EMLSAG00000012204, EMLSAG00000012204-694970 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000012204
Unique NameEMLSAG00000012204-694970
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000012204 vs. GO
Match: - (symbol:scaf "scarface" species:7227 "Drosophila melanogaster" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005615 "extracellular space" evidence=IDA] [GO:0048803 "imaginal disc-derived male genitalia morphogenesis" evidence=IMP] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS50240 SMART:SM00020 EMBL:AE013599 GO:GO:0005615 GO:GO:0006508 GO:GO:0016787 SUPFAM:SSF50494 GO:GO:0048803 GeneTree:ENSGT00700000104508 EMBL:AY047548 RefSeq:NP_610180.1 RefSeq:NP_724424.1 UniGene:Dm.7042 STRING:7227.FBpp0085397 EnsemblMetazoa:FBtr0086060 EnsemblMetazoa:FBtr0086061 GeneID:35505 KEGG:dme:Dmel_CG11066 UCSC:CG11066-RA CTD:35505 FlyBase:FBgn0033033 eggNOG:NOG276735 InParanoid:Q7K5M0 OMA:TTRYVPP OrthoDB:EOG757CWW ChiTaRS:scarface GenomeRNAi:35505 NextBio:793749 Uniprot:Q7K5M0)

HSP 1 Score: 59.3066 bits (142), Expect = 5.813e-8
Identity = 47/146 (32.19%), Postives = 62/146 (42.47%), Query Frame = 0 
Query:  339 THEALTQAEAXHSPSPAXQASPYHSPTPVPQEHPYTPQQQSSPYSYRTPQNSYYEASQPTAYEPAPPSKPVQYSGYELRGASHDLCPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPY 484
            T+E L  A A   P    +  P  +P P  Q+  Y  + Q SP  + TPQ               P + P  ++           C SAL C  +  C+  GV+    V  SP     RVPL  C+  + GS   CCRDPNYVDP+
Sbjct:  288 TNEYLPPAAANEIP----RFEPDRAPQPSNQKPIYRGEDQLSPQIFPTPQ---------------PANVPKHFAK----------CASALVCTSENFCNAIGVLSETPVELSPMEAAFRVPLTDCLQTENGSPGKCCRDPNYVDPW 404
[Close]
BLAST of EMLSAG00000012204 vs. C. finmarchicus
Match: gi|592906281|gb|GAXK01052094.1| (TSA: Calanus finmarchicus comp28945_c4_seq1 transcribed RNA sequence)

HSP 1 Score: 91.6633 bits (226), Expect = 1.265e-18
Identity = 51/140 (36.43%), Postives = 70/140 (50.00%), Query Frame = 0 
Query:   53 FHNGSASYSPPEIRTECQAGSYCTVDMFCDVNVTISSVPLNLTEEEKDDRGELIPCWHVETQEIQVCCNPPSDEPK------ENVKSEDLKDFATCPRVPRAFSESSCSDVASTCASVGKPDQSCLNNELCCYDGCANRC 186
            F   + +   PE  T+C  G  C  D+FCD   T+    + LT+EE+ +RG+L PC +  TQ+  VCC  P   P       +  + ++LK   TCP +        C    S C SVG  D  C+ N LCC+DGCAN C
Sbjct: 1135 FQQDAGNSQLPE--TQCSEGYKCVRDLFCDATGTMVQFRVELTQEERRNRGKLTPCMNQNTQQFDVCCRKPVILPAIENNEVDKFQRQELKP-TTCPVINILPPIEQCQGRPSNCWSVGVEDTDCIGNALCCFDGCANVC 1545

HSP 2 Score: 73.559 bits (179), Expect = 6.405e-13
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIH-PQTGSSNVCCRDPNYVDPYS 485
            CPSA+ CV K NC+FNGVIV   V  +PE +  RVPL+PC +  ++ + +VCCRDPNY D ++
Sbjct:  238 CPSAMKCVQKVNCNFNGVIVEEQVVLNPEQEIQRVPLIPCFNAARSNAVDVCCRDPNYKDTWT 426

HSP 3 Score: 37.3502 bits (85), Expect = 1.347e-1
Identity = 19/55 (34.55%), Postives = 24/55 (43.64%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDP 478
            C     CV    CD  G +V   V  + E    R  L PC++  T   +VCCR P
Sbjct: 1339 CSEGYKCVRDLFCDATGTMVQFRVELTQEERRNRGKLTPCMNQNTQQFDVCCRKP 1503
[Close]
BLAST of EMLSAG00000012204 vs. C. finmarchicus
Match: gi|592863208|gb|GAXK01094354.1| (TSA: Calanus finmarchicus comp49420_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 81.2629 bits (199), Expect = 1.127e-16
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSS-NVCCRDPNYVDPY 484
            CPSA+ CVPK NCDF GV+ + V + SP+ + +RVPL+PC++ Q G+  +VCCRDPNY DP+
Sbjct:  241 CPSAMKCVPKINCDFEGVMRNEVFNLSPQMEMLRVPLIPCVNRQAGNVIDVCCRDPNYKDPW 426

HSP 2 Score: 40.0466 bits (92), Expect = 6.884e-3
Identity = 16/28 (57.14%), Postives = 20/28 (71.43%), Query Frame = 0 
Query:  159 STCASVGKPDQSCLNNELCCYDGCANRC 186
            S C SVG+ D  C++N  CC+DGCAN C
Sbjct:  508 SDCWSVGQADFDCIDNAFCCFDGCANVC 591
[Close]
BLAST of EMLSAG00000012204 vs. C. finmarchicus
Match: gi|592863203|gb|GAXK01094359.1| (TSA: Calanus finmarchicus comp49420_c12_seq2 transcribed RNA sequence)

HSP 1 Score: 81.2629 bits (199), Expect = 1.593e-16
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSS-NVCCRDPNYVDPY 484
            CPSA+ CVPK NCDF GV+ + V + SP+ + +RVPL+PC++ Q G+  +VCCRDPNY DP+
Sbjct:  234 CPSAMKCVPKINCDFEGVMRNEVFNLSPQMEMLRVPLIPCVNRQAGNVIDVCCRDPNYKDPW 419

HSP 2 Score: 45.0542 bits (105), Expect = 2.127e-4
Identity = 21/47 (44.68%), Postives = 27/47 (57.45%), Query Frame = 0 
Query:  140 ATCPRVPRAFSESSCSDVASTCASVGKPDQSCLNNELCCYDGCANRC 186
             +CP V      S C+   S C SVG+ D  C++N  CC+DGCAN C
Sbjct:   12 GSCPTVSNIPPVSECAGRLSDCWSVGQADFDCIDNAFCCFDGCANVC 152
[Close]
BLAST of EMLSAG00000012204 vs. C. finmarchicus
Match: gi|592863204|gb|GAXK01094358.1| (TSA: Calanus finmarchicus comp49420_c12_seq1 transcribed RNA sequence)

HSP 1 Score: 81.2629 bits (199), Expect = 1.716e-16
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSS-NVCCRDPNYVDPY 484
            CPSA+ CVPK NCDF GV+ + V + SP+ + +RVPL+PC++ Q G+  +VCCRDPNY DP+
Sbjct:  271 CPSAMKCVPKINCDFEGVMRNEVFNLSPQMEMLRVPLIPCVNRQAGNVIDVCCRDPNYKDPW 456

HSP 2 Score: 44.669 bits (104), Expect = 3.132e-4
Identity = 19/35 (54.29%), Postives = 24/35 (68.57%), Query Frame = 0 
Query:  152 SSCSDVASTCASVGKPDQSCLNNELCCYDGCANRC 186
            SSC+   S C SVG+ D  C++N  CC+DGCAN C
Sbjct:   85 SSCAGRLSDCWSVGQADVDCIDNAFCCFDGCANVC 189
[Close]
BLAST of EMLSAG00000012204 vs. C. finmarchicus
Match: gi|592842879|gb|GAXK01114665.1| (TSA: Calanus finmarchicus comp175869_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 79.7221 bits (195), Expect = 2.962e-15
Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSS-NVCCRDPNYVDPYS 485
            CPSA+ CV K NCDF GVI   V+  SP  D +RVPL+PC++ Q G++ +VCCRDPN+  P S
Sbjct:  653 CPSAMKCVQKVNCDFEGVITDEVLDLSPALDMLRVPLIPCVNRQRGNAVDVCCRDPNHKGPNS 841
[Close]
BLAST of EMLSAG00000012204 vs. C. finmarchicus
Match: gi|592842878|gb|GAXK01114666.1| (TSA: Calanus finmarchicus comp175869_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 79.7221 bits (195), Expect = 3.189e-15
Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSS-NVCCRDPNYVDPYS 485
            CPSA+ CV K NCDF GVI   V+  SP  D +RVPL+PC++ Q G++ +VCCRDPN+  P S
Sbjct:  650 CPSAMKCVQKVNCDFEGVITDEVLDLSPALDMLRVPLIPCVNRQRGNAVDVCCRDPNHKGPNS 838
[Close]
BLAST of EMLSAG00000012204 vs. C. finmarchicus
Match: gi|592842880|gb|GAXK01114664.1| (TSA: Calanus finmarchicus comp175869_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 79.337 bits (194), Expect = 3.540e-15
Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSS-NVCCRDPNYVDPYS 485
            CPSA+ CV K NCDF GVI   V+  SP  D +RVPL+PC++ Q G++ +VCCRDPN+  P S
Sbjct:  665 CPSAMKCVQKVNCDFEGVITDEVLDLSPALDMLRVPLIPCVNRQRGNAVDVCCRDPNHKGPNS 853
[Close]
BLAST of EMLSAG00000012204 vs. C. finmarchicus
Match: gi|592756809|gb|GAXK01197604.1| (TSA: Calanus finmarchicus comp724195_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 73.559 bits (179), Expect = 4.845e-13
Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = 0 
Query:   66 RTECQAGSYCTVDMFCDVNVTISSVPLNLTEEEKDDRGELIPCWHVETQEIQVCCNPPSD-EPKENVKSEDLK--DFATCPRVPRAFSESSCSDVASTCASVGKPDQSCLNNELCCYDGCANRC 186
            +TEC +   C  D FCD + +ISSV + LT+++K  RGELIPC +  T   +VCC   +  +  E + S+ +       CP +      SSC+   S+C +VG+ D  C    +CC+ GC N C
Sbjct:  621 QTECPSQMECVKDQFCDKSGSISSVRVQLTKQDKAKRGELIPCINAATSLFEVCCKKQNGVKQSEKLPSKTISSPQKTACPPINTLPPTSSCAGQTSSCYNVGQVDPDC-GGGVCCFQGCVNVC 989

HSP 2 Score: 55.0694 bits (131), Expect = 3.203e-7
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIH-PQTGSSNVCCRD 477
            CPSA+ CVPK NC+F+GVI    V  +   +  RVPL PCI+  Q  + +VCCR+
Sbjct: 1134 CPSAMQCVPKSNCNFSGVITRETVILTQLQEEWRVPLAPCINLGQRRTVHVCCRE 1298

HSP 3 Score: 42.3578 bits (98), Expect = 3.453e-3
Identity = 22/58 (37.93%), Postives = 30/58 (51.72%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYV 481
            CPS + CV  + CD +G I S  V  + +    R  L+PCI+  T    VCC+  N V
Sbjct:  630 CPSQMECVKDQFCDKSGSISSVRVQLTKQDKAKRGELIPCINAATSLFEVCCKKQNGV 803
[Close]
BLAST of EMLSAG00000012204 vs. C. finmarchicus
Match: gi|592828017|gb|GAXK01128939.1| (TSA: Calanus finmarchicus comp2180597_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 55.4546 bits (132), Expect = 3.236e-8
Identity = 29/58 (50.00%), Postives = 34/58 (58.62%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSN-VCCRDPNY 480
            CP+A  CV    CDFNGV+    VS SP    +RV L  C  P+  +S  VCCRDPNY
Sbjct:  282 CPAATVCVDISRCDFNGVLTDSDVSLSPRLVQMRVALNRCESPRRQTSRKVCCRDPNY 455
[Close]
BLAST of EMLSAG00000012204 vs. C. finmarchicus
Match: gi|592902589|gb|GAXK01055786.1| (TSA: Calanus finmarchicus comp3324309_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 55.0694 bits (131), Expect = 4.735e-8
Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSH--VVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNY 480
            CPSA+ CVP+ NCD  GVI     ++ TS E   +R PL+ C     G  +VCCRDP++
Sbjct:  227 CPSAMKCVPRDNCDLQGVISQKKVILPTSMEILFLRAPLIDC----AGDLHVCCRDPDF 391

HSP 2 Score: 31.5722 bits (70), Expect = 3.438e+0
Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 0 
Query:   96 EEEKDDRGELIPCWHVETQEIQVCC 120
            E++KD R ELIPC +  T    VCC
Sbjct:    8 EKDKDKRAELIPCMNPNTGLFDVCC 82
[Close]
BLAST of EMLSAG00000012204 vs. L. salmonis peptides
Match: EMLSAP00000012204 (pep:novel supercontig:LSalAtl2s:LSalAtl2s884:108860:111527:1 gene:EMLSAG00000012204 transcript:EMLSAT00000012204 description:"maker-LSalAtl2s884-augustus-gene-1.10")

HSP 1 Score: 953.74 bits (2464), Expect = 0.000e+0
Identity = 487/487 (100.00%), Postives = 487/487 (100.00%), Query Frame = 0 
Query:    1 MKAILQLLLCLFPCILAGVPPYYYYNQPPQDAYYQYAPVVAQAPQGAFQYTNFHNGSASYSPPEIRTECQAGSYCTVDMFCDVNVTISSVPLNLTEEEKDDRGELIPCWHVETQEIQVCCNPPSDEPKENVKSEDLKDFATCPRVPRAFSESSCSDVASTCASVGKPDQSCLNNELCCYDGCANRCISDLSPEPVEETSPSEAVSNFLSGSNSHSXSALPYRHSYYHPTPYAAPSYHHSASYAPRPFKAIFPQSPSYSIRTSGSVSSSTPKPNSVEVAXPSXPTTQSPPSPAYPRXPSYSQSTIYKPEKTGSPYSSYSHSYSNSQSFGYSXPASXAAHTHEALTQAEAXHSPSPAXQASPYHSPTPVPQEHPYTPQQQSSPYSYRTPQNSYYEASQPTAYEPAPPSKPVQYSGYELRGASHDLCPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPYSQY 487
            MKAILQLLLCLFPCILAGVPPYYYYNQPPQDAYYQYAPVVAQAPQGAFQYTNFHNGSASYSPPEIRTECQAGSYCTVDMFCDVNVTISSVPLNLTEEEKDDRGELIPCWHVETQEIQVCCNPPSDEPKENVKSEDLKDFATCPRVPRAFSESSCSDVASTCASVGKPDQSCLNNELCCYDGCANRCISDLSPEPVEETSPSEAVSNFLSGSNSHSXSALPYRHSYYHPTPYAAPSYHHSASYAPRPFKAIFPQSPSYSIRTSGSVSSSTPKPNSVEVAXPSXPTTQSPPSPAYPRXPSYSQSTIYKPEKTGSPYSSYSHSYSNSQSFGYSXPASXAAHTHEALTQAEAXHSPSPAXQASPYHSPTPVPQEHPYTPQQQSSPYSYRTPQNSYYEASQPTAYEPAPPSKPVQYSGYELRGASHDLCPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPYSQY
Sbjct:    1 MKAILQLLLCLFPCILAGVPPYYYYNQPPQDAYYQYAPVVAQAPQGAFQYTNFHNGSASYSPPEIRTECQAGSYCTVDMFCDVNVTISSVPLNLTEEEKDDRGELIPCWHVETQEIQVCCNPPSDEPKENVKSEDLKDFATCPRVPRAFSESSCSDVASTCASVGKPDQSCLNNELCCYDGCANRCISDLSPEPVEETSPSEAVSNFLSGSNSHSXSALPYRHSYYHPTPYAAPSYHHSASYAPRPFKAIFPQSPSYSIRTSGSVSSSTPKPNSVEVAXPSXPTTQSPPSPAYPRXPSYSQSTIYKPEKTGSPYSSYSHSYSNSQSFGYSXPASXAAHTHEALTQAEAXHSPSPAXQASPYHSPTPVPQEHPYTPQQQSSPYSYRTPQNSYYEASQPTAYEPAPPSKPVQYSGYELRGASHDLCPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPYSQY 487
[Close]
BLAST of EMLSAG00000012204 vs. L. salmonis peptides
Match: EMLSAP00000000708 (pep:novel supercontig:LSalAtl2s:LSalAtl2s110:876596:884706:-1 gene:EMLSAG00000000708 transcript:EMLSAT00000000708 description:"maker-LSalAtl2s110-augustus-gene-8.13")

HSP 1 Score: 102.834 bits (255), Expect = 2.338e-23
Identity = 54/145 (37.24%), Postives = 76/145 (52.41%), Query Frame = 0 
Query:   64 EIRTECQAGSYCTVDMFCDVNVTISSVPLNLTEEEKDDRGELIPCWHVETQEIQVCCNPPSD----------------EPKENVKSEDL----KDFA--TCPRVPRAFSESSCSDVASTCASVGKPDQSCLNNELCCYDGCANRC 186
            E+ TEC AG+ CTVD +CD+N  ISSVP+ LT+E+   RG +IPCWH E+ + ++CC+  +                     ++ S  L    +  A  +CP +      S+C    S C SVG+    C NNE C +DGCAN C
Sbjct:   75 ELLTECPAGTRCTVDYYCDINAVISSVPVKLTKEDLRKRGHMIPCWHEESDKFEICCSXATGFASSSSPSFSSSPSFSSSNPSIVSAKLTLPNRTLAPGSCPTITNRPPVSACQGAKSNCWSVGEAXWDCPNNEFCXFDGCANTC 219

HSP 2 Score: 60.8474 bits (146), Expect = 5.442e-10
Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPYSQ 486
            CPSA+ CVPK+NCDFNGV                   +PC++  +G+ +VCCRDPNY  P+ Q
Sbjct:  776 CPSAMKCVPKQNCDFNGV-------------------MPCVNQNSGTIDVCCRDPNYKXPWPQ 819
[Close]
BLAST of EMLSAG00000012204 vs. L. salmonis peptides
Match: EMLSAP00000005154 (pep:novel supercontig:LSalAtl2s:LSalAtl2s272:206015:209528:-1 gene:EMLSAG00000005154 transcript:EMLSAT00000005154 description:"maker-LSalAtl2s272-augustus-gene-2.17")

HSP 1 Score: 51.2174 bits (121), Expect = 4.481e-7
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLL 461
            CPSA+ CV KK C+F GV+V+  V+T   +D +RVPL+
Sbjct:  438 CPSAMKCVLKKFCNFQGVMVNREVTTDSRYDNIRVPLI 475
[Close]
BLAST of EMLSAG00000012204 vs. Select Arthropod Genomes
Match: EFX85227.1 (hypothetical protein DAPPUDRAFT_237695 [Daphnia pulex])

HSP 1 Score: 60.077 bits (144), Expect = 1.087e-8
Identity = 50/136 (36.76%), Postives = 68/136 (50.00%), Query Frame = 0 
Query:  352 PSPAXQASPYHSPTPVPQEHPYTPQQQSSPYSYRTPQNSYYEASQP--TAYEPAPPSKPVQYSGYELRGASHDLCPSALSCVPKKNCDFNGVIVSHVVSTSP-EFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPY 484
            P PA + +  H  TP  Q    T QQQ+S  S   PQ   Y+ASQ   T     PP            G S   C +AL CV ++ C+ +GV+V+  V  S  E + +RVPL+PC++ +      CCRDP Y DP+
Sbjct:  658 PPPAQKPTTSHQVTPAQQPARPTYQQQAS--SGFQPQ---YQASQSQQTNTIQGPP------------GPSFAGCAAALKCVTEEFCNLDGVMVNTPVRLSAFEKEYLRVPLMPCLNTENNQEGFCCRDPLYNDPW 776

HSP 2 Score: 56.6102 bits (135), Expect = 1.390e-7
Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSP-EFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPY 484
            C +A+ CV ++ C  +GV+V+  V  S  E + +RVPL+ C +P+T     CCRDP Y DP+
Sbjct:  224 CAAAMKCVTEEFCSVDGVMVNTPVRLSDYEKEYLRVPLMECTNPETNQVGFCCRDPLYEDPW 285
[Close]
BLAST of EMLSAG00000012204 vs. Select Arthropod Genomes
Match: AAM68354.1 (scarface, isoform B [Drosophila melanogaster])

HSP 1 Score: 59.3066 bits (142), Expect = 2.209e-8
Identity = 47/146 (32.19%), Postives = 62/146 (42.47%), Query Frame = 0 
Query:  339 THEALTQAEAXHSPSPAXQASPYHSPTPVPQEHPYTPQQQSSPYSYRTPQNSYYEASQPTAYEPAPPSKPVQYSGYELRGASHDLCPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPY 484
            T+E L  A A   P    +  P  +P P  Q+  Y  + Q SP  + TPQ               P + P  ++           C SAL C  +  C+  GV+    V  SP     RVPL  C+  + GS   CCRDPNYVDP+
Sbjct:  288 TNEYLPPAAANEIP----RFEPDRAPQPSNQKPIYRGEDQLSPQIFPTPQ---------------PANVPKHFAK----------CASALVCTSENFCNAIGVLSETPVELSPMEAAFRVPLTDCLQTENGSPGKCCRDPNYVDPW 404
[Close]
BLAST of EMLSAG00000012204 vs. Select Arthropod Genomes
Match: AAF57320.2 (scarface, isoform A [Drosophila melanogaster])

HSP 1 Score: 59.3066 bits (142), Expect = 2.209e-8
Identity = 47/146 (32.19%), Postives = 62/146 (42.47%), Query Frame = 0 
Query:  339 THEALTQAEAXHSPSPAXQASPYHSPTPVPQEHPYTPQQQSSPYSYRTPQNSYYEASQPTAYEPAPPSKPVQYSGYELRGASHDLCPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPY 484
            T+E L  A A   P    +  P  +P P  Q+  Y  + Q SP  + TPQ               P + P  ++           C SAL C  +  C+  GV+    V  SP     RVPL  C+  + GS   CCRDPNYVDP+
Sbjct:  288 TNEYLPPAAANEIP----RFEPDRAPQPSNQKPIYRGEDQLSPQIFPTPQ---------------PANVPKHFAK----------CASALVCTSENFCNAIGVLSETPVELSPMEAAFRVPLTDCLQTENGSPGKCCRDPNYVDPW 404
[Close]
BLAST of EMLSAG00000012204 vs. Select Arthropod Genomes
Match: EEB19342.1 (trypsin, putative [Pediculus humanus corporis])

HSP 1 Score: 56.9954 bits (136), Expect = 1.490e-7
Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 0 
Query:  421 HDLCPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPY 484
            H  CP+AL CV +  C ++G++    V+ + E    +VPL  C + +TG    CCRDPNY DP+
Sbjct:  605 HVGCPAALKCVEESYCTWDGIMSETPVTLTREEAENKVPLSDCQNIETGVIGKCCRDPNYKDPW 668
[Close]
BLAST of EMLSAG00000012204 vs. Select Arthropod Genomes
Match: XP_001120817.2 (PREDICTED: uncharacterized protein LOC724917 [Apis mellifera])

HSP 1 Score: 54.299 bits (129), Expect = 8.225e-7
Identity = 26/61 (42.62%), Postives = 34/61 (55.74%), Query Frame = 0 
Query:  424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPY 484
            C +AL CV ++ C  +G I S  V+ S +    RVP   C +P  G    CCRDPNY DP+
Sbjct:  228 CAAALLCVEEQFCTIDGTISSEPVTLSEKEILRRVPTSSCQNPDNGIIGKCCRDPNYTDPW 288
[Close]
BLAST of EMLSAG00000012204 vs. nr
Match: gi|1108481353|emb|CRK90427.1| (CLUMA_CG004148, isoform A [Clunio marinus])

HSP 1 Score: 65.0846 bits (157), Expect = 9.913e-8
Identity = 33/90 (36.67%), Postives = 48/90 (53.33%), Query Frame = 0 
Query:  395 SQPTAYEPAPPSKPVQYSGYELRGASHDLCPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPY 484
            ++P  +EPAP   PV              C +A++C   + C  NGVI    V+ +P+ +  RVP+  C HP+T     CCRDP+YVDP+
Sbjct:  301 NRPVTFEPAPVIIPVG-------------CSAAMNCTNIQYCTQNGVISKTPVTLTPQQEMFRVPMTDCRHPETNEVGKCCRDPDYVDPW 377
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BLAST of EMLSAG00000012204 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold230_size244653-snap-gene-0.16 (protein:Tk08243 transcript:maker-scaffold230_size244653-snap-gene-0.16-mRNA-1 annotation:"serine proteinase stubble-like")

HSP 1 Score: 85.8853 bits (211), Expect = 7.334e-18
Identity = 49/160 (30.63%), Postives = 75/160 (46.88%), Query Frame = 0 
Query:   65 IRTECQAGSYCTVDMFCDVNVTISSVPLNLTEEEKDDRGELIPCWHVETQEIQVCC----------NPPSDEPKENVKS----EDLKDF------------------------ATCPRVPRAFSESSCSDVASTCASVGKPDQSCLNNELCCYDGCANRC 186
            ++TEC AG+ C  D FCD N  + +  ++L+  +K +RG L+PC + +T +  VCC          N PS + ++N  S    ++   F                         +CP +      +SC+ + S C SVG+ D  C NN LCC+DGC N C
Sbjct:  108 VQTECPAGTKCVGDFFCDENAIMVNYRVDLSPAQKRNRGNLLPCMNQQTGQFDVCCSTASPGSQGNNRPSSQGQQNQPSFQGQQNQPSFQGQSGSSQNNNNPGNNQISNSIPQGSCPNIGALPDIASCNGMKSNCWSVGQADVDCPNNALCCFDGCRNAC 267

HSP 2 Score: 71.633 bits (174), Expect = 1.900e-13
Identity = 25/62 (40.32%), Postives = 43/62 (69.35%), Query Frame = 0 
Query:  423 LCPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPY 484
            +CPSA+ CVP++ CD  G I +  ++ +P+ + +RV  + C++P   + ++CCRDPNY DP+
Sbjct:  640 MCPSAMLCVPRETCDLKGFITTTPLNLTPQLEMLRVATITCVNPDNQNIDICCRDPNYQDPW 701
The following BLAST results are available for this feature:
BLAST of EMLSAG00000012204 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 1
Match NameE-valueIdentityDescription
-5.813e-832.19symbol:scaf "scarface" species:7227 "Drosophila me... [more]
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BLAST of EMLSAG00000012204 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592906281|gb|GAXK01052094.1|1.265e-1836.43TSA: Calanus finmarchicus comp28945_c4_seq1 transc... [more]
gi|592863208|gb|GAXK01094354.1|1.127e-1656.45TSA: Calanus finmarchicus comp49420_c1_seq1 transc... [more]
gi|592863203|gb|GAXK01094359.1|1.593e-1656.45TSA: Calanus finmarchicus comp49420_c12_seq2 trans... [more]
gi|592863204|gb|GAXK01094358.1|1.716e-1656.45TSA: Calanus finmarchicus comp49420_c12_seq1 trans... [more]
gi|592842879|gb|GAXK01114665.1|2.962e-1555.56TSA: Calanus finmarchicus comp175869_c0_seq2 trans... [more]
gi|592842878|gb|GAXK01114666.1|3.189e-1555.56TSA: Calanus finmarchicus comp175869_c0_seq3 trans... [more]
gi|592842880|gb|GAXK01114664.1|3.540e-1555.56TSA: Calanus finmarchicus comp175869_c0_seq1 trans... [more]
gi|592756809|gb|GAXK01197604.1|4.845e-1336.29TSA: Calanus finmarchicus comp724195_c0_seq1 trans... [more]
gi|592828017|gb|GAXK01128939.1|3.236e-850.00TSA: Calanus finmarchicus comp2180597_c0_seq1 tran... [more]
gi|592902589|gb|GAXK01055786.1|4.735e-845.76TSA: Calanus finmarchicus comp3324309_c0_seq1 tran... [more]

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BLAST of EMLSAG00000012204 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAP000000122040.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s884:10886... [more]
EMLSAP000000007082.338e-2337.24pep:novel supercontig:LSalAtl2s:LSalAtl2s110:87659... [more]
EMLSAP000000051544.481e-752.63pep:novel supercontig:LSalAtl2s:LSalAtl2s272:20601... [more]
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BLAST of EMLSAG00000012204 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012204 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 5
Match NameE-valueIdentityDescription
EFX85227.11.087e-836.76hypothetical protein DAPPUDRAFT_237695 [Daphnia pu... [more]
AAM68354.12.209e-832.19scarface, isoform B [Drosophila melanogaster][more]
AAF57320.22.209e-832.19scarface, isoform A [Drosophila melanogaster][more]
EEB19342.11.490e-740.63trypsin, putative [Pediculus humanus corporis][more]
XP_001120817.28.225e-742.62PREDICTED: uncharacterized protein LOC724917 [Apis... [more]
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BLAST of EMLSAG00000012204 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|1108481353|emb|CRK90427.1|9.913e-836.67CLUMA_CG004148, isoform A [Clunio marinus][more]
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BLAST of EMLSAG00000012204 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold230_size244653-snap-gene-0.167.334e-1830.63protein:Tk08243 transcript:maker-scaffold230_size2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s884supercontigLSalAtl2s884:108860..111527 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s884-augustus-gene-1.10
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000012204 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000012204EMLSAT00000012204-708051Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s884:108860..111527+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000012204-694970 ID=EMLSAG00000012204-694970|Name=EMLSAG00000012204|organism=Lepeophtheirus salmonis|type=gene|length=2668bp|location=Sequence derived from alignment at LSalAtl2s884:108860..111527+ (Lepeophtheirus salmonis)
ATTCAGAGGAGGGCTTCCATTTATTTATTATAATCCGTATAGTAAATATT
ATGAATTTGTATCAGAAAAAATAATGCAGTCTTTTTAAATAAAAAAAGCT
CACGAGTATGAGATGACGCGCTAATCCAGAAGGAGGAACCAACAAAAGAA
CCATTTCAAAAAGTATTTAAATAATCGGAGAATGTTACGTTCAGTCTTTA
ATAGCTCAAAAGTTGTAAGTGAAGTGAGAGTCACGTCAGATTCCTTGAGA
GTAAGACTTTGTGTTGTTATTCCTGTTGCACTTTTGTTAAATATATATTT
ATCAAATATATTAAATTGCTCACGAAAAAATAACCACGAAAAAAAGCTAG
ATCATCGTTCTTTACAACAACCGCAAAATAGTTTATTATTATATACATTG
TATATTCACAAATTTGTAACAAAAAATAAAAATTGGAGCAGCCTAAACAC
AACATAACAGTAGTTTTAGTCCCTTCTTTAATTTTGCAGGATAAGAATGA
AAGCCATACTTCAACTCCTTTTATGCCTTTTTCCATGCATTTTGGCTGGT
GTACCACCTTACTACTACTACAACCAACCTCCTCAGGATGCTTATTATCA
ATATGCCCCTGTTGTTGCTCAGGCACCTCAGGGTGCATTCCAATACAGTA
AGTTCAACATCACAATTGTAGTCTTATAACAAAAAGACACATAACATCAT
TTTATAGCAAATTTCCATAATGGTTCTGCTTCTTACTCACCACCTGAGAT
CCGAACAGAATGTCAAGCAGGATCATACTGCACAGTGGACATGTTCTGTG
ACGTGAATGTGACAATATCCTCCGTCCCTCTTAATTTGACAGAAGAGGAA
AAGGATGACCGTGGAGAGTTAATTGTAAGAGACATCACATTTGATTAATT
ACCCAAAAATATATGTATAAATATATATTTACTCTCTCATATCTTAAGCC
ATGTTGGCATGTGGAAACTCAAGAAATCCAAGTGTGTTGCAATCCCCCAT
CGGATGAGCCTAAAGAAAATGTCAAGTCTGAGGATTTGAAGGGTACACTT
TTTGTTTTTATATCTCATGGGAAAGTTATTTTTTGTTTTGTTCTCATTAG
ATTTTGCAACTTGCCCACGTGTACCAAGAGCATTCTCAGAGTCTAGTTGC
TCCGACGTAGCATCAACCTGTGCAAGTGTTGGCAAACCCGATCAGTCATG
CCTTAATAATGAATTGTGTTGTTATGACGGTTGTGCTAATAGATGCATTT
CAGATCTGTGTAAGTAATTTATTCTCTAATTCAATTCAAAATATAATGAA
GAATCTAATGGATATTTCACGTGTCAAATATCCATTAGATACCATTTAAT
ATGTATGTAGATTAATTTTTCTTGATGCTTTGATGTGACAATAATATAAA
ATTAAATGGAATCAAAGTTGATGTAAATTACAATTATTTATCTWTTTTTC
TAAAGCTCCCGAGCCAGTGGAAGAAACATCACCCTCCGAAGCAGTTTCCA
ACTTTCTTTCCGGGTCTAATTCGCATTCTTMCTCCGCTCTTCCTTATCGC
CATTCATATTATCACCCTACACCCTACGCTGCCCCAAGTTATCATCATTC
AGCATCCTATGCACCAAGACCATTTAAGGCCATATTTCCCCAATCTCCCT
CTTATTCCATCAGAACCTCAGGATCTGTATCATCATCTACTCCAAAACCA
AATTCTGTAGAGGTTGCATTMCCTTCATMCCCGACAACACAGTCMCCMCC
ATCYCCTGCCTATCCTCGATMCCCCTCATACTCTCAATCAACAATCTACA
AGCCAGAAAAAACTGGATCTCCCTATTCATCATACTCGCATTCCTATTCA
AACTCACAATCCTTTGGATATTCAAGMCCAGCATCAMCTGCCGCTCACAC
TCATGAAGCTCTTACCCAAGCTGAAGCATMCCATTCTCCATCMCCTGCTM
CCCAAGCCTCGCCATACCATTCTCCCACACCTGTTCCCCAAGAACATCCC
TATACTCCACAACAGCAATCATCTCCTTACTCCTATAGAGTAAAATAATC
CATTTATTCATGCAATGACATAATGCCATAATAGCCTAATTATATAATGT
ATTCATTTGATTCCAGACACCCCAAAATAGCTACTATGAGGCATCCCAAC
CCACCGCCTACGAACCAGCACCTCCCTCAAAAGTAAGCAGTTATACAAAA
ACAATTGTGTAAAAATATCCTTAAATCTTACAGCCCGTACAATATTCTGG
ATATGAATTGAGGGGTGCATCACATGATTTATGCCCCTCTGCCTTGAGCT
GTGTTCCCAAGAAAAACTGTGACTTTAACGGAGTCATTGTGAGTCACGTT
GTTTCCACAAGCCCAGAATTTGATACCGTAAGAGTCCCACTCTTGGTAAG
TTAAGAAAATGAGAAACACATTTTTTTATAATTAAAAATGATTTTTTATG
TATTTCAATTAGCCATGTATCCACCCTCAAACTGGAAGTTCGAATGTTTG
TTGTCGAGATCCAAATTATGTAGACCCATACTCTCAGTATTAAATATCGC
CATAGAAATACTATTTGACTATATTAACACACTATATATCTATCCTTAAT
GTATCTAGTATAATGTACACATCTTTCTGTTTTGTTCGTAAAAAAAATAA
AAGTATATATGACAATCA
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