:P13984 DNASU:2963 Ensembl:ENST00000340473 GeneID:2963 KEGG:hsa:2963 UCSC:uc001uzw.3 GeneCards:GC13P045694 HGNC:HGNC:4653 HPA:HPA006912 MIM:189969 neXtProt:NX_P13984 PharmGKB:PA29039 InParanoid:P13984 EvolutionaryTrace:P13984 GeneWiki:GTF2F2 GenomeRNAi:2963 NextBio:11746 PRO:PR:P13984 Bgee:P13984 CleanEx:HS_GTF2F2 Genevestigator:P13984 Uniprot:P13984)

HSP 1 Score: 144.821 bits (364), Expect = 1.178e-38
Identity = 90/239 (37.66%), Postives = 133/239 (55.65%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  GVWLVKVPK +  +W KA    EVGKLRI K  + +  VSF+L++ +    +   G K  +  A P++H F++ +V  QTL VF+  +S     D++SLEG VV++AECRP + + YM +KR  I ++ +P R   QL + V  +  P++N   NIE+ R+KKE+GK                         K+LV  T+QP+ +LKE+LKE+   N+K  HKN    +P
Sbjct:    8 DLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAK-TQGRTEVSFTLNEDLANIHD--IGGKPASVSA-PREHPFVLQSVGGQTLTVFTESSS-----DKLSLEGIVVQRAECRPAASENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVVYLKEILKEIGVQNVKGIHKNTWELKP 237          
BLAST of EMLSAG00000010249 vs. GO
Match: - (symbol:Gtf2f2 "general transcription factor IIF, polypeptide 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005674 "transcription factor TFIIF complex" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO] InterPro:IPR003196 InterPro:IPR011039 InterPro:IPR016640 Pfam:PF02270 PIRSF:PIRSF015849 MGI:MGI:1915955 GO:GO:0005524 GO:GO:0015630 GO:GO:0006355 GO:GO:0003677 GO:GO:0006200 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0008026 SUPFAM:SSF50916 GO:GO:0005674 CTD:2963 eggNOG:COG5090 GeneTree:ENSGT00390000016051 HOGENOM:HOG000294179 HOVERGEN:HBG001606 KO:K03139 OMA:GKKARDD OrthoDB:EOG7WX094 TreeFam:TF314290 PANTHER:PTHR10445 EMBL:BC027173 RefSeq:NP_081092.1 UniGene:Mm.20415 ProteinModelPortal:Q8R0A0 SMR:Q8R0A0 BioGrid:213003 IntAct:Q8R0A0 MINT:MINT-4136717 PhosphoSite:Q8R0A0 PaxDb:Q8R0A0 PRIDE:Q8R0A0 Ensembl:ENSMUST00000088922 GeneID:68705 KEGG:mmu:68705 UCSC:uc007urb.1 InParanoid:Q8R0A0 NextBio:327734 PRO:PR:Q8R0A0 ArrayExpress:Q8R0A0 Bgee:Q8R0A0 CleanEx:MM_GTF2F2 Genevestigator:Q8R0A0 Uniprot:Q8R0A0)

HSP 1 Score: 144.821 bits (364), Expect = 1.401e-38
Identity = 90/239 (37.66%), Postives = 133/239 (55.65%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  GVWLVKVPK +  +W KA    EVGKLRI K  + +  VSF+L++ +    +   G K  +  A P++H F++ +V  QTL VF+  +S     D++SLEG VV++AECRP + + YM +KR  I ++ +P R   QL + V  +  P++N   NIE+ R+KKE+GK                         K+LV  T+QP+ +LKE+LKE+   N+K  HKN    +P
Sbjct:    8 DLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKN-QGRTEVSFTLNEDLANIHD--IGGKPASVSA-PREHPFVLQSVGGQTLTVFTESSS-----DKLSLEGIVVQRAECRPAASENYMKLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVGYLKEILKEIGIQNVKGIHKNTWELKP 237          
BLAST of EMLSAG00000010249 vs. GO
Match: - (symbol:gtf2f2b "general transcription factor IIF, polypeptide 2b" species:7955 "Danio rerio" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005674 "transcription factor TFIIF complex" evidence=IEA] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003196 InterPro:IPR011039 InterPro:IPR016640 Pfam:PF02270 PIRSF:PIRSF015849 ZFIN:ZDB-GENE-050417-374 GO:GO:0005524 GO:GO:0006200 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0008026 SUPFAM:SSF50916 GO:GO:0005674 HOGENOM:HOG000294179 HOVERGEN:HBG001606 KO:K03139 PANTHER:PTHR10445 EMBL:BC092783 EMBL:BC165452 RefSeq:NP_001017832.1 UniGene:Dr.87723 ProteinModelPortal:Q568N8 GeneID:100148942 KEGG:dre:100148942 CTD:100148942 NextBio:20792568 Uniprot:Q568N8)

HSP 1 Score: 144.05 bits (362), Expect = 3.117e-38
Identity = 87/241 (36.10%), Postives = 136/241 (56.43%), Query Frame = 0
Query:   11 DKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            D DL    +  GVWLVKVPK +  +W KA    EVGKL+I K  + K  VSF+L++++       SG K ++ ++ P++H F +  V  QTL VF+      E  D+++LEG VV++AECRP   ++YM +K+  I ++ +P R   +L +A+  +  P+SN   N+E+ +RKKEEGK                         ++LV  T+QP+ +LKE+L+E+  YN + PHK+    +P
Sbjct:    7 DVDLTRAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLKIGK-AQGKTVVSFNLNEELTVV--DCSGEKISSVRS-PREHPFTMQTVGGQTLAVFT------ESSDKIALEGMVVQRAECRPAVSESYMKLKKLQIEESTKPLRFSQRLEKAITTNYKPVSNHSHNLEYEKRKKEEGKRARADKQKVLEMLFSAFEKHQFYNIRDLVDITKQPVIYLKEILREIGVYNSRGPHKSTWELKP 237          
BLAST of EMLSAG00000010249 vs. C. finmarchicus
Match: gi|592947096|gb|GAXK01011457.1| (TSA: Calanus finmarchicus comp23072_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 204.912 bits (520), Expect = 1.619e-60
Identity = 116/252 (46.03%), Postives = 153/252 (60.71%), Query Frame = 0
Query:   10 SDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGES-GSK------STTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSE---GPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHX-XPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            +D+DL   N  RGVWLVKVPK I DRWEKA  N EVGKLRI K   AKP V+F+L D + A   G S G K      S+T Q IPK+HKF VS++ AQTLGVFS    + E     D++S+EG+VV++AEC P +   Y ++K+EA+ KA EP R   QL + V     P++N  AN+ H R+KK EGK                         K+L +ETRQP+ +LK++LKEVCNY++K PH+N+   +P
Sbjct:  162 TDRDLDLANSVRGVWLVKVPKYISDRWEKAAANTEVGKLRIRKVNGAKPEVNFTLSDAVCAPLAGLSEGDKMDLVRNSSTYQQIPKEHKFRVSSIAAQTLGVFSHAAGDPEDTAAVDKLSVEGKVVQRAECCPNNSSLYSAIKKEALTKAGEPKRMVKQLDKHVTTSFKPVANHAANLAHERQKKAEGKKMRDDKDKVQEILFALFEKHQFYNIKDLAQETRQPMAYLKQILKEVCNYSVKPPHRNMWELKP 917          
BLAST of EMLSAG00000010249 vs. C. finmarchicus
Match: gi|592776305|gb|GAXK01178263.1| (TSA: Calanus finmarchicus comp14885_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 158.303 bits (399), Expect = 2.520e-44
Identity = 84/166 (50.60%), Postives = 109/166 (65.66%), Query Frame = 0
Query:  241 RLSEFDYKKIFLGRLKLGNKRHLPVHKSKLFKKFEGKPEL--NHPTTNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIYQGGEAQDPRFKLK 404
            RL   +YKK     ++LGNKR    HK   FK+F  KP    + P   YG R TGIRH+  WE++PE  PEL+VPDL +  LKPYVSY   ++ QEELT KDLFN +YG KI+ DF+S KL+ DG+SLEP+  E++T  +A V A++TGSDI+ GG+     F LK
Sbjct:  111 RLGNINYKK-----MELGNKRWSKQHKKMQFKRF-NKPNAFPDIPVFKYGTRDTGIRHDAFWEHVPEKVPELMVPDLKECDLKPYVSYATNDIYQEELTSKDLFNVIYGRKIIEDFRSGKLDTDGNSLEPNKLEELTPEQAEVLARQTGSDIFVGGDPYSKTFALK 590          
BLAST of EMLSAG00000010249 vs. C. finmarchicus
Match: gi|592790608|gb|GAXK01163960.1| (TSA: Calanus finmarchicus comp1042935_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 31.187 bits (69), Expect = 5.381e+0
Identity = 18/59 (30.51%), Postives = 30/59 (50.85%), Query Frame = 0
Query:  233 STSSVQHQRLSEFDYKKIFLGRLKLGNKRHLPVHKSKLFKKFEGKPELNHPTTNYGCRS 291
            ST  +QH  +  + Y++    +L+  N  H P+H  +   K + K   NHP T++  RS
Sbjct:  204 STGFIQHYLVQLYKYERQTQTKLEARNHTHTPLHYLQQLAKQDLKSCSNHPHTSFISRS 380          
BLAST of EMLSAG00000010249 vs. C. finmarchicus
Match: gi|592883194|gb|GAXK01075181.1| (TSA: Calanus finmarchicus comp5944765_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 7.570e+0
Identity = 18/52 (34.62%), Postives = 24/52 (46.15%), Query Frame = 0
Query:  186 GKKNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRPFIQKTYLSTSSV 237
            G KN V      +TH+K   K +C+Y L  P      F P I  T +  S+V
Sbjct:  257 GSKNAVVIIEWSLTHVKNFGKHICSYFLNFPEIKEKLFEPSILITVVVCSAV 412          
BLAST of EMLSAG00000010249 vs. C. finmarchicus
Match: gi|592785469|gb|GAXK01169099.1| (TSA: Calanus finmarchicus comp1934_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 8.695e+0
Identity = 15/37 (40.54%), Postives = 23/37 (62.16%), Query Frame = 0
Query:  116 DRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEP 152
            ++++ E R VK  EC  ++ K   +V  EAIL A+EP
Sbjct:  493 EKLAKELRAVKYVECSALTQKGLKNVFDEAILAALEP 603          
BLAST of EMLSAG00000010249 vs. L. salmonis peptides
Match: EMLSAP00000010249 (pep:novel supercontig:LSalAtl2s:LSalAtl2s67:717344:718924:-1 gene:EMLSAG00000010249 transcript:EMLSAT00000010249 description:"maker-LSalAtl2s67-augustus-gene-7.20")

HSP 1 Score: 816.994 bits (2109), Expect = 0.000e+0
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0
Query:    1 MSSNPPTKISDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGKKNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRPFIQKTYLSTSSVQHQRLSEFDYKKIFLGRLKLGNKRHLPVHKSKLFKKFEGKPELNHPTTNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIYQGGEAQDPRFKLKYKRF 408
            MSSNPPTKISDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGKKNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRPFIQKTYLSTSSVQHQRLSEFDYKKIFLGRLKLGNKRHLPVHKSKLFKKFEGKPELNHPTTNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIYQGGEAQDPRFKLKYKRF
Sbjct:    1 MSSNPPTKISDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGKKNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRPFIQKTYLSTSSVQHQRLSEFDYKKIFLGRLKLGNKRHLPVHKSKLFKKFEGKPELNHPTTNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIYQGGEAQDPRFKLKYKRF 408          
BLAST of EMLSAG00000010249 vs. SwissProt
Match: gi|1729817|sp|P41900.2|T2FB_DROME (RecName: Full=General transcription factor IIF subunit 2; AltName: Full=ATP-dependent helicase TfIIF-beta; AltName: Full=Transcription initiation factor IIF subunit beta; Short=TFIIF-beta)

HSP 1 Score: 187.578 bits (475), Expect = 1.456e-55
Identity = 109/254 (42.91%), Postives = 144/254 (56.69%), Query Frame = 0
Query:    7 TKISDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRL---------TSNSEGPD--RVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFR 224
            T+I DKDL   N  RGVWLVKVPK I  +WEKAP N +VGKLRI K P  K  VS SL   ++A    E          IP +H   VS V  QTLGVFS +         T+++  PD  ++ +EGR+V+K ECRPI+D  YM +K E+I KA EP R+   + + V +  P+ +   NIE+  RKK EGK                         K+LV+ T QPI++LKE+LK+VC+YN+KNPHKN+   +
Sbjct:    9 TQIIDKDLDLSNAGRGVWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQKAQVSLSLTPAVLALDPEEK---------IPTEHILDVSQVTKQTLGVFSHMAPSDGKENSTTSAAQPDNEKLYMEGRIVQKLECRPIADNCYMKLKLESIRKASEPQRRVQPIDKIVQNFKPVKDHAHNIEYRERKKAEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHKNMWELK 253          
BLAST of EMLSAG00000010249 vs. SwissProt
Match: gi|464520|sp|Q03123.1|T2FB_XENLA (RecName: Full=General transcription factor IIF subunit 2; AltName: Full=ATP-dependent helicase gtf2f2; AltName: Full=Transcription initiation factor IIF subunit beta; Short=TFIIF-beta; AltName: Full=Transcription initiation factor RAP30)

HSP 1 Score: 151.369 bits (381), Expect = 7.230e-42
Identity = 90/246 (36.59%), Postives = 142/246 (57.72%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSR-LTSNSEGP------DRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  G+WLVK+PK +  +W KA    EVGKLRIVK  + K  VSF+L++++ A  +   G  +++  + P++H F++ +V  QTL V +  L+  SE        D+++LEG VV +AECRP +   YM +KR+ I ++ +P RQ  QL +AV ++  P+SN   NIE+ ++KK++GK                         K+LV  T+QP+T+LKE+L+++  YN+K  HKN    +P
Sbjct:    9 DLNGAKQNTGMWLVKLPKYLAQQWAKATGRGEVGKLRIVKN-QGKTEVSFTLNEEL-ASIQDIGGKPASSLVSTPREHPFLLQSVGGQTLTVLTESLSGQSEDKSENRVIDKLALEGIVVHRAECRPAASDNYMQMKRKQIEESSKPKRQSQQLEKAVTSNYKPVSNHQYNIEYEKKKKDDGKRARVDKHQVLDMLFSAFEKHQYYNIKDLVDITKQPVTYLKEILRDIGIYNMKGTHKNTWELKP 252          
BLAST of EMLSAG00000010249 vs. SwissProt
Match: gi|118573901|sp|Q2T9L9.1|T2FB_BOVIN (RecName: Full=General transcription factor IIF subunit 2; AltName: Full=ATP-dependent helicase GTF2F2; AltName: Full=Transcription initiation factor IIF subunit beta; Short=TFIIF-beta)

HSP 1 Score: 147.517 bits (371), Expect = 1.230e-40
Identity = 90/239 (37.66%), Postives = 136/239 (56.90%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  GVWLVKVPK +  +W KAP   EVGKLRI K  + +  VSF+L++ +      + G K  +  A P++H F++ +V  QTL VF+  +S     D++SLEG VV++AECRP +++ YM +KR  I ++ +P R   QL + V  +  P++N   NIE+ R+KKE+GK                         K+LV  T+QP+++LK++LKE+   N+K  HKN    +P
Sbjct:    8 DLTGAKQNTGVWLVKVPKYLSQQWAKAPGRGEVGKLRIAKN-QGRTEVSFTLNEDLANIH--DIGGKPASVSA-PREHPFVLQSVGGQTLTVFTESSS-----DKLSLEGIVVQRAECRPAANENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVSYLKDILKEIGVQNVKGIHKNTWELKP 237          
BLAST of EMLSAG00000010249 vs. SwissProt
Match: gi|400922|sp|Q01750.1|T2FB_RAT (RecName: Full=General transcription factor IIF subunit 2; AltName: Full=ATP-dependent helicase GTF2F2; AltName: Full=Transcription initiation factor IIF subunit beta; Short=TFIIF-beta; AltName: Full=Transcription initiation factor RAP30)

HSP 1 Score: 145.591 bits (366), Expect = 6.880e-40
Identity = 90/239 (37.66%), Postives = 133/239 (55.65%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  GVWLVKVPK +  +W KAP   EVGKLRI K  + +  VSF+L++ +      + G K  +  A P++H F++ +V  QTL VF+  +S     D++SLEG VV++AECRP + + YM +KR  I ++ +P R   Q  + V  +  P++N   NIE+ R+KKE+GK                         K+LV  T+QP+ +LKE+LKE+   N+K  HKN    +P
Sbjct:    8 DLTGAKQNTGVWLVKVPKYLSQQWAKAPGRGEVGKLRIAKN-QGRTEVSFTLNEDLANIH--DIGGKPASVSA-PREHPFVLQSVGGQTLTVFTESSS-----DKLSLEGIVVQRAECRPAASENYMKLKRLQIEESSKPVRLSQQADKVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVGYLKEILKEIGIQNVKGIHKNTWELKP 237          
BLAST of EMLSAG00000010249 vs. SwissProt
Match: gi|464519|sp|P13984.2|T2FB_HUMAN (RecName: Full=General transcription factor IIF subunit 2; AltName: Full=ATP-dependent helicase GTF2F2; AltName: Full=General transcription factor IIF 30 kDa subunit; AltName: Full=Transcription initiation factor IIF subunit beta; Short=TFIIF-beta; AltName: Full=Transcription initiation factor RAP30)

HSP 1 Score: 144.821 bits (364), Expect = 1.200e-39
Identity = 90/239 (37.66%), Postives = 133/239 (55.65%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  GVWLVKVPK +  +W KA    EVGKLRI K  + +  VSF+L++ +    +   G K  +  A P++H F++ +V  QTL VF+  +S     D++SLEG VV++AECRP + + YM +KR  I ++ +P R   QL + V  +  P++N   NIE+ R+KKE+GK                         K+LV  T+QP+ +LKE+LKE+   N+K  HKN    +P
Sbjct:    8 DLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAK-TQGRTEVSFTLNEDLANIHD--IGGKPASVSA-PREHPFVLQSVGGQTLTVFTESSS-----DKLSLEGIVVQRAECRPAASENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVVYLKEILKEIGVQNVKGIHKNTWELKP 237          
BLAST of EMLSAG00000010249 vs. SwissProt
Match: gi|62901035|sp|Q8R0A0.1|T2FB_MOUSE (RecName: Full=General transcription factor IIF subunit 2; AltName: Full=ATP-dependent helicase GTF2F2; AltName: Full=Transcription initiation factor IIF subunit beta; Short=TFIIF-beta)

HSP 1 Score: 144.821 bits (364), Expect = 1.434e-39
Identity = 90/239 (37.66%), Postives = 133/239 (55.65%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAV-NHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL    +  GVWLVKVPK +  +W KA    EVGKLRI K  + +  VSF+L++ +    +   G K  +  A P++H F++ +V  QTL VF+  +S     D++SLEG VV++AECRP + + YM +KR  I ++ +P R   QL + V  +  P++N   NIE+ R+KKE+GK                         K+LV  T+QP+ +LKE+LKE+   N+K  HKN    +P
Sbjct:    8 DLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKN-QGRTEVSFTLNEDLANIHD--IGGKPASVSA-PREHPFVLQSVGGQTLTVFTESSS-----DKLSLEGIVVQRAECRPAASENYMKLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVGYLKEILKEIGIQNVKGIHKNTWELKP 237          
BLAST of EMLSAG00000010249 vs. SwissProt
Match: gi|121988765|sp|Q291A0.1|RM41_DROPS (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor)

HSP 1 Score: 122.865 bits (307), Expect = 2.368e-32
Identity = 61/109 (55.96%), Postives = 75/109 (68.81%), Query Frame = 0
Query:  283 PTTNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIY 391
            P    G R TGI  +  +  IPE  P+++VPDLTD KLKPYVSY+A  VVQ E T  DLFNAVY  KIV DFK+  L  DGS  EPS+ EK+T  EA++ A++TGSDI+
Sbjct:   58 PIDKRGVRDTGILVDGKFVEIPEKIPDIIVPDLTDCKLKPYVSYKAPEVVQSEFTSLDLFNAVYSKKIVEDFKAGSLQADGSPKEPSAEEKLTSSEAFLRARRTGSDIF 166          
BLAST of EMLSAG00000010249 vs. SwissProt
Match: gi|122063590|sp|Q7JZM8.1|RM41_DROME (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor)

HSP 1 Score: 118.627 bits (296), Expect = 1.128e-30
Identity = 59/104 (56.73%), Postives = 74/104 (71.15%), Query Frame = 0
Query:  288 GCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIY 391
            G R TGI  +  +  IPE  P+++VPDLT  KLKPYVSY+A +VVQ E T  DLFNAVY  KI+ DFK+ KL +DGS+ EPS  E++T  EA   A+KTGSDI+
Sbjct:   63 GVRDTGILVDGQYVEIPEKIPDIIVPDLTGCKLKPYVSYKAPDVVQSEFTSLDLFNAVYSQKIIEDFKAGKLQKDGSAKEPSVNEQLTPEEALQRARKTGSDIF 166          
BLAST of EMLSAG00000010249 vs. SwissProt
Match: gi|81882547|sp|Q5BJX1.1|RM41_RAT (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor)

HSP 1 Score: 63.5438 bits (153), Expect = 4.291e-11
Identity = 38/89 (42.70%), Postives = 46/89 (51.69%), Query Frame = 0
Query:  284 TTNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYE 372
            T + G + TG      +  I EM PE VVPDLT FKLKPYV+YRA   +   LT K LF       I  DFK      D ++LE   +E
Sbjct:   31 TKSRGAKKTGFYTNRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTPLTAKALFLETVAPAIEKDFKEGTF--DANNLEKYGFE 117          
BLAST of EMLSAG00000010249 vs. SwissProt
Match: gi|81880390|sp|Q9CQN7.1|RM41_MOUSE (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor)

HSP 1 Score: 62.7734 bits (151), Expect = 6.665e-11
Identity = 39/90 (43.33%), Postives = 48/90 (53.33%), Query Frame = 0
Query:  284 TTNYGCRSTGI-RHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYE 372
            T + G + TGI   +  +  I EM PE VVPDLT FKLKPYV+YRA   +   LT K LF       I  DFK      D ++LE   +E
Sbjct:   31 TKSRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTPLTAKALFQETVAPAIEKDFKEGTF--DANNLEKYGFE 118          
BLAST of EMLSAG00000010249 vs. Select Arthropod Genomes
Match: gb|EEC18406.1| (transcription initiation factor IIF, small subunit, putative [Ixodes scapularis])

HSP 1 Score: 193.356 bits (490), Expect = 2.381e-58
Identity = 102/244 (41.80%), Postives = 140/244 (57.38%), Query Frame = 0
Query:   11 DKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPD----RVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DK+L   N  RGVWLVKVPK I  RW KAP   E G+L+I K P  K  + F+L D+ +  ++       T    IPK+H+F++SN+  Q L VFS+     +G +    +V LEG VV+K ECRP+ D  YM +KR+ ILKA +P RQ  QL R V +  P+++   N+E  ++KK EGK                         K+L + TRQP+ +LKE+LKE+CNYN KNPHKN+   +P
Sbjct:    5 DKELDCTNAARGVWLVKVPKYIASRWNKAPPMSEAGRLKITKGPNGKTDIRFTLSDECVNMKD------VTEKSTIPKEHRFVISNISNQNLAVFSQNKVVEDGVEHSTGKVCLEGHVVQKGECRPMGDDRYMQLKRQTILKASQPVRQVKQLDRIVQNYKPVADHKHNLEFEQKKKAEGKKAREDKDKVLDMLFSAFEKHQYYNIKDLEKITRQPVPYLKEILKEICNYNAKNPHKNMWELKP 242          
BLAST of EMLSAG00000010249 vs. Select Arthropod Genomes
Match: gb|EFA03550.1| (General transcription factor IIF subunit 2-like Protein [Tribolium castaneum])

HSP 1 Score: 192.2 bits (487), Expect = 8.369e-58
Identity = 111/246 (45.12%), Postives = 146/246 (59.35%), Query Frame = 0
Query:   11 DKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKRE-GESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLT---SNSEGPD--RVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGKK-------------------------NLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            D+DL   N  RGVWLVKVPK + +RWEKAP + EVGKL+I K     P VS +L   I+   E GE        ++IPK H+  VS V  QTLGVFS +    +++  P+  ++ +EG++V+K ECRP +D  YM +K E+I KA  PTR+  QL R V    P+S+   NIE+  RKK EGKK                         +LV+ T+QPIT+LKE+LKEVCNYNLKNPHKN+   +P
Sbjct:    8 DRDLDLSNATRGVWLVKVPKYVANRWEKAPSDMEVGKLKITKN-GTPPQVSLTLSSAILNLNEPGE--------ESIPKDHRLDVSKVTQQTLGVFSHVIPTQTDAVVPETEKLYMEGKIVQKLECRPYADNCYMKLKLESIRKASLPTRKVKQLDRVVTSYKPVSDHKNNIEYMERKKAEGKKARDDKDAVLEMLFAAFEKHQYYNIRDLVKITKQPITYLKEILKEVCNYNLKNPHKNMWELKP 244          
BLAST of EMLSAG00000010249 vs. Select Arthropod Genomes
Match: AAF54548.1 (transcription factor TFIIFbeta [Drosophila melanogaster])

HSP 1 Score: 187.578 bits (475), Expect = 7.055e-56
Identity = 109/254 (42.91%), Postives = 144/254 (56.69%), Query Frame = 0
Query:    7 TKISDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRL---------TSNSEGPD--RVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFR 224
            T+I DKDL   N  RGVWLVKVPK I  +WEKAP N +VGKLRI K P  K  VS SL   ++A    E          IP +H   VS V  QTLGVFS +         T+++  PD  ++ +EGR+V+K ECRPI+D  YM +K E+I KA EP R+   + + V +  P+ +   NIE+  RKK EGK                         K+LV+ T QPI++LKE+LK+VC+YN+KNPHKN+   +
Sbjct:    9 TQIIDKDLDLSNAGRGVWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQKAQVSLSLTPAVLALDPEEK---------IPTEHILDVSQVTKQTLGVFSHMAPSDGKENSTTSAAQPDNEKLYMEGRIVQKLECRPIADNCYMKLKLESIRKASEPQRRVQPIDKIVQNFKPVKDHAHNIEYRERKKAEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHKNMWELK 253          
BLAST of EMLSAG00000010249 vs. Select Arthropod Genomes
Match: EAA04044.3 (AGAP007002-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 186.808 bits (473), Expect = 1.261e-55
Identity = 108/244 (44.26%), Postives = 142/244 (58.20%), Query Frame = 0
Query:   11 DKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSR-LTSNSEGP----DRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFR 224
            DK+L   N  RGVWLVKVPK I ++WEKAP N EVGKL+I K+   K  VS +L D +I     E          IP+ H+  VS V  QTLGVFS  +T+  + P    ++  +EGR+V+K ECRP +D  YM +K E+I KA +P RQ   L + V++  P+S+   NIE   RKK EGK                         K+LVR TRQPI++LKE+LKEVC+YN+KNPHKN+   +
Sbjct:   11 DKELDLSNAGRGVWLVKVPKYIANKWEKAPGNIEVGKLKISKQVGQKAQVSLTLSDAVINIDPAEE---------IPRDHRLDVSVVTKQTLGVFSHAVTTTRDDPVPECEKQYMEGRIVQKLECRPYADHCYMKMKLESIRKASQPARQVKSLEKIVHNYKPVSDHKHNIEDRERKKAEGKKSRDDKNAVLDMLFNAFEKHQYYNIKDLVRITRQPISYLKEILKEVCDYNMKNPHKNMWELK 245          
BLAST of EMLSAG00000010249 vs. Select Arthropod Genomes
Match: XP_623868.1 (PREDICTED: general transcription factor IIF subunit 2 [Apis mellifera])

HSP 1 Score: 182.185 bits (461), Expect = 7.191e-54
Identity = 107/257 (41.63%), Postives = 147/257 (57.20%), Query Frame = 0
Query:    1 MSSNPPTKISDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKRE-GESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEG------PDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEH----------ARRKKEE---------------GKKNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            MS+N     ++K+L   N  RGVWLVKVPK I ++WEKAP N EVGKL+I K P  K  VS  L + ++A +E GE        + IPKQH+  V+ V  Q LGVFS +T +S         +++ +EGR+V+K ECRP +D  YM +K ++I +A  P RQ  QL R V +  P+S+   NIE+           R  K+                  ++LV+ TRQPI +LKE+L EVCNYNLKNPH+N+   +P
Sbjct:    1 MSAN--VSHTEKELDLSNAGRGVWLVKVPKYIANKWEKAPGNIEVGKLKITKNPGQKAEVSLRLSEAVLALKEPGE--------EEIPKQHRLDVTTVTKQMLGVFSHVTPSSSSDSIVPETEKLYMEGRIVQKLECRPYADNCYMKLKLQSIKRASVPQRQVQQLDRVVQNFKPVSDHKHNIEYAEKKKAEGKKMRDDKDAVLDMLFAAFEKHQYYNIRDLVKITRQPIVYLKEILNEVCNYNLKNPHRNMWELKP 247          
BLAST of EMLSAG00000010249 vs. Select Arthropod Genomes
Match: EEB10947.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 173.326 bits (438), Expect = 4.457e-51
Identity = 101/222 (45.50%), Postives = 134/222 (60.36%), Query Frame = 0
Query:   10 SDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKRE-GESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLT-SNSEG----PDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGKKNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            SDK+L T N +RGVWLVKVPK +  +WEKA  N EVGKL+I K+P  K  V  SL + ++  +E GE        + IPK H+  V  V   TLGVFS    SN EG     +++++EGR+V+K ECRP +D TYM +K E I KA  P RQ  QL RA +    + N         + +    ++LV+ T QPI +LKE+L EVCNYN+KNPHKN+   +P
Sbjct:    5 SDKELDTTNVERGVWLVKVPKYVATKWEKASGNIEVGKLKICKQPGQKMQVELSLSEAVLNLKEPGE--------ENIPKDHRLDVLPVKHLTLGVFSHTAPSNLEGVIPESEKLAMEGRIVQKLECRPYADNTYMKLKLETIRKASLPVRQVKQLDRARDDKEAVLNML--FAAFEKHQYYNIRDLVKITNQPIVYLKEILNEVCNYNIKNPHKNMWELKP 216          
BLAST of EMLSAG00000010249 vs. Select Arthropod Genomes
Match: gb|KPM08152.1| (general transcription factor IIF subunit 2-like protein [Sarcoptes scabiei])

HSP 1 Score: 164.851 bits (416), Expect = 1.428e-47
Identity = 91/245 (37.14%), Postives = 139/245 (56.73%), Query Frame = 0
Query:   13 DLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKII-------AKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DL  +N  RGVWLVKVPK I  RW+      E+G+L I K P+ +  V F+L +++I       + +   S S +T    IP +H F +S++  QTL +FS+  +N     ++++EG+VV+K ECRPI ++ YM +K+E I  A +PT+   ++ RA+N+  PI+     IE+  ++K E K                         K+L R T+QP+ +LKE+LKE+CNYN KNPHKN+   +P
Sbjct:    2 DLDCQNASRGVWLVKVPKYISQRWQIQKPMTEIGQLNITKNPKGQMEVLFNLSEQVIKADLTADSSQTTASASDATNITTIPTEHIFAISDIQHQTLAIFSQDENN-----KLAIEGQVVQKGECRPIGNEIYMRLKKETIKMASQPTKVVQKIDRAINNFKPIN---VQIENDIKRKNETKKMRDDKETVQNILFAAFEKHQYYNIKDLERITKQPVPYLKEILKEICNYNSKNPHKNMWELKP 238          
BLAST of EMLSAG00000010249 vs. Select Arthropod Genomes
Match: EFX75711.1 (hypothetical protein DAPPUDRAFT_306632 [Daphnia pulex])

HSP 1 Score: 164.851 bits (416), Expect = 2.727e-47
Identity = 95/248 (38.31%), Postives = 141/248 (56.85%), Query Frame = 0
Query:    9 ISDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKRE-GESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTS--NSEGP---DRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEH--------ARRKKEEGK-----------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            + +K++   +  RGVWLVKVPK I  RW+K P N   G+L I +    K  V   L + I+  +E GE        + IPK+H  IVS++ +QTLGVFS+ T+   +  P   +++  EG+V +K ECRP ++ +YM +KR++++KA +PTR   QL R V    PIS+   N E          + + ++GK                 K+LV+ T QP+T+LKE+LK+VC YNLKNPHKN+   +P
Sbjct:   22 VYEKEMEMSSASRGVWLVKVPKYISSRWDKCPGNITAGQLNITRVQGQKSQVKLILSEAIMCLQEKGE--------EPIPKEHGLIVSHITSQTLGVFSQQTTPATTNSPMETEKIIFEGKVAQKLECRPTANASYMKLKRDSLIKAAQPTRIVKQLDRVVQSYKPISDHKHNKEFDEKKKAEGKKARDDKGKVMDMLFAAFEKHQYYNIKDLVKLTNQPVTYLKEILKDVCVYNLKNPHKNMWELKP 261          
BLAST of EMLSAG00000010249 vs. Select Arthropod Genomes
Match: EEB14225.1 (mitochondrial 50S ribosomal protein L41, putative [Pediculus humanus corporis])

HSP 1 Score: 137.502 bits (345), Expect = 3.411e-38
Identity = 71/137 (51.82%), Postives = 92/137 (67.15%), Query Frame = 0
Query:  259 NKRHLPVHK---SKLF-KKFEGKPELNHPTTNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIY 391
            N R  P++    S  F KK +  P  N P   YG R  G      + ++PEM PE++VPDLTDF LKPYVSYR+ +++Q E T KDLF+A+Y  KI NDF   KL+EDG+SLEP++YEKMT  EA + AK+TGSDI+
Sbjct:   29 NFRQFPLYNFRGSMAFRKKQQENPHPNIPIYKYGVREPGYTINNKFHFVPEMIPEIIVPDLTDFTLKPYVSYRSSDIMQTEFTAKDLFDAIYSEKIQNDFYKGKLDEDGNSLEPNNYEKMTEEEAELLAKQTGSDIF 165          
BLAST of EMLSAG00000010249 vs. Select Arthropod Genomes
Match: gb|EFA02474.1| (39S ribosomal protein L41, mitochondrial-like Protein [Tribolium castaneum])

HSP 1 Score: 129.028 bits (323), Expect = 4.673e-35
Identity = 68/137 (49.64%), Postives = 86/137 (62.77%), Query Frame = 0
Query:  259 NKRHLPVHK---SKLFKKFEGKPELNHPTTNYGCRSTGIRHEIG-WEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIY 391
            N R  P++    SK+FK+    P  + P    G R  G   + G +  +PE  PEL+VPDL DF LKPYVSYR  +V+Q E T +DLFN VY  KI  DFK  KLNEDG+ LEPS  E+MT  EA + A++TGSDI+
Sbjct:   23 NFRKFPIYNKRGSKIFKEMRKDPNYDLPHDKRGLRDVGYYADDGTFVLVPEKIPELIVPDLKDFPLKPYVSYRTPDVMQSEFTAEDLFNVVYAPKIAKDFKEGKLNEDGTPLEPSPEERMTPEEARIKAEQTGSDIF 159          
BLAST of EMLSAG00000010249 vs. nr
Match: gi|225712034|gb|ACO11863.1| (39S ribosomal protein L41, mitochondrial precursor [Lepeophtheirus salmonis])

HSP 1 Score: 391.734 bits (1005), Expect = 1.951e-134
Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0
Query:  221 MAFRPFIQKTYLSTSSVQHQRLSEFDYKKIFLGRLKLGNKRHLPVHKSKLFKKFEGKPELNHPTTNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIYQGGEAQDPRFKLKYKRF 408
            MAFRPFIQKTYLSTSSVQHQR SEFDYKKIFLGRLKLGNKRHLP+HKSKLFKKFEGKPELNHPTTNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIYQGGEAQDPRFKLKYKRF
Sbjct:    1 MAFRPFIQKTYLSTSSVQHQRSSEFDYKKIFLGRLKLGNKRHLPIHKSKLFKKFEGKPELNHPTTNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIYQGGEAQDPRFKLKYKRF 188          
BLAST of EMLSAG00000010249 vs. nr
Match: gi|225717456|gb|ACO14574.1| (Transcription initiation factor IIF subunit beta [Caligus clemensi])

HSP 1 Score: 375.941 bits (964), Expect = 6.809e-127
Identity = 194/249 (77.91%), Postives = 202/249 (81.12%), Query Frame = 0
Query:    3 SNPPTKISDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSN-SEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            S PP KISDKDLFTENRKRGVWLVKVPK I DRWEKAP+NE VGKLRIVKR RAKP VSFSLDDKI+AKREG   SK++TNQAIPKQHKFIVSNVMAQTLGVFSRLTS+ SEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQ  QL RAVNH  PISN  ANIEHARRKKEEGK                         K+LVRETRQPITHLKEVLK VCNYNLKNPHKN+   +P
Sbjct:    2 SAPPAKISDKDLFTENRKRGVWLVKVPKYISDRWEKAPDNEVVGKLRIVKRARAKPDVSFSLDDKIVAKREGTPESKTSTNQAIPKQHKFIVSNVMAQTLGVFSRLTSSASEGPDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQTVQLDRAVNHYKPISNHAANIEHARRKKEEGKKSRDDKEKVMERLFALFEKHQYYNIKDLVRETRQPITHLKEVLKGVCNYNLKNPHKNMWELKP 250          
BLAST of EMLSAG00000010249 vs. nr
Match: gi|1058158560|gb|JAS82928.1| (hypothetical protein g.6303 [Homalodisca liturata] >gi|1058171948|gb|JAS89622.1| hypothetical protein g.6304 [Homalodisca liturata])

HSP 1 Score: 206.068 bits (523), Expect = 1.480e-60
Identity = 115/248 (46.37%), Postives = 149/248 (60.08%), Query Frame = 0
Query:   10 SDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKRE-GESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTS--NSEG----PDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            +D+DL   N  RGVWLVKVPK I +RWEKAP N EVGKL+I K P  K  VS SL + ++  +E GE          IPK H+  VS V  QTLGVFS  +   NS+      +++ LEGR+V+K ECRP +D  YM +K+E+I KA+ PTR   QL R V +  P+S+   NIE+  RKK EGK                         K+LV++TRQP+ +LKE+LKEVCNYN+KNPHKN+   +P
Sbjct:    8 ADRDLDLSNSTRGVWLVKVPKYIANRWEKAPGNIEVGKLKITKNPGQKAQVSLSLSESVLCLKEPGEEN--------IPKDHRLDVSMVTKQTLGVFSHYSPMPNSDAIVPESEKMCLEGRIVQKLECRPYADSCYMKLKQESIRKAMIPTRSVQQLDRIVQNYKPVSDHKHNIEYEERKKTEGKKARDDKDVVLEMLFAAFEKHQYYNIKDLVKKTRQPVVYLKEILKEVCNYNIKNPHKNMWELKP 247          
BLAST of EMLSAG00000010249 vs. nr
Match: gi|1058254466|gb|JAT30718.1| (hypothetical protein g.11325 [Graphocephala atropunctata])

HSP 1 Score: 204.912 bits (520), Expect = 4.767e-60
Identity = 114/248 (45.97%), Postives = 151/248 (60.89%), Query Frame = 0
Query:   10 SDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKRE-GESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTS--NSEG----PDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            +D+DL   N  RGVWLVKVPK I +RWEKAP N EVGKL+I K P  K  VS SL + ++  +E GE        + IPK+H+  VS V  QTLGVFS  +   NS+      +++ LEGR+V+K ECRP +D  YM +K+E+I KA+ PTR   QL + V +  P+S+   NIE+  RKK EGK                         K+LV++TRQP+ +LKE+LKEVCNYN+KNPHKN+   +P
Sbjct:    8 ADRDLDLSNSTRGVWLVKVPKYIANRWEKAPGNIEVGKLKISKSPGQKAQVSLSLSESVLCLKEPGE--------ENIPKEHRLDVSMVTKQTLGVFSHYSPVPNSDAIVPESEKMCLEGRIVQKLECRPYADSCYMKLKQESIRKAMIPTRSVQQLDKIVQNYKPVSDHKHNIEYEERKKTEGKKARDDKDVVLEMLFAAFEKHQYYNIKDLVKKTRQPVVYLKEILKEVCNYNIKNPHKNMWELKP 247          
BLAST of EMLSAG00000010249 vs. nr
Match: gi|1058011344|gb|JAS09356.1| (hypothetical protein g.11972 [Clastoptera arizonana])

HSP 1 Score: 203.756 bits (517), Expect = 1.546e-59
Identity = 116/248 (46.77%), Postives = 147/248 (59.27%), Query Frame = 0
Query:   11 DKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKRE-GESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPD-------RVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            DKDL   N  RGVWLVKVPK + +RW+KAP N EVGKL+I K P  K  +S SL + I+  +E GE        + IPK H+   S V  QTLGVFS  T  S  PD       ++SLEG++V+K ECRP +D  YM +K E+I KA  PTR+  QL R V +  P+S+   NIE+  RKK EGK                         K+LV++TRQP+ +LKE+LKEVCNYNLKNPHKN+   +P
Sbjct:    9 DKDLDLSNANRGVWLVKVPKYVANRWDKAPGNIEVGKLKIAKTPGQKAQISLSLSESIMCLKEPGE--------ENIPKDHRLDASVVTRQTLGVFSHYTP-SLNPDAIVPESEKLSLEGKIVQKLECRPYADSCYMKLKLESIRKASVPTRKVQQLDRVVQNYKPVSDHKHNIEYEERKKSEGKKARDDKEVVLEMLFAAFEKHQYYNIKDLVKKTRQPVVYLKEILKEVCNYNLKNPHKNMWELKP 247          
BLAST of EMLSAG00000010249 vs. nr
Match: gi|1133430856|ref|XP_019871423.1| (PREDICTED: general transcription factor IIF subunit 2-like [Aethina tumida])

HSP 1 Score: 202.216 bits (513), Expect = 4.345e-59
Identity = 113/244 (46.31%), Postives = 147/244 (60.25%), Query Frame = 0
Query:   11 DKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGP----DRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            D  L   N KRGVWLVKVPK +  RWEKAP N EVGKLRIVK    K  VS +L D I+  +  E+G +S     IP+ H   VS V  QTLGVFS  T++S+ P    +++ +EG++V+K ECRP +D TYM++K++ I +A  PTRQ  QL R V    P+SN   NIE+  RKK EGK                         K+LV+ T QP+T+LK++LKEVCNYN+ NPHKN+   +P
Sbjct:    8 DHVLDLANGKRGVWLVKVPKYVASRWEKAPGNIEVGKLRIVKPQGQKAQVSLTLSDNIM--KMNEAGEES-----IPRDHTLNVSTVTQQTLGVFSHSTASSDLPQSSTEKLYMEGKIVQKLECRPHADNTYMALKKQCIKEASIPTRQVVQLDRIVQTYKPVSNHKNNIEYMERKKAEGKKSREDKDAVMERLFAAFEKHQYYNIKDLVKLTNQPVTYLKQILKEVCNYNMTNPHKNMWELKP 244          
BLAST of EMLSAG00000010249 vs. nr
Match: gi|939250933|ref|XP_014245049.1| (PREDICTED: general transcription factor IIF subunit 2-like [Cimex lectularius])

HSP 1 Score: 201.83 bits (512), Expect = 7.766e-59
Identity = 120/258 (46.51%), Postives = 149/258 (57.75%), Query Frame = 0
Query:    1 MSSNPPTKISDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKII-AKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTSNSEGPDRV-------SLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            MSSN   K +D DL   N  RGVWLVKVPK I +RWEKAP N EVGKL+I +    +  VS SL D ++  K+ GE        Q IPK H+  VS V  QTLGVFS      + PD V       SLEG++V+K ECRP +D  YM +K E+I KA  PTRQ  QL + V +  P+S+   NIE+  RKK EGK                         K+LV +T+QP+ +LKE+LKEVCNYNLKNPHKN+   +P
Sbjct:    1 MSSN--HKHTDCDLDLLNSGRGVWLVKVPKYISNRWEKAPGNVEVGKLKISRHSGHRSQVSLSLSDAVLNLKQPGE--------QPIPKDHRLDVSLVTRQTLGVFSHYNPKGKDPDSVIPDNEKLSLEGKIVQKLECRPYADNCYMKLKLESIRKASVPTRQVKQLDKVVQNFKPVSDHKHNIEYEERKKSEGKKARDDKEVVLEMIFAAFEKHQYYNIKDLVTKTKQPVVYLKEILKEVCNYNLKNPHKNMWELKP 248          
BLAST of EMLSAG00000010249 vs. nr
Match: gi|1130216311|ref|XP_019756112.1| (PREDICTED: general transcription factor IIF subunit 2 [Dendroctonus ponderosae] >gi|332376103|gb|AEE63192.1| unknown [Dendroctonus ponderosae] >gi|478259673|gb|ENN79517.1| hypothetical protein YQE_03980, partial [Dendroctonus ponderosae] >gi|546682944|gb|ERL92823.1| hypothetical protein D910_10131 [Dendroctonus ponderosae])

HSP 1 Score: 201.445 bits (511), Expect = 1.150e-58
Identity = 115/246 (46.75%), Postives = 148/246 (60.16%), Query Frame = 0
Query:   11 DKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKRE-GESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLT---SNSEGPD--RVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            D+DL   N  RGVWLVKVPK + +RWEKAP   EVGKL+I K+   KP VS +L   I+   E GE        ++IPK H+  VS V  QTLGVFS +    S+S  P+  ++ +EG++V+K ECRP +D  YM +K E+I KA  PTR+  QL R V+   P+S+   NIE+  RKK EGK                         K+LV+ TRQPIT+LKE+LKEVCNYNLKNPHKN+   +P
Sbjct:    8 DRDLDLSNANRGVWLVKVPKYVANRWEKAPNEMEVGKLKITKQQGQKPQVSLTLSPAILNLNEPGE--------ESIPKDHRLDVSTVTQQTLGVFSHVIPEKSDSVVPETEKLHMEGKIVQKLECRPYADTCYMKLKLESIRKASLPTRKVKQLDRVVHSYKPVSDHKNNIEYMERKKAEGKKARDDKDSVLEMLFSAFEKHQYYNIKDLVKITRQPITYLKEILKEVCNYNLKNPHKNMWELKP 245          
BLAST of EMLSAG00000010249 vs. nr
Match: gi|1058104015|gb|JAS55657.1| (hypothetical protein g.15940, partial [Cuerna arida])

HSP 1 Score: 200.675 bits (509), Expect = 1.799e-58
Identity = 113/248 (45.56%), Postives = 147/248 (59.27%), Query Frame = 0
Query:   10 SDKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKRE-GESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLTS--NSEG----PDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            +D+DL   N  RGVWLVKVPK I +RWEKAP   EVGKL+I K    K  VS SL + ++  +E GE          IPK H+  VS V  QTLGVFS  +   NS+      +++ LEGR+V+K ECRP +D  YM +K+E+I KA+ PTR   QL R V +  P+S+   NIE+  RKK EGK                         K+LV++TRQP+ +LKE+LKEVCNYN+KNPHKN+   +P
Sbjct:    8 ADRDLDLSNATRGVWLVKVPKYIANRWEKAPGTIEVGKLKITKNQGQKAQVSLSLSESVLCLKEPGEEN--------IPKDHRLDVSMVTKQTLGVFSHYSPIPNSDAIVPESEKMCLEGRIVQKLECRPYADSCYMKLKQESIRKAMIPTRSVQQLDRIVQNYKPVSDHKHNIEYEERKKTEGKKARDDKDVVLEMLFAAFEKHQYYNIKDLVKKTRQPVVYLKEILKEVCNYNIKNPHKNMWELKP 247          
BLAST of EMLSAG00000010249 vs. nr
Match: gi|1069797493|ref|XP_018323445.1| (PREDICTED: general transcription factor IIF subunit 2 [Agrilus planipennis])

HSP 1 Score: 198.749 bits (504), Expect = 1.512e-57
Identity = 111/245 (45.31%), Postives = 149/245 (60.82%), Query Frame = 0
Query:   11 DKDLFTENRKRGVWLVKVPKXIXDRWEKAPENEEVGKLRIVKRPRAKPXVSFSLDDKIIAKREGESGSKSTTNQAIPKQHKFIVSNVMAQTLGVFSRLT-SNSEG----PDRVSLEGRVVKKAECRPISDKTYMSVKREAILKAIEPTRQXXQLXRAVNHXXPISNXXANIEHARRKKEEGK-------------------------KNLVRETRQPITHLKEVLKEVCNYNLKNPHKNIMAFRP 225
            D+DL   N  RGVWLVKVPK I +RWEKAP + EVGKL+I K P  K  VS +L   ++     E+G ++     IPK H+  VS V  QTLGVFS +T +N++      +++ +EGR+V+K ECRP +D  YM +K ++I KA  PTR+  QL + V +  P+S+   NIE+  RKK EGK                         K+LV+ T+QPIT+LKE+LKEVCNYNLKNPHKN+   +P
Sbjct:    9 DRDLDLSNANRGVWLVKVPKYIANRWEKAPGDIEVGKLKITKTPGQKAQVSLTLSPAVL--NLNENGEEN-----IPKDHRLDVSTVTQQTLGVFSHMTPTNTDAVVPESEKLFMEGRIVQKLECRPYADNCYMKLKLDSIRKASVPTRKVKQLDKIVQNYKPVSDHKHNIEYQERKKAEGKKARDDKDAVLEMLFAAFEKHQYYNIKDLVKITKQPITYLKEILKEVCNYNLKNPHKNMWELKP 246          
BLAST of EMLSAG00000010249 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold521_size146803-processed-gene-0.1 (protein:Tk12188 transcript:snap_masked-scaffold521_size146803-processed-gene-0.1-mRNA-1 annotation:"39s ribosomal protein mitochondrial precursor")

HSP 1 Score: 165.622 bits (418), Expect = 1.423e-49
Identity = 82/169 (48.52%), Postives = 114/169 (67.46%), Query Frame = 0
Query:  240 QRLSEFDYKKIFLGRLKLGNKRHLPVHKSKLFKKFEGK-PELNHPT-TNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIYQGGEAQDPRFKLKYK 406
            +R SE    K+   R+ L NKRH P  K  +F  FE +   ++H    +YG R TG+RH   WE++PE  P+L+VPDLTD +LKPYVSYR K + QEE T KDLFNAVYG KI++DFK+ +LN+ G  L+PS  EKMT  +A V A++TGSDI+ GG  +  ++ ++++
Sbjct:   31 ERESEKVANKVHFKRIVLFNKRHHPHQKRDIFPPFEARRKAMDHAKRYSYGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIFLGGTPRSKKWNIRWE 199          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000010249 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-2.810e-5442.91symbol:TfIIFbeta "Transcription factor TFIIFbeta" ... [more]
-4.265e-4037.24symbol:GTF2F2 "Uncharacterized protein" species:90... [more]
-1.139e-3938.08symbol:Gtf2f2 "RAP30" species:10116 "Rattus norveg... [more]
-1.287e-3937.66symbol:GTF2F2 "General transcription factor IIF su... [more]
-6.866e-3937.66symbol:Gtf2f2 "General transcription factor IIF su... [more]
-6.866e-3937.66symbol:Gtf2f2 "general transcription factor IIF, p... [more]
-7.517e-3935.20symbol:gtf2f2a "general transcription factor IIF, ... [more]
-1.178e-3837.66symbol:GTF2F2 "General transcription factor IIF su... [more]
-1.401e-3837.66symbol:Gtf2f2 "general transcription factor IIF, p... [more]
-3.117e-3836.10symbol:gtf2f2b "general transcription factor IIF, ... [more]

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BLAST of EMLSAG00000010249 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 5
Match NameE-valueIdentityDescription
gi|592947096|gb|GAXK01011457.1|1.619e-6046.03TSA: Calanus finmarchicus comp23072_c0_seq1 transc... [more]
gi|592776305|gb|GAXK01178263.1|2.520e-4450.60TSA: Calanus finmarchicus comp14885_c0_seq1 transc... [more]
gi|592790608|gb|GAXK01163960.1|5.381e+030.51TSA: Calanus finmarchicus comp1042935_c0_seq4 tran... [more]
gi|592883194|gb|GAXK01075181.1|7.570e+034.62TSA: Calanus finmarchicus comp5944765_c0_seq1 tran... [more]
gi|592785469|gb|GAXK01169099.1|8.695e+040.54TSA: Calanus finmarchicus comp1934_c0_seq1 transcr... [more]
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BLAST of EMLSAG00000010249 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000102490.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s67:717344... [more]
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BLAST of EMLSAG00000010249 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
gi|1729817|sp|P41900.2|T2FB_DROME1.456e-5542.91RecName: Full=General transcription factor IIF sub... [more]
gi|464520|sp|Q03123.1|T2FB_XENLA7.230e-4236.59RecName: Full=General transcription factor IIF sub... [more]
gi|118573901|sp|Q2T9L9.1|T2FB_BOVIN1.230e-4037.66RecName: Full=General transcription factor IIF sub... [more]
gi|400922|sp|Q01750.1|T2FB_RAT6.880e-4037.66RecName: Full=General transcription factor IIF sub... [more]
gi|464519|sp|P13984.2|T2FB_HUMAN1.200e-3937.66RecName: Full=General transcription factor IIF sub... [more]
gi|62901035|sp|Q8R0A0.1|T2FB_MOUSE1.434e-3937.66RecName: Full=General transcription factor IIF sub... [more]
gi|121988765|sp|Q291A0.1|RM41_DROPS2.368e-3255.96RecName: Full=39S ribosomal protein L41, mitochond... [more]
gi|122063590|sp|Q7JZM8.1|RM41_DROME1.128e-3056.73RecName: Full=39S ribosomal protein L41, mitochond... [more]
gi|81882547|sp|Q5BJX1.1|RM41_RAT4.291e-1142.70RecName: Full=39S ribosomal protein L41, mitochond... [more]
gi|81880390|sp|Q9CQN7.1|RM41_MOUSE6.665e-1143.33RecName: Full=39S ribosomal protein L41, mitochond... [more]

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BLAST of EMLSAG00000010249 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 19
Match NameE-valueIdentityDescription
gb|EEC18406.1|2.381e-5841.80transcription initiation factor IIF, small subunit... [more]
gb|EFA03550.1|8.369e-5845.12General transcription factor IIF subunit 2-like Pr... [more]
AAF54548.17.055e-5642.91transcription factor TFIIFbeta [Drosophila melanog... [more]
EAA04044.31.261e-5544.26AGAP007002-PA [Anopheles gambiae str. PEST][more]
XP_623868.17.191e-5441.63PREDICTED: general transcription factor IIF subuni... [more]
EEB10947.14.457e-5145.50conserved hypothetical protein [Pediculus humanus ... [more]
gb|KPM08152.1|1.428e-4737.14general transcription factor IIF subunit 2-like pr... [more]
EFX75711.12.727e-4738.31hypothetical protein DAPPUDRAFT_306632 [Daphnia pu... [more]
EEB14225.13.411e-3851.82mitochondrial 50S ribosomal protein L41, putative ... [more]
gb|EFA02474.1|4.673e-3549.6439S ribosomal protein L41, mitochondrial-like Prot... [more]

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BLAST of EMLSAG00000010249 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|225712034|gb|ACO11863.1|1.951e-13498.9439S ribosomal protein L41, mitochondrial precursor... [more]
gi|225717456|gb|ACO14574.1|6.809e-12777.91Transcription initiation factor IIF subunit beta [... [more]
gi|1058158560|gb|JAS82928.1|1.480e-6046.37hypothetical protein g.6303 [Homalodisca liturata]... [more]
gi|1058254466|gb|JAT30718.1|4.767e-6045.97hypothetical protein g.11325 [Graphocephala atropu... [more]
gi|1058011344|gb|JAS09356.1|1.546e-5946.77hypothetical protein g.11972 [Clastoptera arizonan... [more]
gi|1133430856|ref|XP_019871423.1|4.345e-5946.31PREDICTED: general transcription factor IIF subuni... [more]
gi|939250933|ref|XP_014245049.1|7.766e-5946.51PREDICTED: general transcription factor IIF subuni... [more]
gi|1130216311|ref|XP_019756112.1|1.150e-5846.75PREDICTED: general transcription factor IIF subuni... [more]
gi|1058104015|gb|JAS55657.1|1.799e-5845.56hypothetical protein g.15940, partial [Cuerna arid... [more]
gi|1069797493|ref|XP_018323445.1|1.512e-5745.31PREDICTED: general transcription factor IIF subuni... [more]

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BLAST of EMLSAG00000010249 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
snap_masked-scaffold521_size146803-processed-gene-0.11.423e-4948.52protein:Tk12188 transcript:snap_masked-scaffold521... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s67supercontigLSalAtl2s67:717344..718924 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s67-augustus-gene-7.20
Biotypeprotein_coding
EvidenceIEA
Note39S ribosomal protein L41, mitochondrial precursor [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000010249 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000010249EMLSAT00000010249-706096Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s67:717344..718924-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000010249-693015 ID=EMLSAG00000010249-693015|Name=EMLSAG00000010249|organism=Lepeophtheirus salmonis|type=gene|length=1581bp|location=Sequence derived from alignment at LSalAtl2s67:717344..718924- (Lepeophtheirus salmonis)
ATGTCTTCAAATCCTCCAACTAAAATATCTGACAAGGATCTATTTACTGA GAATCGTAAAAGAGGAGTATGGCTCGTCAAAGTTCCAAAAWACATARCTG ATCGATGGGAAAAGGCCCCTGAAAATGAGGAAGTTGGAAAATTGAGGATT GTGAAGCGTCCTCGAGCAAAACCCGMTGTTTCATTCAGTTTGGACGATAA AATCATCGCAAAGAGGGAAGGAGAGAGTGGCTCCAAGTCAACTACGAATC AAGCCATTCCGAAGCAACATAAGTTTATTGTCTCTAATGTGATGGCACAA ACACTTGGAGTTTTTTCCCGGCTCACCTCCAATTCAGGTCAGATAATATT TAATCATCATTCRTTAACWTCGWAWAATGTATTAACATATGATATTTCCA TTTGCAGAGGGCCCTGACCGCGTATCCCTTGAAGGCCGTGTTGTGAAAAA GGCGGAATGTCGTCCAATATCAGATAAAACCTACATGAGTGTGAAGAGAG AAGCAATTCTTAAGGCCATTGAGCCTACCAGACAGMCTGYCCAACTTGMC CGTGCTGTCAACCATNAWAAMCCMATATCWAAYCAKSCAGCCAATATCGA ACACGCMCGTCGCAAAAAGGAAGAGGGCAAAAAGAGTAGGGNACGATAAA GAAAAAGTCATGGAGAGACTTTTTGCTCTATTCGAAAAGCATCAATATTA CAATATTAAAGATCTTGTTAGAGAAACTCGTCAGCCCATTACACATCTTA AAGAAGTCCTGAAAGAAGTCTGTAATTATAATCTTAAGAATCCACATAAA AATATGTGGGAATTAAAGCCTGAATATAGACATTACAAAGTGGATGAAGA AAAACAGAAGAAGGGAGATGATTCTTCTTCTGATGATGAATAAATCTGAA ATATATTAATTATTAATACTATTATTATTTATCAGAAACTTCCTTGTTCT TCTATATTATTACATTATATACTTAATAAATTATATTAAGTCGTTTTATT TATTTTATTATAGCATGGCTTTCCGCCCCTTCATTCAAAAGACTTATTTA TCAACTTCCTCTGTACAACACCAGCGTTTGAGTGAATTCGATTACAAGAA AATCTTCTTAGGAAGGCTTAAACTCGGAAATAAACGTCATTTGCCCGTAC ACAAAAGTAAACTCTTCAAGAAATTCGAGGGCAAGCCTGAACTTAATCAC CCCACAACGAACTACGGTTGTAGGAGTACTGGAATTCGTCACGAAATTGG TTGGGAATATATTCCTGAAATGAGGCCAGAACTCGTAGTACCTGACTTGA CGGATTTCAAGCTTAAACCCTATGTTTCATACCGTGCTAAGAATGTTGTT CAAGAAGAGCTCACTCCCAAAGATTTATTTAACGCCGTATATGGTAGCAA AATTGTAAATGACTTTAAATCGGACAAGTTAAATGAGGACGGAAGTTCAC TTGAACCAAGTTCATACGAAAAAATGACTATTCATGAAGCATATGTTGCT GCCAAAAAGACTGGTTCAGATATATATCAAGGAGGAGAGGCTCAGGATCC GCGGTTTAAGCTAAAGTATAAGAGATTCTAG
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