EMLSAG00000013038, EMLSAG00000013038-695804 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000013038
Unique Name	EMLSAG00000013038-695804
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000013038 vs. GO
Match: - (symbol:eri1 "exoribonuclease 1" species:7955 "Danio rerio" [GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337 Pfam:PF02037 SMART:SM00479 SMART:SM00513 Pfam:PF00929 ZFIN:ZDB-GENE-050522-39 GO:GO:0003676 GO:GO:0090305 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 OrthoDB:EOG7BGHM2 CTD:90459 HOGENOM:HOG000006635 HOVERGEN:HBG048925 OMA:FLNIQCR TreeFam:TF313449 EMBL:BX511222 EMBL:BC095343 EMBL:BC164140 RefSeq:NP_001018450.1 UniGene:Dr.15106 Ensembl:ENSDART00000065671 GeneID:553641 KEGG:dre:553641 InParanoid:Q503G0 NextBio:20880375 PRO:PR:Q503G0 Uniprot:Q503G0)

HSP 1 Score: 73.559 bits (179), Expect = 5.818e-15
Identity = 53/168 (31.55%), Postives = 81/168 (48.21%), Query Frame = 0

Query:    4 IKIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNLPNF---LVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEV----------------------------KTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +K+D  G+N V+R+RLK YY+++KL  +  A   +   F    V+D E TCEE N  +Y  EIIEFP VLI + T E+                            + V+ +  F  V K+ + WL+   L +KY +  +T        FL+ Q + S I +P++A K
Sbjct:   77 LKLDTRGVNDVLRKRLKSYYKKQKLMHSPAAEGNSDMYFDYICVVDFEATCEENNPPDYLHEIIEFPMVLIDTHTLEIVDSFQEYVKPVLHPQLSEFCVKLTGITQEMVDEAKTFHQVLKRAISWLQEKELGTKYKYMFLTDGSWDMGKFLHTQCKLSRIRYPQFARK 244

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BLAST of EMLSAG00000013038 vs. GO
Match: - (symbol:ERI1 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing complex" evidence=IEA] [GO:0071207 "histone pre-mRNA stem-loop binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513 Pfam:PF00929 GO:GO:0043022 GO:GO:0008408 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0031125 GeneTree:ENSGT00530000063205 OrthoDB:EOG7BGHM2 OMA:FLNIQCR TreeFam:TF313449 GO:GO:0071204 GO:GO:0071207 Ensembl:ENSSSCT00000031051 Uniprot:I3LQQ1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.041e-13
Identity = 49/169 (28.99%), Postives = 81/169 (47.93%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLE-EAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKT----------------------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +   K++  G+  V+++RLK YY+++KL  + G   +       +ID E TCEE N   +  EIIEFP VL+++ T E++                             V+ +D F  V KK + W++   L +KY +S++T        FL +Q R S + +P +A K
Sbjct:   52 LSEFKLETRGVKDVLKKRLKNYYKKQKLMLKEGSCADSYYDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCINLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCRLSRLKYPPFAKK 220

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BLAST of EMLSAG00000013038 vs. GO
Match: - (symbol:ERI1 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing complex" evidence=IEA] [GO:0071207 "histone pre-mRNA stem-loop binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513 Pfam:PF00929 GO:GO:0003676 Gene3D:1.10.720.30 GO:GO:0008408 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 KO:K01175 eggNOG:COG5018 GeneTree:ENSGT00530000063205 OrthoDB:EOG7BGHM2 CTD:90459 HOGENOM:HOG000006635 HOVERGEN:HBG048925 OMA:FLNIQCR TreeFam:TF313449 EMBL:AADN03003867 EMBL:AJ719933 RefSeq:NP_001006450.1 UniGene:Gga.2609 ProteinModelPortal:Q5ZL01 SMR:Q5ZL01 STRING:9031.ENSGALP00000018646 Ensembl:ENSGALT00000018669 GeneID:422629 KEGG:gga:422629 InParanoid:Q5ZL01 NextBio:20825234 PRO:PR:Q5ZL01 Uniprot:Q5ZL01)

HSP 1 Score: 67.0106 bits (162), Expect = 1.338e-12
Identity = 47/165 (28.48%), Postives = 79/165 (47.88%), Query Frame = 0

Query:    5 KIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNLPNFL-VIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKT----------------------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            K+D  G+  V+++RLK YY+++KL +       +  +++ V+D E TCEE N   +  EIIEFP VL+++ T E++                             V+ +D F  V +  + W+    L +KY++ ++T        FL +Q R S I  P +A K
Sbjct:   70 KLDTRGVKDVLKKRLKNYYKKQKLMQKEPVNGDSYYDYICVVDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVKPEINPKLSEFCVGLTGITQDIVDKADTFPQVLQNVVDWMRQRELGTKYSYCMLTDGSWDMSKFLNIQCRVSRIKHPSFAKK 234

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BLAST of EMLSAG00000013038 vs. GO
Match: - (symbol:Eri1 "exoribonuclease 1" species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0031125 "rRNA 3'-end processing" evidence=IDA] [GO:0043022 "ribosome binding" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing complex" evidence=IDA] [GO:0071207 "histone pre-mRNA stem-loop binding" evidence=IDA] [GO:0090305 "nucleic acid phosphodiester bond hydrolysis" evidence=ISO] InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513 Pfam:PF00929 MGI:MGI:1914526 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0043022 GO:GO:0008408 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0031047 GO:GO:0019843 KO:K01175 GO:GO:0031125 eggNOG:COG5018 GeneTree:ENSGT00530000063205 OrthoDB:EOG7BGHM2 CTD:90459 HOGENOM:HOG000006635 HOVERGEN:HBG048925 TreeFam:TF313449 GO:GO:0071204 GO:GO:0071207 EMBL:AK014041 EMBL:AK014410 EMBL:AK050230 EMBL:AK165026 EMBL:AK172005 EMBL:BC046412 RefSeq:NP_080343.4 UniGene:Mm.207534 ProteinModelPortal:Q7TMF2 SMR:Q7TMF2 BioGrid:212065 DIP:DIP-60112N MINT:MINT-1861762 PhosphoSite:Q7TMF2 PaxDb:Q7TMF2 PRIDE:Q7TMF2 Ensembl:ENSMUST00000033927 GeneID:67276 KEGG:mmu:67276 UCSC:uc009lky.2 InParanoid:Q3TNT0 NextBio:324080 PRO:PR:Q7TMF2 Bgee:Q7TMF2 CleanEx:MM_THEX1 Genevestigator:Q7TMF2 Uniprot:Q7TMF2)

HSP 1 Score: 66.6254 bits (161), Expect = 2.032e-12
Identity = 47/169 (27.81%), Postives = 83/169 (49.11%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNLPNFL-VIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKT----------------------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +   K++  G+  V+++RLK YY+++KL     +   +  +++ +ID E TCEE N + +  EIIEFP VL+++ T E++                             V+ +D F  V KK + W+++  L +KY + ++T        FL +Q R S +  P +A K
Sbjct:   84 LSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESSAGDSYYDYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQCRLSRLKHPAFAKK 252

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BLAST of EMLSAG00000013038 vs. GO
Match: - (symbol:ERI1 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing complex" evidence=IEA] [GO:0071207 "histone pre-mRNA stem-loop binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513 Pfam:PF00929 GO:GO:0043022 GO:GO:0008408 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0031125 GeneTree:ENSGT00530000063205 OrthoDB:EOG7BGHM2 CTD:90459 OMA:FLNIQCR TreeFam:TF313449 GO:GO:0071204 GO:GO:0071207 RefSeq:XP_539997.2 ProteinModelPortal:E2QU14 Ensembl:ENSCAFT00000010754 GeneID:482882 KEGG:cfa:482882 NextBio:20857381 Uniprot:E2QU14)

HSP 1 Score: 66.6254 bits (161), Expect = 2.428e-12
Identity = 48/169 (28.40%), Postives = 81/169 (47.93%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLE-EAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKT----------------------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +   K++  G+  V+++RLK YY+++KL  + G  ++       +ID E TCEE N   +  EIIEFP VL+++ T E++                             V+ +D F  V KK + W++   L +KY + ++T        FL +Q R S + +P +A K
Sbjct:   88 LSEFKLETRGVKDVLKKRLKNYYKKQKLMLKEGNCVDSYYDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPELNTQLSDFCINLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCRLSRLKYPPFAKK 256

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BLAST of EMLSAG00000013038 vs. GO
Match: - (symbol:ERI1 "3'-5' exoribonuclease 1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS;IDA] [GO:0008408 "3'-5' exonuclease activity" evidence=IDA] [GO:0019843 "rRNA binding" evidence=ISS] [GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0031125 "rRNA 3'-end processing" evidence=ISS] [GO:0043022 "ribosome binding" evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing complex" evidence=ISS] [GO:0071207 "histone pre-mRNA stem-loop binding" evidence=ISS] [GO:0090305 "nucleic acid phosphodiester bond hydrolysis" evidence=IDA] [GO:0071044 "histone mRNA catabolic process" evidence=IMP] InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513 Pfam:PF00929 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 DrugBank:DB00131 GO:GO:0043022 GO:GO:0008408 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0031047 GO:GO:0019843 KO:K01175 GO:GO:0031125 eggNOG:COG5018 OrthoDB:EOG7BGHM2 EMBL:AY310909 EMBL:AK291062 EMBL:AL137679 EMBL:BC035279 PIR:T46432 RefSeq:NP_699163.2 UniGene:Hs.20000 PDB:1W0H PDB:1ZBH PDB:1ZBU PDB:4L8R PDBsum:1W0H PDBsum:1ZBH PDBsum:1ZBU PDBsum:4L8R ProteinModelPortal:Q8IV48 SMR:Q8IV48 BioGrid:124718 STRING:9606.ENSP00000250263 PhosphoSite:Q8IV48 DMDM:45476938 PaxDb:Q8IV48 PeptideAtlas:Q8IV48 PRIDE:Q8IV48 DNASU:90459 Ensembl:ENST00000250263 Ensembl:ENST00000519292 Ensembl:ENST00000523898 GeneID:90459 KEGG:hsa:90459 UCSC:uc003wsk.2 CTD:90459 GeneCards:GC08P008900 HGNC:HGNC:23994 HPA:CAB033838 MIM:608739 neXtProt:NX_Q8IV48 PharmGKB:PA164719226 HOGENOM:HOG000006635 HOVERGEN:HBG048925 InParanoid:Q8IV48 OMA:FLNIQCR PhylomeDB:Q8IV48 TreeFam:TF313449 EvolutionaryTrace:Q8IV48 GenomeRNAi:90459 NextBio:76770 PRO:PR:Q8IV48 ArrayExpress:Q8IV48 Bgee:Q8IV48 CleanEx:HS_ERI1 Genevestigator:Q8IV48 GO:GO:0071204 GO:GO:0071207 Uniprot:Q8IV48)

HSP 1 Score: 66.6254 bits (161), Expect = 2.758e-12
Identity = 50/170 (29.41%), Postives = 83/170 (48.82%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKL--EEAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKT----------------------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +   K++  G+  V+++RLK YY+++KL  +E+  A +       +ID E TCEE N   +  EIIEFP VL+++ T E++                             V+ +D F  V KK + W++   L +KY +SL+T        FL +Q + S + +P +A K
Sbjct:   88 LSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESNFA-DSYYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKK 256

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BLAST of EMLSAG00000013038 vs. GO
Match: - (symbol:Eri1 "3'-5' exoribonuclease 1" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008408 "3'-5' exonuclease activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS] [GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0031125 "rRNA 3'-end processing" evidence=ISS] [GO:0043022 "ribosome binding" evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing complex" evidence=ISS] [GO:0071207 "histone pre-mRNA stem-loop binding" evidence=ISS] [GO:0090305 "nucleic acid phosphodiester bond hydrolysis" evidence=ISS] [GO:0071044 "histone mRNA catabolic process" evidence=ISS] InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513 Pfam:PF00929 RGD:1308378 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0043022 GO:GO:0008408 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0031047 GO:GO:0019843 KO:K01175 GO:GO:0031125 eggNOG:COG5018 GeneTree:ENSGT00530000063205 OrthoDB:EOG7BGHM2 CTD:90459 HOGENOM:HOG000006635 HOVERGEN:HBG048925 OMA:FLNIQCR TreeFam:TF313449 GO:GO:0071204 GO:GO:0071207 EMBL:BC089828 RefSeq:NP_001014165.1 UniGene:Rn.17469 ProteinModelPortal:Q5FVR4 SMR:Q5FVR4 STRING:10116.ENSRNOP00000015239 PRIDE:Q5FVR4 Ensembl:ENSRNOT00000015239 GeneID:361159 KEGG:rno:361159 UCSC:RGD:1308378 InParanoid:Q5FVR4 NextBio:675391 PRO:PR:Q5FVR4 Genevestigator:Q5FVR4 Uniprot:Q5FVR4)

HSP 1 Score: 65.4698 bits (158), Expect = 5.807e-12
Identity = 46/169 (27.22%), Postives = 83/169 (49.11%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLE-EAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKT----------------------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +   K++  G+  V+++RLK YY+++KL  +   A++       +ID E TCEE N + +  EIIEFP VL+++ + E++                             V+ +D F  V KK + W+++  L +KY + ++T        FL +Q + S + +P +A K
Sbjct:   84 LSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESNAVDSYYDYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQLSRLKYPSFAKK 252

[Close]

BLAST of EMLSAG00000013038 vs. GO
Match: - (symbol:Eri1 "exoribonuclease 1" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0008408 "3'-5' exonuclease activity" evidence=ISO;ISS] [GO:0019843 "rRNA binding" evidence=ISO;ISS] [GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0031125 "rRNA 3'-end processing" evidence=ISO;ISS] [GO:0043022 "ribosome binding" evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process" evidence=ISO;ISS] [GO:0071204 "histone pre-mRNA 3'end processing complex" evidence=ISO;ISS] [GO:0071207 "histone pre-mRNA stem-loop binding" evidence=ISO;ISS] [GO:0090305 "nucleic acid phosphodiester bond hydrolysis" evidence=ISO;ISS] InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513 Pfam:PF00929 RGD:1308378 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0043022 GO:GO:0008408 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0031047 GO:GO:0019843 KO:K01175 GO:GO:0031125 eggNOG:COG5018 GeneTree:ENSGT00530000063205 OrthoDB:EOG7BGHM2 CTD:90459 HOGENOM:HOG000006635 HOVERGEN:HBG048925 OMA:FLNIQCR TreeFam:TF313449 GO:GO:0071204 GO:GO:0071207 EMBL:BC089828 RefSeq:NP_001014165.1 UniGene:Rn.17469 ProteinModelPortal:Q5FVR4 SMR:Q5FVR4 STRING:10116.ENSRNOP00000015239 PRIDE:Q5FVR4 Ensembl:ENSRNOT00000015239 GeneID:361159 KEGG:rno:361159 UCSC:RGD:1308378 InParanoid:Q5FVR4 NextBio:675391 PRO:PR:Q5FVR4 Genevestigator:Q5FVR4 Uniprot:Q5FVR4)

HSP 1 Score: 65.4698 bits (158), Expect = 5.807e-12
Identity = 46/169 (27.22%), Postives = 83/169 (49.11%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLE-EAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKT----------------------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +   K++  G+  V+++RLK YY+++KL  +   A++       +ID E TCEE N + +  EIIEFP VL+++ + E++                             V+ +D F  V KK + W+++  L +KY + ++T        FL +Q + S + +P +A K
Sbjct:   84 LSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESNAVDSYYDYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQLSRLKYPSFAKK 252

[Close]

BLAST of EMLSAG00000013038 vs. GO
Match: - (symbol:THEX1 "Three prime histone mRNA exonuclease 1" species:9913 "Bos taurus" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513 Pfam:PF00929 GO:GO:0003676 GO:GO:0090305 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 OrthoDB:EOG7BGHM2 CTD:90459 HOVERGEN:HBG048925 OMA:FLNIQCR TreeFam:TF313449 EMBL:DAAA02060421 EMBL:BC109681 RefSeq:NP_001033281.1 UniGene:Bt.22450 SMR:Q32LA2 Ensembl:ENSBTAT00000012775 GeneID:540728 KEGG:bta:540728 InParanoid:Q32LA2 NextBio:20878798 Uniprot:Q32LA2)

HSP 1 Score: 64.3142 bits (155), Expect = 1.520e-11
Identity = 49/170 (28.82%), Postives = 83/170 (48.82%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKL--EEAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKT----------------------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +   K++  G+  V+++RLK YY+++KL  +E+  A +       +ID E TCEE N   +  EIIEFP VL+++ T E++                             V+ +D F  V KK + W++   L +KY +S++T        FL +Q + S + +P +A K
Sbjct:   88 LSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESNCA-DSYYDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCINLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLSRLKYPPFAKK 256

[Close]

BLAST of EMLSAG00000013038 vs. GO
Match: - (symbol:ERI1 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513 Pfam:PF00929 GO:GO:0003676 GO:GO:0090305 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 OrthoDB:EOG7BGHM2 TreeFam:TF313449 EMBL:DAAA02070439 Ensembl:ENSBTAT00000064195 OMA:WISIQKS Uniprot:G3MZQ7)

HSP 1 Score: 60.077 bits (144), Expect = 4.148e-10
Identity = 48/170 (28.24%), Postives = 81/170 (47.65%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKL--EEAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKT----------------------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +   K++  G+  V+++RLK YY++ KL  +E+  A +       +ID E TCEE N   +  EIIEF  VL+++ T E++                             V+ +D F  V KK + W++   L +KY +S++T        FL +Q + S + +P +A K
Sbjct:   88 LSEFKLETTGVKDVLKKRLKNYYKKLKLMLKESNCA-DSYYDYICIIDFEATCEEGNPPEFIHEIIEFSVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCINLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLSRLKYPPFAKK 256

[Close]

BLAST of EMLSAG00000013038 vs. C. finmarchicus
Match: gi|592830977|gb|GAXK01126567.1| (TSA: Calanus finmarchicus comp46182_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 58.5362 bits (140), Expect = 5.631e-10
Identity = 43/128 (33.59%), Postives = 61/128 (47.66%), Query Frame = 0

Query:   42 FLVIDIETTCEELNYSNYKQEIIEFPAVLISS------------------------CTA----EVKTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVTYEG------FLYLQPRQSSIAFPEYASK 135
            F+VID E TCEE N  +Y  EIIEFP V++                          CTA    E +TV+A++ F  V ++   WLE   L + + F+LVT +G      FL L  +Q+ +  P +A K
Sbjct:  438 FIVIDFEATCEERNLPDYPHEIIEFPCVIVDGKTGKIVDSWREYCRPTINPTLSEFCTALTGIEQQTVDAAETFPEVLEQFNFWLEEKCLGTAHTFALVT-DGPFDVGRFLRLSCQQAELEVPVWAEK 818

[Close]

BLAST of EMLSAG00000013038 vs. C. finmarchicus
Match: gi|592812297|gb|GAXK01142271.1| (TSA: Calanus finmarchicus comp101697_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 9.022e-3
Identity = 22/49 (44.90%), Postives = 28/49 (57.14%), Query Frame = 0

Query:   36 NRNLPN------FLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEV 78
            N+NL N       LVID E+TC     ++   EIIEFP VL+S  T +V
Sbjct:  106 NKNLDNKQKLEYILVIDFESTCWSEKANSPSPEIIEFPVVLLSLTTGKV 252

[Close]

BLAST of EMLSAG00000013038 vs. C. finmarchicus
Match: gi|592812298|gb|GAXK01142270.1| (TSA: Calanus finmarchicus comp101697_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 9.432e-3
Identity = 22/49 (44.90%), Postives = 28/49 (57.14%), Query Frame = 0

Query:   36 NRNLPN------FLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEV 78
            N+NL N       LVID E+TC     ++   EIIEFP VL+S  T +V
Sbjct:  106 NKNLDNKQKLEYILVIDFESTCWSEKANSPSPEIIEFPVVLLSLTTGKV 252

[Close]

BLAST of EMLSAG00000013038 vs. C. finmarchicus
Match: gi|592835362|gb|GAXK01122182.1| (TSA: Calanus finmarchicus comp106155_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 7.851e-1
Identity = 17/42 (40.48%), Postives = 24/42 (57.14%), Query Frame = 0

Query:   37 RNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEV 78
            +N   FLV+D E  C++       QEIIEFP +++ S T  V
Sbjct:  504 QNFQYFLVLDFEANCQK-GVRLDPQEIIEFPCLMVESQTFRV 626

[Close]

BLAST of EMLSAG00000013038 vs. L. salmonis peptides
Match: EMLSAP00000013038 (pep:novel supercontig:LSalAtl2s:LSalAtl2s99:536211:538448:1 gene:EMLSAG00000013038 transcript:EMLSAT00000013038 description:"maker-LSalAtl2s99-snap-gene-5.21")

HSP 1 Score: 278.485 bits (711), Expect = 3.532e-97
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVTYEGFLYLQPRQSSIAFPEYASK 135
            MKNIKIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVTYEGFLYLQPRQSSIAFPEYASK
Sbjct:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVTYEGFLYLQPRQSSIAFPEYASK 135

[Close]

BLAST of EMLSAG00000013038 vs. L. salmonis peptides
Match: EMLSAP00000000411 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1064:45136:46089:1 gene:EMLSAG00000000411 transcript:EMLSAT00000000411 description:"snap_masked-LSalAtl2s1064-processed-gene-0.7")

HSP 1 Score: 172.555 bits (436), Expect = 2.040e-53
Identity = 98/162 (60.49%), Postives = 107/162 (66.05%), Query Frame = 0

Query:    2 KNIKIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEV----------------------------KTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVTYEGFLYLQPRQSSIAFPEYASK 135
            K++KIDP G NYVV++RLKEYY+REK EEAGLA+NRN+  F+VID E TCEE N SNYK EIIEFPAVLISS TAEV                            KTVNASDPFLIVH K L WLENHGL     F +     FLYLQ R SSIAFPEYASK
Sbjct:   32 KDVKIDPRGHNYVVKRRLKEYYKREKXEEAGLAVNRNVHYFVVIDFEATCEERNPSNYKHEIIEFPAVLISSRTAEVVDTFHEYIRPLINPNLSTFCKNLTGISQKTVNASDPFLIVHDKFLNWLENHGL-GNGPFDMGR---FLYLQTRHSSIAFPEYASK 189

[Close]

BLAST of EMLSAG00000013038 vs. L. salmonis peptides
Match: EMLSAP00000008014 (pep:novel supercontig:LSalAtl2s:LSalAtl2s477:239812:271012:-1 gene:EMLSAG00000008014 transcript:EMLSAT00000008014 description:"augustus_masked-LSalAtl2s477-processed-gene-2.0")

HSP 1 Score: 95.9005 bits (237), Expect = 4.789e-25
Identity = 66/143 (46.15%), Postives = 74/143 (51.75%), Query Frame = 0

Query:   35 INRNLPNFLVIDIETTCEELNY--------SNYKQEIIEFPAVLISSCTAEV----------------------------KTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVTYEG------FLYLQPRQSSIAFPEYASK 135
            I+  + N   +  E T +E N          NYK EIIEFPAVLISS T EV                            KTV ASDPFLIVH K L WL NHGL ++Y FSLVT +G      F+ LQ R SSIAFPEYASK
Sbjct:   77 ISNQMTNEFFLHFEATSKERNLLTKHVIIKRNYKHEIIEFPAVLISSRTVEVVDXFLEYIRPFINPNLSTFCKNLTGISQKTVIASDPFLIVHDKFLNWLVNHGLGNEYTFSLVT-DGPLDIGTFIILQTRPSSIAFPEYASK 218

[Close]

BLAST of EMLSAG00000013038 vs. SwissProt
Match: gi|45476845|sp|Q7TMF2.2|ERI1_MOUSE (RecName: Full=3'-5' exoribonuclease 1; AltName: Full=3'-5' exonuclease ERI1; AltName: Full=Eri-1 homolog; AltName: Full=Histone mRNA 3'-exonuclease 1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.680e-13
Identity = 47/169 (27.81%), Postives = 83/169 (49.11%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNLPNFL-VIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKT----------------------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +   K++  G+  V+++RLK YY+++KL     +   +  +++ +ID E TCEE N + +  EIIEFP VL+++ T E++                             V+ +D F  V KK + W+++  L +KY + ++T        FL +Q R S +  P +A K
Sbjct:   84 LSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESSAGDSYYDYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQCRLSRLKHPAFAKK 252

[Close]

BLAST of EMLSAG00000013038 vs. SwissProt
Match: gi|45476938|sp|Q8IV48.3|ERI1_HUMAN (RecName: Full=3'-5' exoribonuclease 1; AltName: Full=3'-5' exonuclease ERI1; AltName: Full=Eri-1 homolog; AltName: Full=Histone mRNA 3'-end-specific exoribonuclease; AltName: Full=Histone mRNA 3'-exonuclease 1; AltName: Full=Protein 3'hExo; Short=HEXO)

HSP 1 Score: 66.6254 bits (161), Expect = 1.160e-12
Identity = 50/170 (29.41%), Postives = 83/170 (48.82%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKL--EEAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKT----------------------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +   K++  G+  V+++RLK YY+++KL  +E+  A +       +ID E TCEE N   +  EIIEFP VL+++ T E++                             V+ +D F  V KK + W++   L +KY +SL+T        FL +Q + S + +P +A K
Sbjct:   88 LSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESNFA-DSYYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKK 256

[Close]

BLAST of EMLSAG00000013038 vs. SwissProt
Match: gi|78098993|sp|Q5FVR4.1|ERI1_RAT (RecName: Full=3'-5' exoribonuclease 1; AltName: Full=Histone mRNA 3'-exonuclease 1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.494e-12
Identity = 46/169 (27.22%), Postives = 83/169 (49.11%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLE-EAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKT----------------------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +   K++  G+  V+++RLK YY+++KL  +   A++       +ID E TCEE N + +  EIIEFP VL+++ + E++                             V+ +D F  V KK + W+++  L +KY + ++T        FL +Q + S + +P +A K
Sbjct:   84 LSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESNAVDSYYDYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQLSRLKYPSFAKK 252

[Close]

BLAST of EMLSAG00000013038 vs. Select Arthropod Genomes
Match: EFX88921.1 (hypothetical protein DAPPUDRAFT_311056 [Daphnia pulex])

HSP 1 Score: 67.781 bits (164), Expect = 2.076e-13
Identity = 61/173 (35.26%), Postives = 85/173 (49.13%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKL------EEAGLAINRNLPNF-LVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKTVNAS------DPFLI-------------VHKKCLI---------WLENHGLRSKYAFSLVTYEG------FLYLQPRQSSIAFPEY 132
            +K +K+D  G   V+ +RLK +Y++  L      E+ G +  R L +F ++ID E TCE L +SN+KQEIIEFPAVL++    EV+    S      +P L              V K  L          WL+   L SKY+F++VT +G      FL  Q   S I FP Y
Sbjct:   68 LKMLKLDTDGSRSVLAKRLKTFYKKTMLSVSGIQEKNGNSKIRILFDFYVIIDYEATCELLKHSNFKQEIIEFPAVLLNCQKGEVEDEFRSYCRPVLNPLLTEFCTELTGITQDDVDKAPLFHEVLTSFEEWLQKKKLGSKYSFAIVT-DGPWDIGYFLKNQCALSKIEFPTY 239

[Close]

BLAST of EMLSAG00000013038 vs. nr
Match: gi|646700579|gb|KDR10689.1| (3'-5' exoribonuclease 1 [Zootermopsis nevadensis])

HSP 1 Score: 86.6557 bits (213), Expect = 1.371e-17
Identity = 57/170 (33.53%), Postives = 89/170 (52.35%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLEEAGLAIN-RNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEV----------------------------KTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVTYEG------FLYLQPRQSSIAFPEYASK 135
            +K +K+   G   V++ RLK YY+++KL+ A L    + LP ++++D E TCE +N  +Y  EIIEFPAVL+S+   +V                            + V+A+D F  V K    WL  H L SK+ F++VT +G      F+Y Q + S +A+P++A K
Sbjct:   48 LKRLKLSSEGNCDVLKTRLKNYYKKQKLKSANLPTAVKLLPYYVIVDFEATCEGVNVPDYPHEIIEFPAVLVSTEQQQVVDHFQAYCRPLVNPTLSGFCMELTGISQEEVDAADTFPQVLKDFEAWLAKHKLGSKHKFTIVT-DGPWDMGRFMYGQCKISGLAYPQFAKK 216

[Close]

BLAST of EMLSAG00000013038 vs. nr
Match: gi|727064334|ref|XP_010410085.1| (PREDICTED: 3'-5' exoribonuclease 1 isoform X2 [Corvus cornix cornix] >gi|1049421805|ref|XP_017592256.1| PREDICTED: 3'-5' exoribonuclease 1 isoform X2 [Corvus brachyrhynchos])

HSP 1 Score: 83.5741 bits (205), Expect = 4.982e-17
Identity = 47/137 (34.31%), Postives = 80/137 (58.39%), Query Frame = 0

Query:    5 KIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNLPNFL-VIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            K++  G+  V+++RLK YY+++KL +       +  +++ V+D E TCEE N   +  EIIEFP VL+++ T E+  V+ +D F  V +  + W+    L +KY++S++T        FL +Q R S I +P +A K
Sbjct:   14 KLETRGVKDVLKKRLKNYYKKQKLMQKEHTNGNSCYDYICVVDFEATCEEGNPPEFVHEIIEFPVVLVNTRTLEIDIVDKADTFPQVLQNVVEWMRQRELGTKYSYSMLTDGSWDMSKFLNIQCRISRIKYPSFAKK 150

[Close]

BLAST of EMLSAG00000013038 vs. nr
Match: gi|1095969811|ref|XP_018782279.1| (PREDICTED: 3'-5' exoribonuclease 1 isoform X2 [Serinus canaria])

HSP 1 Score: 82.4185 bits (202), Expect = 1.219e-16
Identity = 47/137 (34.31%), Postives = 80/137 (58.39%), Query Frame = 0

Query:    5 KIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNLPNFL-VIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            K++  G+  V+++RLK YY+++KL +       +  +++ V+D E TCEE N   +  EIIEFP VL+++ T E+  V+ +D F  V +  + W+    L +KY++S++T        FL +Q R S I +P +A K
Sbjct:   14 KLETRGVKDVLKKRLKNYYKKQKLMQKEHISGDSCYDYICVVDFEATCEEGNPPEFVHEIIEFPIVLVNTRTLEIDIVDKADIFPQVLQNVIDWMRQRELGTKYSYSMLTDGSWDMSKFLNIQCRISRIKYPSFAKK 150

[Close]

BLAST of EMLSAG00000013038 vs. nr
Match: gi|426204660|gb|AFY13248.1| (ERI1 exoribonuclease 3-like protein, partial [Schistocerca gregaria])

HSP 1 Score: 81.6481 bits (200), Expect = 1.285e-16
Identity = 54/170 (31.76%), Postives = 86/170 (50.59%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNL-PNFLVIDIETTCEELNYSNYKQEIIEFPAVLISS------------CTAEVKT----------------VNASDPFLIVHKKCLIWLENHGLRSKYAFSLVTYEG------FLYLQPRQSSIAFPEYASK 135
            M+ +++   G   V+++RLK YY++ KL    +  +  L P ++++D E TCEE+N  +Y  EIIEFPAVL++S            C   VK+                V+ ++ F  V  +   WL  HGL +KY +++VT +G      FLY Q + S I +P +  K
Sbjct:   13 MRGLRLSTEGSTDVLKKRLKNYYKKRKLATINVTSSHKLYPYYVIVDFEATCEEVNPPDYPHEIIEFPAVLVNSEKQEIEDCFQSYCRPTVKSTLSKFCTELTGITQEQVDKAETFPEVLSRFEAWLVEHGLGTKYKYAIVT-DGPWDMGRFLYGQCQLSGIPYPSFGKK 181

[Close]

BLAST of EMLSAG00000013038 vs. nr
Match: gi|444516848|gb|ELV11300.1| (Tankyrase-1 [Tupaia chinensis])

HSP 1 Score: 84.3445 bits (207), Expect = 2.368e-16
Identity = 50/133 (37.59%), Postives = 77/133 (57.89%), Query Frame = 0

Query:   10 GLNYVVRQRLKEYYEREKL--EEAGLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            G+  V+R+RLK YY+++KL  +E+G   +       VID E TCEE N   +  EIIEFP VL+++ T E+  V+ +D F  V KK   W++   L +KY +S++T        FL +Q + S + +P +A K
Sbjct:   14 GVKDVLRKRLKNYYKKQKLMLKESGRP-DSYYDYICVIDFEATCEEGNPPEFTHEIIEFPIVLLNTHTLEIDQVDRADTFPQVLKKVTDWMKLKELGTKYKYSILTDGSWDMSKFLNMQCQLSRLRYPSFAKK 145

[Close]

BLAST of EMLSAG00000013038 vs. nr
Match: gi|573878111|ref|XP_006627290.1| (PREDICTED: 3'-5' exoribonuclease 1 [Lepisosteus oculatus])

HSP 1 Score: 81.2629 bits (199), Expect = 1.309e-15
Identity = 53/172 (30.81%), Postives = 88/172 (51.16%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNLPNF----LVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEV----------------------------KTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +  +K++  G   V+++RLK YY+++KL +A +  N +   +     V+D E TCEE N  +Y  EIIEFP VL+++ T E+                            KTV+ +D F  V +K + WL++  L +KY ++++T        FL +Q R S I +P++A K
Sbjct:   78 LSELKLETRGAKDVLKKRLKNYYKKQKLMQAVVTENSSTDTYYDYICVVDFEATCEENNPPDYLHEIIEFPMVLVNTHTLEIEDTFQEYVKPEINTNLSDFCVQLTGITQKTVDGADTFPTVLQKVVDWLQSKELGTKYKYAVLTDGAWDMSKFLNIQCRISRIRYPQFAKK 249

[Close]

BLAST of EMLSAG00000013038 vs. nr
Match: gi|929411239|ref|XP_014114881.1| (PREDICTED: 3'-5' exoribonuclease 1 isoform X2 [Pseudopodoces humilis])

HSP 1 Score: 80.4925 bits (197), Expect = 1.748e-15
Identity = 46/137 (33.58%), Postives = 79/137 (57.66%), Query Frame = 0

Query:    5 KIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRNLPNFL-VIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEVKTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            K++  G+  V+++RLK YY+++KL +       +  +++ V+D E TCEE N   +  EIIEFP VL+++ T E+  V+ +D F  V +  + W+    L +KY++ ++T        FL +Q R S I +P +A K
Sbjct:   80 KLETRGVKDVLKKRLKNYYKKQKLMQKEHISGDSCYDYICVVDFEATCEEGNPPEFVHEIIEFPVVLVNTRTLEIDVVDKADIFPQVLQNVIEWMRQRELGTKYSYCMLTDGSWDMSKFLNIQCRISRIKYPSFAKK 216

[Close]

BLAST of EMLSAG00000013038 vs. nr
Match: gi|348521266|ref|XP_003448147.1| (PREDICTED: 3'-5' exoribonuclease 1 [Oreochromis niloticus])

HSP 1 Score: 80.4925 bits (197), Expect = 2.178e-15
Identity = 52/171 (30.41%), Postives = 86/171 (50.29%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLEEA---GLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEV----------------------------KTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +  +K+D  G+  V+++RLK +Y+++KL +    G   +       V+D E TCEE N S++  EIIEFP VLI++ T E+                            K V+ +DPF +V ++ + WL+   L +KY ++++T        FL +Q R S I +P +A K
Sbjct:   78 LAELKLDTRGVKDVMKKRLKSHYKKQKLMQTAAEGGPTDTYYDYICVVDFEATCEEDNPSDFLHEIIEFPMVLINTHTLEIVDTFQEYVKPELNPQLSDFCVKLTGITQKMVDEADPFPVVLQRVVSWLQERELGTKYKYAILTDGSWDMSKFLNIQCRVSRIKYPPFAKK 248

[Close]

BLAST of EMLSAG00000013038 vs. nr
Match: gi|1042305084|ref|XP_017348954.1| (PREDICTED: 3'-5' exoribonuclease 1 [Ictalurus punctatus])

HSP 1 Score: 79.7221 bits (195), Expect = 3.529e-15
Identity = 52/165 (31.52%), Postives = 83/165 (50.30%), Query Frame = 0

Query:    4 IKIDPCGLNYVVRQRLKEYYEREKLEEAGLAINRN--LPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEV----------------------------KTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYA 133
            +K+D  G+  V+++RLK YY+++KL+++  A +         V+D E TCEE N  N+  EIIEFP VLI   T E+                            K V+ +DPF  V ++ + WL+   L +KY ++L+T        FL+ Q R S + +P++A
Sbjct:   74 LKLDTRGVKDVLKKRLKNYYKKQKLKQSATAGSDGSYYDYICVVDFEATCEENNPRNFIHEIIEFPMVLIDMHTLEIVDSFQEYVKPQLNPKLSDFCVELTGITQKMVDEADPFPRVLRRVVDWLQEKELGTKYKYTLLTDGSWDMSKFLHTQCRLSRLRYPQFA 238

[Close]

BLAST of EMLSAG00000013038 vs. nr
Match: gi|499046429|ref|XP_004573791.1| (PREDICTED: 3'-5' exoribonuclease 1 [Maylandia zebra])

HSP 1 Score: 79.7221 bits (195), Expect = 4.423e-15
Identity = 52/171 (30.41%), Postives = 85/171 (49.71%), Query Frame = 0

Query:    1 MKNIKIDPCGLNYVVRQRLKEYYEREKLEEA---GLAINRNLPNFLVIDIETTCEELNYSNYKQEIIEFPAVLISSCTAEV----------------------------KTVNASDPFLIVHKKCLIWLENHGLRSKYAFSLVT-----YEGFLYLQPRQSSIAFPEYASK 135
            +  +K+D  G+  V+++RLK +Y+++KL +    G   +       V+D E TCEE N S++  EIIEFP VLI++ T E+                            K V  +DPF +V ++ + WL+   L +KY ++++T        FL +Q R S I +P +A K
Sbjct:   78 LAELKLDTRGVKDVMKKRLKSHYKKQKLMQTAAEGGPTDTYYDYICVVDFEATCEEDNPSDFLHEIIEFPMVLINTHTLEIVDTFQEYVKPELNPQLSDFCVKLTGITQKMVEEADPFPVVLQRVVSWLQKRELGTKYKYAILTDGSWDMSKFLNIQCRVSRIKYPPFAKK 248

The following BLAST results are available for this feature:

BLAST of EMLSAG00000013038 vs. GO
BLAST of EMLSAG00000013038 vs. C. finmarchicus
BLAST of EMLSAG00000013038 vs. L. salmonis peptides
BLAST of EMLSAG00000013038 vs. SwissProt
BLAST of EMLSAG00000013038 vs. Select Arthropod Genomes
BLAST of EMLSAG00000013038 vs. nr
BLAST of EMLSAG00000013038 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000013038 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 11


Match Name	E-value	Identity	Description
-	5.818e-15	31.55	symbol:eri1 "exoribonuclease 1" species:7955 "Dani...	[more]
-	4.041e-13	28.99	symbol:ERI1 "Uncharacterized protein" species:9823...	[more]
-	1.338e-12	28.48	symbol:ERI1 "Uncharacterized protein" species:9031...	[more]
-	2.032e-12	27.81	symbol:Eri1 "exoribonuclease 1" species:10090 "Mus...	[more]
-	2.428e-12	28.40	symbol:ERI1 "Uncharacterized protein" species:9615...	[more]
-	2.758e-12	29.41	symbol:ERI1 "3'-5' exoribonuclease 1" species:9606...	[more]
-	5.807e-12	27.22	symbol:Eri1 "3'-5' exoribonuclease 1" species:1011...	[more]
-	5.807e-12	27.22	symbol:Eri1 "exoribonuclease 1" species:10116 "Rat...	[more]
-	1.520e-11	28.82	symbol:THEX1 "Three prime histone mRNA exonuclease...	[more]
-	4.148e-10	28.24	symbol:ERI1 "Uncharacterized protein" species:9913...	[more]

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BLAST of EMLSAG00000013038 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 4


Match Name	E-value	Identity	Description
gi\|592830977\|gb\|GAXK01126567.1\|	5.631e-10	33.59	TSA: Calanus finmarchicus comp46182_c0_seq1 transc...	[more]
gi\|592812297\|gb\|GAXK01142271.1\|	9.022e-3	44.90	TSA: Calanus finmarchicus comp101697_c0_seq2 trans...	[more]
gi\|592812298\|gb\|GAXK01142270.1\|	9.432e-3	44.90	TSA: Calanus finmarchicus comp101697_c0_seq1 trans...	[more]
gi\|592835362\|gb\|GAXK01122182.1\|	7.851e-1	40.48	TSA: Calanus finmarchicus comp106155_c1_seq1 trans...	[more]

BLAST of EMLSAG00000013038 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3


Match Name	E-value	Identity	Description
EMLSAP00000013038	3.532e-97	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s99:536211...	[more]
EMLSAP00000000411	2.040e-53	60.49	pep:novel supercontig:LSalAtl2s:LSalAtl2s1064:4513...	[more]
EMLSAP00000008014	4.789e-25	46.15	pep:novel supercontig:LSalAtl2s:LSalAtl2s477:23981...	[more]

BLAST of EMLSAG00000013038 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
gi\|45476845\|sp\|Q7TMF2.2\|ERI1_MOUSE	8.680e-13	27.81	RecName: Full=3'-5' exoribonuclease 1; AltName: Fu...	[more]
gi\|45476938\|sp\|Q8IV48.3\|ERI1_HUMAN	1.160e-12	29.41	RecName: Full=3'-5' exoribonuclease 1; AltName: Fu...	[more]
gi\|78098993\|sp\|Q5FVR4.1\|ERI1_RAT	2.494e-12	27.22	RecName: Full=3'-5' exoribonuclease 1; AltName: Fu...	[more]

BLAST of EMLSAG00000013038 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1


Match Name	E-value	Identity	Description
EFX88921.1	2.076e-13	35.26	hypothetical protein DAPPUDRAFT_311056 [Daphnia pu...	[more]

BLAST of EMLSAG00000013038 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|646700579\|gb\|KDR10689.1\|	1.371e-17	33.53	3'-5' exoribonuclease 1 [Zootermopsis nevadensis]	[more]
gi\|727064334\|ref\|XP_010410085.1\|	4.982e-17	34.31	PREDICTED: 3'-5' exoribonuclease 1 isoform X2 [Cor...	[more]
gi\|1095969811\|ref\|XP_018782279.1\|	1.219e-16	34.31	PREDICTED: 3'-5' exoribonuclease 1 isoform X2 [Ser...	[more]
gi\|426204660\|gb\|AFY13248.1\|	1.285e-16	31.76	ERI1 exoribonuclease 3-like protein, partial [Schi...	[more]
gi\|444516848\|gb\|ELV11300.1\|	2.368e-16	37.59	Tankyrase-1 [Tupaia chinensis]	[more]
gi\|573878111\|ref\|XP_006627290.1\|	1.309e-15	30.81	PREDICTED: 3'-5' exoribonuclease 1 [Lepisosteus oc...	[more]
gi\|929411239\|ref\|XP_014114881.1\|	1.748e-15	33.58	PREDICTED: 3'-5' exoribonuclease 1 isoform X2 [Pse...	[more]
gi\|348521266\|ref\|XP_003448147.1\|	2.178e-15	30.41	PREDICTED: 3'-5' exoribonuclease 1 [Oreochromis ni...	[more]
gi\|1042305084\|ref\|XP_017348954.1\|	3.529e-15	31.52	PREDICTED: 3'-5' exoribonuclease 1 [Ictalurus punc...	[more]
gi\|499046429\|ref\|XP_004573791.1\|	4.423e-15	30.41	PREDICTED: 3'-5' exoribonuclease 1 [Maylandia zebr...	[more]

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BLAST of EMLSAG00000013038 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s99	supercontig	LSalAtl2s99:536211..538448 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s99-snap-gene-5.21
Biotype	protein_coding
Evidence	IEA
Note	3'-5' exoribonuclease 1

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000013038 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000013038	EMLSAT00000013038-708885	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s99:536211..538448+

gene from alignment at LSalAtl2s99:536211..538448+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000013038-695804 ID=EMLSAG00000013038-695804|Name=EMLSAG00000013038|organism=Lepeophtheirus salmonis|type=gene|length=2238bp|location=Sequence derived from alignment at LSalAtl2s99:536211..538448+ (Lepeophtheirus salmonis)
ATGAAAAGTAAATTTACTACCCTTACAGCTAAGTTTCCTCCATTTTGGAA
AACAAAATATGTGGTATGATTAAAATTTTTGCAAGCACGTGATCTATTAT
TATCTAAAATTGGAGAAAACAAAAGCAAAAAATACTTGAAATCTCGTAAT
GATAAGGAAAGAACTTCCCATAATGGAACAAATCGAATTTTTAAATTATT
AGTAAGGATGTCATTTTTATAATGACAAAAATACGTATAGAAATCAGAAA
GGAAAAACGGTTGTTGCGTGTGCTCTTTATTCTTTTTTGTTTATTATTTA
TATGCTGTTTGTTAACTTCTCCCTCTAAAGTATGCATTATCTCGTATCTT
TGGTGTAAATTGTTTTAAAAATTCATGTACAAAATAAATATACATGAATC
TTAAAATAGTTTCAATGCGTTTCCTCTACTAATACTATTTTGAATGTTCT
TTTTGACATTAATTCATATTCTCCCCTCCCTCTAGGGAGTTTATAGTAAC
AAGGGTCGGAACTCAGTAATACCAAGTGTTTTCCCTCCATCATTTTTCTC
GCCCTCAATTTTTCTTTACAAAATGACATCCCTAATTGTCGAAGTAGAAT
ACTTTTGACTCTTTCAAGTTATTCGAACAATTAATACCTAAGATGATCTT
GAAAGAAGATGGAATGCCTTATTATATATAAGAGGTAGTGAGTTCGTCTC
TTATGGAGTATCATGAGGGGGGGGGGGGGTATGAGGTGTATTGAGGCTCT
TTCTTGTGTCTATCATGAATCATGAGAGTATTATTACTCTGAAGAGTACC
TTATACTATGATGCAAATAAAATATTAAAAGATGCCAATAATTAAATTTC
AATGTTCCGCTTTCACTGTCTGAAATTTTTAGACAGAAATGAAAATATGA
CGTGAAGTAAAAATTGTCAAACATGCTCCTAAATATATTTCAAAAATACT
AGTAATAAAGAATTAGATCATTTAGTCTTGTTATCAGGTACATATTTTTT
TTAATAATACCAAACTTTTTCCCCACAATTGCAATAATTTTAAAACACCT
AATACAAGATAAACTTGACCCTTTAATTAAACATTGATCTTAAGTAAATT
TTATTCTCTTATCAATTAAAATCTTTTCACAGACATTTAATATTTATTGA
TAAATAATATACATATGCTACCAATTAAAATATATTGATGGAATGTTAGT
AACAAATGATTAAATCTTGAGAATAATGAGTTATATAGGTCTATGTAGTT
TGTCCTTACAAACTTAAACGTAATTTGTTTATTAAAAGTTATAATAATAG
TTTCTTTTTATTTAATTGTAACGTATTGATGAAGCCATGCATATGCATAG
TAGATTCAATTTAAGACATTTCTTTGATTTTTTTTTTTGAAATAAGGTTT
TTTAATATGACTTTTTTTAGAAAATACTTTTTTGTAAGAAGGACATTCAT
AAGAATAGACCAAGTAATAGTGCGTGTATCCGACAAATAATCAAGATTTG
CAACCAACGGTAGTGTTGTGGTGAGGAGGAGATATTCCATCATGTCAAAT
AATGATGCAGGTGATACAAGTCACTATATATGCTGAGAGGCGGTCCTCCA
AAAACAAGTTTAAAAAGTCCATAAACGAATCTTTAGAACACAAGAGGTGG
CTCCTCCATGCCTCCAGAACAGCGGGAAACATACAAAGAAATTAGCAAAC
TGAATGGTTGTGTTGATCAAATGGCCATTCAAAAGTTAAAAATAGATGTA
AAGATATCAAAATTGACCCTTGTGGTCTTAATTATGTTGTGAGGCAGAGA
TTGAAGGAATATTATGAAAGAGAAAAGCTGGAGGAAGCGGGTCTGGCCAT
TAATCGCAATCTTCCCAATTTTCTTGTGATAGACATTGAAACAACATGTG
AAGAGCTTAATTATAGTAACTATAAACAGGAAATCATCGAGTTTCCCGCG
GTTTTGATATCATCTTGCACCGCTGAAGTCGTGAATACCTTTCATAAATA
AATTCGTTCTCTCATTAATGCAAATCTGAGTACCTTCTGCAAACATTTCC
CTGGGATTTTACAGAAAACAGTCAATGCAAGTGATCCTTTTTTAATAGTG
CATAAGAAATGTTTAATTTGGCTGGAGAATCATGGTTTAAGAAGTAAATA
TGCATTTAGTTTAGTAACATATGAAGGATTCCTCTATCTCCAACCCCGTC
AATCTTCCATTGCTTTTCCGGAATATGCCTCCAAATAA

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