EMLSAG00000010484, EMLSAG00000010484-693250 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000010484
Unique NameEMLSAG00000010484-693250
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000010484 vs. GO
Match: - (symbol:PRSS8 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0010765 "positive regulation of sodium ion transport" evidence=IEA] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0005886 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 OrthoDB:EOG75B84T GO:GO:0010765 TreeFam:TF351676 GeneTree:ENSGT00730000110445 EMBL:DAAA02057919 Ensembl:ENSBTAT00000037413 OMA:YASWIHY Uniprot:F1MUB9)

HSP 1 Score: 45.8246 bits (107), Expect = 1.642e-4
Identity = 44/203 (21.67%), Postives = 78/203 (38.42%), Query Frame = 0
Query:    3 AALALLWTFLFRKSMGACECGHPNQRIPMDGDFNSDSSPVLSNESIPWHVLIRHESTNAQCSGVIVSRRYVLTDSTCFSIDETVQVYG--------DYTEIDFSASTKGKVTK--------NLEGVQIVQLEEELKFNQNLMSACLPEDPTNVYNEELGIVTYLFNQELLYKDFVPVLW-HMFPNITFSHEDKYKRPGSPLVT 188
            A   +L   LFR  +GA      +  +   G     ++  L     PW V I H  T+  C G +VS ++VL+ + CF  D  ++ Y         DY   D       +V          ++  + ++QL   + F++ +   CLP    +  N    +VT                W H+ P+++  H    ++   PL++
Sbjct:   14 AVATVLLLGLFRNGIGAVAAEADSCGMVPQGRITGGTTAALGQ--WPWQVSINHHGTHV-CGGSLVSDQWVLSAAHCFPSDNKIEEYEVKLGAHQLDYFSTDTQVRGVAQVISHEKYSHEGSMGDIALLQLSSSVTFSRYIRPICLPAANASFPNGLQCVVTG---------------WGHVAPSVSLQHPRPLQQLEVPLIS 198          
BLAST of EMLSAG00000010484 vs. GO
Match: - (symbol:CG8213 species:7227 "Drosophila melanogaster" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS] [GO:0006508 "proteolysis" evidence=IEA;NAS] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 EMBL:AE013599 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 OrthoDB:EOG75B84T GeneTree:ENSGT00740000115218 RefSeq:NP_001137622.1 UniGene:Dm.537 ProteinModelPortal:B7YZU2 SMR:B7YZU2 MEROPS:S01.B34 PaxDb:B7YZU2 EnsemblMetazoa:FBtr0273385 GeneID:35902 KEGG:dme:Dmel_CG8213 FlyBase:FBgn0033359 OMA:APQTSEF PhylomeDB:B7YZU2 GenomeRNAi:35902 NextBio:795734 Bgee:B7YZU2 Uniprot:B7YZU2)

HSP 1 Score: 45.8246 bits (107), Expect = 2.300e-4
Identity = 29/109 (26.61%), Postives = 55/109 (50.46%), Query Frame = 0
Query:   49 PWHVLIRHES-----TNAQCSGVIVSRRYVLTDSTCFS--IDETVQVYGDYTEIDFSASTKGKVTKNLEGV---------------QIVQLEEELKFNQNLMSACLPED 135
            PW VL+R  +     T  +C GV+++ RYV+T + C    +   V V G++ +I     +K  VTKN++ V                +++L+  ++F+ +++  C+P D
Sbjct: 1461 PWQVLVRESTWLGLFTKNKCGGVLITSRYVITAAHCQPGFLASLVAVMGEF-DISGDLESKRSVTKNVKRVIVHRQYDPATFENDLALLELDSPVQFDTHIVPICMPND 1568          
BLAST of EMLSAG00000010484 vs. C. finmarchicus
Match: gi|592816469|gb|GAXK01138099.1| (TSA: Calanus finmarchicus comp103359_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 51.6026 bits (122), Expect = 7.880e-7
Identity = 40/159 (25.16%), Postives = 70/159 (44.03%), Query Frame = 0
Query:   11 FLFRKSMGACECGHPNQRIPMDGDFNSDSSPVLSNESIPWHVLIRHESTNAQCSGVIVSRRYVLTDSTCF---------SIDETVQVYGDYTEIDFSASTKGKVTK------------NLEGVQIVQLEEELKFNQNLMSACLPEDPTNVYNEELGIVT 148
             +  +++  CEC        + G    + SP      +P+ VL +  S    C G I+++RY++T + C          S  + + + G++   D  A+  GKV K            N     I++L E++KF  N+  ACLPE     Y+ + GI++
Sbjct:  559 LILNRAINTCECAKATSSDRIVG--GKEVSP---KYKLPYQVLFQAGSF--MCGGTIINKRYIITAAHCLFDGKTQMQPSTHQLMVMIGEHNICD-GANEGGKVIKVEKVHVRSDYANNANDFAILKLAEDIKFTANIKPACLPEKTDKDYSGQTGIIS 1011          
BLAST of EMLSAG00000010484 vs. C. finmarchicus
Match: gi|592859562|gb|GAXK01098000.1| (TSA: Calanus finmarchicus comp38145_c4_seq2 transcribed RNA sequence)

HSP 1 Score: 47.7506 bits (112), Expect = 9.826e-6
Identity = 43/145 (29.66%), Postives = 65/145 (44.83%), Query Frame = 0
Query:   18 GACECGHP-NQRIPMDGDFNSDSSPVLSNESIPWHV-LIRHESTNAQCSGVIVSRRYVLTDSTCFSIDETVQ-VYGDYTEIDFSASTKGKVTK-----------NLEGVQIVQLEEELKFNQNLMSACLPEDPTNVYNEELGIVT 148
            G C+CG P   R+ + G       P   NE  PW V L+R+ S+N  C G ++S   VLT + C +     Q V G++         K   ++           N     IV+L +++ F++ +M ACLP D T  Y+     VT
Sbjct:  147 GPCQCGVPQTNRLRIVG-----GQPASKNE-YPWQVALVRYGSSNPFCGGTLISSNTVLTAAHCQTSTNLFQVVVGEHDVTRSDGEQKIAPSQWISHPDYNSNGNNNDFAIVRLSKDVTFSKTVMPACLP-DSTKNYDNVAATVT 560          
BLAST of EMLSAG00000010484 vs. C. finmarchicus
Match: gi|592948259|gb|GAXK01010294.1| (TSA: Calanus finmarchicus comp993178_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.8986 bits (102), Expect = 3.352e-4
Identity = 47/209 (22.49%), Postives = 86/209 (41.15%), Query Frame = 0
Query:   49 PWHVLIRHESTNAQCSGVIVSRRYVLTDSTCFSIDETVQVYGDYTEIDFSASTKGKVTKNL------------EGVQIVQLEEELKFNQNLMSACLPEDPTNVYNEELGIV--------TYLFNQELLYKDFVPVL-----------WHMFPNITFSHEDKYKR-------PGSPLVTFYNEVWTLIGIF-MQHGFGK----NIYRNIP 214
            PW ++I ++   A C G +V  R+VLT + C      V+V G++  +    S K    K                + ++++ E ++  +N   ACLP+    + +++   +        ++ F  E+L++  VP++           +++  N+ F    K  R        G PL+   N  WT+ GI     G GK     IY  +P
Sbjct: 1047 PWQIVILNKYREAFCGGTLVHPRWVLTAAHCVRKHLIVRV-GEHDLVVHEGSEKEYTVKRTILHPDYNRDTVDNDLALLEIPETVELGKNAAIACLPDQDEPLPDQDHCTIIGWGKEKKSHFFGTEVLHEARVPIVPMSDCMSVYKNYYITDNM-FCAGYKGGRIDSCAGDSGGPLLCQKNNRWTIYGITSFGEGCGKQGKYGIYAKVP 1667          
BLAST of EMLSAG00000010484 vs. C. finmarchicus
Match: gi|592952766|gb|GAXK01005787.1| (TSA: Calanus finmarchicus comp5107068_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 42.743 bits (99), Expect = 4.229e-4
Identity = 35/140 (25.00%), Postives = 64/140 (45.71%), Query Frame = 0
Query:   49 PWHVLIRHESTNAQCSGVIVSRRYVLTDSTC---FSIDETVQVYGDY-------TEIDFSAST----KGKVTKNLEG-VQIVQLEEELKFNQNLMSACLPEDPTNVYNEEL-----GIVTYLF-NQELLYKDFVPVLWHM 167
            PW   +  +S++  C GV+V+ +++LT S C   F   E     G+Y          DF   T    +    K  E  + +++LE++  FN+++   CLP D   +  +       G  +Y   + ++L + F+P+ W M
Sbjct:   15 PWMAALLRDSSDQYCGGVLVTDQHILTASHCVDNFKASEITVRLGEYDFEEDNNARRDFGVKTIYMHENYNRKTYENDIALLKLEKKTSFNKDIWPICLPPDNVALEGKSAFVTGWGTTSYSGQSSDVLLEVFLPI-WKM 431          
BLAST of EMLSAG00000010484 vs. C. finmarchicus
Match: gi|592942310|gb|GAXK01016243.1| (TSA: Calanus finmarchicus comp4948996_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.5874 bits (96), Expect = 6.468e-4
Identity = 36/131 (27.48%), Postives = 55/131 (41.98%), Query Frame = 0
Query:   49 PWHV-LIRHESTNAQCSGVIVSRRYVLTDSTCFSID------------ETVQVYGD--YTEIDFSASTKGKVTKNLEGVQIVQLEEELKFNQNLMSACLPEDPTNVYNEELGIVTYLFNQELLYKDFVPVL 164
            PW V L+R    N +C G ++S R VLT + C+  D            +T +  G+     + F+   +       +   I+QL  ++KF+  +M  CLP   TN  N    I T      L YK   P +
Sbjct:   10 PWQVALVR---GNVRCGGTLLSSRTVLTAAHCYENDFVDHYIIHVQEHDTSRCDGEQKIKALSFTKHPEYNGNTKDKDFAIIQLSRDVKFSNTIMPICLPNPSTNYDNR---ITTVTGWGSLSYKGSYPTV 384          
BLAST of EMLSAG00000010484 vs. C. finmarchicus
Match: gi|592918056|gb|GAXK01040319.1| (TSA: Calanus finmarchicus comp146145_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 1.485e-3
Identity = 39/138 (28.26%), Postives = 61/138 (44.20%), Query Frame = 0
Query:   19 ACECG-HPNQRIPMDGDFNSDSSPVLSNESIPWHVLIRHESTNAQCSGVIVSRRYVLTDSTC--FSIDETVQVYGDYTEIDFSASTKGKVTKNLEG----------------VQIVQLEEELKF---NQNLMSACLPE 134
            +C+CG    QRI      N + S        PW V + +   +  C G I+S R+VLT + C  F  ++   V GD+ + D S +    VTK ++G                V I++L EE+ F   + N+   CL +
Sbjct:   56 SCDCGISRTQRI-----VNGEESGA---GDWPWMVTLEYTPGSYYCGGSIISSRFVLTAAHCIQFKGEKVYVVIGDHDKNDDSEA----VTKRIKGRAIPHPDYDPNNMDNDVAIIRLNEEIDFSAYDGNVSPVCLAQ 433          
BLAST of EMLSAG00000010484 vs. C. finmarchicus
Match: gi|592923799|gb|GAXK01034616.1| (TSA: Calanus finmarchicus comp2966747_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.817 bits (94), Expect = 1.710e-3
Identity = 32/153 (20.92%), Postives = 56/153 (36.60%), Query Frame = 0
Query:   15 KSMGACECGHPNQRIPMDGDFNSDSSPVLSNESIPWHVL--IRHESTNAQCSGVIVSRRYVLTDSTCFSIDETVQVYGDYTEIDFSASTKGKVTKNLEG---------------VQIVQLEEELKFNQ--NLMSACLPEDPTNVYNEELGIVT 148
            K   +C+CG   Q+               +    PW     +R       C G +++ RYVLT + C S    +++Y    E   S     ++    +G               + +V+L + +KF    ++   CLPE     Y +E  +V 
Sbjct:   68 KPSSSCKCGIRQQKAGTQISLKITGGEEAAPNEFPWAAFLQVRGGGKLFNCGGTLINDRYVLTAAHCVSDSGQIEIYVLLGEHKQSEEDSKELVIRADGFLIHHQFDEKEKLYDIALVRLSQRVKFESYPHIRPICLPEGSFKDYRDEEAVVV 526          
BLAST of EMLSAG00000010484 vs. C. finmarchicus
Match: gi|592751970|gb|GAXK01202443.1| (TSA: Calanus finmarchicus comp87665_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.5874 bits (96), Expect = 1.895e-3
Identity = 49/211 (23.22%), Postives = 81/211 (38.39%), Query Frame = 0
Query:   48 IPWHVLIRHESTNAQCSGVIVSRRYVLTDSTCFSIDETVQV---YGDYTEIDFSASTKGKVTKNLE------------------GVQIVQLEEELKFNQNLMSACLPEDPTNV-YNEELGIVTYLFNQE---------LLYKDFVPVL-------WHMFPNITF---------SHEDK-----YKRPGSPLVTFYNEVWTLIGIFMQHGFG 206
            +PW V IR   ++ QC GV+++  Y+ T + C    +  ++    G+Y   D         T  ++                   V ++ L+  + +  N++  CLP  P ++    ++G+V      +         +L+K  VP++       WH   NI            HE           G PL+  YN  WTLIGI    GFG
Sbjct:  250 LPWQVHIR--ISSYQCGGVLLNHWYIATAAHCVHRAKLSKITVHLGEYDTKDGEEEPLDSQTYKVDHIIIHPEFRYMLTQPDRFDVALLHLDRPVFYQDNIIPICLP--PRDIPLTGKIGMVAGWGKTDNSFGKTGTNILHKVLVPIIKNEQCINWHEEKNILVQLHSEMFCAGHEQGKMDACLGDSGGPLIIHYNGRWTLIGI-TSAGFG 867          
BLAST of EMLSAG00000010484 vs. C. finmarchicus
Match: gi|592751969|gb|GAXK01202444.1| (TSA: Calanus finmarchicus comp87665_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 1.936e-3
Identity = 49/211 (23.22%), Postives = 81/211 (38.39%), Query Frame = 0
Query:   48 IPWHVLIRHESTNAQCSGVIVSRRYVLTDSTCFSIDETVQV---YGDYTEIDFSASTKGKVTKNLE------------------GVQIVQLEEELKFNQNLMSACLPEDPTNV-YNEELGIVTYLFNQE---------LLYKDFVPVL-------WHMFPNI---------TFSHEDK-----YKRPGSPLVTFYNEVWTLIGIFMQHGFG 206
            +PW V IR   ++ QC GV+++  Y+ T + C    +  ++    G+Y   D         T  ++                   V ++ L+  + +  N++  CLP  P ++    ++G+V      +         +L+K  VP++       WH   NI            HE           G PL+  YN  WTLIGI    GFG
Sbjct:  250 LPWQVHIR--ISSYQCGGVLLNHWYIATAAHCVHRAKLSKITVHLGEYDTKDGEEEPLDSQTYKVDHIIIHPEFRYMLTQPDRFDVALLHLDRPVFYQDNIIPICLP--PRDIPLTGKIGMVAGWGKTDNSFGKTGTNILHKVLVPIIKNEQCINWHEEKNILVQLHSEMFCAGHEQGKMDACLGDSGGPLIIHYNGRWTLIGI-TSAGFG 867          
BLAST of EMLSAG00000010484 vs. C. finmarchicus
Match: gi|592832673|gb|GAXK01124871.1| (TSA: Calanus finmarchicus comp24349_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.817 bits (94), Expect = 2.932e-3
Identity = 39/143 (27.27%), Postives = 57/143 (39.86%), Query Frame = 0
Query:   20 CECGHPNQRIPMDGDFNSDSSPVLSNESIPWHV--LIRHESTNAQCSGVIVSRRYVLTDSTC-FSIDETVQVYGDYTEIDFSASTKGKVTKNLEG-----------VQIVQLEEELKFNQNLMSACLPEDPTNVYNEELGIVT 148
            C CG  N RI + G      SP   NE  PW V  L    S++  C G +VS + VLT + C    +    V G++         K +V                   I+ L EE+ F  ++  ACLP   +  Y+    +V+
Sbjct:  360 CRCGQANTRIKIVG-----GSPTEENE-YPWQVGLLSSQSSSSPFCGGTLVSNKEVLTAAHCTVGGNAAYVVLGEHDLRRADGEKKVRVCGTTNNPNYNSRTVDYDFSILTLCEEVDFTTDISPACLPTSSSTNYDNRQAVVS 770          
BLAST of EMLSAG00000010484 vs. L. salmonis peptides
Match: EMLSAP00000010484 (pep:novel supercontig:LSalAtl2s:LSalAtl2s696:53423:56261:1 gene:EMLSAG00000010484 transcript:EMLSAT00000010484 description:"maker-LSalAtl2s696-augustus-gene-0.23")

HSP 1 Score: 518.464 bits (1334), Expect = 0.000e+0
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
Query:    1 MLAALALLWTFLFRKSMGACECGHPNQRIPMDGDFNSDSSPVLSNESIPWHVLIRHESTNAQCSGVIVSRRYVLTDSTCFSIDETVQVYGDYTEIDFSASTKGKVTKNLEGVQIVQLEEELKFNQNLMSACLPEDPTNVYNEELGIVTYLFNQELLYKDFVPVLWHMFPNITFSHEDKYKRPGSPLVTFYNEVWTLIGIFMQHGFGKNIYRNIPTIADDLRHELQIKGSCSKKKSKRRRSRITSRH 246
            MLAALALLWTFLFRKSMGACECGHPNQRIPMDGDFNSDSSPVLSNESIPWHVLIRHESTNAQCSGVIVSRRYVLTDSTCFSIDETVQVYGDYTEIDFSASTKGKVTKNLEGVQIVQLEEELKFNQNLMSACLPEDPTNVYNEELGIVTYLFNQELLYKDFVPVLWHMFPNITFSHEDKYKRPGSPLVTFYNEVWTLIGIFMQHGFGKNIYRNIPTIADDLRHELQIKGSCSKKKSKRRRSRITSRH
Sbjct:    1 MLAALALLWTFLFRKSMGACECGHPNQRIPMDGDFNSDSSPVLSNESIPWHVLIRHESTNAQCSGVIVSRRYVLTDSTCFSIDETVQVYGDYTEIDFSASTKGKVTKNLEGVQIVQLEEELKFNQNLMSACLPEDPTNVYNEELGIVTYLFNQELLYKDFVPVLWHMFPNITFSHEDKYKRPGSPLVTFYNEVWTLIGIFMQHGFGKNIYRNIPTIADDLRHELQIKGSCSKKKSKRRRSRITSRH 246          
BLAST of EMLSAG00000010484 vs. L. salmonis peptides
Match: EMLSAP00000003164 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1768:18046:19542:1 gene:EMLSAG00000003164 transcript:EMLSAT00000003164 description:"maker-LSalAtl2s1768-augustus-gene-0.9")

HSP 1 Score: 207.994 bits (528), Expect = 1.563e-65
Identity = 104/246 (42.28%), Postives = 150/246 (60.98%), Query Frame = 0
Query:    1 MLAALALLWTFLFRKSMGACECGHPNQRIPMDGDFNSDSSPVLSNESIPWHVLIRHESTNAQCSGVIVSRRYVLTDSTCFSIDETVQVYGDYTEIDFSASTKGKVTKNLEGVQIVQLEEELKFNQNLMSACLPEDPTNVYNEELGIVTYLFNQELLYKDFVPVLWHMFP-------NITFSHEDKYKRPGSPLVTFYNEVWTLIGIFMQHGFGKN----IYRNIPTIADDLRHELQIKGSCSKKKS 235
            M  A  L+ T LFR+++  C+CG PN +IPM GD +S++ PV  +ESIPWHV I+ E+   +CSGVI+S  YVLTDS CF I + VQVY +Y ++ F  +  G V     G  +++L E L  N+N+MSACLP DP   +  + GIV+++F  ++LYKD+V ++ +  P       NI       YK  G PLVT +N  WTL+GI  ++G   +     + +IP IA+ LR EL++  SCS  K+
Sbjct:    1 MFVAFVLILTVLFRQTLSTCDCGLPNPKIPMIGDTSSETKPVFPHESIPWHVTIKKEAKQIECSGVIISEGYVLTDSLCFWISDEVQVYAEYKDMKFLQNVVGTVVMKEIGANVIKLSENLNLNENVMSACLPSDPVQSFIGKKGIVSHIFENQILYKDYVTIISNNDPKCDRSTNNICARTSTCYKSKGHPLVTLHNGKWTLVGINWENGCDNSNKDTAFGSIPKIANTLRDELKLDDSCSHVKN 246          
BLAST of EMLSAG00000010484 vs. L. salmonis peptides
Match: EMLSAP00000001992 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1357:15483:16755:-1 gene:EMLSAG00000001992 transcript:EMLSAT00000001992 description:"maker-LSalAtl2s1357-snap-gene-0.15")

HSP 1 Score: 49.2914 bits (116), Expect = 2.611e-7
Identity = 31/81 (38.27%), Postives = 47/81 (58.02%), Query Frame = 0
Query:   44 SNESIPWHVLIRHESTNAQ--CSGVIVSRRYVLTDSTCFSIDETVQVYGDYTEIDFSASTKGKVTKNLEGVQIVQLEEELK 122
            ++  IPWH LI+ +++ +   CSGVI+S ++VLT  T   ID+    Y DY E+        K  K+LE VQI+ +E+  K
Sbjct:   94 TDSDIPWHALIKRKNSQSDFFCSGVIISEQWVLT--THIGIDKLKTQYIDYLEV----KVGNKDMKSLEHVQILNIEKITK 168          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000010484 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 2
Match NameE-valueIdentityDescription
-1.642e-421.67symbol:PRSS8 "Uncharacterized protein" species:991... [more]
-2.300e-426.61symbol:CG8213 species:7227 "Drosophila melanogaste... [more]
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BLAST of EMLSAG00000010484 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592816469|gb|GAXK01138099.1|7.880e-725.16TSA: Calanus finmarchicus comp103359_c3_seq1 trans... [more]
gi|592859562|gb|GAXK01098000.1|9.826e-629.66TSA: Calanus finmarchicus comp38145_c4_seq2 transc... [more]
gi|592948259|gb|GAXK01010294.1|3.352e-422.49TSA: Calanus finmarchicus comp993178_c0_seq1 trans... [more]
gi|592952766|gb|GAXK01005787.1|4.229e-425.00TSA: Calanus finmarchicus comp5107068_c0_seq1 tran... [more]
gi|592942310|gb|GAXK01016243.1|6.468e-427.48TSA: Calanus finmarchicus comp4948996_c0_seq1 tran... [more]
gi|592918056|gb|GAXK01040319.1|1.485e-328.26TSA: Calanus finmarchicus comp146145_c1_seq3 trans... [more]
gi|592923799|gb|GAXK01034616.1|1.710e-320.92TSA: Calanus finmarchicus comp2966747_c0_seq1 tran... [more]
gi|592751970|gb|GAXK01202443.1|1.895e-323.22TSA: Calanus finmarchicus comp87665_c0_seq1 transc... [more]
gi|592751969|gb|GAXK01202444.1|1.936e-323.22TSA: Calanus finmarchicus comp87665_c0_seq2 transc... [more]
gi|592832673|gb|GAXK01124871.1|2.932e-327.27TSA: Calanus finmarchicus comp24349_c0_seq1 transc... [more]

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BLAST of EMLSAG00000010484 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAP000000104840.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s696:53423... [more]
EMLSAP000000031641.563e-6542.28pep:novel supercontig:LSalAtl2s:LSalAtl2s1768:1804... [more]
EMLSAP000000019922.611e-738.27pep:novel supercontig:LSalAtl2s:LSalAtl2s1357:1548... [more]
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BLAST of EMLSAG00000010484 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000010484 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000010484 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000010484 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s696supercontigLSalAtl2s696:53423..56261 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s696-augustus-gene-0.23
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000010484 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000010484EMLSAT00000010484-706331Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s696:53423..56261+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000010484-693250 ID=EMLSAG00000010484-693250|Name=EMLSAG00000010484|organism=Lepeophtheirus salmonis|type=gene|length=2839bp|location=Sequence derived from alignment at LSalAtl2s696:53423..56261+ (Lepeophtheirus salmonis)
ATTTGAAGTCTTATAACATCATGTTAGCAGCGTTGGCCCTACTATGGACA TTTCTGTTTCGGAAATCCATGGGTGCTTGTGGTATAACGGATACTTAGTA TTTATAATAAACAATTATAACCTTACTTATTAGAATGTGGCCATCCAAAT CAAAGAATCCCAATGGACGGAGACTTTAACTCAGACAGTTCTCCTGTTTT AAGTAATGAAAGTATTCCTTGGCATGTTTTGATTAGACATGAATCTACAA ATGCTCAATGTTCGGGAGTGATTGTGAGTAGGAGATACGTTCTAACAGAT TCAACTTGTTTTAGTATCGATGAAACGGTTCAAGTATATATGAATTAATT AATTTAATTTTCTTATCTAATATTGAGTATTTTATGCAGGTCTATGGTGA CTATACAGAAATTGACTTTTCTGCAAGCACAAAGGGAAAGGTGACAAAGA ATCTGGAAGGGGTTCAAATCGTTCAACTGGAGGAAGAGTTGAAATTCAAT CAGAATTTAATGTCAGCTTGTCTACCAGAGGATCCGACAAATGTCTATAA TGAAGAGTTGGGGATTGGTAATCACTCATTCAGTAAATGTACATACATTT ATTAATTCATCAAATTCTGCTCCATATGACTTATAGTTACTTACTTATTC AATCAAGAGTTACTGTACAAGGACTTTGTTCCTGTTCTGTGGCACATGTT TCCAAATATTACTTTCTCTCACGAGGATAAATATAAGAGGCCAGGCTCTC CTCTAGTGACATTCTATAATGAGGTATGGACTTTGATTGGGATATTTATG CAGCATGGTTTTGGGAAGAATATTTATAGAAATATACCTACTATTGCAGA TGACTTACGCCATGAACTTCAGGTAAATGAATATTGAATGGCATATTATG TTCGGTTGAAGGGGACTTCGCCGAAAACCTATTTGCCGAATAGCCACTTT GCAGATTGGACATTTTGCCAAATGACAACTTTACTCAAAAATATAAGAAA CGTATACCGTGATGATTCATACTATAATACTATATATTTACATACTAGAA AATGACAAACACAACTTGATAATTATAGACTCAAAAACGACCTCAGGTCC ACAAGATTATATATGTATATATTTTTTTTTTGGGCTTGGTGGCTTAGTTT TTGGACATTTTTTGAAAAAAAAAATCTAAAATCTATAGATATTCACTAAA AATTTCAATAAATAAACTATAAATATAAAATTTTTGGGAAAAAATTCAAA AGTTTAATTTTTTTTCCTCAAAAATCGTGGTTAATCACAAAAAATTTAAT TTCTTCGAAAACAATTGGAAAAATAAAAGTTTTTGGAAATAAATTCAAAT ATTAAATATTTACAAAAAAAATTTCAAACATTAAATTTTTAGAAACTTTT TTTTTTAAATATTAAATTTTTGGAACAAAATCTTAAAATATTATATTTTT TTAGAAAAACAAATTCAAAACCTCACAGTTATTCACAGACAATTAATTTT ATGGTGAATAAATTTCAAAAATTCCATTATAAAAATTATTAACAATTCTC AAAAAATTAAGTTTATTGGAGAAAACATTCAAATATTAAATTTTTTGCTC TTCTGCATAATTTGCAAGAATGACCTTTTTATATGAAAATAAATATTATA AAAAATAATTTTTACTCCTATTTTGAGTAAATTTTATTCATCCTCACCAA ATTTAGTTATAGTAAAGAGCAAAAATTCCTTAATTTGGAAGGGTCTAAAG CCCTTTCAGCCCACACCCAGCAGATACCCCTGAGATAGACGAGGGTCGAT CAGGACTTGACTACATACATAACAACTATGTCATATTCAAAACCAAATGA TTGATTCACTCGTATTGTCCATTGGGTCTCAATCATTGATTGATTGAGAC CTTCTTTAAACATTTTTTCCCGTTCTAATATATTTAGTAGTTTTCCTGAT TTTGTTACCACGGTTTTAAAGTGGCTCCAGCCAACTGTTGAAGCATCCTC ATAATAATTTAATTTAATTATTAATTCACCAACGCTGAATGATTGCAATT CATAGAAAATAATTAGACTTTTATCTTTCAATATGTTTGTAGCATGAATG AGAATCCTAATTACATAGTATTGTAGTACAAATCATCATCAAATGTATAC TTTATTATTTTTTCAGTAAAGTGTCCGTGTAACATTATGCTTATATACGG CAATTCACAATACTTTTTTCAGATTAAAGGATCATGTTCCAAAAAGAAAT CAAAACGAAGAAGATCTAGGATAACCTCTCGACATTAAGTTGGACTCCAA ATGAATTATGTTATAACTAATTTCTTAAGGTGTATAGAAAGTATATATAA TTGCATTGTGTTAATGAAATGGATGAATTTAATGGATGAAATAAACGTAG AAGCAAAAAGTTGTAATAATCTTATTCGATTAGCAAGGCATGTAAAATAT CAAAATGTTCTTCTAGCCAAAGTTAATAGAAATACAAGGTTAGACCATCA TGTAATTGGACTTACTAGAATTTTGAATCTGATGTATTGTACCGACTGCT GGGCAAGACAGGCAGATTTTGACAAAACACGTAACCACTCATAGTCAATG ACGTCACTATTGCTAGAATTTTCTATTTAATGTATCGTACCGACTGCTGG CCCACAAAAACGGATTTTGACAAAACAAGTAGCCACCCATCTACTATGAC GTCAATATTAAAAGTATGGTGGAAGTTAAGCATCAGTTGTACATGCGTTA TAGTATTACCATGTATTTTTATTAACCTTGCTTCTAGCTGGGTAATCCCA TAAAAACTTTACACCCAAAATCATAGATTTATATAAAAT
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