EMLSAG00000010730, EMLSAG00000010730-693496 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000010730
Unique Name	EMLSAG00000010730-693496
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000010730 vs. GO
Match: - (symbol:MAU2 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0000785 "chromatin" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0032116 "SMC loading complex" evidence=IEA] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] GO:GO:0005654 GO:GO:0000785 GO:GO:0034088 GO:GO:0032116 OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 GeneTree:ENSGT00390000012198 Ensembl:ENSSSCT00000032349 OMA:GPPPLQF Uniprot:I3LGZ0)

HSP 1 Score: 50.447 bits (119), Expect = 8.063e-8
Identity = 26/69 (37.68%), Postives = 42/69 (60.87%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILN--LPSFLPHHNLVHYNDG 67
            MQ+ SKI D  VQLW+SA+L+DLNK  G+ +     ++++   +S + + +      LP HNL+ + DG
Sbjct:   39 MQLASKIPDMSVQLWSSALLRDLNKACGN-AMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDG 106

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BLAST of EMLSAG00000010730 vs. GO
Match: - (symbol:GSTENG00024719001 "Chromosome 1 SCAF14751, whole genome shotgun sequence" species:99883 "Tetraodon nigroviridis" [GO:0000785 "chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0032116 "SMC loading complex" evidence=ISS] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=ISS] InterPro:IPR011990 GO:GO:0005654 GO:GO:0000785 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 InterPro:IPR019440 Pfam:PF10345 EMBL:CAAE01014751 HOVERGEN:HBG081830 Uniprot:Q4S3B6)

HSP 1 Score: 48.9062 bits (115), Expect = 2.126e-6
Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILN--LPSFLPHHNLVHYNDG 67
            MQ+ SKI D  VQLW+SA+LKDLNK  G+ +     ++++   +S + + +      LP HNL+ + DG
Sbjct:  502 MQLASKIPDMSVQLWSSALLKDLNKSLGN-TMDAHEAAQMHQNFSQQLLQDHIAACSLPEHNLISWTDG 569

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BLAST of EMLSAG00000010730 vs. GO
Match: - (symbol:MAU2 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0000785 "chromatin" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0032116 "SMC loading complex" evidence=IEA] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] InterPro:IPR011990 GO:GO:0005654 GO:GO:0000785 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 KO:K11266 OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 GeneTree:ENSGT00390000012198 CTD:23383 TreeFam:TF105981 EMBL:AADN03008900 RefSeq:XP_425908.2 UniGene:Gga.20253 Ensembl:ENSGALT00000004696 GeneID:428348 KEGG:gga:428348 Uniprot:F1N9E5)

HSP 1 Score: 48.521 bits (114), Expect = 3.760e-6
Identity = 26/69 (37.68%), Postives = 42/69 (60.87%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILNL--PSFLPHHNLVHYNDG 67
            MQ+ SKI D  VQLW+SA+L+DLNK  G+ +     ++++   +S + + +      LP HNL+ + DG
Sbjct:  575 MQLASKIPDMSVQLWSSALLRDLNKACGN-AMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDG 642

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BLAST of EMLSAG00000010730 vs. GO
Match: - (symbol:MAU2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000785 "chromatin" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0032116 "SMC loading complex" evidence=IEA] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] InterPro:IPR011990 GO:GO:0005654 GO:GO:0000785 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 KO:K11266 OMA:ISWTDGP OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 GeneTree:ENSGT00390000012198 CTD:23383 TreeFam:TF105981 EMBL:AAEX03012271 RefSeq:XP_541923.3 Ensembl:ENSCAFT00000022716 GeneID:484807 KEGG:cfa:484807 Uniprot:F1P830)

HSP 1 Score: 48.1358 bits (113), Expect = 4.379e-6
Identity = 26/69 (37.68%), Postives = 42/69 (60.87%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILNL--PSFLPHHNLVHYNDG 67
            MQ+ SKI D  VQLW+SA+L+DLNK  G+ +     ++++   +S + + +      LP HNL+ + DG
Sbjct:  526 MQLASKIPDMSVQLWSSALLRDLNKACGN-AMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDG 593

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BLAST of EMLSAG00000010730 vs. GO
Match: - (symbol:MAU2 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0000785 "chromatin" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0032116 "SMC loading complex" evidence=IEA] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] InterPro:IPR011990 GO:GO:0005654 GO:GO:0000785 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 OMA:ISWTDGP OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 GeneTree:ENSGT00390000012198 TreeFam:TF105981 EMBL:DAAA02019030 PRIDE:F1MM05 Ensembl:ENSBTAT00000008054 Uniprot:F1MM05)

HSP 1 Score: 48.1358 bits (113), Expect = 4.496e-6
Identity = 26/69 (37.68%), Postives = 42/69 (60.87%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILNL--PSFLPHHNLVHYNDG 67
            MQ+ SKI D  VQLW+SA+L+DLNK  G+ +     ++++   +S + + +      LP HNL+ + DG
Sbjct:  525 MQLASKIPDMSVQLWSSALLRDLNKACGN-AMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDG 592

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BLAST of EMLSAG00000010730 vs. GO
Match: - (symbol:MAU2 "MAU2 chromatid cohesion factor homolog" species:9606 "Homo sapiens" [GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000785 "chromatin" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA;TAS] [GO:0032116 "SMC loading complex" evidence=IMP;IDA] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IMP] [GO:0047485 "protein N-terminus binding" evidence=IPI] InterPro:IPR011990 Reactome:REACT_115566 GO:GO:0005654 GO:GO:0000785 Reactome:REACT_21300 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 eggNOG:NOG298336 HOGENOM:HOG000008037 KO:K11266 OMA:ISWTDGP OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 EMBL:AB020699 EMBL:AK126227 EMBL:AC022543 EMBL:BC010222 EMBL:BC063863 EMBL:AL110250 PIR:T14778 RefSeq:NP_056144.3 UniGene:Hs.654939 UniGene:Hs.744479 ProteinModelPortal:Q9Y6X3 BioGrid:116959 DIP:DIP-29196N IntAct:Q9Y6X3 MINT:MINT-2824314 STRING:9606.ENSP00000376127 PhosphoSite:Q9Y6X3 DMDM:118597347 PaxDb:Q9Y6X3 PRIDE:Q9Y6X3 DNASU:23383 Ensembl:ENST00000392313 GeneID:23383 KEGG:hsa:23383 UCSC:uc002nmk.4 UCSC:uc002nml.4 UCSC:uc010ece.3 CTD:23383 GeneCards:GC19P019433 HGNC:HGNC:29140 HPA:HPA048223 MIM:614560 neXtProt:NX_Q9Y6X3 PharmGKB:PA134991458 InParanoid:Q9Y6X3 TreeFam:TF105981 ChiTaRS:MAU2 GenomeRNAi:23383 NextBio:45492 PRO:PR:Q9Y6X3 ArrayExpress:Q9Y6X3 Bgee:Q9Y6X3 CleanEx:HS_KIAA0892 Genevestigator:Q9Y6X3 Uniprot:Q9Y6X3)

HSP 1 Score: 48.1358 bits (113), Expect = 4.499e-6
Identity = 26/69 (37.68%), Postives = 42/69 (60.87%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILNL--PSFLPHHNLVHYNDG 67
            MQ+ SKI D  VQLW+SA+L+DLNK  G+ +     ++++   +S + + +      LP HNL+ + DG
Sbjct:  526 MQLASKIPDMSVQLWSSALLRDLNKACGN-AMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDG 593

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BLAST of EMLSAG00000010730 vs. GO
Match: - (symbol:Mau2 "MAU2 sister chromatid cohesion factor" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=IEA;ISO] [GO:0032116 "SMC loading complex" evidence=IEA;ISO] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IEA;ISO] [GO:0047485 "protein N-terminus binding" evidence=IEA;ISO] InterPro:IPR011990 RGD:1308759 GO:GO:0005654 GO:GO:0000785 Gene3D:1.25.40.10 GO:GO:0034088 EMBL:CH474031 GO:GO:0032116 OMA:ISWTDGP OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 GeneTree:ENSGT00390000012198 TreeFam:TF105981 EMBL:AABR06086884 RefSeq:XP_006252939.1 UniGene:Rn.49215 Ensembl:ENSRNOT00000027846 GeneID:290668 UCSC:RGD:1308759 NextBio:35565547 Uniprot:D3Z8G8)

HSP 1 Score: 48.1358 bits (113), Expect = 4.554e-6
Identity = 26/69 (37.68%), Postives = 42/69 (60.87%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILNL--PSFLPHHNLVHYNDG 67
            MQ+ SKI D  VQLW+SA+L+DLNK  G+ +     ++++   +S + + +      LP HNL+ + DG
Sbjct:  531 MQLASKIPDMSVQLWSSALLRDLNKACGN-AMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDG 598

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BLAST of EMLSAG00000010730 vs. GO
Match: - (symbol:Mau2 "MAU2 chromatid cohesion factor homolog (C. elegans)" species:10090 "Mus musculus" [GO:0000785 "chromatin" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0032116 "SMC loading complex" evidence=ISO] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=ISO] [GO:0047485 "protein N-terminus binding" evidence=ISO] [GO:0051301 "cell division" evidence=IEA] InterPro:IPR011990 MGI:MGI:1921799 GO:GO:0005654 GO:GO:0000785 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 eggNOG:NOG298336 KO:K11266 OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 GeneTree:ENSGT00390000012198 CTD:23383 EMBL:AK018662 EMBL:AK049277 EMBL:AK081967 EMBL:BC023401 EMBL:BC125568 EMBL:BC132139 EMBL:BC144990 EMBL:AK220358 RefSeq:NP_001161411.1 RefSeq:NP_083269.4 RefSeq:XP_006509839.1 UniGene:Mm.269061 ProteinModelPortal:Q9D2X5 SMR:Q9D2X5 BioGrid:216835 IntAct:Q9D2X5 STRING:10090.ENSMUSP00000054763 PhosphoSite:Q9D2X5 PaxDb:Q9D2X5 PRIDE:Q9D2X5 Ensembl:ENSMUST00000050561 GeneID:74549 KEGG:mmu:74549 UCSC:uc009lyj.2 UCSC:uc009lyk.2 InParanoid:Q059Q4 NextBio:341058 PRO:PR:Q9D2X5 Bgee:Q9D2X5 CleanEx:MM_9130404D08RIK Genevestigator:Q9D2X5 Uniprot:Q9D2X5)

HSP 1 Score: 48.1358 bits (113), Expect = 4.598e-6
Identity = 26/69 (37.68%), Postives = 42/69 (60.87%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILNL--PSFLPHHNLVHYNDG 67
            MQ+ SKI D  VQLW+SA+L+DLNK  G+ +     ++++   +S + + +      LP HNL+ + DG
Sbjct:  532 MQLASKIPDMSVQLWSSALLRDLNKACGN-AMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDG 599

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BLAST of EMLSAG00000010730 vs. GO
Match: - (symbol:mau2 "MAU2 chromatid cohesion factor homolog" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785 "chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0032116 "SMC loading complex" evidence=ISS] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=ISS] InterPro:IPR011990 GO:GO:0005654 GO:GO:0000785 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 eggNOG:NOG298336 HOGENOM:HOG000008037 InterPro:IPR019440 Pfam:PF10345 EMBL:BC160796 UniGene:Str.17606 STRING:8364.ENSXETP00000028584 Xenbase:XB-GENE-1015721 Bgee:B1H1Z8 Uniprot:B1H1Z8)

HSP 1 Score: 47.3654 bits (111), Expect = 7.550e-6
Identity = 26/69 (37.68%), Postives = 42/69 (60.87%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILNL--PSFLPHHNLVHYNDG 67
            MQ+ SKI D  VQLW+SA+L+DLNK  G+ +     ++++   +S + + +      LP HNL+ + DG
Sbjct:  517 MQLASKIPDMSVQLWSSALLRDLNKACGN-NIDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDG 584

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BLAST of EMLSAG00000010730 vs. GO
Match: - (symbol:IscW_ISCW010639 "Putative uncharacterized protein" species:6945 "Ixodes scapularis" [GO:0000785 "chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0032116 "SMC loading complex" evidence=ISS] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=ISS] InterPro:IPR011990 GO:GO:0005654 GO:GO:0000785 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 eggNOG:NOG298336 KO:K11266 OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 EMBL:DS856158 RefSeq:XP_002400648.1 UniGene:Isc.11034 STRING:6945.ISCW010639-PA EnsemblMetazoa:ISCW010639-RA GeneID:8035797 KEGG:isc:IscW_ISCW010639 VectorBase:ISCW010639 CTD:8035797 OMA:ELYCQEX PhylomeDB:B7Q4I8 Uniprot:B7Q4I8)

HSP 1 Score: 47.3654 bits (111), Expect = 7.631e-6
Identity = 34/95 (35.79%), Postives = 48/95 (50.53%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILN---LPSFLPHHNLVHYNDGLFHSSDNHLGAVPPATSNAGLSSSS 92
            MQ+ SKI D  VQLW SA+LKDL +L G   ++  + +  TH   ++ +LN     S LP H L+ + DG            PP  +    S+SS
Sbjct:  490 MQLASKIPDVHVQLWASALLKDLYRLCGQPVQE--QEAIQTHANFSQLLLNDHFQASQLPEHGLIQWIDG-----------EPPVMNTTAASTSS 571

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BLAST of EMLSAG00000010730 vs. C. finmarchicus
Match: gi|592771056|gb|GAXK01183512.1| (TSA: Calanus finmarchicus comp56121_c10_seq4 transcribed RNA sequence)

HSP 1 Score: 47.3654 bits (111), Expect = 2.223e-6
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILN---LPSFLPHHNLVHYNDGLF 69
            MQ+ SKI D  VQLW SAILKDL ++ GD +++  +  +  H   ++T+L      + L  H L+++ DG F
Sbjct:  222 MQLASKIPDVHVQLWASAILKDLYRMQGDPTRE--QEGQAMHTNYSQTLLKDHFAATQLQEHQLINWTDGNF 431

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BLAST of EMLSAG00000010730 vs. C. finmarchicus
Match: gi|592771057|gb|GAXK01183511.1| (TSA: Calanus finmarchicus comp56121_c10_seq3 transcribed RNA sequence)

HSP 1 Score: 47.3654 bits (111), Expect = 2.223e-6
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILN---LPSFLPHHNLVHYNDGLF 69
            MQ+ SKI D  VQLW SAILKDL ++ GD +++  +  +  H   ++T+L      + L  H L+++ DG F
Sbjct:  222 MQLASKIPDVHVQLWASAILKDLYRMQGDPTRE--QEGQAMHTNYSQTLLKDHFAATQLQEHQLINWTDGNF 431

[Close]

BLAST of EMLSAG00000010730 vs. C. finmarchicus
Match: gi|592771058|gb|GAXK01183510.1| (TSA: Calanus finmarchicus comp56121_c10_seq2 transcribed RNA sequence)

HSP 1 Score: 47.3654 bits (111), Expect = 2.247e-6
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILN---LPSFLPHHNLVHYNDGLF 69
            MQ+ SKI D  VQLW SAILKDL ++ GD +++  +  +  H   ++T+L      + L  H L+++ DG F
Sbjct:  222 MQLASKIPDVHVQLWASAILKDLYRMQGDPTRE--QEGQAMHTNYSQTLLKDHFAATQLQEHQLINWTDGNF 431

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BLAST of EMLSAG00000010730 vs. C. finmarchicus
Match: gi|592771059|gb|GAXK01183509.1| (TSA: Calanus finmarchicus comp56121_c10_seq1 transcribed RNA sequence)

HSP 1 Score: 47.3654 bits (111), Expect = 2.247e-6
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILN---LPSFLPHHNLVHYNDGLF 69
            MQ+ SKI D  VQLW SAILKDL ++ GD +++  +  +  H   ++T+L      + L  H L+++ DG F
Sbjct:  222 MQLASKIPDVHVQLWASAILKDLYRMQGDPTRE--QEGQAMHTNYSQTLLKDHFAATQLQEHQLINWTDGNF 431

[Close]

BLAST of EMLSAG00000010730 vs. C. finmarchicus
Match: gi|592858473|gb|GAXK01099089.1| (TSA: Calanus finmarchicus comp238434_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 2.595e+0
Identity = 18/41 (43.90%), Postives = 22/41 (53.66%), Query Frame = 0

Query:   28 GDRSKKGFRSSRITHKYSNKTILNLPSFLPHHNLVHYNDGL 68
            GD S+      R  H+YS +T L   SF P  NLVH +D L
Sbjct:  298 GDASQASL--PRTVHQYSPQTRLMKRSFSPLPNLVHQDDHL 414

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BLAST of EMLSAG00000010730 vs. C. finmarchicus
Match: gi|592858474|gb|GAXK01099088.1| (TSA: Calanus finmarchicus comp238434_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 2.722e+0
Identity = 18/41 (43.90%), Postives = 22/41 (53.66%), Query Frame = 0

Query:   28 GDRSKKGFRSSRITHKYSNKTILNLPSFLPHHNLVHYNDGL 68
            GD S+      R  H+YS +T L   SF P  NLVH +D L
Sbjct:  556 GDASQASL--PRTVHQYSPQTRLMKRSFSPLPNLVHQDDHL 672

[Close]

BLAST of EMLSAG00000010730 vs. C. finmarchicus
Match: gi|592858475|gb|GAXK01099087.1| (TSA: Calanus finmarchicus comp238434_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 2.730e+0
Identity = 18/41 (43.90%), Postives = 22/41 (53.66%), Query Frame = 0

Query:   28 GDRSKKGFRSSRITHKYSNKTILNLPSFLPHHNLVHYNDGL 68
            GD S+      R  H+YS +T L   SF P  NLVH +D L
Sbjct:  563 GDASQASL--PRTVHQYSPQTRLMKRSFSPLPNLVHQDDHL 679

[Close]

BLAST of EMLSAG00000010730 vs. L. salmonis peptides
Match: EMLSAP00000010730 (pep:novel supercontig:LSalAtl2s:LSalAtl2s710:106713:107046:1 gene:EMLSAG00000010730 transcript:EMLSAT00000010730 description:"maker-LSalAtl2s710-snap-gene-1.8")

HSP 1 Score: 218.009 bits (554), Expect = 3.749e-74
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILNLPSFLPHHNLVHYNDGLFHSSDNHLGAVPPATSNAGLSSSSFPMSIVLKIIVHNIFN 108
            MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILNLPSFLPHHNLVHYNDGLFHSSDNHLGAVPPATSNAGLSSSSFPMSIVLKIIVHNIFN
Sbjct:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILNLPSFLPHHNLVHYNDGLFHSSDNHLGAVPPATSNAGLSSSSFPMSIVLKIIVHNIFN 108

[Close]

BLAST of EMLSAG00000010730 vs. L. salmonis peptides
Match: EMLSAP00000003584 (pep:novel supercontig:LSalAtl2s:LSalAtl2s196:30861:33965:1 gene:EMLSAG00000003584 transcript:EMLSAT00000003584 description:"maker-LSalAtl2s196-augustus-gene-0.9")

HSP 1 Score: 98.2117 bits (243), Expect = 7.186e-25
Identity = 58/103 (56.31%), Postives = 69/103 (66.99%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGD--RSKKGFRSSRITHKYSNKTILN---LPSFLPHHNLVHYNDG---LFHSSDNHLGAVPPATSNAGLSSSSFPM 95
            MQ+ SKI D  VQLW SAILKDLN+LTGD  R ++G     + H   ++ +L      + LP HNLVH+ DG    F SSDNHL AVPP TS+AGLSSSSFPM
Sbjct:  527 MQLASKIPDLHVQLWASAILKDLNQLTGDHLREQEGL----LMHNNYSQILLKDHFKATQLPEHNLVHWTDGPFPSFASSDNHLEAVPPTTSDAGLSSSSFPM 625

[Close]

BLAST of EMLSAG00000010730 vs. Select Arthropod Genomes
Match: gb|KFM59181.1| (MAU2 chromatid cohesion factor-like protein, partial [Stegodyphus mimosarum])

HSP 1 Score: 48.521 bits (114), Expect = 5.412e-7
Identity = 31/72 (43.06%), Postives = 39/72 (54.17%), Query Frame = 0

Query:    1 MQIHSKILDPQVQLWTSAILKDLNKLTGDRSKKGFRSSRITHKYSNKTILNL-----PSFLPHHNLVHYNDG 67
            MQ+ SKI D  VQLW SA+LKDL +L GD      R       +SN + L L      S LP HNL+ + +G
Sbjct:  402 MQLASKIPDVHVQLWASALLKDLYRLCGDP----LREQEAIQTHSNFSQLLLKDHFQASQLPEHNLIQWIEG 469

The following BLAST results are available for this feature:

BLAST of EMLSAG00000010730 vs. GO
BLAST of EMLSAG00000010730 vs. C. finmarchicus
BLAST of EMLSAG00000010730 vs. L. salmonis peptides
BLAST of EMLSAG00000010730 vs. SwissProt
BLAST of EMLSAG00000010730 vs. Select Arthropod Genomes
BLAST of EMLSAG00000010730 vs. nr
BLAST of EMLSAG00000010730 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000010730 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 23


Match Name	E-value	Identity	Description
-	8.063e-8	37.68	symbol:MAU2 "Uncharacterized protein" species:9823...	[more]
-	2.126e-6	39.13	symbol:GSTENG00024719001 "Chromosome 1 SCAF14751, ...	[more]
-	3.760e-6	37.68	symbol:MAU2 "Uncharacterized protein" species:9031...	[more]
-	4.379e-6	37.68	symbol:MAU2 "Uncharacterized protein" species:9615...	[more]
-	4.496e-6	37.68	symbol:MAU2 "Uncharacterized protein" species:9913...	[more]
-	4.499e-6	37.68	symbol:MAU2 "MAU2 chromatid cohesion factor homolo...	[more]
-	4.554e-6	37.68	symbol:Mau2 "MAU2 sister chromatid cohesion factor...	[more]
-	4.598e-6	37.68	symbol:Mau2 "MAU2 chromatid cohesion factor homolo...	[more]
-	7.550e-6	37.68	symbol:mau2 "MAU2 chromatid cohesion factor homolo...	[more]
-	7.631e-6	35.79	symbol:IscW_ISCW010639 "Putative uncharacterized p...	[more]

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BLAST of EMLSAG00000010730 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 7


Match Name	E-value	Identity	Description
gi\|592771056\|gb\|GAXK01183512.1\|	2.223e-6	38.89	TSA: Calanus finmarchicus comp56121_c10_seq4 trans...	[more]
gi\|592771057\|gb\|GAXK01183511.1\|	2.223e-6	38.89	TSA: Calanus finmarchicus comp56121_c10_seq3 trans...	[more]
gi\|592771058\|gb\|GAXK01183510.1\|	2.247e-6	38.89	TSA: Calanus finmarchicus comp56121_c10_seq2 trans...	[more]
gi\|592771059\|gb\|GAXK01183509.1\|	2.247e-6	38.89	TSA: Calanus finmarchicus comp56121_c10_seq1 trans...	[more]
gi\|592858473\|gb\|GAXK01099089.1\|	2.595e+0	43.90	TSA: Calanus finmarchicus comp238434_c0_seq3 trans...	[more]
gi\|592858474\|gb\|GAXK01099088.1\|	2.722e+0	43.90	TSA: Calanus finmarchicus comp238434_c0_seq2 trans...	[more]
gi\|592858475\|gb\|GAXK01099087.1\|	2.730e+0	43.90	TSA: Calanus finmarchicus comp238434_c0_seq1 trans...	[more]

BLAST of EMLSAG00000010730 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2


Match Name	E-value	Identity	Description
EMLSAP00000010730	3.749e-74	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s710:10671...	[more]
EMLSAP00000003584	7.186e-25	56.31	pep:novel supercontig:LSalAtl2s:LSalAtl2s196:30861...	[more]

BLAST of EMLSAG00000010730 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000010730 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1


Match Name	E-value	Identity	Description
gb\|KFM59181.1\|	5.412e-7	43.06	MAU2 chromatid cohesion factor-like protein, parti...	[more]

BLAST of EMLSAG00000010730 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000010730 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s710	supercontig	LSalAtl2s710:106713..107046 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s710-snap-gene-1.8
Biotype	protein_coding
Evidence	IEA
Note	Hypothetical protein

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000010730 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000010730	EMLSAT00000010730-706577	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s710:106713..107046+

gene from alignment at LSalAtl2s710:106713..107046+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000010730-693496 ID=EMLSAG00000010730-693496|Name=EMLSAG00000010730|organism=Lepeophtheirus salmonis|type=gene|length=334bp|location=Sequence derived from alignment at LSalAtl2s710:106713..107046+ (Lepeophtheirus salmonis)
ATGCAAATTCATTCTAAAATTCTGGATCCACAAGTACAACTATGGACCTC
AGCTATTTTAAAAGACCTCAATAAATTAACTGGCGATCGTTTAAGGGAGC
AAAAAGGGATTCAGATCTTCAAGAATTACTCACAAATACTCCAATAAGAC
CATTTTAAATCTACCTAGCTTCCTTCCTCATCATAATCTTGTTCATTACA
ACGATGGACTTTTCCATTCTTCAGATAATCATTTGGGGGCTGTTCCTCCT
GCAACTTCCAATGCAGGTCTTTCTTCATCATCTTTTCCTATGTCTATTGT
ATTAAAAATTATTGTTCACAATATATTTAACTAG

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